Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:41:03 (1478253): wrapper (7.7.26015): starting
17:41:03 (1478253): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 17:41:03] Arguments: --nthreads 8
[2025-11-25 17:41:03] Threads: 8
[2025-11-25 17:41:03] Checking for CVMFS
[2025-11-25 17:41:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:41:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:41:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:41:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:41:04] 2.13.3.0 7385 29159 188772 153300 0 1000 23914976 32503809 59554 16776704 0 412025296 99.662 354747204 49381 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 17:41:04] CVMFS is ok
[2025-11-25 17:41:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:41:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:41:04] Further information can be found at the LHC@home message board.
[2025-11-25 17:41:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:41:04] Checking for apptainer binary...
[2025-11-25 17:41:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:41:04] Running /usr/bin/apptainer --version
[2025-11-25 17:41:05] apptainer version 1.4.4-1.el9
[2025-11-25 17:41:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:41:06] c8-7-1.aglt2.org
[2025-11-25 17:41:06] apptainer works
[2025-11-25 17:41:06] Set ATHENA_PROC_NUMBER=8
[2025-11-25 17:41:06] Set ATHENA_CORE_NUMBER=8
[2025-11-25 17:41:06] Starting ATLAS job with PandaID=6895352291
[2025-11-25 17:41:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 01:18:31]  *** The last 200 lines of the pilot log: ***
[2025-11-26 01:18:31] 2025-11-26 06:17:57,354 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 01:18:31] 2025-11-26 06:17:57,354 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 01:18:31] 2025-11-26 06:17:57,358 | INFO     | fitting pss+swap vs Time
[2025-11-26 01:18:31] 2025-11-26 06:17:57,359 | INFO     | sum of square deviations: 27881124462.491066
[2025-11-26 01:18:31] 2025-11-26 06:17:57,361 | INFO     | sum of deviations: 147563005398.74103
[2025-11-26 01:18:31] 2025-11-26 06:17:57,361 | INFO     | mean x: 1764124191.0580356
[2025-11-26 01:18:31] 2025-11-26 06:17:57,361 | INFO     | mean y: 2821620.933035714
[2025-11-26 01:18:31] 2025-11-26 06:17:57,361 | INFO     | intersect: -9333941961.875778
[2025-11-26 01:18:31] 2025-11-26 06:17:57,361 | INFO     | chi2: 7.607156276098885
[2025-11-26 01:18:31] 2025-11-26 06:17:57,362 | INFO     | sum of square deviations: 26958057820.916508
[2025-11-26 01:18:31] 2025-11-26 06:17:57,364 | INFO     | sum of deviations: 306141830897.0815
[2025-11-26 01:18:31] 2025-11-26 06:17:57,364 | INFO     | mean x: 1764124038.5643342
[2025-11-26 01:18:31] 2025-11-26 06:17:57,364 | INFO     | mean y: 2847819.2076749434
[2025-11-26 01:18:31] 2025-11-26 06:17:57,364 | INFO     | intersect: -20030945664.112247
[2025-11-26 01:18:31] 2025-11-26 06:17:57,365 | INFO     | chi2: 3.9461157792586867
[2025-11-26 01:18:31] 2025-11-26 06:17:57,365 | INFO     | current chi2=3.9461157792586867 (change=48.1262690546126 %)
[2025-11-26 01:18:31] 2025-11-26 06:17:57,365 | INFO     | sum of square deviations: 26055596216.805996
[2025-11-26 01:18:31] 2025-11-26 06:17:57,368 | INFO     | sum of deviations: 393518004150.8719
[2025-11-26 01:18:31] 2025-11-26 06:17:57,368 | INFO     | mean x: 1764123886.0707762
[2025-11-26 01:18:31] 2025-11-26 06:17:57,368 | INFO     | mean y: 2862558.5525114154
[2025-11-26 01:18:31] 2025-11-26 06:17:57,368 | INFO     | intersect: -26640723139.69683
[2025-11-26 01:18:31] 2025-11-26 06:17:57,368 | INFO     | chi2: 2.640181623398822
[2025-11-26 01:18:31] 2025-11-26 06:17:57,368 | INFO     | current chi2=2.640181623398822 (change=33.094167249831585 %)
[2025-11-26 01:18:31] 2025-11-26 06:17:57,368 | INFO     | sum of square deviations: 25173507087.658035
[2025-11-26 01:18:31] 2025-11-26 06:17:57,371 | INFO     | sum of deviations: 428106305011.63727
[2025-11-26 01:18:31] 2025-11-26 06:17:57,371 | INFO     | mean x: 1764123733.5773673
[2025-11-26 01:18:31] 2025-11-26 06:17:57,371 | INFO     | mean y: 2868519.0854503466
[2025-11-26 01:18:31] 2025-11-26 06:17:57,371 | INFO     | intersect: -29998215181.143715
[2025-11-26 01:18:31] 2025-11-26 06:17:57,371 | INFO     | chi2: 2.33112129024691
[2025-11-26 01:18:31] 2025-11-26 06:17:57,371 | INFO     | current chi2=2.33112129024691 (change=11.706025464795296 %)
[2025-11-26 01:18:31] 2025-11-26 06:17:57,371 | INFO     | right removable region: 432
[2025-11-26 01:18:31] 2025-11-26 06:17:57,371 | INFO     | sum of square deviations: 26957932527.042797
[2025-11-26 01:18:31] 2025-11-26 06:17:57,374 | INFO     | sum of deviations: 36891198590.15801
[2025-11-26 01:18:31] 2025-11-26 06:17:57,374 | INFO     | mean x: 1764124343.5620768
[2025-11-26 01:18:31] 2025-11-26 06:17:57,374 | INFO     | mean y: 2839836.1760722348
[2025-11-26 01:18:31] 2025-11-26 06:17:57,374 | INFO     | intersect: -2411316421.1999407
[2025-11-26 01:18:31] 2025-11-26 06:17:57,374 | INFO     | chi2: 5.452202640158292
[2025-11-26 01:18:31] 2025-11-26 06:17:57,374 | INFO     | current chi2=5.452202640158292 (change=28.32797904666814 %)
[2025-11-26 01:18:31] 2025-11-26 06:17:57,374 | INFO     | sum of square deviations: 26055399431.335697
[2025-11-26 01:18:31] 2025-11-26 06:17:57,377 | INFO     | sum of deviations: 13629134535.075378
[2025-11-26 01:18:31] 2025-11-26 06:17:57,377 | INFO     | mean x: 1764124496.0616438
[2025-11-26 01:18:31] 2025-11-26 06:17:57,377 | INFO     | mean y: 2843763.3675799086
[2025-11-26 01:18:31] 2025-11-26 06:17:57,377 | INFO     | intersect: -919939637.3171219
[2025-11-26 01:18:31] 2025-11-26 06:17:57,377 | INFO     | chi2: 5.404953460524122
[2025-11-26 01:18:31] 2025-11-26 06:17:57,377 | INFO     | current chi2=5.404953460524122 (change=0.8666071815848494 %)
[2025-11-26 01:18:31] 2025-11-26 06:17:57,377 | INFO     | left removable region: 20
[2025-11-26 01:18:31] 2025-11-26 06:17:57,377 | INFO     | sum of square deviations: 21685654755.514603
[2025-11-26 01:18:31] 2025-11-26 06:17:57,379 | INFO     | sum of deviations: 256289413795.1457
[2025-11-26 01:18:31] 2025-11-26 06:17:57,380 | INFO     | mean x: 1764124313.0776699
[2025-11-26 01:18:31] 2025-11-26 06:17:57,380 | INFO     | mean y: 2898832.776699029
[2025-11-26 01:18:31] 2025-11-26 06:17:57,380 | INFO     | intersect: -20846201236.266205
[2025-11-26 01:18:31] 2025-11-26 06:17:57,380 | INFO     | chi2: 0.05871439769663573
[2025-11-26 01:18:31] 2025-11-26 06:17:57,380 | INFO     | current memory leak: 11.82 B/s (using 412 data points, chi2=0.06)
[2025-11-26 01:18:31] 2025-11-26 06:17:57,380 | INFO     | could have reported an average CPU frequency of 3796 MHz (18 samples)
[2025-11-26 01:18:31] 2025-11-26 06:17:57,381 | INFO     | ..............................
[2025-11-26 01:18:31] 2025-11-26 06:17:57,381 | INFO     | . Timing measurements:
[2025-11-26 01:18:31] 2025-11-26 06:17:57,381 | INFO     | . get job = 0 s
[2025-11-26 01:18:31] 2025-11-26 06:17:57,381 | INFO     | . initial setup = 2 s
[2025-11-26 01:18:31] 2025-11-26 06:17:57,381 | INFO     | . payload setup = 15 s
[2025-11-26 01:18:31] 2025-11-26 06:17:57,381 | INFO     | . stage-in = 0 s
[2025-11-26 01:18:31] 2025-11-26 06:17:57,381 | INFO     | . payload execution = 27296 s
[2025-11-26 01:18:31] 2025-11-26 06:17:57,381 | INFO     | . stage-out = 4 s
[2025-11-26 01:18:31] 2025-11-26 06:17:57,381 | INFO     | . log creation = 1 s
[2025-11-26 01:18:31] 2025-11-26 06:17:57,381 | INFO     | ..............................
[2025-11-26 01:18:31] 2025-11-26 06:17:57,702 | INFO     | 
[2025-11-26 01:18:31] 2025-11-26 06:17:57,702 | INFO     | job summary report
[2025-11-26 01:18:31] 2025-11-26 06:17:57,702 | INFO     | --------------------------------------------------
[2025-11-26 01:18:31] 2025-11-26 06:17:57,702 | INFO     | PanDA job id: 6895352291
[2025-11-26 01:18:31] 2025-11-26 06:17:57,702 | INFO     | task id: 47556137
[2025-11-26 01:18:31] 2025-11-26 06:17:57,702 | INFO     | errors: (none)
[2025-11-26 01:18:31] 2025-11-26 06:17:57,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 01:18:31] 2025-11-26 06:17:57,702 | INFO     | pilot state: finished 
[2025-11-26 01:18:31] 2025-11-26 06:17:57,702 | INFO     | transexitcode: 0
[2025-11-26 01:18:31] 2025-11-26 06:17:57,702 | INFO     | exeerrorcode: 0
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | exeerrordiag: 
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | exitcode: 0
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | exitmsg: OK
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | cpuconsumptiontime: 136016 s
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | nevents: 1000
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | neventsw: 0
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | pid: 1504722
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | pgrp: 1504722
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | corecount: 8
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | event service: False
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | sizes: {0: 2284315, 10: 2284315, 14: 2284605, 21: 2284633, 27316: 2322290, 27321: 2331284, 27323: 2331468, 27352: 2331714}
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | --------------------------------------------------
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | 
[2025-11-26 01:18:31] 2025-11-26 06:17:57,703 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-26 01:18:31] 2025-11-26 06:17:57,754 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,754 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,754 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,754 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,754 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,754 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,754 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | job 6895352291 has completed (purged errors)
[2025-11-26 01:18:31] 2025-11-26 06:17:57,755 | INFO     | overall cleanup function is called
[2025-11-26 01:18:31] 2025-11-26 06:17:58,780 | INFO     | --- collectZombieJob: --- 10, [1504722]
[2025-11-26 01:18:31] 2025-11-26 06:17:58,780 | INFO     | zombie collector waiting for pid 1504722
[2025-11-26 01:18:31] 2025-11-26 06:17:58,780 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 01:18:31] 2025-11-26 06:17:58,780 | INFO     | collected zombie processes
[2025-11-26 01:18:31] 2025-11-26 06:17:58,780 | INFO     | will attempt to kill all subprocesses of pid=1504722
[2025-11-26 01:18:31] 2025-11-26 06:18:01,194 | INFO     | process IDs to be killed: [1504722] (in reverse order)
[2025-11-26 01:18:31] 2025-11-26 06:18:01,557 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 01:18:31] 2025-11-26 06:18:01,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 01:18:31] 2025-11-26 06:18:01,622 | INFO     | did not find any defunct processes belonging to 1504722
[2025-11-26 01:18:31] 2025-11-26 06:18:01,737 | INFO     | did not find any defunct processes belonging to 1504722
[2025-11-26 01:18:31] 2025-11-26 06:18:01,769 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 01:18:31] 2025-11-26 06:18:01,769 | INFO     | ready for new job
[2025-11-26 01:18:31] 2025-11-26 06:18:01,770 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 01:18:31] 2025-11-26 06:18:01,771 | INFO     | ***************************************
[2025-11-26 01:18:31] 2025-11-26 06:18:01,772 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 01:18:31] 2025-11-26 06:18:01,772 | INFO     | ***************************************
[2025-11-26 01:18:31] 2025-11-26 06:18:01,772 | INFO     | 
[2025-11-26 01:18:31] 2025-11-26 06:18:01,782 | INFO     | architecture information:
[2025-11-26 01:18:31] 2025-11-26 06:18:01,826 | INFO     | executing command: cat /etc/os-release
[2025-11-26 01:18:31] 2025-11-26 06:18:01,930 | INFO     | cat /etc/os-release:
[2025-11-26 01:18:31] NAME="CentOS Linux"
[2025-11-26 01:18:31] VERSION="7 (Core)"
[2025-11-26 01:18:31] ID="centos"
[2025-11-26 01:18:31] ID_LIKE="rhel fedora"
[2025-11-26 01:18:31] VERSION_ID="7"
[2025-11-26 01:18:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 01:18:31] ANSI_COLOR="0;31"
[2025-11-26 01:18:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 01:18:31] HOME_URL="https://www.centos.org/"
[2025-11-26 01:18:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 01:18:31] 
[2025-11-26 01:18:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 01:18:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 01:18:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 01:18:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 01:18:31] 
[2025-11-26 01:18:31] 2025-11-26 06:18:01,931 | INFO     | ***************************************
[2025-11-26 01:18:31] 2025-11-26 06:18:02,436 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-26 01:18:31] 2025-11-26 06:18:02,500 | INFO     | sufficient remaining disk space (79837528064 B)
[2025-11-26 01:18:31] 2025-11-26 06:18:02,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 01:18:31] 2025-11-26 06:18:02,501 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 01:18:31] 2025-11-26 06:18:02,501 | INFO     | update_server=False
[2025-11-26 01:18:31] 2025-11-26 06:18:02,501 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 01:18:31] 2025-11-26 06:18:02,501 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:18:31] 2025-11-26 06:18:02,501 | INFO     | aborting loop
[2025-11-26 01:18:31] 2025-11-26 06:18:02,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:18:31] 2025-11-26 06:18:02,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 01:18:31] 2025-11-26 06:18:02,899 | INFO     | all payload control threads have been joined
[2025-11-26 01:18:31] 2025-11-26 06:18:03,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 01:18:31] 2025-11-26 06:18:03,180 | INFO     | all data control threads have been joined
[2025-11-26 01:18:31] 2025-11-26 06:18:03,414 | INFO     | all job control threads have been joined
[2025-11-26 01:18:31] 2025-11-26 06:18:03,507 | INFO     | [job] job monitor thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:03,527 | INFO     | [job] queue monitor thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:03,534 | INFO     | [job] retrieve thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:03,590 | INFO     | [payload] validate_post thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:03,874 | INFO     | [payload] failed_post thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:03,904 | INFO     | [payload] control thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:03,966 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:04,187 | INFO     | [data] control thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:04,247 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:04,423 | INFO     | [job] control thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:04,755 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:04,762 | INFO     | [job] validate thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:04,763 | INFO     | [data] copytool_in thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:04,843 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:05,103 | INFO     | [data] copytool_out thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:06,532 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 01:18:31] 2025-11-26 06:18:19,072 | INFO     | [monitor] cgroup control has ended
[2025-11-26 01:18:31] 2025-11-26 06:18:20,049 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140429672585024)>', '<ExcThread(monitor, started 140428552681216)>']
[2025-11-26 01:18:31] 2025-11-26 06:18:25,075 | INFO     | all workflow threads have been joined
[2025-11-26 01:18:31] 2025-11-26 06:18:25,075 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 01:18:31] 2025-11-26 06:18:25,075 | INFO     | traces error code: 0
[2025-11-26 01:18:31] 2025-11-26 06:18:25,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 01:18:31] 2025-11-26 06:18:30,204 | INFO     | PID=1486948 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 01:18:31] 2025-11-26 06:18:30,204 | INFO     | .. there are 99 such processes running
[2025-11-26 01:18:31] 2025-11-26 06:18:30,205 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 01:18:31] 2025-11-26 06:18:30,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 01:18:31] 2025-11-26 06:18:30,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 01:18:31] 2025-11-26 06:18:30,205 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 01:18:31] 2025-11-26 06:18:30,205 | INFO     | [monitor] control thread has ended
[2025-11-26 01:18:31] 2025-11-26 06:18:30,423 [wrapper] ==== pilot stdout END ====
[2025-11-26 01:18:31] 2025-11-26 06:18:30,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 01:18:31] 2025-11-26 06:18:30,477 [wrapper] pilotpid: 1486948
[2025-11-26 01:18:31] 2025-11-26 06:18:30,505 [wrapper] Pilot exit status: 0
[2025-11-26 01:18:31] 2025-11-26 06:18:30,607 [wrapper] pandaids: 6895352291
[2025-11-26 01:18:31] 2025-11-26 06:18:30,818 [wrapper] cleanup supervisor_pilot 2266604 1486949
[2025-11-26 01:18:31] 2025-11-26 06:18:30,842 [wrapper] Test setup, not cleaning
[2025-11-26 01:18:31] 2025-11-26 06:18:30,865 [wrapper] apfmon messages muted
[2025-11-26 01:18:31] 2025-11-26 06:18:30,868 [wrapper] ==== wrapper stdout END ====
[2025-11-26 01:18:31] 2025-11-26 06:18:30,870 [wrapper] ==== wrapper stderr END ====
[2025-11-26 01:18:31]  *** Error codes and diagnostics ***
[2025-11-26 01:18:31]     "exeErrorCode": 0,
[2025-11-26 01:18:31]     "exeErrorDiag": "",
[2025-11-26 01:18:31]     "pilotErrorCode": 0,
[2025-11-26 01:18:31]     "pilotErrorDiag": "",
[2025-11-26 01:18:31]  *** Listing of results directory ***
[2025-11-26 01:18:31] total 1313412
[2025-11-26 01:18:31] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 21:46 pilot3.tar.gz
[2025-11-26 01:18:31] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 21:48 queuedata.json
[2025-11-26 01:18:31] -rwx------. 1 boincer umatlas     36292 Nov 22 21:49 runpilot2-wrapper.sh
[2025-11-26 01:18:31] -rw-r--r--. 1 boincer umatlas       100 Nov 25 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 01:18:31] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 17:41 run_atlas
[2025-11-26 01:18:31] -rw-r--r--. 1 boincer umatlas       105 Nov 25 17:41 job.xml
[2025-11-26 01:18:31] -rw-r--r--. 2 boincer umatlas 412567276 Nov 25 17:41 EVNT.47483658._000586.pool.root.1
[2025-11-26 01:18:31] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:41 start_atlas.sh
[2025-11-26 01:18:31] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 17:41 shared
[2025-11-26 01:18:31] -rw-r--r--. 2 boincer umatlas    590106 Nov 25 17:41 input.tar.gz
[2025-11-26 01:18:31] -rw-r--r--. 1 boincer umatlas         0 Nov 25 17:41 boinc_lockfile
[2025-11-26 01:18:31] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 17:41 pandaJob.out
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas        57 Nov 25 17:41 setup.sh.local
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas    991877 Nov 25 17:41 agis_schedconf.cvmfs.json
[2025-11-26 01:18:31] drwx------. 5 boincer umatlas      4096 Nov 25 17:41 pilot3
[2025-11-26 01:18:31] -rw-r--r--. 1 boincer umatlas       532 Nov 26 01:02 boinc_task_state.xml
[2025-11-26 01:18:31] -rw-r--r--. 1 boincer umatlas      7171 Nov 26 01:13 init_data.xml
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas 917964355 Nov 26 01:16 HITS.47556137._005820.pool.root.1
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas      1075 Nov 26 01:17 memory_monitor_summary.json
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas   1516240 Nov 26 01:17 agis_ddmendpoints.agis.ALL.json
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas   1711491 Nov 26 01:17 log.47556137._005820.job.log.tgz.1
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas        95 Nov 26 01:17 pilot_heartbeat.json
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas      8632 Nov 26 01:17 heartbeat.json
[2025-11-26 01:18:31] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 01:18 boinc_mmap_file
[2025-11-26 01:18:31] -rw-r--r--. 1 boincer umatlas        29 Nov 26 01:18 wrapper_checkpoint.txt
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas       823 Nov 26 01:18 pilotlog.txt
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas   3530595 Nov 26 01:18 log.47556137._005820.job.log.1
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas       353 Nov 26 01:18 output.list
[2025-11-26 01:18:31] -rw-r--r--. 1 boincer umatlas       620 Nov 26 01:18 runtime_log
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas   5263360 Nov 26 01:18 result.tar.gz
[2025-11-26 01:18:31] -rw-r--r--. 1 boincer umatlas      9333 Nov 26 01:18 runtime_log.err
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas       663 Nov 26 01:18 DB8NDmeLFh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5YKKDmpQvYUm.diag
[2025-11-26 01:18:31] -rw-r--r--. 1 boincer umatlas     21139 Nov 26 01:18 stderr.txt
[2025-11-26 01:18:31] HITS file was successfully produced:
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas 917964355 Nov 26 01:16 shared/HITS.pool.root.1
[2025-11-26 01:18:31]  *** Contents of shared directory: ***
[2025-11-26 01:18:31] total 1305096
[2025-11-26 01:18:31] -rw-r--r--. 2 boincer umatlas 412567276 Nov 25 17:41 ATLAS.root_0
[2025-11-26 01:18:31] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:41 start_atlas.sh
[2025-11-26 01:18:31] -rw-r--r--. 2 boincer umatlas    590106 Nov 25 17:41 input.tar.gz
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas 917964355 Nov 26 01:16 HITS.pool.root.1
[2025-11-26 01:18:31] -rw-------. 1 boincer umatlas   5263360 Nov 26 01:18 result.tar.gz
01:18:33 (1478253): run_atlas exited; CPU time 136592.916604
01:18:33 (1478253): called boinc_finish(0)

</stderr_txt>
]]>

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