Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:22:14 (15591): wrapper (7.7.26015): starting
18:22:14 (15591): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 18:22:14] Arguments: --nthreads 12
[2025-11-25 18:22:14] Threads: 12
[2025-11-25 18:22:14] Checking for CVMFS
[2025-11-25 18:22:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 18:22:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 18:22:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 18:22:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 18:22:14] 2.11.2.0 3035 286850 95188 153302 3 80 17659748 20275201 1 130560 3 128743037 99.968 17083087 14270 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 18:22:14] CVMFS is ok
[2025-11-25 18:22:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 18:22:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 18:22:14] Further information can be found at the LHC@home message board.
[2025-11-25 18:22:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 18:22:14] Checking for apptainer binary...
[2025-11-25 18:22:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 18:22:14] Running /usr/bin/apptainer --version
[2025-11-25 18:22:14] apptainer version 1.3.2-1.el7
[2025-11-25 18:22:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 18:22:16] c-205-31.aglt2.org
[2025-11-25 18:22:16] apptainer works
[2025-11-25 18:22:16] Set ATHENA_PROC_NUMBER=12
[2025-11-25 18:22:16] Set ATHENA_CORE_NUMBER=12
[2025-11-25 18:22:16] Starting ATLAS job with PandaID=6894238295
[2025-11-25 18:22:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:01:15]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:01:15] 2025-11-26 03:00:42,310 | INFO     | time since job start (13091s) is within the limit (172800.0s)
[2025-11-25 22:01:15] 2025-11-26 03:00:42,750 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 22:01:15] 2025-11-26 03:00:42,754 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-11-25 22:01:15] 2025-11-26 03:00:42,756 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894238295/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 22:01:15] 2025-11-26 03:00:42,756 | INFO     | extracted standard info from prmon json
[2025-11-25 22:01:15] 2025-11-26 03:00:42,757 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 22:01:15] 2025-11-26 03:00:42,757 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 22:01:15] 2025-11-26 03:00:42,757 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 22:01:15] 2025-11-26 03:00:42,757 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 22:01:15] 2025-11-26 03:00:42,762 | INFO     | fitting pss+swap vs Time
[2025-11-25 22:01:15] 2025-11-26 03:00:42,762 | INFO     | sum of square deviations: 3038856977.5
[2025-11-25 22:01:15] 2025-11-26 03:00:42,764 | INFO     | sum of deviations: 885961194.000005
[2025-11-25 22:01:15] 2025-11-26 03:00:42,764 | INFO     | mean x: 1764119475.5
[2025-11-25 22:01:15] 2025-11-26 03:00:42,764 | INFO     | mean y: 2762338.140186916
[2025-11-25 22:01:15] 2025-11-26 03:00:42,764 | INFO     | intersect: -511556502.28067416
[2025-11-25 22:01:15] 2025-11-26 03:00:42,764 | INFO     | chi2: 1.7390155321962606
[2025-11-25 22:01:15] 2025-11-26 03:00:42,765 | INFO     | sum of square deviations: 2830787960.0
[2025-11-25 22:01:15] 2025-11-26 03:00:42,766 | INFO     | sum of deviations: 1082389368.0000021
[2025-11-25 22:01:15] 2025-11-26 03:00:42,766 | INFO     | mean x: 1764119323.0
[2025-11-25 22:01:15] 2025-11-26 03:00:42,766 | INFO     | mean y: 2762482.7033492825
[2025-11-25 22:01:15] 2025-11-26 03:00:42,766 | INFO     | intersect: -671771967.0964732
[2025-11-25 22:01:15] 2025-11-26 03:00:42,767 | INFO     | chi2: 1.7394078412041336
[2025-11-25 22:01:15] 2025-11-26 03:00:42,767 | INFO     | current chi2=1.7394078412041336 (change=-0.022559258420053043 %)
[2025-11-25 22:01:15] 2025-11-26 03:00:42,767 | INFO     | right removable region: 208
[2025-11-25 22:01:15] 2025-11-26 03:00:42,767 | INFO     | sum of square deviations: 2830787960.0
[2025-11-25 22:01:15] 2025-11-26 03:00:42,768 | INFO     | sum of deviations: -35839485733.00001
[2025-11-25 22:01:15] 2025-11-26 03:00:42,768 | INFO     | mean x: 1764119628.0
[2025-11-25 22:01:15] 2025-11-26 03:00:42,769 | INFO     | mean y: 2789001.272727273
[2025-11-25 22:01:15] 2025-11-26 03:00:42,769 | INFO     | intersect: 22337609246.52037
[2025-11-25 22:01:15] 2025-11-26 03:00:42,769 | INFO     | chi2: 0.29287627935861266
[2025-11-25 22:01:15] 2025-11-26 03:00:42,769 | INFO     | current chi2=0.29287627935861266 (change=83.15850123611436 %)
[2025-11-25 22:01:15] 2025-11-26 03:00:42,769 | INFO     | sum of square deviations: 2632440055.0
[2025-11-25 22:01:15] 2025-11-26 03:00:42,770 | INFO     | sum of deviations: -47580469974.5
[2025-11-25 22:01:15] 2025-11-26 03:00:42,771 | INFO     | mean x: 1764119780.5
[2025-11-25 22:01:15] 2025-11-26 03:00:42,771 | INFO     | mean y: 2798029.3284313725
[2025-11-25 22:01:15] 2025-11-26 03:00:42,771 | INFO     | intersect: 31888670639.44634
[2025-11-25 22:01:15] 2025-11-26 03:00:42,771 | INFO     | chi2: 0.1573140209185671
[2025-11-25 22:01:15] 2025-11-26 03:00:42,771 | INFO     | current chi2=0.1573140209185671 (change=46.28652710862125 %)
[2025-11-25 22:01:15] 2025-11-26 03:00:42,772 | INFO     | sum of square deviations: 2443580700.0
[2025-11-25 22:01:15] 2025-11-26 03:00:42,773 | INFO     | sum of deviations: -44046226324.00002
[2025-11-25 22:01:15] 2025-11-26 03:00:42,773 | INFO     | mean x: 1764119933.0
[2025-11-25 22:01:15] 2025-11-26 03:00:42,773 | INFO     | mean y: 2795166.2110552764
[2025-11-25 22:01:15] 2025-11-26 03:00:42,773 | INFO     | intersect: 31801550914.93577
[2025-11-25 22:01:15] 2025-11-26 03:00:42,773 | INFO     | chi2: 0.15688537549787895
[2025-11-25 22:01:15] 2025-11-26 03:00:42,773 | INFO     | current chi2=0.15688537549787895 (change=0.2724775695041465 %)
[2025-11-25 22:01:15] 2025-11-26 03:00:42,774 | INFO     | left removable region: 30
[2025-11-25 22:01:15] 2025-11-26 03:00:42,774 | INFO     | sum of square deviations: 1748737904.5
[2025-11-25 22:01:15] 2025-11-26 03:00:42,775 | INFO     | sum of deviations: -25045314089.499996
[2025-11-25 22:01:15] 2025-11-26 03:00:42,775 | INFO     | mean x: 1764120207.5
[2025-11-25 22:01:15] 2025-11-26 03:00:42,775 | INFO     | mean y: 2779561.129213483
[2025-11-25 22:01:15] 2025-11-26 03:00:42,775 | INFO     | intersect: 25268398025.037457
[2025-11-25 22:01:15] 2025-11-26 03:00:42,776 | INFO     | chi2: 0.13031507159150793
[2025-11-25 22:01:15] 2025-11-26 03:00:42,776 | INFO     | current memory leak: -14.32 B/s (using 178 data points, chi2=0.13)
[2025-11-25 22:01:15] 2025-11-26 03:00:42,776 | INFO     | could have reported an average CPU frequency of 2280 MHz (11 samples)
[2025-11-25 22:01:15] 2025-11-26 03:00:42,776 | INFO     | ..............................
[2025-11-25 22:01:15] 2025-11-26 03:00:42,776 | INFO     | . Timing measurements:
[2025-11-25 22:01:15] 2025-11-26 03:00:42,776 | INFO     | . get job = 0 s
[2025-11-25 22:01:15] 2025-11-26 03:00:42,777 | INFO     | . initial setup = 2 s
[2025-11-25 22:01:15] 2025-11-26 03:00:42,777 | INFO     | . payload setup = 7 s
[2025-11-25 22:01:15] 2025-11-26 03:00:42,777 | INFO     | . stage-in = 0 s
[2025-11-25 22:01:15] 2025-11-26 03:00:42,777 | INFO     | . payload execution = 13055 s
[2025-11-25 22:01:15] 2025-11-26 03:00:42,777 | INFO     | . stage-out = 2 s
[2025-11-25 22:01:15] 2025-11-26 03:00:42,777 | INFO     | . log creation = 0 s
[2025-11-25 22:01:15] 2025-11-26 03:00:42,777 | INFO     | ..............................
[2025-11-25 22:01:15] 2025-11-26 03:00:42,857 | INFO     | 
[2025-11-25 22:01:15] 2025-11-26 03:00:42,857 | INFO     | job summary report
[2025-11-25 22:01:15] 2025-11-26 03:00:42,865 | INFO     | --------------------------------------------------
[2025-11-25 22:01:15] 2025-11-26 03:00:42,865 | INFO     | PanDA job id: 6894238295
[2025-11-25 22:01:15] 2025-11-26 03:00:42,865 | INFO     | task id: 47523675
[2025-11-25 22:01:15] 2025-11-26 03:00:42,865 | INFO     | errors: (none)
[2025-11-25 22:01:15] 2025-11-26 03:00:42,866 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 22:01:15] 2025-11-26 03:00:42,866 | INFO     | pilot state: finished 
[2025-11-25 22:01:15] 2025-11-26 03:00:42,866 | INFO     | transexitcode: 0
[2025-11-25 22:01:15] 2025-11-26 03:00:42,866 | INFO     | exeerrorcode: 0
[2025-11-25 22:01:15] 2025-11-26 03:00:42,866 | INFO     | exeerrordiag: 
[2025-11-25 22:01:15] 2025-11-26 03:00:42,866 | INFO     | exitcode: 0
[2025-11-25 22:01:15] 2025-11-26 03:00:42,866 | INFO     | exitmsg: OK
[2025-11-25 22:01:15] 2025-11-26 03:00:42,866 | INFO     | cpuconsumptiontime: 146481 s
[2025-11-25 22:01:15] 2025-11-26 03:00:42,866 | INFO     | nevents: 400
[2025-11-25 22:01:15] 2025-11-26 03:00:42,867 | INFO     | neventsw: 0
[2025-11-25 22:01:15] 2025-11-26 03:00:42,867 | INFO     | pid: 25666
[2025-11-25 22:01:15] 2025-11-26 03:00:42,867 | INFO     | pgrp: 25666
[2025-11-25 22:01:15] 2025-11-26 03:00:42,867 | INFO     | corecount: 12
[2025-11-25 22:01:15] 2025-11-26 03:00:42,867 | INFO     | event service: False
[2025-11-25 22:01:15] 2025-11-26 03:00:42,867 | INFO     | sizes: {0: 2283780, 1: 2283979, 6: 2284241, 11: 2284269, 13066: 2314377, 13067: 2314376, 13069: 2323558, 13071: 2323614, 13076: 2323808}
[2025-11-25 22:01:15] 2025-11-26 03:00:42,867 | INFO     | --------------------------------------------------
[2025-11-25 22:01:15] 2025-11-26 03:00:42,867 | INFO     | 
[2025-11-25 22:01:15] 2025-11-26 03:00:42,867 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 22:01:15] 2025-11-26 03:00:42,889 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,890 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,890 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,890 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,892 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,892 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,892 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 22:01:15] 2025-11-26 03:00:42,893 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,893 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 22:01:15] 2025-11-26 03:00:42,893 | INFO     | job 6894238295 has completed (purged errors)
[2025-11-25 22:01:15] 2025-11-26 03:00:42,893 | INFO     | overall cleanup function is called
[2025-11-25 22:01:15] 2025-11-26 03:00:43,901 | INFO     | --- collectZombieJob: --- 10, [25666]
[2025-11-25 22:01:15] 2025-11-26 03:00:43,902 | INFO     | zombie collector waiting for pid 25666
[2025-11-25 22:01:15] 2025-11-26 03:00:43,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 22:01:15] 2025-11-26 03:00:43,902 | INFO     | collected zombie processes
[2025-11-25 22:01:15] 2025-11-26 03:00:43,902 | INFO     | will attempt to kill all subprocesses of pid=25666
[2025-11-25 22:01:15] 2025-11-26 03:00:43,993 | INFO     | process IDs to be killed: [25666] (in reverse order)
[2025-11-25 22:01:15] 2025-11-26 03:00:44,044 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 22:01:15] 2025-11-26 03:00:44,044 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 22:01:15] 2025-11-26 03:00:44,048 | INFO     | did not find any defunct processes belonging to 25666
[2025-11-25 22:01:15] 2025-11-26 03:00:44,052 | INFO     | did not find any defunct processes belonging to 25666
[2025-11-25 22:01:15] 2025-11-26 03:00:44,055 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 22:01:15] 2025-11-26 03:00:44,055 | INFO     | ready for new job
[2025-11-25 22:01:15] 2025-11-26 03:00:44,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 22:01:15] 2025-11-26 03:00:44,056 | INFO     | ***************************************
[2025-11-25 22:01:15] 2025-11-26 03:00:44,056 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 22:01:15] 2025-11-26 03:00:44,057 | INFO     | ***************************************
[2025-11-25 22:01:15] 2025-11-26 03:00:44,057 | INFO     | 
[2025-11-25 22:01:15] 2025-11-26 03:00:44,057 | INFO     | architecture information:
[2025-11-25 22:01:15] 2025-11-26 03:00:44,058 | INFO     | executing command: cat /etc/os-release
[2025-11-25 22:01:15] 2025-11-26 03:00:44,074 | INFO     | cat /etc/os-release:
[2025-11-25 22:01:15] NAME="CentOS Linux"
[2025-11-25 22:01:15] VERSION="7 (Core)"
[2025-11-25 22:01:15] ID="centos"
[2025-11-25 22:01:15] ID_LIKE="rhel fedora"
[2025-11-25 22:01:15] VERSION_ID="7"
[2025-11-25 22:01:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 22:01:15] ANSI_COLOR="0;31"
[2025-11-25 22:01:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 22:01:15] HOME_URL="https://www.centos.org/"
[2025-11-25 22:01:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 22:01:15] 
[2025-11-25 22:01:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 22:01:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:01:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:01:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:01:15] 
[2025-11-25 22:01:15] 2025-11-26 03:00:44,074 | INFO     | ***************************************
[2025-11-25 22:01:15] 2025-11-26 03:00:44,577 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 22:01:15] 2025-11-26 03:00:44,639 | INFO     | sufficient remaining disk space (29089595392 B)
[2025-11-25 22:01:15] 2025-11-26 03:00:44,639 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:01:15] 2025-11-26 03:00:44,639 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:01:15] 2025-11-26 03:00:44,639 | INFO     | update_server=False
[2025-11-25 22:01:15] 2025-11-26 03:00:44,640 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:01:15] 2025-11-26 03:00:44,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:01:15] 2025-11-26 03:00:44,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:01:15] 2025-11-26 03:00:44,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:01:15] 2025-11-26 03:00:44,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:01:15] 2025-11-26 03:00:44,753 | INFO     | aborting loop
[2025-11-25 22:01:15] 2025-11-26 03:00:45,558 | INFO     | all job control threads have been joined
[2025-11-25 22:01:15] 2025-11-26 03:00:45,616 | INFO     | all data control threads have been joined
[2025-11-25 22:01:15] 2025-11-26 03:00:45,645 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:45,646 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:45,757 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:45,879 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:46,010 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:46,099 | INFO     | all payload control threads have been joined
[2025-11-25 22:01:15] 2025-11-26 03:00:46,133 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:46,258 | INFO     | [job] validate thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:46,564 | INFO     | [job] control thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:46,617 | INFO     | [data] control thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:46,646 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:46,695 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:46,784 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:47,009 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:47,101 | INFO     | [payload] control thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:48,647 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:51,661 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:01:15] 2025-11-26 03:00:55,047 | INFO     | job.realtimelogging is not enabled
[2025-11-25 22:01:15] 2025-11-26 03:00:56,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:01:15] 2025-11-26 03:00:57,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140194535810880)>', '<ExcThread(monitor, started 140193923307264)>']
[2025-11-25 22:01:15] 2025-11-26 03:01:02,481 | INFO     | all workflow threads have been joined
[2025-11-25 22:01:15] 2025-11-26 03:01:02,482 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:01:15] 2025-11-26 03:01:02,483 | INFO     | traces error code: 0
[2025-11-25 22:01:15] 2025-11-26 03:01:02,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:01:15] 2025-11-26 03:01:15,520 | INFO     | PID=19291 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 22:01:15] 2025-11-26 03:01:15,520 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:01:15] 2025-11-26 03:01:15,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:01:15] 2025-11-26 03:01:15,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:01:15] 2025-11-26 03:01:15,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:01:15] 2025-11-26 03:01:15,521 | INFO     | [monitor] control thread has ended
[2025-11-25 22:01:15] 2025-11-26 03:01:15,623 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:01:15] 2025-11-26 03:01:15,627 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:01:15] 2025-11-26 03:01:15,630 [wrapper] pilotpid: 19291
[2025-11-25 22:01:15] 2025-11-26 03:01:15,634 [wrapper] Pilot exit status: 0
[2025-11-25 22:01:15] 2025-11-26 03:01:15,649 [wrapper] pandaids: 6894238295
[2025-11-25 22:01:15] 2025-11-26 03:01:15,689 [wrapper] cleanup supervisor_pilot  7752 19292
[2025-11-25 22:01:15] 2025-11-26 03:01:15,693 [wrapper] Test setup, not cleaning
[2025-11-25 22:01:15] 2025-11-26 03:01:15,697 [wrapper] apfmon messages muted
[2025-11-25 22:01:15] 2025-11-26 03:01:15,701 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:01:15] 2025-11-26 03:01:15,704 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:01:15]  *** Error codes and diagnostics ***
[2025-11-25 22:01:15]     "exeErrorCode": 0,
[2025-11-25 22:01:15]     "exeErrorDiag": "",
[2025-11-25 22:01:15]     "pilotErrorCode": 0,
[2025-11-25 22:01:15]     "pilotErrorDiag": "",
[2025-11-25 22:01:15]  *** Listing of results directory ***
[2025-11-25 22:01:15] total 612580
[2025-11-25 22:01:15] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 21:13 pilot3.tar.gz
[2025-11-25 22:01:15] -rwx------ 1 boincer umatlas     36292 Nov 24 21:47 runpilot2-wrapper.sh
[2025-11-25 22:01:15] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 21:47 queuedata.json
[2025-11-25 22:01:15] -rw-r--r-- 1 boincer umatlas       100 Nov 25 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:01:15] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 18:22 run_atlas
[2025-11-25 22:01:15] -rw-r--r-- 1 boincer umatlas       105 Nov 25 18:22 job.xml
[2025-11-25 22:01:15] -rw-r--r-- 2 boincer umatlas 282249824 Nov 25 18:22 EVNT.47523673._000003.pool.root.1
[2025-11-25 22:01:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 18:22 start_atlas.sh
[2025-11-25 22:01:15] drwxrwx--x 2 boincer umatlas      4096 Nov 25 18:22 shared
[2025-11-25 22:01:15] -rw-r--r-- 2 boincer umatlas    589945 Nov 25 18:22 input.tar.gz
[2025-11-25 22:01:15] -rw-r--r-- 1 boincer umatlas         0 Nov 25 18:22 boinc_lockfile
[2025-11-25 22:01:15] -rw-r--r-- 1 boincer umatlas      2614 Nov 25 18:22 pandaJob.out
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas        57 Nov 25 18:22 setup.sh.local
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas    991877 Nov 25 18:22 agis_schedconf.cvmfs.json
[2025-11-25 22:01:15] drwx------ 5 boincer umatlas      4096 Nov 25 18:22 pilot3
[2025-11-25 22:01:15] -rw-r--r-- 1 boincer umatlas      5956 Nov 25 21:54 init_data.xml
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas 336452552 Nov 25 21:59 HITS.47523675._000075.pool.root.1
[2025-11-25 22:01:15] -rw-r--r-- 1 boincer umatlas       532 Nov 25 22:00 boinc_task_state.xml
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas      1052 Nov 25 22:00 memory_monitor_summary.json
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas        95 Nov 25 22:00 pilot_heartbeat.json
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas   1516240 Nov 25 22:00 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas    519158 Nov 25 22:00 log.47523675._000075.job.log.tgz.1
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas      7850 Nov 25 22:00 heartbeat.json
[2025-11-25 22:01:15] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 22:01 boinc_mmap_file
[2025-11-25 22:01:15] -rw-r--r-- 1 boincer umatlas        29 Nov 25 22:01 wrapper_checkpoint.txt
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas       745 Nov 25 22:01 pilotlog.txt
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas   1813641 Nov 25 22:01 log.47523675._000075.job.log.1
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas       357 Nov 25 22:01 output.list
[2025-11-25 22:01:15] -rw-r--r-- 1 boincer umatlas       620 Nov 25 22:01 runtime_log
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas   2355200 Nov 25 22:01 result.tar.gz
[2025-11-25 22:01:15] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 22:01 runtime_log.err
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas       665 Nov 25 22:01 JebMDmYGyh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm73LKDmkdO7Yn.diag
[2025-11-25 22:01:15] -rw-r--r-- 1 boincer umatlas     21208 Nov 25 22:01 stderr.txt
[2025-11-25 22:01:15] HITS file was successfully produced:
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas 336452552 Nov 25 21:59 shared/HITS.pool.root.1
[2025-11-25 22:01:15]  *** Contents of shared directory: ***
[2025-11-25 22:01:15] total 607108
[2025-11-25 22:01:15] -rw-r--r-- 2 boincer umatlas 282249824 Nov 25 18:22 ATLAS.root_0
[2025-11-25 22:01:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 18:22 start_atlas.sh
[2025-11-25 22:01:15] -rw-r--r-- 2 boincer umatlas    589945 Nov 25 18:22 input.tar.gz
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas 336452552 Nov 25 21:59 HITS.pool.root.1
[2025-11-25 22:01:15] -rw------- 1 boincer umatlas   2355200 Nov 25 22:01 result.tar.gz
22:01:16 (15591): run_atlas exited; CPU time 146455.268737
22:01:16 (15591): called boinc_finish(0)

</stderr_txt>
]]>

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