Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:39:44 (2037925): wrapper (7.7.26015): starting
23:39:44 (2037925): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 23:39:44] Arguments: --nthreads 3
[2025-11-25 23:39:44] Threads: 3
[2025-11-25 23:39:44] Checking for CVMFS
[2025-11-25 23:39:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:39:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:39:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:39:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:39:44] 2.9.2.0 1308651 157 65072 153300 2 88 35410634 36864000 0 130560 0 2191263 99.998 9454 6724 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 23:39:44] CVMFS is ok
[2025-11-25 23:39:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:39:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:39:44] Further information can be found at the LHC@home message board.
[2025-11-25 23:39:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:39:44] Checking for apptainer binary...
[2025-11-25 23:39:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:39:44] Running /usr/bin/apptainer --version
[2025-11-25 23:39:44] apptainer version 1.4.1-1.1
[2025-11-25 23:39:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:39:44] thA335
[2025-11-25 23:39:44] apptainer works
[2025-11-25 23:39:44] Set ATHENA_PROC_NUMBER=3
[2025-11-25 23:39:44] Set ATHENA_CORE_NUMBER=3
[2025-11-25 23:39:44] Starting ATLAS job with PandaID=6895674852
[2025-11-25 23:39:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:44:02]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:44:02] ID="centos"
[2025-11-25 23:44:02] ID_LIKE="rhel fedora"
[2025-11-25 23:44:02] VERSION_ID="7"
[2025-11-25 23:44:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:44:02] ANSI_COLOR="0;31"
[2025-11-25 23:44:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:44:02] HOME_URL="https://www.centos.org/"
[2025-11-25 23:44:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:44:02] 
[2025-11-25 23:44:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:44:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:44:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:44:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:44:02] 
[2025-11-25 23:44:02] 2025-11-25 22:43:09,702 | INFO     | ***************************************
[2025-11-25 23:44:02] 2025-11-25 22:43:10,205 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 23:44:02] 2025-11-25 22:43:10,219 | INFO     | sufficient remaining disk space (826615529472 B)
[2025-11-25 23:44:02] 2025-11-25 22:43:10,220 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:44:02] 2025-11-25 22:43:10,220 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:44:02] 2025-11-25 22:43:10,220 | INFO     | update_server=False
[2025-11-25 23:44:02] 2025-11-25 22:43:10,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:44:02] 2025-11-25 22:43:10,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:44:02] 2025-11-25 22:43:10,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:44:02] 2025-11-25 22:43:10,220 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 23:44:02] 2025-11-25 22:43:10,220 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:44:02] 2025-11-25 22:43:10,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:44:02] 2025-11-25 22:43:10,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:44:02] 2025-11-25 22:43:10,223 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:44:02] 2025-11-25 22:43:10,224 | INFO     | aborting loop
[2025-11-25 23:44:02] 2025-11-25 22:43:10,729 | INFO     | all payload control threads have been joined
[2025-11-25 23:44:02] 2025-11-25 22:43:10,831 | INFO     | all data control threads have been joined
[2025-11-25 23:44:02] 2025-11-25 22:43:11,119 | INFO     | all job control threads have been joined
[2025-11-25 23:44:02] 2025-11-25 22:43:11,145 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:44:02] 2025-11-25 22:43:11,226 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:11,227 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:11,229 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:11,274 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:11,727 | INFO     | [job] validate thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:11,735 | INFO     | [payload] control thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:11,808 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:11,814 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:11,837 | INFO     | [data] control thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:11,874 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:12,125 | INFO     | [job] control thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:12,279 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:12,337 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:12,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:13,152 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:14,225 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:44:02] 2025-11-25 22:43:56,424 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:44:02] 2025-11-25 22:43:57,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140021115000640)>', '<ExcThread(monitor, started 140020480464640)>']
[2025-11-25 23:44:02] 2025-11-25 22:43:58,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:44:02] 2025-11-25 22:43:58,472 | INFO     | [monitor] control thread has ended
[2025-11-25 23:44:02] 2025-11-25 22:44:02,517 | INFO     | all workflow threads have been joined
[2025-11-25 23:44:02] 2025-11-25 22:44:02,517 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:44:02] 2025-11-25 22:44:02,518 | INFO     | traces error code: 0
[2025-11-25 23:44:02] 2025-11-25 22:44:02,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:44:02] 2025-11-25 22:44:02,565 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:44:02] 2025-11-25 22:44:02,568 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:44:02] 2025-11-25 22:44:02,571 [wrapper] pilotpid: 2041650
[2025-11-25 23:44:02] 2025-11-25 22:44:02,573 [wrapper] Pilot exit status: 0
[2025-11-25 23:44:02] 2025-11-25 22:44:02,579 [wrapper] pandaids: 6895674852
[2025-11-25 23:44:02] 2025-11-25 22:44:02,596 [wrapper] cleanup supervisor_pilot 2041656 2041651
[2025-11-25 23:44:02] 2025-11-25 22:44:02,598 [wrapper] Test setup, not cleaning
[2025-11-25 23:44:02] 2025-11-25 22:44:02,601 [wrapper] apfmon messages muted
[2025-11-25 23:44:02] 2025-11-25 22:44:02,603 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:44:02] 2025-11-25 22:44:02,606 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:44:02]  *** Error codes and diagnostics ***
[2025-11-25 23:44:02]     "exeErrorCode": 65,
[2025-11-25 23:44:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 23:44:02]     "pilotErrorCode": 1305,
[2025-11-25 23:44:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 23:44:02]  *** Listing of results directory ***
[2025-11-25 23:44:02] total 402644
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc    576529 Nov 24 16:13 pilot3.tar.gz
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc      5112 Nov 24 16:25 queuedata.json
[2025-11-25 23:44:02] -rwx------ 1 boinc boinc     36292 Nov 24 16:26 runpilot2-wrapper.sh
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc       100 Nov 25 23:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:44:02] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 23:39 run_atlas
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc       105 Nov 25 23:39 job.xml
[2025-11-25 23:44:02] -rw-r--r-- 2 boinc boinc 408116843 Nov 25 23:39 EVNT.47483658._001366.pool.root.1
[2025-11-25 23:44:02] -rw-r--r-- 2 boinc boinc    590105 Nov 25 23:39 input.tar.gz
[2025-11-25 23:44:02] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:39 start_atlas.sh
[2025-11-25 23:44:02] drwxrwx--x 2 boinc boinc      4096 Nov 25 23:39 shared
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc         0 Nov 25 23:39 boinc_setup_complete
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc      6196 Nov 25 23:39 init_data.xml
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc         0 Nov 25 23:39 boinc_lockfile
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc      2786 Nov 25 23:39 pandaJob.out
[2025-11-25 23:44:02] -rw------- 1 boinc boinc    991877 Nov 25 23:39 agis_schedconf.cvmfs.json
[2025-11-25 23:44:02] -rw------- 1 boinc boinc   1516240 Nov 25 23:39 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:44:02] drwx------ 5 boinc boinc      4096 Nov 25 23:39 pilot3
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc       522 Nov 25 23:40 boinc_task_state.xml
[2025-11-25 23:44:02] -rw------- 1 boinc boinc       985 Nov 25 23:40 memory_monitor_summary.json
[2025-11-25 23:44:02] -rw------- 1 boinc boinc     56249 Nov 25 23:41 log.47556149._003527.job.log.tgz.1
[2025-11-25 23:44:02] -rw------- 1 boinc boinc        95 Nov 25 23:42 pilot_heartbeat.json
[2025-11-25 23:44:02] -rw------- 1 boinc boinc      8397 Nov 25 23:43 heartbeat.json
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc      8192 Nov 25 23:43 boinc_mmap_file
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc        22 Nov 25 23:43 wrapper_checkpoint.txt
[2025-11-25 23:44:02] -rw------- 1 boinc boinc      4556 Nov 25 23:44 pilotlog.txt
[2025-11-25 23:44:02] -rw------- 1 boinc boinc     91813 Nov 25 23:44 log.47556149._003527.job.log.1
[2025-11-25 23:44:02] -rw------- 1 boinc boinc       186 Nov 25 23:44 output.list
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc       620 Nov 25 23:44 runtime_log
[2025-11-25 23:44:02] -rw------- 1 boinc boinc    163840 Nov 25 23:44 result.tar.gz
[2025-11-25 23:44:02] -rw------- 1 boinc boinc       649 Nov 25 23:44 02qKDmwdnh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWjLKDmL1Nwin.diag
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc      8744 Nov 25 23:44 runtime_log.err
[2025-11-25 23:44:02] -rw-r--r-- 1 boinc boinc      8919 Nov 25 23:44 stderr.txt
[2025-11-25 23:44:02] No HITS result produced
[2025-11-25 23:44:02]  *** Contents of shared directory: ***
[2025-11-25 23:44:02] total 399312
[2025-11-25 23:44:02] -rw-r--r-- 2 boinc boinc 408116843 Nov 25 23:39 ATLAS.root_0
[2025-11-25 23:44:02] -rw-r--r-- 2 boinc boinc    590105 Nov 25 23:39 input.tar.gz
[2025-11-25 23:44:02] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:39 start_atlas.sh
[2025-11-25 23:44:02] -rw------- 1 boinc boinc    163840 Nov 25 23:44 result.tar.gz
23:44:03 (2037925): run_atlas exited; CPU time 30.613210
23:44:03 (2037925): called boinc_finish(0)

</stderr_txt>
]]>

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