Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:58:26 (302712): wrapper (7.7.26015): starting
19:58:26 (302712): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 19:58:26] Arguments: --nthreads 9
[2025-11-25 19:58:26] Threads: 9
[2025-11-25 19:58:26] Checking for CVMFS
[2025-11-25 19:58:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:58:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:58:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:58:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:58:27] 2.13.3.0 9702 29362 333472 153303 2 490 19639216 32935936 22446 16776704 0 150608864 99.701 107162223 32862 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:58:27] CVMFS is ok
[2025-11-25 19:58:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:58:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:58:27] Further information can be found at the LHC@home message board.
[2025-11-25 19:58:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:58:27] Checking for apptainer binary...
[2025-11-25 19:58:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:58:27] Running /usr/bin/apptainer --version
[2025-11-25 19:58:27] apptainer version 1.4.4-1.el9
[2025-11-25 19:58:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:58:28] c-4-37.aglt2.org
[2025-11-25 19:58:28] apptainer works
[2025-11-25 19:58:28] Set ATHENA_PROC_NUMBER=9
[2025-11-25 19:58:28] Set ATHENA_CORE_NUMBER=9
[2025-11-25 19:58:28] Starting ATLAS job with PandaID=6895673668
[2025-11-25 19:58:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:16:52]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:16:52] 2025-11-26 18:16:12,450 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:16:52] 2025-11-26 18:16:12,469 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:16:52] 2025-11-26 18:16:12,470 | INFO     | sum of square deviations: 328093176586.546
[2025-11-26 13:16:52] 2025-11-26 18:16:12,499 | INFO     | sum of deviations: 2664539863808.088
[2025-11-26 13:16:52] 2025-11-26 18:16:12,499 | INFO     | mean x: 1764149858.373896
[2025-11-26 13:16:52] 2025-11-26 18:16:12,499 | INFO     | mean y: 3098892.5220804713
[2025-11-26 13:16:52] 2025-11-26 18:16:12,500 | INFO     | intersect: -14324073870.635578
[2025-11-26 13:16:52] 2025-11-26 18:16:12,501 | INFO     | chi2: 8.3587003677694
[2025-11-26 13:16:52] 2025-11-26 18:16:12,503 | INFO     | sum of square deviations: 323287587884.5602
[2025-11-26 13:16:52] 2025-11-26 18:16:12,530 | INFO     | sum of deviations: 3045966118701.529
[2025-11-26 13:16:52] 2025-11-26 18:16:12,531 | INFO     | mean x: 1764149705.8806705
[2025-11-26 13:16:52] 2025-11-26 18:16:12,531 | INFO     | mean y: 3110998.343195266
[2025-11-26 13:16:52] 2025-11-26 18:16:12,531 | INFO     | intersect: -16618437226.231941
[2025-11-26 13:16:52] 2025-11-26 18:16:12,532 | INFO     | chi2: 4.976349471221517
[2025-11-26 13:16:52] 2025-11-26 18:16:12,533 | INFO     | current chi2=4.976349471221517 (change=40.46503341105522 %)
[2025-11-26 13:16:52] 2025-11-26 18:16:12,534 | INFO     | sum of square deviations: 318529162857.4828
[2025-11-26 13:16:52] 2025-11-26 18:16:12,557 | INFO     | sum of deviations: 3276171534162.7617
[2025-11-26 13:16:52] 2025-11-26 18:16:12,557 | INFO     | mean x: 1764149553.3875124
[2025-11-26 13:16:52] 2025-11-26 18:16:12,557 | INFO     | mean y: 3118368.10802775
[2025-11-26 13:16:52] 2025-11-26 18:16:12,557 | INFO     | intersect: -18141708614.029453
[2025-11-26 13:16:52] 2025-11-26 18:16:12,558 | INFO     | chi2: 3.395067529898958
[2025-11-26 13:16:52] 2025-11-26 18:16:12,558 | INFO     | current chi2=3.395067529898958 (change=31.775942394463915 %)
[2025-11-26 13:16:52] 2025-11-26 18:16:12,559 | INFO     | sum of square deviations: 313817484667.1666
[2025-11-26 13:16:52] 2025-11-26 18:16:12,582 | INFO     | sum of deviations: 3279375113925.432
[2025-11-26 13:16:52] 2025-11-26 18:16:12,583 | INFO     | mean x: 1764149400.8914342
[2025-11-26 13:16:52] 2025-11-26 18:16:12,583 | INFO     | mean y: 3118467.52689243
[2025-11-26 13:16:52] 2025-11-26 18:16:12,583 | INFO     | intersect: -18432143827.261112
[2025-11-26 13:16:52] 2025-11-26 18:16:12,584 | INFO     | chi2: 3.286097762237953
[2025-11-26 13:16:52] 2025-11-26 18:16:12,584 | INFO     | current chi2=3.286097762237953 (change=3.209649490072092 %)
[2025-11-26 13:16:52] 2025-11-26 18:16:12,584 | INFO     | right removable region: 1003
[2025-11-26 13:16:52] 2025-11-26 18:16:12,586 | INFO     | sum of square deviations: 323286733884.55994
[2025-11-26 13:16:52] 2025-11-26 18:16:12,612 | INFO     | sum of deviations: 2292579329102.548
[2025-11-26 13:16:52] 2025-11-26 18:16:12,612 | INFO     | mean x: 1764150010.8806705
[2025-11-26 13:16:52] 2025-11-26 18:16:12,612 | INFO     | mean y: 3110688.0788954636
[2025-11-26 13:16:52] 2025-11-26 18:16:12,612 | INFO     | intersect: -12507312488.843866
[2025-11-26 13:16:52] 2025-11-26 18:16:12,614 | INFO     | chi2: 5.4066999973011045
[2025-11-26 13:16:52] 2025-11-26 18:16:12,614 | INFO     | current chi2=5.4066999973011045 (change=35.316499462655884 %)
[2025-11-26 13:16:52] 2025-11-26 18:16:12,615 | INFO     | sum of square deviations: 318527764136.33374
[2025-11-26 13:16:52] 2025-11-26 18:16:12,642 | INFO     | sum of deviations: 2206045880164.9126
[2025-11-26 13:16:52] 2025-11-26 18:16:12,643 | INFO     | mean x: 1764150163.382557
[2025-11-26 13:16:52] 2025-11-26 18:16:12,643 | INFO     | mean y: 3113460.4380574827
[2025-11-26 13:16:52] 2025-11-26 18:16:12,643 | INFO     | intersect: -12214961816.216984
[2025-11-26 13:16:52] 2025-11-26 18:16:12,644 | INFO     | chi2: 5.347365607407153
[2025-11-26 13:16:52] 2025-11-26 18:16:12,645 | INFO     | current chi2=5.347365607407153 (change=1.0974233806863682 %)
[2025-11-26 13:16:52] 2025-11-26 18:16:12,645 | INFO     | left removable region: 20
[2025-11-26 13:16:52] 2025-11-26 18:16:12,646 | INFO     | sum of square deviations: 294533829519.0461
[2025-11-26 13:16:52] 2025-11-26 18:16:12,670 | INFO     | sum of deviations: 2664965814286.766
[2025-11-26 13:16:52] 2025-11-26 18:16:12,670 | INFO     | mean x: 1764149980.4059002
[2025-11-26 13:16:52] 2025-11-26 18:16:12,670 | INFO     | mean y: 3138319.419125127
[2025-11-26 13:16:52] 2025-11-26 18:16:12,670 | INFO     | intersect: -15959032806.164177
[2025-11-26 13:16:52] 2025-11-26 18:16:12,672 | INFO     | chi2: 0.1762732522371989
[2025-11-26 13:16:52] 2025-11-26 18:16:12,672 | INFO     | current memory leak: 9.05 B/s (using 983 data points, chi2=0.18)
[2025-11-26 13:16:52] 2025-11-26 18:16:12,673 | INFO     | could have reported an average CPU frequency of 2599 MHz (37 samples)
[2025-11-26 13:16:52] 2025-11-26 18:16:12,673 | INFO     | ..............................
[2025-11-26 13:16:52] 2025-11-26 18:16:12,673 | INFO     | . Timing measurements:
[2025-11-26 13:16:52] 2025-11-26 18:16:12,673 | INFO     | . get job = 0 s
[2025-11-26 13:16:52] 2025-11-26 18:16:12,674 | INFO     | . initial setup = 3 s
[2025-11-26 13:16:52] 2025-11-26 18:16:12,674 | INFO     | . payload setup = 19 s
[2025-11-26 13:16:52] 2025-11-26 18:16:12,674 | INFO     | . stage-in = 0 s
[2025-11-26 13:16:52] 2025-11-26 18:16:12,674 | INFO     | . payload execution = 62162 s
[2025-11-26 13:16:52] 2025-11-26 18:16:12,674 | INFO     | . stage-out = 4 s
[2025-11-26 13:16:52] 2025-11-26 18:16:12,674 | INFO     | . log creation = 1 s
[2025-11-26 13:16:52] 2025-11-26 18:16:12,674 | INFO     | ..............................
[2025-11-26 13:16:52] 2025-11-26 18:16:13,308 | INFO     | 
[2025-11-26 13:16:52] 2025-11-26 18:16:13,308 | INFO     | job summary report
[2025-11-26 13:16:52] 2025-11-26 18:16:13,308 | INFO     | --------------------------------------------------
[2025-11-26 13:16:52] 2025-11-26 18:16:13,308 | INFO     | PanDA job id: 6895673668
[2025-11-26 13:16:52] 2025-11-26 18:16:13,308 | INFO     | task id: 47556149
[2025-11-26 13:16:52] 2025-11-26 18:16:13,309 | INFO     | errors: (none)
[2025-11-26 13:16:52] 2025-11-26 18:16:13,309 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:16:52] 2025-11-26 18:16:13,309 | INFO     | pilot state: finished 
[2025-11-26 13:16:52] 2025-11-26 18:16:13,309 | INFO     | transexitcode: 0
[2025-11-26 13:16:52] 2025-11-26 18:16:13,309 | INFO     | exeerrorcode: 0
[2025-11-26 13:16:52] 2025-11-26 18:16:13,309 | INFO     | exeerrordiag: 
[2025-11-26 13:16:52] 2025-11-26 18:16:13,309 | INFO     | exitcode: 0
[2025-11-26 13:16:52] 2025-11-26 18:16:13,309 | INFO     | exitmsg: OK
[2025-11-26 13:16:52] 2025-11-26 18:16:13,309 | INFO     | cpuconsumptiontime: 296390 s
[2025-11-26 13:16:52] 2025-11-26 18:16:13,309 | INFO     | nevents: 1000
[2025-11-26 13:16:52] 2025-11-26 18:16:13,310 | INFO     | neventsw: 0
[2025-11-26 13:16:52] 2025-11-26 18:16:13,310 | INFO     | pid: 333355
[2025-11-26 13:16:52] 2025-11-26 18:16:13,310 | INFO     | pgrp: 333355
[2025-11-26 13:16:52] 2025-11-26 18:16:13,310 | INFO     | corecount: 9
[2025-11-26 13:16:52] 2025-11-26 18:16:13,310 | INFO     | event service: False
[2025-11-26 13:16:52] 2025-11-26 18:16:13,310 | INFO     | sizes: {0: 2284143, 1: 2284342, 12: 2284342, 15: 2284632, 23: 2284660, 62186: 2337971, 62191: 2346965, 62193: 2347021, 62203: 2347267}
[2025-11-26 13:16:52] 2025-11-26 18:16:13,310 | INFO     | --------------------------------------------------
[2025-11-26 13:16:52] 2025-11-26 18:16:13,310 | INFO     | 
[2025-11-26 13:16:52] 2025-11-26 18:16:13,310 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 13:16:52] 2025-11-26 18:16:13,365 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,366 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,366 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,366 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,366 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,366 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,366 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,366 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,366 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,367 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,367 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:16:52] 2025-11-26 18:16:13,367 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,368 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:16:52] 2025-11-26 18:16:13,368 | INFO     | job 6895673668 has completed (purged errors)
[2025-11-26 13:16:52] 2025-11-26 18:16:13,368 | INFO     | overall cleanup function is called
[2025-11-26 13:16:52] 2025-11-26 18:16:14,444 | INFO     | --- collectZombieJob: --- 10, [333355]
[2025-11-26 13:16:52] 2025-11-26 18:16:14,444 | INFO     | zombie collector waiting for pid 333355
[2025-11-26 13:16:52] 2025-11-26 18:16:14,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:16:52] 2025-11-26 18:16:14,444 | INFO     | collected zombie processes
[2025-11-26 13:16:52] 2025-11-26 18:16:14,444 | INFO     | will attempt to kill all subprocesses of pid=333355
[2025-11-26 13:16:52] 2025-11-26 18:16:15,165 | INFO     | process IDs to be killed: [333355] (in reverse order)
[2025-11-26 13:16:52] 2025-11-26 18:16:15,308 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:16:52] 2025-11-26 18:16:15,308 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:16:52] 2025-11-26 18:16:15,323 | INFO     | did not find any defunct processes belonging to 333355
[2025-11-26 13:16:52] 2025-11-26 18:16:15,339 | INFO     | did not find any defunct processes belonging to 333355
[2025-11-26 13:16:52] 2025-11-26 18:16:15,340 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:16:52] 2025-11-26 18:16:15,340 | INFO     | ready for new job
[2025-11-26 13:16:52] 2025-11-26 18:16:15,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:16:52] 2025-11-26 18:16:15,345 | INFO     | ***************************************
[2025-11-26 13:16:52] 2025-11-26 18:16:15,346 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:16:52] 2025-11-26 18:16:15,346 | INFO     | ***************************************
[2025-11-26 13:16:52] 2025-11-26 18:16:15,346 | INFO     | 
[2025-11-26 13:16:52] 2025-11-26 18:16:15,348 | INFO     | architecture information:
[2025-11-26 13:16:52] 2025-11-26 18:16:15,348 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:16:52] 2025-11-26 18:16:15,368 | INFO     | cat /etc/os-release:
[2025-11-26 13:16:52] NAME="CentOS Linux"
[2025-11-26 13:16:52] VERSION="7 (Core)"
[2025-11-26 13:16:52] ID="centos"
[2025-11-26 13:16:52] ID_LIKE="rhel fedora"
[2025-11-26 13:16:52] VERSION_ID="7"
[2025-11-26 13:16:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:16:52] ANSI_COLOR="0;31"
[2025-11-26 13:16:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:16:52] HOME_URL="https://www.centos.org/"
[2025-11-26 13:16:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:16:52] 
[2025-11-26 13:16:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:16:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:16:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:16:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:16:52] 
[2025-11-26 13:16:52] 2025-11-26 18:16:15,368 | INFO     | ***************************************
[2025-11-26 13:16:52] 2025-11-26 18:16:15,872 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 13:16:52] 2025-11-26 18:16:15,937 | INFO     | sufficient remaining disk space (72578236416 B)
[2025-11-26 13:16:52] 2025-11-26 18:16:15,938 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:16:52] 2025-11-26 18:16:15,938 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:16:52] 2025-11-26 18:16:15,938 | INFO     | update_server=False
[2025-11-26 13:16:52] 2025-11-26 18:16:15,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:16:52] 2025-11-26 18:16:16,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:16:52] 2025-11-26 18:16:16,213 | INFO     | aborting loop
[2025-11-26 13:16:52] 2025-11-26 18:16:16,285 | INFO     | all payload control threads have been joined
[2025-11-26 13:16:52] 2025-11-26 18:16:16,349 | INFO     | all job control threads have been joined
[2025-11-26 13:16:52] 2025-11-26 18:16:16,756 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:16:52] 2025-11-26 18:16:16,958 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:16,981 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:16,991 | INFO     | all data control threads have been joined
[2025-11-26 13:16:52] 2025-11-26 18:16:17,039 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:17,218 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:17,291 | INFO     | [payload] control thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:17,355 | INFO     | [job] control thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:17,749 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:17,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:16:52] 2025-11-26 18:16:17,963 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:16:52] 2025-11-26 18:16:17,999 | INFO     | [data] control thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:18,043 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:18,053 | INFO     | [job] validate thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:18,274 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:18,433 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:18,763 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:18,841 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:21,973 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:26,862 | INFO     | job.realtimelogging is not enabled
[2025-11-26 13:16:52] 2025-11-26 18:16:27,868 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:16:52] 2025-11-26 18:16:45,067 | INFO     | PID=308355 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 13:16:52] 2025-11-26 18:16:45,068 | INFO     | .. there are 43 such processes running
[2025-11-26 13:16:52] 2025-11-26 18:16:45,068 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:16:52] 2025-11-26 18:16:45,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:16:52] 2025-11-26 18:16:45,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:16:52] 2025-11-26 18:16:45,697 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:16:52] 2025-11-26 18:16:47,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140058205366080)>', '<ExcThread(monitor, started 140057860101888)>']
[2025-11-26 13:16:52] 2025-11-26 18:16:48,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:16:52] 2025-11-26 18:16:48,095 | INFO     | [monitor] control thread has ended
[2025-11-26 13:16:52] 2025-11-26 18:16:52,449 | INFO     | all workflow threads have been joined
[2025-11-26 13:16:52] 2025-11-26 18:16:52,449 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:16:52] 2025-11-26 18:16:52,449 | INFO     | traces error code: 0
[2025-11-26 13:16:52] 2025-11-26 18:16:52,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:16:52] 2025-11-26 18:16:52,617 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:16:52] 2025-11-26 18:16:52,620 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:16:52] 2025-11-26 18:16:52,622 [wrapper] pilotpid: 308355
[2025-11-26 13:16:52] 2025-11-26 18:16:52,625 [wrapper] Pilot exit status: 0
[2025-11-26 13:16:52] 2025-11-26 18:16:52,646 [wrapper] pandaids: 6895673668
[2025-11-26 13:16:52] 2025-11-26 18:16:52,744 [wrapper] cleanup supervisor_pilot 3913591 308357
[2025-11-26 13:16:52] 2025-11-26 18:16:52,750 [wrapper] Test setup, not cleaning
[2025-11-26 13:16:52] 2025-11-26 18:16:52,753 [wrapper] apfmon messages muted
[2025-11-26 13:16:52] 2025-11-26 18:16:52,759 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:16:52] 2025-11-26 18:16:52,767 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:16:52]  *** Error codes and diagnostics ***
[2025-11-26 13:16:52]     "exeErrorCode": 0,
[2025-11-26 13:16:52]     "exeErrorDiag": "",
[2025-11-26 13:16:52]     "pilotErrorCode": 0,
[2025-11-26 13:16:52]     "pilotErrorDiag": "",
[2025-11-26 13:16:52]  *** Listing of results directory ***
[2025-11-26 13:16:52] total 1321392
[2025-11-26 13:16:52] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 08:07 queuedata.json
[2025-11-26 13:16:52] -rwx------. 1 boincer umatlas     36292 Nov 24 08:08 runpilot2-wrapper.sh
[2025-11-26 13:16:52] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 08:08 pilot3.tar.gz
[2025-11-26 13:16:52] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:16:52] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:58 run_atlas
[2025-11-26 13:16:52] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:58 job.xml
[2025-11-26 13:16:52] -rw-r--r--. 2 boincer umatlas 411925820 Nov 25 19:58 EVNT.47483658._001346.pool.root.1
[2025-11-26 13:16:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:58 start_atlas.sh
[2025-11-26 13:16:52] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:58 shared
[2025-11-26 13:16:52] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 19:58 input.tar.gz
[2025-11-26 13:16:52] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:58 boinc_lockfile
[2025-11-26 13:16:52] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 19:58 pandaJob.out
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas        57 Nov 25 19:58 setup.sh.local
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas    991877 Nov 25 19:58 agis_schedconf.cvmfs.json
[2025-11-26 13:16:52] drwx------. 5 boincer umatlas      4096 Nov 25 19:58 pilot3
[2025-11-26 13:16:52] -rw-r--r--. 1 boincer umatlas       532 Nov 26 13:03 boinc_task_state.xml
[2025-11-26 13:16:52] -rw-r--r--. 1 boincer umatlas      6661 Nov 26 13:12 init_data.xml
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas 916620356 Nov 26 13:15 HITS.47556149._003329.pool.root.1
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas        95 Nov 26 13:15 pilot_heartbeat.json
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas      1057 Nov 26 13:15 memory_monitor_summary.json
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas   1516240 Nov 26 13:15 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas   2281018 Nov 26 13:16 log.47556149._003329.job.log.tgz.1
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas      7945 Nov 26 13:16 heartbeat.json
[2025-11-26 13:16:52] -rw-r--r--. 1 boincer umatlas        29 Nov 26 13:16 wrapper_checkpoint.txt
[2025-11-26 13:16:52] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 13:16 boinc_mmap_file
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas      4895 Nov 26 13:16 pilotlog.txt
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas   8037753 Nov 26 13:16 log.47556149._003329.job.log.1
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas       353 Nov 26 13:16 output.list
[2025-11-26 13:16:52] -rw-r--r--. 1 boincer umatlas       620 Nov 26 13:16 runtime_log
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas  10342400 Nov 26 13:16 result.tar.gz
[2025-11-26 13:16:52] -rw-r--r--. 1 boincer umatlas      9333 Nov 26 13:16 runtime_log.err
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas       658 Nov 26 13:16 2C6NDmMUlh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVhLKDmeIky3n.diag
[2025-11-26 13:16:52] -rw-r--r--. 1 boincer umatlas     21114 Nov 26 13:16 stderr.txt
[2025-11-26 13:16:52] HITS file was successfully produced:
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas 916620356 Nov 26 13:15 shared/HITS.pool.root.1
[2025-11-26 13:16:52]  *** Contents of shared directory: ***
[2025-11-26 13:16:52] total 1308116
[2025-11-26 13:16:52] -rw-r--r--. 2 boincer umatlas 411925820 Nov 25 19:58 ATLAS.root_0
[2025-11-26 13:16:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:58 start_atlas.sh
[2025-11-26 13:16:52] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 19:58 input.tar.gz
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas 916620356 Nov 26 13:15 HITS.pool.root.1
[2025-11-26 13:16:52] -rw-------. 1 boincer umatlas  10342400 Nov 26 13:16 result.tar.gz
13:16:54 (302712): run_atlas exited; CPU time 298742.628145
13:16:54 (302712): called boinc_finish(0)

</stderr_txt>
]]>

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