Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:23:50 (10330): wrapper (7.7.26015): starting
17:23:50 (10330): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 17:23:50] Arguments: --nthreads 8
[2025-11-25 17:23:50] Threads: 8
[2025-11-25 17:23:50] Checking for CVMFS
[2025-11-25 17:23:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:23:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:23:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:23:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:23:51] 2.11.2.0 2918 141641 89160 153300 1 81 16986345 20275200 1 130560 0 52992980 99.934 6457632 35159 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 17:23:51] CVMFS is ok
[2025-11-25 17:23:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:23:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:23:51] Further information can be found at the LHC@home message board.
[2025-11-25 17:23:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:23:51] Checking for apptainer binary...
[2025-11-25 17:23:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:23:51] Running /usr/bin/apptainer --version
[2025-11-25 17:23:51] apptainer version 1.3.2-1.el7
[2025-11-25 17:23:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:23:53] c-115-8.aglt2.org
[2025-11-25 17:23:53] apptainer works
[2025-11-25 17:23:53] Set ATHENA_PROC_NUMBER=8
[2025-11-25 17:23:53] Set ATHENA_CORE_NUMBER=8
[2025-11-25 17:23:53] Starting ATLAS job with PandaID=6896420968
[2025-11-25 17:23:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 04:34:23]  *** The last 200 lines of the pilot log: ***
[2025-11-26 04:34:23] 2025-11-26 09:33:47,993 | INFO     | time since job start (40177s) is within the limit (172800.0s)
[2025-11-26 04:34:23] 2025-11-26 09:33:48,455 | INFO     | monitor loop #2964: job 0:6896420968 is in state 'finished'
[2025-11-26 04:34:23] 2025-11-26 09:33:48,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:34:23] 2025-11-26 09:33:49,998 | INFO     | time since job start (40179s) is within the limit (172800.0s)
[2025-11-26 04:34:23] 2025-11-26 09:33:50,138 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 04:34:23] 2025-11-26 09:33:50,141 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-26 04:34:23] 2025-11-26 09:33:50,143 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896420968/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 04:34:23] 2025-11-26 09:33:50,143 | INFO     | extracted standard info from prmon json
[2025-11-26 04:34:23] 2025-11-26 09:33:50,143 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 04:34:23] 2025-11-26 09:33:50,143 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 04:34:23] 2025-11-26 09:33:50,154 | INFO     | fitting pss+swap vs Time
[2025-11-26 04:34:23] 2025-11-26 09:33:50,154 | INFO     | sum of square deviations: 88338766196.01967
[2025-11-26 04:34:23] 2025-11-26 09:33:50,163 | INFO     | sum of deviations: 637562209661.4729
[2025-11-26 04:34:23] 2025-11-26 09:33:50,163 | INFO     | mean x: 1764129521.1291792
[2025-11-26 04:34:23] 2025-11-26 09:33:50,163 | INFO     | mean y: 3120195.782674772
[2025-11-26 04:34:23] 2025-11-26 09:33:50,163 | INFO     | intersect: -12729028599.734844
[2025-11-26 04:34:23] 2025-11-26 09:33:50,164 | INFO     | chi2: 5.92426237568894
[2025-11-26 04:34:23] 2025-11-26 09:33:50,164 | INFO     | sum of square deviations: 86340334061.52551
[2025-11-26 04:34:23] 2025-11-26 09:33:50,172 | INFO     | sum of deviations: 873814824038.3813
[2025-11-26 04:34:23] 2025-11-26 09:33:50,173 | INFO     | mean x: 1764129368.633997
[2025-11-26 04:34:23] 2025-11-26 09:33:50,173 | INFO     | mean y: 3138218.6584992344
[2025-11-26 04:34:23] 2025-11-26 09:33:50,173 | INFO     | intersect: -17850885750.43315
[2025-11-26 04:34:23] 2025-11-26 09:33:50,173 | INFO     | chi2: 2.7651633054946863
[2025-11-26 04:34:23] 2025-11-26 09:33:50,174 | INFO     | current chi2=2.7651633054946863 (change=53.32476635670408 %)
[2025-11-26 04:34:23] 2025-11-26 09:33:50,174 | INFO     | sum of square deviations: 84372274589.5002
[2025-11-26 04:34:23] 2025-11-26 09:33:50,182 | INFO     | sum of deviations: 910958757967.4156
[2025-11-26 04:34:23] 2025-11-26 09:33:50,182 | INFO     | mean x: 1764129216.1388888
[2025-11-26 04:34:23] 2025-11-26 09:33:50,182 | INFO     | mean y: 3141080.7731481483
[2025-11-26 04:34:23] 2025-11-26 09:33:50,182 | INFO     | intersect: -19043980351.55462
[2025-11-26 04:34:23] 2025-11-26 09:33:50,183 | INFO     | chi2: 2.5141247092907664
[2025-11-26 04:34:23] 2025-11-26 09:33:50,183 | INFO     | current chi2=2.5141247092907664 (change=9.078617371533838 %)
[2025-11-26 04:34:23] 2025-11-26 09:33:50,183 | INFO     | right removable region: 647
[2025-11-26 04:34:23] 2025-11-26 09:33:50,184 | INFO     | sum of square deviations: 86340081521.52548
[2025-11-26 04:34:23] 2025-11-26 09:33:50,192 | INFO     | sum of deviations: 438856971026.3471
[2025-11-26 04:34:23] 2025-11-26 09:33:50,192 | INFO     | mean x: 1764129673.633997
[2025-11-26 04:34:23] 2025-11-26 09:33:50,192 | INFO     | mean y: 3135328.0474732006
[2025-11-26 04:34:23] 2025-11-26 09:33:50,192 | INFO     | intersect: -8963738358.256584
[2025-11-26 04:34:23] 2025-11-26 09:33:50,193 | INFO     | chi2: 3.5545359724668804
[2025-11-26 04:34:23] 2025-11-26 09:33:50,193 | INFO     | current chi2=3.5545359724668804 (change=40.00036212012776 %)
[2025-11-26 04:34:23] 2025-11-26 09:33:50,194 | INFO     | sum of square deviations: 84371929086.5865
[2025-11-26 04:34:23] 2025-11-26 09:33:50,202 | INFO     | sum of deviations: 397013136476.83386
[2025-11-26 04:34:23] 2025-11-26 09:33:50,202 | INFO     | mean x: 1764129826.132716
[2025-11-26 04:34:23] 2025-11-26 09:33:50,202 | INFO     | mean y: 3138568.5833333335
[2025-11-26 04:34:23] 2025-11-26 09:33:50,202 | INFO     | intersect: -8297995742.409071
[2025-11-26 04:34:23] 2025-11-26 09:33:50,203 | INFO     | chi2: 3.5070102291454757
[2025-11-26 04:34:23] 2025-11-26 09:33:50,203 | INFO     | current chi2=3.5070102291454757 (change=1.337044938904399 %)
[2025-11-26 04:34:23] 2025-11-26 09:33:50,203 | INFO     | left removable region: 20
[2025-11-26 04:34:23] 2025-11-26 09:33:50,204 | INFO     | sum of square deviations: 76432306452.81612
[2025-11-26 04:34:23] 2025-11-26 09:33:50,211 | INFO     | sum of deviations: 623853695842.8279
[2025-11-26 04:34:23] 2025-11-26 09:33:50,211 | INFO     | mean x: 1764129795.6379585
[2025-11-26 04:34:23] 2025-11-26 09:33:50,211 | INFO     | mean y: 3163480.990430622
[2025-11-26 04:34:23] 2025-11-26 09:33:50,211 | INFO     | intersect: -14395968823.548882
[2025-11-26 04:34:23] 2025-11-26 09:33:50,212 | INFO     | chi2: 0.05685519512658314
[2025-11-26 04:34:23] 2025-11-26 09:33:50,212 | INFO     | current memory leak: 8.16 B/s (using 627 data points, chi2=0.06)
[2025-11-26 04:34:23] 2025-11-26 09:33:50,212 | INFO     | could have reported an average CPU frequency of 2371 MHz (26 samples)
[2025-11-26 04:34:23] 2025-11-26 09:33:50,213 | INFO     | ..............................
[2025-11-26 04:34:23] 2025-11-26 09:33:50,213 | INFO     | . Timing measurements:
[2025-11-26 04:34:23] 2025-11-26 09:33:50,213 | INFO     | . get job = 0 s
[2025-11-26 04:34:23] 2025-11-26 09:33:50,213 | INFO     | . initial setup = 2 s
[2025-11-26 04:34:23] 2025-11-26 09:33:50,213 | INFO     | . payload setup = 8 s
[2025-11-26 04:34:23] 2025-11-26 09:33:50,213 | INFO     | . stage-in = 0 s
[2025-11-26 04:34:23] 2025-11-26 09:33:50,213 | INFO     | . payload execution = 40134 s
[2025-11-26 04:34:23] 2025-11-26 09:33:50,213 | INFO     | . stage-out = 3 s
[2025-11-26 04:34:23] 2025-11-26 09:33:50,214 | INFO     | . log creation = 0 s
[2025-11-26 04:34:23] 2025-11-26 09:33:50,214 | INFO     | ..............................
[2025-11-26 04:34:23] 2025-11-26 09:33:50,293 | INFO     | 
[2025-11-26 04:34:23] 2025-11-26 09:33:50,293 | INFO     | job summary report
[2025-11-26 04:34:23] 2025-11-26 09:33:50,293 | INFO     | --------------------------------------------------
[2025-11-26 04:34:23] 2025-11-26 09:33:50,293 | INFO     | PanDA job id: 6896420968
[2025-11-26 04:34:23] 2025-11-26 09:33:50,294 | INFO     | task id: 47556149
[2025-11-26 04:34:23] 2025-11-26 09:33:50,294 | INFO     | errors: (none)
[2025-11-26 04:34:23] 2025-11-26 09:33:50,294 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 04:34:23] 2025-11-26 09:33:50,294 | INFO     | pilot state: finished 
[2025-11-26 04:34:23] 2025-11-26 09:33:50,294 | INFO     | transexitcode: 0
[2025-11-26 04:34:23] 2025-11-26 09:33:50,294 | INFO     | exeerrorcode: 0
[2025-11-26 04:34:23] 2025-11-26 09:33:50,294 | INFO     | exeerrordiag: 
[2025-11-26 04:34:23] 2025-11-26 09:33:50,294 | INFO     | exitcode: 0
[2025-11-26 04:34:23] 2025-11-26 09:33:50,295 | INFO     | exitmsg: OK
[2025-11-26 04:34:23] 2025-11-26 09:33:50,295 | INFO     | cpuconsumptiontime: 312165 s
[2025-11-26 04:34:23] 2025-11-26 09:33:50,295 | INFO     | nevents: 1000
[2025-11-26 04:34:23] 2025-11-26 09:33:50,295 | INFO     | neventsw: 0
[2025-11-26 04:34:23] 2025-11-26 09:33:50,295 | INFO     | pid: 20560
[2025-11-26 04:34:23] 2025-11-26 09:33:50,295 | INFO     | pgrp: 20560
[2025-11-26 04:34:23] 2025-11-26 09:33:50,295 | INFO     | corecount: 8
[2025-11-26 04:34:23] 2025-11-26 09:33:50,295 | INFO     | event service: False
[2025-11-26 04:34:23] 2025-11-26 09:33:50,296 | INFO     | sizes: {0: 2284315, 6: 2284577, 11: 2284605, 40147: 2328282, 40152: 2337276, 40154: 2337332, 40162: 2337706}
[2025-11-26 04:34:23] 2025-11-26 09:33:50,296 | INFO     | --------------------------------------------------
[2025-11-26 04:34:23] 2025-11-26 09:33:50,296 | INFO     | 
[2025-11-26 04:34:23] 2025-11-26 09:33:50,296 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 04:34:23] 2025-11-26 09:33:50,323 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,324 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,324 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,324 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,324 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,325 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,325 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 04:34:23] 2025-11-26 09:33:50,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 04:34:23] 2025-11-26 09:33:50,328 | INFO     | job 6896420968 has completed (purged errors)
[2025-11-26 04:34:23] 2025-11-26 09:33:50,328 | INFO     | overall cleanup function is called
[2025-11-26 04:34:23] 2025-11-26 09:33:51,343 | INFO     | --- collectZombieJob: --- 10, [20560]
[2025-11-26 04:34:23] 2025-11-26 09:33:51,343 | INFO     | zombie collector waiting for pid 20560
[2025-11-26 04:34:23] 2025-11-26 09:33:51,344 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 04:34:23] 2025-11-26 09:33:51,344 | INFO     | collected zombie processes
[2025-11-26 04:34:23] 2025-11-26 09:33:51,344 | INFO     | will attempt to kill all subprocesses of pid=20560
[2025-11-26 04:34:23] 2025-11-26 09:33:51,432 | INFO     | process IDs to be killed: [20560] (in reverse order)
[2025-11-26 04:34:23] 2025-11-26 09:33:51,487 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 04:34:23] 2025-11-26 09:33:51,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 04:34:23] 2025-11-26 09:33:51,492 | INFO     | did not find any defunct processes belonging to 20560
[2025-11-26 04:34:23] 2025-11-26 09:33:51,495 | INFO     | did not find any defunct processes belonging to 20560
[2025-11-26 04:34:23] 2025-11-26 09:33:51,497 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 04:34:23] 2025-11-26 09:33:51,498 | INFO     | ready for new job
[2025-11-26 04:34:23] 2025-11-26 09:33:51,498 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 04:34:23] 2025-11-26 09:33:51,501 | INFO     | ***************************************
[2025-11-26 04:34:23] 2025-11-26 09:33:51,501 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 04:34:23] 2025-11-26 09:33:51,501 | INFO     | ***************************************
[2025-11-26 04:34:23] 2025-11-26 09:33:51,501 | INFO     | 
[2025-11-26 04:34:23] 2025-11-26 09:33:51,502 | INFO     | architecture information:
[2025-11-26 04:34:23] 2025-11-26 09:33:51,502 | INFO     | executing command: cat /etc/os-release
[2025-11-26 04:34:23] 2025-11-26 09:33:51,521 | INFO     | cat /etc/os-release:
[2025-11-26 04:34:23] NAME="CentOS Linux"
[2025-11-26 04:34:23] VERSION="7 (Core)"
[2025-11-26 04:34:23] ID="centos"
[2025-11-26 04:34:23] ID_LIKE="rhel fedora"
[2025-11-26 04:34:23] VERSION_ID="7"
[2025-11-26 04:34:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 04:34:23] ANSI_COLOR="0;31"
[2025-11-26 04:34:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 04:34:23] HOME_URL="https://www.centos.org/"
[2025-11-26 04:34:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 04:34:23] 
[2025-11-26 04:34:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 04:34:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 04:34:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 04:34:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 04:34:23] 
[2025-11-26 04:34:23] 2025-11-26 09:33:51,521 | INFO     | ***************************************
[2025-11-26 04:34:23] 2025-11-26 09:33:52,025 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 04:34:23] 2025-11-26 09:33:52,047 | INFO     | sufficient remaining disk space (17468227584 B)
[2025-11-26 04:34:23] 2025-11-26 09:33:52,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 04:34:23] 2025-11-26 09:33:52,048 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 04:34:23] 2025-11-26 09:33:52,048 | INFO     | update_server=False
[2025-11-26 04:34:23] 2025-11-26 09:33:52,048 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 04:34:23] 2025-11-26 09:33:52,049 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:34:23] 2025-11-26 09:33:52,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:34:23] 2025-11-26 09:33:52,049 | INFO     | aborting loop
[2025-11-26 04:34:23] 2025-11-26 09:33:52,663 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 04:34:23] 2025-11-26 09:33:52,722 | INFO     | all data control threads have been joined
[2025-11-26 04:34:23] 2025-11-26 09:33:52,796 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 04:34:23] 2025-11-26 09:33:53,054 | INFO     | [job] retrieve thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:53,055 | INFO     | [job] queue monitor thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:53,055 | INFO     | [job] job monitor thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:53,182 | INFO     | [payload] validate_post thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:53,223 | INFO     | [data] copytool_in thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:53,228 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:53,323 | INFO     | all payload control threads have been joined
[2025-11-26 04:34:23] 2025-11-26 09:33:53,355 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:53,498 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:53,524 | INFO     | all job control threads have been joined
[2025-11-26 04:34:23] 2025-11-26 09:33:53,707 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:53,727 | INFO     | [data] control thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:54,150 | INFO     | [job] validate thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:54,177 | INFO     | [payload] failed_post thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:54,328 | INFO     | [payload] control thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:54,530 | INFO     | [job] control thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:54,669 | INFO     | [data] copytool_out thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:33:56,802 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 04:34:23] 2025-11-26 09:34:16,638 | INFO     | [monitor] cgroup control has ended
[2025-11-26 04:34:23] 2025-11-26 09:34:16,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160586987328)>', '<ExcThread(monitor, started 140160016578304)>']
[2025-11-26 04:34:23] 2025-11-26 09:34:21,858 | INFO     | all workflow threads have been joined
[2025-11-26 04:34:23] 2025-11-26 09:34:21,858 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 04:34:23] 2025-11-26 09:34:21,859 | INFO     | traces error code: 0
[2025-11-26 04:34:23] 2025-11-26 09:34:21,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 04:34:23] 2025-11-26 09:34:23,222 | INFO     | PID=14070 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 04:34:23] 2025-11-26 09:34:23,223 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 04:34:23] 2025-11-26 09:34:23,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 04:34:23] 2025-11-26 09:34:23,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 04:34:23] 2025-11-26 09:34:23,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 04:34:23] 2025-11-26 09:34:23,224 | INFO     | [monitor] control thread has ended
[2025-11-26 04:34:23] 2025-11-26 09:34:23,343 [wrapper] ==== pilot stdout END ====
[2025-11-26 04:34:23] 2025-11-26 09:34:23,347 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 04:34:23] 2025-11-26 09:34:23,352 [wrapper] pilotpid: 14070
[2025-11-26 04:34:23] 2025-11-26 09:34:23,356 [wrapper] Pilot exit status: 0
[2025-11-26 04:34:23] 2025-11-26 09:34:23,373 [wrapper] pandaids: 6896420968
[2025-11-26 04:34:23] 2025-11-26 09:34:23,413 [wrapper] cleanup supervisor_pilot 19587 14071
[2025-11-26 04:34:23] 2025-11-26 09:34:23,418 [wrapper] Test setup, not cleaning
[2025-11-26 04:34:23] 2025-11-26 09:34:23,422 [wrapper] apfmon messages muted
[2025-11-26 04:34:23] 2025-11-26 09:34:23,427 [wrapper] ==== wrapper stdout END ====
[2025-11-26 04:34:23] 2025-11-26 09:34:23,431 [wrapper] ==== wrapper stderr END ====
[2025-11-26 04:34:23]  *** Error codes and diagnostics ***
[2025-11-26 04:34:23]     "exeErrorCode": 0,
[2025-11-26 04:34:23]     "exeErrorDiag": "",
[2025-11-26 04:34:23]     "pilotErrorCode": 0,
[2025-11-26 04:34:23]     "pilotErrorDiag": "",
[2025-11-26 04:34:23]  *** Listing of results directory ***
[2025-11-26 04:34:23] total 1317796
[2025-11-26 04:34:23] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 22:04 pilot3.tar.gz
[2025-11-26 04:34:23] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 22:17 queuedata.json
[2025-11-26 04:34:23] -rwx------ 1 boincer umatlas     36292 Nov 24 22:17 runpilot2-wrapper.sh
[2025-11-26 04:34:23] -rw-r--r-- 1 boincer umatlas       100 Nov 25 17:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 04:34:23] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 17:23 run_atlas
[2025-11-26 04:34:23] -rw-r--r-- 1 boincer umatlas       105 Nov 25 17:23 job.xml
[2025-11-26 04:34:23] -rw-r--r-- 2 boincer umatlas 409621181 Nov 25 17:23 EVNT.47483658._001486.pool.root.1
[2025-11-26 04:34:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 17:23 start_atlas.sh
[2025-11-26 04:34:23] drwxrwx--x 2 boincer umatlas      4096 Nov 25 17:23 shared
[2025-11-26 04:34:23] -rw-r--r-- 2 boincer umatlas    590107 Nov 25 17:23 input.tar.gz
[2025-11-26 04:34:23] -rw-r--r-- 1 boincer umatlas         0 Nov 25 17:23 boinc_lockfile
[2025-11-26 04:34:23] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 17:23 pandaJob.out
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas        57 Nov 25 17:23 setup.sh.local
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas    991877 Nov 25 17:24 agis_schedconf.cvmfs.json
[2025-11-26 04:34:23] drwx------ 5 boincer umatlas      4096 Nov 25 17:24 pilot3
[2025-11-26 04:34:23] -rw-r--r-- 1 boincer umatlas       533 Nov 26 04:25 boinc_task_state.xml
[2025-11-26 04:34:23] -rw-r--r-- 1 boincer umatlas      5912 Nov 26 04:27 init_data.xml
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas 920951090 Nov 26 04:33 HITS.47556149._004730.pool.root.1
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas      1064 Nov 26 04:33 memory_monitor_summary.json
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas   1516240 Nov 26 04:33 agis_ddmendpoints.agis.ALL.json
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas   1913797 Nov 26 04:33 log.47556149._004730.job.log.tgz.1
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas      8658 Nov 26 04:33 heartbeat.json
[2025-11-26 04:34:23] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 04:33 boinc_mmap_file
[2025-11-26 04:34:23] -rw-r--r-- 1 boincer umatlas        29 Nov 26 04:33 wrapper_checkpoint.txt
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas        95 Nov 26 04:34 pilot_heartbeat.json
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas       745 Nov 26 04:34 pilotlog.txt
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas   5547389 Nov 26 04:34 log.47556149._004730.job.log.1
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas       353 Nov 26 04:34 output.list
[2025-11-26 04:34:23] -rw-r--r-- 1 boincer umatlas       620 Nov 26 04:34 runtime_log
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas   7485440 Nov 26 04:34 result.tar.gz
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas       667 Nov 26 04:34 tRVLDmxjyh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmn4LKDm6a1sJo.diag
[2025-11-26 04:34:23] -rw-r--r-- 1 boincer umatlas      9338 Nov 26 04:34 runtime_log.err
[2025-11-26 04:34:23] -rw-r--r-- 1 boincer umatlas     21297 Nov 26 04:34 stderr.txt
[2025-11-26 04:34:23] HITS file was successfully produced:
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas 920951090 Nov 26 04:33 shared/HITS.pool.root.1
[2025-11-26 04:34:23]  *** Contents of shared directory: ***
[2025-11-26 04:34:23] total 1307308
[2025-11-26 04:34:23] -rw-r--r-- 2 boincer umatlas 409621181 Nov 25 17:23 ATLAS.root_0
[2025-11-26 04:34:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 17:23 start_atlas.sh
[2025-11-26 04:34:23] -rw-r--r-- 2 boincer umatlas    590107 Nov 25 17:23 input.tar.gz
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas 920951090 Nov 26 04:33 HITS.pool.root.1
[2025-11-26 04:34:23] -rw------- 1 boincer umatlas   7485440 Nov 26 04:34 result.tar.gz
04:34:25 (10330): run_atlas exited; CPU time 310179.349212
04:34:25 (10330): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN