Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-25 23:24:05 (21916): vboxwrapper version 26210
2025-11-25 23:24:05 (21916): BOINC client version: 8.0.2
2025-11-25 23:24:06 (21916): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-11-25 23:24:06 (21916): Successfully copied 'init_data.xml' to the shared directory.
2025-11-25 23:24:06 (21916): Create VM. (boinc_654ae2b1490dd826, slot#1)
2025-11-25 23:24:07 (21916): Setting Memory Size for VM. (6200MB)
2025-11-25 23:24:07 (21916): Setting CPU Count for VM. (4)
2025-11-25 23:24:07 (21916): Setting Chipset Options for VM.
2025-11-25 23:24:08 (21916): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-25 23:24:08 (21916): Setting Boot Options for VM.
2025-11-25 23:24:08 (21916): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-25 23:24:09 (21916): Enabling VM Network Access.
2025-11-25 23:24:09 (21916): Disabling USB Support for VM.
2025-11-25 23:24:09 (21916): Disabling COM Port Support for VM.
2025-11-25 23:24:09 (21916): Disabling LPT Port Support for VM.
2025-11-25 23:24:10 (21916): Disabling Audio Support for VM.
2025-11-25 23:24:10 (21916): Disabling Clipboard Support for VM.
2025-11-25 23:24:10 (21916): Disabling Drag and Drop Support for VM.
2025-11-25 23:24:10 (21916): Adding storage controller(s) to VM.
2025-11-25 23:24:11 (21916): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-25 23:24:11 (21916): Adding VirtualBox Guest Additions to VM.
2025-11-25 23:24:11 (21916): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-25 23:24:12 (21916): forwarding host port 52978 to guest port 80
2025-11-25 23:24:12 (21916): Enabling remote desktop for VM.
2025-11-25 23:24:12 (21916): Enabling shared directory for VM.
2025-11-25 23:24:13 (21916): Starting VM using VBoxManage interface. (boinc_654ae2b1490dd826, slot#1)
2025-11-25 23:24:18 (21916): Successfully started VM. (PID = '22984')
2025-11-25 23:24:18 (21916): Reporting VM Process ID to BOINC.
2025-11-25 23:24:18 (21916): Guest Log: BIOS: VirtualBox 7.0.12
2025-11-25 23:24:18 (21916): Guest Log: CPUID EDX: 0x178bfbff
2025-11-25 23:24:18 (21916): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-25 23:24:18 (21916): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-25 23:24:18 (21916): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-25 23:24:18 (21916): Detected: Web Application Enabled (http://localhost:52978)
2025-11-25 23:24:18 (21916): Detected: Remote Desktop Enabled (localhost:52979)
2025-11-25 23:24:18 (21916): Preference change detected
2025-11-25 23:24:18 (21916): Setting CPU throttle for VM. (100%)
2025-11-25 23:24:19 (21916): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-25 23:24:20 (21916): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-25 23:24:20 (21916): Guest Log: BIOS: Booting from Hard Disk...
2025-11-25 23:24:23 (21916): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-25 23:24:23 (21916): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-25 23:24:23 (21916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-25 23:24:26 (21916): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-25 23:24:26 (21916): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-25 23:24:29 (21916): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-25 23:24:29 (21916): Guest Log: 00:00:00.000079 main     Log opened 2025-11-25T23:24:27.792808000Z
2025-11-25 23:24:29 (21916): Guest Log: 00:00:00.000144 main     OS Product: Linux
2025-11-25 23:24:29 (21916): Guest Log: 00:00:00.000168 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-25 23:24:29 (21916): Guest Log: 00:00:00.000186 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-25 23:24:29 (21916): Guest Log: 00:00:00.000203 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-25 23:24:29 (21916): Guest Log: 00:00:00.000204 main     Process ID: 1361
2025-11-25 23:24:29 (21916): Guest Log: 00:00:00.000204 main     Package type: LINUX_64BITS_GENERIC
2025-11-25 23:24:29 (21916): Guest Log: 00:00:00.001013 main     5.2.32 r132073 started. Verbose level = 0
2025-11-25 23:24:30 (21916): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-25 23:24:30 (21916): Guest Log: [INFO] Mounting shared directory
2025-11-25 23:24:30 (21916): Guest Log: [INFO] Checking for init_data.xml
2025-11-25 23:24:33 (21916): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-25 23:24:33 (21916): Guest Log: [INFO] Detected branch: prod
2025-11-25 23:24:33 (21916): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-25 23:24:33 (21916): Guest Log: Copying input files
2025-11-25 23:24:34 (21916): Guest Log: Copied input files into RunAtlas.
2025-11-25 23:24:35 (21916): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-11-25 23:24:39 (21916): Guest Log: 00:00:10.003392 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 913 084 000ns (GuestNow=1 764 109 479 882 003 000 ns GuestLast=1 764 113 067 795 087 000 ns fSetTimeLastLoop=true )
2025-11-25 23:24:43 (21916): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-25 23:24:43 (21916): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-25 23:24:43 (21916): Guest Log: 2.6.3.0 1633 0 29552 153300 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-11-25 23:24:43 (21916): Guest Log: copied the webapp to /var/www
2025-11-25 23:24:43 (21916): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-25 23:24:43 (21916): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-25 23:24:43 (21916): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-25 23:24:43 (21916): Guest Log:  *** Starting ATLAS job. (PandaID=6894238294 taskID=47523675) ***
2025-11-26 01:04:23 (21916): Status Report: Elapsed Time: '6000.000000'
2025-11-26 01:04:23 (21916): Status Report: CPU Time: '22093.234375'
2025-11-26 02:44:27 (21916): Status Report: Elapsed Time: '12000.000000'
2025-11-26 02:44:27 (21916): Status Report: CPU Time: '46015.453125'
2025-11-26 03:05:55 (21916): Guest Log:  *** Job finished ***
2025-11-26 03:05:55 (21916): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:26,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:26,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:47,072 | INFO     | [monitor] cgroup control has ended
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:49,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962660271936)>', '<ExcThread(monitor, started 139961760208640)>']
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:49,277 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:49,277 | INFO     | [monitor] control thread has ended
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,140 | INFO     | all workflow threads have been joined
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,140 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,140 | INFO     | traces error code: 0
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,183 [wrapper] ==== pilot stdout END ====
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,186 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,190 [wrapper] pilotpid: 6041
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,192 [wrapper] Pilot exit status: 0
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,241 [wrapper] pandaids: 6894238294
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,261 [wrapper] cleanup supervisor_pilot 13378 6042
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,263 [wrapper] Test setup, not cleaning
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,266 [wrapper] apfmon messages muted
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,270 [wrapper] ==== wrapper stdout END ====
2025-11-26 03:05:55 (21916): Guest Log: 2025-11-26 02:05:54,273 [wrapper] ==== wrapper stderr END ====
2025-11-26 03:05:55 (21916): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 03:05:55 (21916): Guest Log:     "exeErrorCode": 0,
2025-11-26 03:05:55 (21916): Guest Log:     "exeErrorDiag": "",
2025-11-26 03:05:55 (21916): Guest Log:     "pilotErrorCode": 0,
2025-11-26 03:05:55 (21916): Guest Log:     "pilotErrorDiag": "",
2025-11-26 03:05:55 (21916): Guest Log:  *** Listing of results directory ***
2025-11-26 03:05:55 (21916): Guest Log: total 340604
2025-11-26 03:05:55 (21916): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 25 02:13 pilot3.tar.gz
2025-11-26 03:05:55 (21916): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 25 02:47 runpilot2-wrapper.sh
2025-11-26 03:05:55 (21916): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 25 02:47 queuedata.json
2025-11-26 03:05:55 (21916): Guest Log: -rwxr-xr-x. 1 atlas atlas      9331 Nov 25 22:24 init_data.xml
2025-11-26 03:05:55 (21916): Guest Log: -rwxr-xr-x. 1 atlas atlas    589947 Nov 25 22:24 input.tar.gz
2025-11-26 03:05:55 (21916): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 25 22:24 start_atlas.sh
2025-11-26 03:05:55 (21916): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 25 22:24 EVNT.47523673._000003.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 03:05:55 (21916): Guest Log: -rw-r--r--. 1 atlas atlas      2614 Nov 25 22:24 pandaJob.out
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas        49 Nov 25 22:24 setup.sh.local
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas    991877 Nov 25 22:25 agis_schedconf.cvmfs.json
2025-11-26 03:05:55 (21916): Guest Log: drwx------. 5 atlas atlas      4096 Nov 25 22:25 pilot3
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas 340609072 Nov 26 02:04 HITS.47523675._000074.pool.root.1
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas      1036 Nov 26 02:04 memory_monitor_summary.json
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 02:04 agis_ddmendpoints.agis.ALL.json
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas    393154 Nov 26 02:04 log.47523675._000074.job.log.tgz.1
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 02:04 pilot_heartbeat.json
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas      7818 Nov 26 02:04 heartbeat.json
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas      4877 Nov 26 02:05 pilotlog.txt
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas   1767254 Nov 26 02:05 log.47523675._000074.job.log.1
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas       357 Nov 26 02:05 output.list
2025-11-26 03:05:55 (21916): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 02:05 runtime_log
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas   2181120 Nov 26 02:05 result.tar.gz
2025-11-26 03:05:55 (21916): Guest Log: -rw-r--r--. 1 atlas atlas      9210 Nov 26 02:05 runtime_log.err
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas       651 Nov 26 02:05 3UaMDmYGyh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm63LKDme9SUrn.diag
2025-11-26 03:05:55 (21916): Guest Log: Looking for outputfile HITS.47523675._000074.pool.root.1
2025-11-26 03:05:55 (21916): Guest Log: HITS file was successfully produced
2025-11-26 03:05:55 (21916): Guest Log: -rw-------. 1 atlas atlas 340609072 Nov 26 02:04 /home/atlas/RunAtlas/HITS.47523675._000074.pool.root.1
2025-11-26 03:05:56 (21916): Guest Log: Successfully finished the ATLAS job!
2025-11-26 03:05:56 (21916): Guest Log: Copying the results back to the shared directory!
2025-11-26 03:05:56 (21916): Guest Log:  *** Contents of shared directory: ***
2025-11-26 03:05:56 (21916): Guest Log: total 610995
2025-11-26 03:05:56 (21916): Guest Log: -rwxrwxrwx. 1 root root 282249824 Nov 25 22:24 ATLAS.root_0
2025-11-26 03:05:56 (21916): Guest Log: -rwxrwxrwx. 1 root root 340609072 Nov 26 02:05 HITS.pool.root.1
2025-11-26 03:05:56 (21916): Guest Log: -rwxrwxrwx. 1 root root      9331 Nov 25 22:24 init_data.xml
2025-11-26 03:05:56 (21916): Guest Log: -rwxrwxrwx. 1 root root    589947 Nov 25 22:23 input.tar.gz
2025-11-26 03:05:56 (21916): Guest Log: -rwxrwxrwx. 1 root root   2181120 Nov 26 02:05 result.tar.gz
2025-11-26 03:05:56 (21916): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 25 22:23 start_atlas.sh
2025-11-26 03:05:56 (21916): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 03:05:56 (21916): VM Completion File Detected.
2025-11-26 03:05:56 (21916): Powering off VM.
2025-11-26 03:05:57 (21916): Successfully stopped VM.
2025-11-26 03:05:57 (21916): Deregistering VM. (boinc_654ae2b1490dd826, slot#1)
2025-11-26 03:05:57 (21916): Removing network bandwidth throttle group from VM.
2025-11-26 03:05:57 (21916): Removing VM from VirtualBox.
2025-11-26 03:06:03 (21916): called boinc_finish(0)

</stderr_txt>
]]>

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