Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:29:38 (523621): wrapper (7.7.26015): starting
17:29:38 (523621): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 17:29:38] Arguments: --nthreads 8
[2025-11-25 17:29:38] Threads: 8
[2025-11-25 17:29:38] Checking for CVMFS
[2025-11-25 17:29:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:29:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:29:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:29:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:29:38] 2.13.3.0 44796 29070 353624 153300 2 148 24840568 32947200 28750 16776704 0 114267396 99.468 157739750 35738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 17:29:38] CVMFS is ok
[2025-11-25 17:29:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:29:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:29:38] Further information can be found at the LHC@home message board.
[2025-11-25 17:29:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:29:38] Checking for apptainer binary...
[2025-11-25 17:29:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:29:38] Running /usr/bin/apptainer --version
[2025-11-25 17:29:38] apptainer version 1.4.4-1.el9
[2025-11-25 17:29:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:29:39] c6-6-8-2.aglt2.org
[2025-11-25 17:29:39] apptainer works
[2025-11-25 17:29:39] Set ATHENA_PROC_NUMBER=8
[2025-11-25 17:29:39] Set ATHENA_CORE_NUMBER=8
[2025-11-25 17:29:39] Starting ATLAS job with PandaID=6896420986
[2025-11-25 17:29:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 19:27:29]  *** The last 200 lines of the pilot log: ***
[2025-11-26 19:27:29] 2025-11-27 00:26:29,768 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 19:27:29] 2025-11-27 00:26:29,796 | INFO     | fitting pss+swap vs Time
[2025-11-26 19:27:29] 2025-11-27 00:26:29,798 | INFO     | sum of square deviations: 1110628068311.8003
[2025-11-26 19:27:29] 2025-11-27 00:26:29,849 | INFO     | sum of deviations: 4317950894951.0703
[2025-11-26 19:27:29] 2025-11-27 00:26:29,849 | INFO     | mean x: 1764156476.7267973
[2025-11-26 19:27:29] 2025-11-27 00:26:29,849 | INFO     | mean y: 2954701.9738562093
[2025-11-26 19:27:29] 2025-11-27 00:26:29,849 | INFO     | intersect: -6855814002.742182
[2025-11-26 19:27:29] 2025-11-27 00:26:29,851 | INFO     | chi2: 8.182887108560939
[2025-11-26 19:27:29] 2025-11-27 00:26:29,854 | INFO     | sum of square deviations: 1099776914569.5437
[2025-11-26 19:27:29] 2025-11-27 00:26:29,955 | INFO     | sum of deviations: 4830025082525.387
[2025-11-26 19:27:29] 2025-11-27 00:26:29,955 | INFO     | mean x: 1764156324.2367213
[2025-11-26 19:27:29] 2025-11-27 00:26:29,956 | INFO     | mean y: 2961896.957377049
[2025-11-26 19:27:29] 2025-11-27 00:26:29,956 | INFO     | intersect: -7744899676.309296
[2025-11-26 19:27:29] 2025-11-27 00:26:29,958 | INFO     | chi2: 5.1946797435299725
[2025-11-26 19:27:29] 2025-11-27 00:26:29,958 | INFO     | current chi2=5.1946797435299725 (change=36.5177635397744 %)
[2025-11-26 19:27:29] 2025-11-27 00:26:29,960 | INFO     | sum of square deviations: 1088996785286.9895
[2025-11-26 19:27:29] 2025-11-27 00:26:30,131 | INFO     | sum of deviations: 5273987825622.851
[2025-11-26 19:27:29] 2025-11-27 00:26:30,153 | INFO     | mean x: 1764156171.7473683
[2025-11-26 19:27:29] 2025-11-27 00:26:30,153 | INFO     | mean y: 2968174.3381578946
[2025-11-26 19:27:29] 2025-11-27 00:26:30,153 | INFO     | intersect: -8540801924.892266
[2025-11-26 19:27:29] 2025-11-27 00:26:30,155 | INFO     | chi2: 2.7660871435536296
[2025-11-26 19:27:29] 2025-11-27 00:26:30,156 | INFO     | current chi2=2.7660871435536296 (change=46.75153656972174 %)
[2025-11-26 19:27:29] 2025-11-27 00:26:30,164 | INFO     | sum of square deviations: 1078286984630.141
[2025-11-26 19:27:29] 2025-11-27 00:26:30,324 | INFO     | sum of deviations: 5387233458952.721
[2025-11-26 19:27:29] 2025-11-27 00:26:30,325 | INFO     | mean x: 1764156019.2554455
[2025-11-26 19:27:29] 2025-11-27 00:26:30,325 | INFO     | mean y: 2969784.912871287
[2025-11-26 19:27:29] 2025-11-27 00:26:30,325 | INFO     | intersect: -8810936410.018785
[2025-11-26 19:27:29] 2025-11-27 00:26:30,347 | INFO     | chi2: 2.4678522071358175
[2025-11-26 19:27:29] 2025-11-27 00:26:30,348 | INFO     | current chi2=2.4678522071358175 (change=10.781834444834793 %)
[2025-11-26 19:27:29] 2025-11-27 00:26:30,348 | INFO     | right removable region: 1514
[2025-11-26 19:27:29] 2025-11-27 00:26:30,350 | INFO     | sum of square deviations: 1099773996202.0662
[2025-11-26 19:27:29] 2025-11-27 00:26:30,552 | INFO     | sum of deviations: 3886638925931.6646
[2025-11-26 19:27:29] 2025-11-27 00:26:30,553 | INFO     | mean x: 1764156629.2373772
[2025-11-26 19:27:29] 2025-11-27 00:26:30,553 | INFO     | mean y: 2960757.255081967
[2025-11-26 19:27:29] 2025-11-27 00:26:30,553 | INFO     | intersect: -6231629122.40469
[2025-11-26 19:27:29] 2025-11-27 00:26:30,555 | INFO     | chi2: 5.923489366944911
[2025-11-26 19:27:29] 2025-11-27 00:26:30,555 | INFO     | current chi2=5.923489366944911 (change=27.61125396991296 %)
[2025-11-26 19:27:29] 2025-11-27 00:26:30,557 | INFO     | sum of square deviations: 1088991320806.958
[2025-11-26 19:27:29] 2025-11-27 00:26:30,706 | INFO     | sum of deviations: 3792702500867.6655
[2025-11-26 19:27:29] 2025-11-27 00:26:30,706 | INFO     | mean x: 1764156781.744737
[2025-11-26 19:27:29] 2025-11-27 00:26:30,706 | INFO     | mean y: 2962085.4888157896
[2025-11-26 19:27:29] 2025-11-27 00:26:30,706 | INFO     | intersect: -6141184070.8715925
[2025-11-26 19:27:29] 2025-11-27 00:26:30,708 | INFO     | chi2: 5.890345321258774
[2025-11-26 19:27:29] 2025-11-27 00:26:30,719 | INFO     | current chi2=5.890345321258774 (change=0.5595358349268218 %)
[2025-11-26 19:27:29] 2025-11-27 00:26:30,719 | INFO     | left removable region: 20
[2025-11-26 19:27:29] 2025-11-27 00:26:30,721 | INFO     | sum of square deviations: 1034062953420.5038
[2025-11-26 19:27:29] 2025-11-27 00:26:30,936 | INFO     | sum of deviations: 4728736516839.533
[2025-11-26 19:27:29] 2025-11-27 00:26:30,937 | INFO     | mean x: 1764156598.793842
[2025-11-26 19:27:29] 2025-11-27 00:26:30,937 | INFO     | mean y: 2979028.014725569
[2025-11-26 19:27:29] 2025-11-27 00:26:30,937 | INFO     | intersect: -8064452169.036859
[2025-11-26 19:27:29] 2025-11-27 00:26:30,939 | INFO     | chi2: 0.14597070615631128
[2025-11-26 19:27:29] 2025-11-27 00:26:30,939 | INFO     | current memory leak: 4.57 B/s (using 1494 data points, chi2=0.15)
[2025-11-26 19:27:29] 2025-11-27 00:26:30,965 | INFO     | could have reported an average CPU frequency of 2600 MHz (54 samples)
[2025-11-26 19:27:29] 2025-11-27 00:26:30,965 | INFO     | ..............................
[2025-11-26 19:27:29] 2025-11-27 00:26:30,965 | INFO     | . Timing measurements:
[2025-11-26 19:27:29] 2025-11-27 00:26:30,965 | INFO     | . get job = 0 s
[2025-11-26 19:27:29] 2025-11-27 00:26:30,965 | INFO     | . initial setup = 3 s
[2025-11-26 19:27:29] 2025-11-27 00:26:30,965 | INFO     | . payload setup = 9 s
[2025-11-26 19:27:29] 2025-11-27 00:26:30,965 | INFO     | . stage-in = 0 s
[2025-11-26 19:27:29] 2025-11-27 00:26:30,965 | INFO     | . payload execution = 93304 s
[2025-11-26 19:27:29] 2025-11-27 00:26:30,966 | INFO     | . stage-out = 12 s
[2025-11-26 19:27:29] 2025-11-27 00:26:30,966 | INFO     | . log creation = 2 s
[2025-11-26 19:27:29] 2025-11-27 00:26:30,966 | INFO     | ..............................
[2025-11-26 19:27:29] 2025-11-27 00:26:31,513 | INFO     | time since job start (93389s) is within the limit (172800.0s)
[2025-11-26 19:27:29] 2025-11-27 00:26:31,541 | INFO     | 
[2025-11-26 19:27:29] 2025-11-27 00:26:31,541 | INFO     | job summary report
[2025-11-26 19:27:29] 2025-11-27 00:26:31,541 | INFO     | --------------------------------------------------
[2025-11-26 19:27:29] 2025-11-27 00:26:31,541 | INFO     | PanDA job id: 6896420986
[2025-11-26 19:27:29] 2025-11-27 00:26:31,542 | INFO     | task id: 47556149
[2025-11-26 19:27:29] 2025-11-27 00:26:31,542 | INFO     | errors: (none)
[2025-11-26 19:27:29] 2025-11-27 00:26:31,542 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 19:27:29] 2025-11-27 00:26:31,542 | INFO     | pilot state: finished 
[2025-11-26 19:27:29] 2025-11-27 00:26:31,542 | INFO     | transexitcode: 0
[2025-11-26 19:27:29] 2025-11-27 00:26:31,542 | INFO     | exeerrorcode: 0
[2025-11-26 19:27:29] 2025-11-27 00:26:31,542 | INFO     | exeerrordiag: 
[2025-11-26 19:27:29] 2025-11-27 00:26:31,542 | INFO     | exitcode: 0
[2025-11-26 19:27:29] 2025-11-27 00:26:31,542 | INFO     | exitmsg: OK
[2025-11-26 19:27:29] 2025-11-27 00:26:31,542 | INFO     | cpuconsumptiontime: 271374 s
[2025-11-26 19:27:29] 2025-11-27 00:26:31,542 | INFO     | nevents: 1000
[2025-11-26 19:27:29] 2025-11-27 00:26:31,542 | INFO     | neventsw: 0
[2025-11-26 19:27:29] 2025-11-27 00:26:31,542 | INFO     | pid: 550779
[2025-11-26 19:27:29] 2025-11-27 00:26:31,543 | INFO     | pgrp: 550779
[2025-11-26 19:27:29] 2025-11-27 00:26:31,543 | INFO     | corecount: 8
[2025-11-26 19:27:29] 2025-11-27 00:26:31,543 | INFO     | event service: False
[2025-11-26 19:27:29] 2025-11-27 00:26:31,543 | INFO     | sizes: {0: 2284143, 1: 2284342, 10: 2284604, 12: 2284632, 93318: 2351934, 93320: 2351933, 93334: 2361111, 93335: 2361167, 93368: 2361413}
[2025-11-26 19:27:29] 2025-11-27 00:26:31,543 | INFO     | --------------------------------------------------
[2025-11-26 19:27:29] 2025-11-27 00:26:31,543 | INFO     | 
[2025-11-26 19:27:29] 2025-11-27 00:26:31,543 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 19:27:29] 2025-11-27 00:26:31,691 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,691 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,691 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,691 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,691 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,693 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 19:27:29] 2025-11-27 00:26:31,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,693 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 19:27:29] 2025-11-27 00:26:31,693 | INFO     | job 6896420986 has completed (purged errors)
[2025-11-26 19:27:29] 2025-11-27 00:26:31,693 | INFO     | overall cleanup function is called
[2025-11-26 19:27:29] 2025-11-27 00:26:32,751 | INFO     | --- collectZombieJob: --- 10, [550779]
[2025-11-26 19:27:29] 2025-11-27 00:26:32,752 | INFO     | zombie collector waiting for pid 550779
[2025-11-26 19:27:29] 2025-11-27 00:26:32,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 19:27:29] 2025-11-27 00:26:32,752 | INFO     | collected zombie processes
[2025-11-26 19:27:29] 2025-11-27 00:26:32,752 | INFO     | will attempt to kill all subprocesses of pid=550779
[2025-11-26 19:27:29] 2025-11-27 00:26:34,733 | INFO     | process IDs to be killed: [550779] (in reverse order)
[2025-11-26 19:27:29] 2025-11-27 00:26:34,938 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 19:27:29] 2025-11-27 00:26:34,939 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 19:27:29] 2025-11-27 00:26:34,984 | INFO     | did not find any defunct processes belonging to 550779
[2025-11-26 19:27:29] 2025-11-27 00:26:35,026 | INFO     | did not find any defunct processes belonging to 550779
[2025-11-26 19:27:29] 2025-11-27 00:26:35,027 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 19:27:29] 2025-11-27 00:26:35,028 | INFO     | ready for new job
[2025-11-26 19:27:29] 2025-11-27 00:26:35,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 19:27:29] 2025-11-27 00:26:35,044 | INFO     | ***************************************
[2025-11-26 19:27:29] 2025-11-27 00:26:35,044 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 19:27:29] 2025-11-27 00:26:35,044 | INFO     | ***************************************
[2025-11-26 19:27:29] 2025-11-27 00:26:35,044 | INFO     | 
[2025-11-26 19:27:29] 2025-11-27 00:26:35,058 | INFO     | architecture information:
[2025-11-26 19:27:29] 2025-11-27 00:26:35,067 | INFO     | executing command: cat /etc/os-release
[2025-11-26 19:27:29] 2025-11-27 00:26:35,114 | INFO     | cat /etc/os-release:
[2025-11-26 19:27:29] NAME="CentOS Linux"
[2025-11-26 19:27:29] VERSION="7 (Core)"
[2025-11-26 19:27:29] ID="centos"
[2025-11-26 19:27:29] ID_LIKE="rhel fedora"
[2025-11-26 19:27:29] VERSION_ID="7"
[2025-11-26 19:27:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 19:27:29] ANSI_COLOR="0;31"
[2025-11-26 19:27:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 19:27:29] HOME_URL="https://www.centos.org/"
[2025-11-26 19:27:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 19:27:29] 
[2025-11-26 19:27:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 19:27:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 19:27:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 19:27:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 19:27:29] 
[2025-11-26 19:27:29] 2025-11-27 00:26:35,114 | INFO     | ***************************************
[2025-11-26 19:27:29] 2025-11-27 00:26:35,635 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 19:27:29] 2025-11-27 00:26:35,746 | INFO     | sufficient remaining disk space (67342696448 B)
[2025-11-26 19:27:29] 2025-11-27 00:26:35,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 19:27:29] 2025-11-27 00:26:35,746 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 19:27:29] 2025-11-27 00:26:35,747 | INFO     | update_server=False
[2025-11-26 19:27:29] 2025-11-27 00:26:35,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 19:27:29] 2025-11-27 00:26:35,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:27:29] 2025-11-27 00:26:35,747 | INFO     | aborting loop
[2025-11-26 19:27:29] 2025-11-27 00:26:35,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 19:27:29] 2025-11-27 00:26:35,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 19:27:29] 2025-11-27 00:26:35,913 | INFO     | all job control threads have been joined
[2025-11-26 19:27:29] 2025-11-27 00:26:36,137 | INFO     | all payload control threads have been joined
[2025-11-26 19:27:29] 2025-11-27 00:26:36,528 | INFO     | all data control threads have been joined
[2025-11-26 19:27:29] 2025-11-27 00:26:36,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:27:29] 2025-11-27 00:26:36,755 | INFO     | [job] retrieve thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:36,755 | INFO     | [job] job monitor thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:36,884 | INFO     | [payload] failed_post thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:36,920 | INFO     | [job] control thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:37,086 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:37,086 | INFO     | [data] copytool_in thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:37,095 | INFO     | [job] validate thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:37,095 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:37,144 | INFO     | [payload] control thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:37,340 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:37,477 | INFO     | [payload] validate_post thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:37,534 | INFO     | [data] control thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:37,548 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:37,579 | INFO     | [job] queue monitor thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:37,756 | INFO     | [data] copytool_out thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:39,839 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 19:27:29] 2025-11-27 00:26:53,171 | INFO     | [monitor] cgroup control has ended
[2025-11-26 19:27:29] 2025-11-27 00:26:54,503 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501209651008)>', '<ExcThread(monitor, started 140500728280832)>']
[2025-11-26 19:27:29] 2025-11-27 00:26:59,535 | INFO     | all workflow threads have been joined
[2025-11-26 19:27:29] 2025-11-27 00:26:59,536 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 19:27:29] 2025-11-27 00:26:59,536 | INFO     | traces error code: 0
[2025-11-26 19:27:29] 2025-11-27 00:26:59,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 19:27:29] 2025-11-27 00:27:07,165 | INFO     | PID=535977 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 19:27:29] 2025-11-27 00:27:07,165 | INFO     | .. there are 40 such processes running
[2025-11-26 19:27:29] 2025-11-27 00:27:07,165 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 19:27:29] 2025-11-27 00:27:07,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 19:27:29] 2025-11-27 00:27:07,165 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 19:27:29] 2025-11-27 00:27:07,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 19:27:29] 2025-11-27 00:27:07,165 | INFO     | [monitor] control thread has ended
[2025-11-26 19:27:29] 2025-11-27 00:27:08,109 [wrapper] ==== pilot stdout END ====
[2025-11-26 19:27:29] 2025-11-27 00:27:08,134 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 19:27:29] 2025-11-27 00:27:08,160 [wrapper] pilotpid: 535977
[2025-11-26 19:27:29] 2025-11-27 00:27:08,182 [wrapper] Pilot exit status: 0
[2025-11-26 19:27:29] 2025-11-27 00:27:08,263 [wrapper] pandaids: 6896420986
[2025-11-26 19:27:29] 2025-11-27 00:27:08,597 [wrapper] cleanup supervisor_pilot 1764775 535978
[2025-11-26 19:27:29] 2025-11-27 00:27:08,625 [wrapper] Test setup, not cleaning
[2025-11-26 19:27:29] 2025-11-27 00:27:08,647 [wrapper] apfmon messages muted
[2025-11-26 19:27:29] 2025-11-27 00:27:08,676 [wrapper] ==== wrapper stdout END ====
[2025-11-26 19:27:29] 2025-11-27 00:27:08,695 [wrapper] ==== wrapper stderr END ====
[2025-11-26 19:27:29]  *** Error codes and diagnostics ***
[2025-11-26 19:27:29]     "exeErrorCode": 0,
[2025-11-26 19:27:29]     "exeErrorDiag": "",
[2025-11-26 19:27:29]     "pilotErrorCode": 0,
[2025-11-26 19:27:29]     "pilotErrorDiag": "",
[2025-11-26 19:27:29]  *** Listing of results directory ***
[2025-11-26 19:27:29] total 1324908
[2025-11-26 19:27:29] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 22:04 pilot3.tar.gz
[2025-11-26 19:27:29] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 22:23 queuedata.json
[2025-11-26 19:27:29] -rwx------ 1 boincer umatlas     36292 Nov 24 22:24 runpilot2-wrapper.sh
[2025-11-26 19:27:29] -rw-r--r-- 1 boincer umatlas       100 Nov 25 17:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 19:27:29] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 17:29 run_atlas
[2025-11-26 19:27:29] -rw-r--r-- 1 boincer umatlas       105 Nov 25 17:29 job.xml
[2025-11-26 19:27:29] -rw-r--r-- 2 boincer umatlas 408436752 Nov 25 17:29 EVNT.47483658._001488.pool.root.1
[2025-11-26 19:27:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 17:29 start_atlas.sh
[2025-11-26 19:27:29] drwxrwx--x 2 boincer umatlas      4096 Nov 25 17:29 shared
[2025-11-26 19:27:29] -rw-r--r-- 2 boincer umatlas    590107 Nov 25 17:29 input.tar.gz
[2025-11-26 19:27:29] -rw-r--r-- 1 boincer umatlas         0 Nov 25 17:29 boinc_lockfile
[2025-11-26 19:27:29] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 17:29 pandaJob.out
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas        57 Nov 25 17:29 setup.sh.local
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas    991877 Nov 25 17:29 agis_schedconf.cvmfs.json
[2025-11-26 19:27:29] drwx------ 5 boincer umatlas      4096 Nov 25 17:30 pilot3
[2025-11-26 19:27:29] -rw-r--r-- 1 boincer umatlas       533 Nov 26 19:10 boinc_task_state.xml
[2025-11-26 19:27:29] -rw-r--r-- 1 boincer umatlas      6879 Nov 26 19:20 init_data.xml
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas 917175246 Nov 26 19:24 HITS.47556149._004748.pool.root.1
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas      1059 Nov 26 19:25 memory_monitor_summary.json
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas   1516240 Nov 26 19:25 agis_ddmendpoints.agis.ALL.json
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas   2464955 Nov 26 19:25 log.47556149._004748.job.log.tgz.1
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas        95 Nov 26 19:26 pilot_heartbeat.json
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas      8616 Nov 26 19:26 heartbeat.json
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas       822 Nov 26 19:27 pilotlog.txt
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas  11119844 Nov 26 19:27 log.47556149._004748.job.log.1
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas       353 Nov 26 19:27 output.list
[2025-11-26 19:27:29] -rw-r--r-- 1 boincer umatlas       620 Nov 26 19:27 runtime_log
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas  13608960 Nov 26 19:27 result.tar.gz
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas       660 Nov 26 19:27 myULDmdqyh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5HJKDma6k0Bn.diag
[2025-11-26 19:27:29] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 19:27 runtime_log.err
[2025-11-26 19:27:29] -rw-r--r-- 1 boincer umatlas        29 Nov 26 19:27 wrapper_checkpoint.txt
[2025-11-26 19:27:29] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 19:27 boinc_mmap_file
[2025-11-26 19:27:29] -rw-r--r-- 1 boincer umatlas     21153 Nov 26 19:27 stderr.txt
[2025-11-26 19:27:29] HITS file was successfully produced:
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas 917175246 Nov 26 19:24 shared/HITS.pool.root.1
[2025-11-26 19:27:29]  *** Contents of shared directory: ***
[2025-11-26 19:27:29] total 1308444
[2025-11-26 19:27:29] -rw-r--r-- 2 boincer umatlas 408436752 Nov 25 17:29 ATLAS.root_0
[2025-11-26 19:27:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 17:29 start_atlas.sh
[2025-11-26 19:27:29] -rw-r--r-- 2 boincer umatlas    590107 Nov 25 17:29 input.tar.gz
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas 917175246 Nov 26 19:24 HITS.pool.root.1
[2025-11-26 19:27:29] -rw------- 1 boincer umatlas  13608960 Nov 26 19:27 result.tar.gz
19:27:31 (523621): run_atlas exited; CPU time 275025.417543
19:27:31 (523621): called boinc_finish(0)

</stderr_txt>
]]>

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