Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:32:29 (3263934): wrapper (7.7.26015): starting
18:32:29 (3263934): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 18:32:29] Arguments: --nthreads 8
[2025-11-25 18:32:29] Threads: 8
[2025-11-25 18:32:29] Checking for CVMFS
[2025-11-25 18:32:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 18:32:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 18:32:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 18:32:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 18:32:30] 2.13.2.0 6914 35064 265552 153302 1 377 36230665 40960000 28044 16776704 0 131662903 99.628 123788940 36378 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 18:32:30] CVMFS is ok
[2025-11-25 18:32:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 18:32:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 18:32:30] Further information can be found at the LHC@home message board.
[2025-11-25 18:32:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 18:32:30] Checking for apptainer binary...
[2025-11-25 18:32:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 18:32:30] Running /usr/bin/apptainer --version
[2025-11-25 18:32:30] apptainer version 1.4.4-1.el9
[2025-11-25 18:32:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 18:32:31] c-212-1.aglt2.org
[2025-11-25 18:32:31] apptainer works
[2025-11-25 18:32:31] Set ATHENA_PROC_NUMBER=8
[2025-11-25 18:32:31] Set ATHENA_CORE_NUMBER=8
[2025-11-25 18:32:31] Starting ATLAS job with PandaID=6896298618
[2025-11-25 18:32:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 15:01:06]  *** The last 200 lines of the pilot log: ***
[2025-11-26 15:01:06] 2025-11-26 20:00:12,683 | INFO     | time since job start (73640s) is within the limit (172800.0s)
[2025-11-26 15:01:06] 2025-11-26 20:00:13,146 | INFO     | monitor loop #4582: job 0:6896298618 is in state 'finished'
[2025-11-26 15:01:06] 2025-11-26 20:00:13,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 15:01:06] 2025-11-26 20:00:13,885 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 15:01:06] 2025-11-26 20:00:13,891 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2976.706364583333
[2025-11-26 15:01:06] 2025-11-26 20:00:13,909 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896298618/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 15:01:06] 2025-11-26 20:00:13,909 | INFO     | extracted standard info from prmon json
[2025-11-26 15:01:06] 2025-11-26 20:00:13,909 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 15:01:06] 2025-11-26 20:00:13,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 15:01:06] 2025-11-26 20:00:13,936 | INFO     | fitting pss+swap vs Time
[2025-11-26 15:01:06] 2025-11-26 20:00:13,937 | INFO     | sum of square deviations: 545234445315.01733
[2025-11-26 15:01:06] 2025-11-26 20:00:13,966 | INFO     | sum of deviations: 3106720959632.0166
[2025-11-26 15:01:06] 2025-11-26 20:00:13,966 | INFO     | mean x: 1764150399.95029
[2025-11-26 15:01:06] 2025-11-26 20:00:13,966 | INFO     | mean y: 2904170.950289975
[2025-11-26 15:01:06] 2025-11-26 20:00:13,966 | INFO     | intersect: -10049144210.369787
[2025-11-26 15:01:06] 2025-11-26 20:00:13,967 | INFO     | chi2: 5.575299101923687
[2025-11-26 15:01:06] 2025-11-26 20:00:13,968 | INFO     | sum of square deviations: 538486659317.9836
[2025-11-26 15:01:06] 2025-11-26 20:00:13,994 | INFO     | sum of deviations: 3485992038094.165
[2025-11-26 15:01:06] 2025-11-26 20:00:13,994 | INFO     | mean x: 1764150247.454243
[2025-11-26 15:01:06] 2025-11-26 20:00:13,995 | INFO     | mean y: 2912738.721297837
[2025-11-26 15:01:06] 2025-11-26 20:00:13,995 | INFO     | intersect: -11417637074.743616
[2025-11-26 15:01:06] 2025-11-26 20:00:13,996 | INFO     | chi2: 2.756326949292636
[2025-11-26 15:01:06] 2025-11-26 20:00:13,996 | INFO     | current chi2=2.756326949292636 (change=50.561810247245745 %)
[2025-11-26 15:01:06] 2025-11-26 20:00:13,997 | INFO     | sum of square deviations: 531794634581.74066
[2025-11-26 15:01:06] 2025-11-26 20:00:14,022 | INFO     | sum of deviations: 3503326457723.1143
[2025-11-26 15:01:06] 2025-11-26 20:00:14,023 | INFO     | mean x: 1764150094.956558
[2025-11-26 15:01:06] 2025-11-26 20:00:14,023 | INFO     | mean y: 2913130.2715121135
[2025-11-26 15:01:06] 2025-11-26 20:00:14,023 | INFO     | intersect: -11618854561.907192
[2025-11-26 15:01:06] 2025-11-26 20:00:14,024 | INFO     | chi2: 2.607638607802202
[2025-11-26 15:01:06] 2025-11-26 20:00:14,024 | INFO     | current chi2=2.607638607802202 (change=5.394437750884102 %)
[2025-11-26 15:01:06] 2025-11-26 20:00:14,024 | INFO     | right removable region: 1196
[2025-11-26 15:01:06] 2025-11-26 20:00:14,025 | INFO     | sum of square deviations: 538486033031.89166
[2025-11-26 15:01:06] 2025-11-26 20:00:14,051 | INFO     | sum of deviations: 2752819611934.623
[2025-11-26 15:01:06] 2025-11-26 20:00:14,051 | INFO     | mean x: 1764150552.4534109
[2025-11-26 15:01:06] 2025-11-26 20:00:14,051 | INFO     | mean y: 2912160.921797005
[2025-11-26 15:01:06] 2025-11-26 20:00:14,051 | INFO     | intersect: -9015684313.819881
[2025-11-26 15:01:06] 2025-11-26 20:00:14,052 | INFO     | chi2: 3.0832910313951576
[2025-11-26 15:01:06] 2025-11-26 20:00:14,052 | INFO     | current chi2=3.0832910313951576 (change=44.69729829685179 %)
[2025-11-26 15:01:06] 2025-11-26 20:00:14,053 | INFO     | sum of square deviations: 531793455694.82733
[2025-11-26 15:01:06] 2025-11-26 20:00:14,080 | INFO     | sum of deviations: 2686186212765.9307
[2025-11-26 15:01:06] 2025-11-26 20:00:14,080 | INFO     | mean x: 1764150704.9573934
[2025-11-26 15:01:06] 2025-11-26 20:00:14,080 | INFO     | mean y: 2913678.6850459483
[2025-11-26 15:01:06] 2025-11-26 20:00:14,080 | INFO     | intersect: -8908134868.736824
[2025-11-26 15:01:06] 2025-11-26 20:00:14,081 | INFO     | chi2: 3.0624983882888097
[2025-11-26 15:01:06] 2025-11-26 20:00:14,081 | INFO     | current chi2=3.0624983882888097 (change=0.6743652446243265 %)
[2025-11-26 15:01:06] 2025-11-26 20:00:14,081 | INFO     | left removable region: 20
[2025-11-26 15:01:06] 2025-11-26 20:00:14,082 | INFO     | sum of square deviations: 504291581160.7719
[2025-11-26 15:01:06] 2025-11-26 20:00:14,107 | INFO     | sum of deviations: 2998064883648.73
[2025-11-26 15:01:06] 2025-11-26 20:00:14,107 | INFO     | mean x: 1764150674.4676871
[2025-11-26 15:01:06] 2025-11-26 20:00:14,107 | INFO     | mean y: 2924453.5586734693
[2025-11-26 15:01:06] 2025-11-26 20:00:14,107 | INFO     | intersect: -10485131235.200901
[2025-11-26 15:01:06] 2025-11-26 20:00:14,108 | INFO     | chi2: 0.073677500360798
[2025-11-26 15:01:06] 2025-11-26 20:00:14,108 | INFO     | current memory leak: 5.95 B/s (using 1176 data points, chi2=0.07)
[2025-11-26 15:01:06] 2025-11-26 20:00:14,110 | INFO     | could have reported an average CPU frequency of 3075 MHz (44 samples)
[2025-11-26 15:01:06] 2025-11-26 20:00:14,110 | INFO     | ..............................
[2025-11-26 15:01:06] 2025-11-26 20:00:14,110 | INFO     | . Timing measurements:
[2025-11-26 15:01:06] 2025-11-26 20:00:14,110 | INFO     | . get job = 0 s
[2025-11-26 15:01:06] 2025-11-26 20:00:14,110 | INFO     | . initial setup = 3 s
[2025-11-26 15:01:06] 2025-11-26 20:00:14,110 | INFO     | . payload setup = 14 s
[2025-11-26 15:01:06] 2025-11-26 20:00:14,110 | INFO     | . stage-in = 0 s
[2025-11-26 15:01:06] 2025-11-26 20:00:14,110 | INFO     | . payload execution = 73591 s
[2025-11-26 15:01:06] 2025-11-26 20:00:14,110 | INFO     | . stage-out = 3 s
[2025-11-26 15:01:06] 2025-11-26 20:00:14,110 | INFO     | . log creation = 0 s
[2025-11-26 15:01:06] 2025-11-26 20:00:14,110 | INFO     | ..............................
[2025-11-26 15:01:06] 2025-11-26 20:00:14,192 | INFO     | 
[2025-11-26 15:01:06] 2025-11-26 20:00:14,192 | INFO     | job summary report
[2025-11-26 15:01:06] 2025-11-26 20:00:14,192 | INFO     | --------------------------------------------------
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | PanDA job id: 6896298618
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | task id: 47556149
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | errors: (none)
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | pilot state: finished 
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | transexitcode: 0
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | exeerrorcode: 0
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | exeerrordiag: 
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | exitcode: 0
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | exitmsg: OK
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | cpuconsumptiontime: 208423 s
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | nevents: 1000
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | neventsw: 0
[2025-11-26 15:01:06] 2025-11-26 20:00:14,193 | INFO     | pid: 3275573
[2025-11-26 15:01:06] 2025-11-26 20:00:14,194 | INFO     | pgrp: 3275573
[2025-11-26 15:01:06] 2025-11-26 20:00:14,194 | INFO     | corecount: 8
[2025-11-26 15:01:06] 2025-11-26 20:00:14,194 | INFO     | event service: False
[2025-11-26 15:01:06] 2025-11-26 20:00:14,194 | INFO     | sizes: {0: 2284093, 1: 2284292, 10: 2284554, 12: 2284582, 73610: 2343985, 73614: 2352979, 73615: 2353163, 73622: 2353409}
[2025-11-26 15:01:06] 2025-11-26 20:00:14,194 | INFO     | --------------------------------------------------
[2025-11-26 15:01:06] 2025-11-26 20:00:14,194 | INFO     | 
[2025-11-26 15:01:06] 2025-11-26 20:00:14,194 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 15:01:06] 2025-11-26 20:00:14,214 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,215 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,216 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,216 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,216 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 15:01:06] 2025-11-26 20:00:14,216 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,216 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 15:01:06] 2025-11-26 20:00:14,216 | INFO     | job 6896298618 has completed (purged errors)
[2025-11-26 15:01:06] 2025-11-26 20:00:14,216 | INFO     | overall cleanup function is called
[2025-11-26 15:01:06] 2025-11-26 20:00:15,231 | INFO     | --- collectZombieJob: --- 10, [3275573]
[2025-11-26 15:01:06] 2025-11-26 20:00:15,232 | INFO     | zombie collector waiting for pid 3275573
[2025-11-26 15:01:06] 2025-11-26 20:00:15,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 15:01:06] 2025-11-26 20:00:15,232 | INFO     | collected zombie processes
[2025-11-26 15:01:06] 2025-11-26 20:00:15,232 | INFO     | will attempt to kill all subprocesses of pid=3275573
[2025-11-26 15:01:06] 2025-11-26 20:00:15,755 | INFO     | process IDs to be killed: [3275573] (in reverse order)
[2025-11-26 15:01:06] 2025-11-26 20:00:15,906 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 15:01:06] 2025-11-26 20:00:15,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 15:01:06] 2025-11-26 20:00:15,927 | INFO     | did not find any defunct processes belonging to 3275573
[2025-11-26 15:01:06] 2025-11-26 20:00:15,947 | INFO     | did not find any defunct processes belonging to 3275573
[2025-11-26 15:01:06] 2025-11-26 20:00:15,949 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 15:01:06] 2025-11-26 20:00:15,949 | INFO     | ready for new job
[2025-11-26 15:01:06] 2025-11-26 20:00:15,949 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 15:01:06] 2025-11-26 20:00:15,953 | INFO     | ***************************************
[2025-11-26 15:01:06] 2025-11-26 20:00:15,953 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 15:01:06] 2025-11-26 20:00:15,953 | INFO     | ***************************************
[2025-11-26 15:01:06] 2025-11-26 20:00:15,953 | INFO     | 
[2025-11-26 15:01:06] 2025-11-26 20:00:15,958 | INFO     | architecture information:
[2025-11-26 15:01:06] 2025-11-26 20:00:15,958 | INFO     | executing command: cat /etc/os-release
[2025-11-26 15:01:06] 2025-11-26 20:00:15,978 | INFO     | cat /etc/os-release:
[2025-11-26 15:01:06] NAME="CentOS Linux"
[2025-11-26 15:01:06] VERSION="7 (Core)"
[2025-11-26 15:01:06] ID="centos"
[2025-11-26 15:01:06] ID_LIKE="rhel fedora"
[2025-11-26 15:01:06] VERSION_ID="7"
[2025-11-26 15:01:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 15:01:06] ANSI_COLOR="0;31"
[2025-11-26 15:01:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 15:01:06] HOME_URL="https://www.centos.org/"
[2025-11-26 15:01:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 15:01:06] 
[2025-11-26 15:01:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 15:01:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 15:01:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 15:01:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 15:01:06] 
[2025-11-26 15:01:06] 2025-11-26 20:00:15,978 | INFO     | ***************************************
[2025-11-26 15:01:06] 2025-11-26 20:00:16,481 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 15:01:06] 2025-11-26 20:00:16,499 | INFO     | sufficient remaining disk space (121340166144 B)
[2025-11-26 15:01:06] 2025-11-26 20:00:16,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 15:01:06] 2025-11-26 20:00:16,500 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 15:01:06] 2025-11-26 20:00:16,500 | INFO     | update_server=False
[2025-11-26 15:01:06] 2025-11-26 20:00:16,500 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 15:01:06] 2025-11-26 20:00:16,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 15:01:06] 2025-11-26 20:00:16,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:01:06] 2025-11-26 20:00:16,662 | INFO     | aborting loop
[2025-11-26 15:01:06] 2025-11-26 20:00:17,191 | INFO     | all payload control threads have been joined
[2025-11-26 15:01:06] 2025-11-26 20:00:17,478 | INFO     | all job control threads have been joined
[2025-11-26 15:01:06] 2025-11-26 20:00:17,505 | INFO     | [job] retrieve thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:17,539 | INFO     | all data control threads have been joined
[2025-11-26 15:01:06] 2025-11-26 20:00:17,562 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 15:01:06] 2025-11-26 20:00:17,667 | INFO     | [job] job monitor thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:17,954 | INFO     | [payload] validate_post thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:17,968 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:18,197 | INFO     | [payload] control thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:18,445 | INFO     | [payload] failed_post thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:18,477 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:18,484 | INFO     | [job] control thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:18,509 | INFO     | [data] copytool_out thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:18,563 | INFO     | [data] control thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:18,813 | INFO     | [data] copytool_in thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:18,837 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:18,910 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:18,969 | INFO     | [job] validate thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:19,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:01:06] 2025-11-26 20:00:20,212 | INFO     | [job] queue monitor thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:21,567 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 15:01:06] 2025-11-26 20:00:46,268 | INFO     | PID=3268929 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 15:01:06] 2025-11-26 20:00:46,268 | INFO     | .. there are 32 such processes running
[2025-11-26 15:01:06] 2025-11-26 20:00:46,269 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 15:01:06] 2025-11-26 20:00:46,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 15:01:06] 2025-11-26 20:00:46,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 15:01:06] 2025-11-26 20:00:59,103 | INFO     | [monitor] cgroup control has ended
[2025-11-26 15:01:06] 2025-11-26 20:01:00,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140438580909888)>', '<ExcThread(monitor, started 140438233143040)>']
[2025-11-26 15:01:06] 2025-11-26 20:01:01,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 15:01:06] 2025-11-26 20:01:01,352 | INFO     | [monitor] control thread has ended
[2025-11-26 15:01:06] 2025-11-26 20:01:05,797 | INFO     | all workflow threads have been joined
[2025-11-26 15:01:06] 2025-11-26 20:01:05,798 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 15:01:06] 2025-11-26 20:01:05,798 | INFO     | traces error code: 0
[2025-11-26 15:01:06] 2025-11-26 20:01:05,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 15:01:06] 2025-11-26 20:01:05,925 [wrapper] ==== pilot stdout END ====
[2025-11-26 15:01:06] 2025-11-26 20:01:05,927 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 15:01:06] 2025-11-26 20:01:05,930 [wrapper] pilotpid: 3268929
[2025-11-26 15:01:06] 2025-11-26 20:01:05,933 [wrapper] Pilot exit status: 0
[2025-11-26 15:01:06] 2025-11-26 20:01:05,945 [wrapper] pandaids: 6896298618
[2025-11-26 15:01:06] 2025-11-26 20:01:06,047 [wrapper] cleanup supervisor_pilot 3790601 3268930
[2025-11-26 15:01:06] 2025-11-26 20:01:06,050 [wrapper] Test setup, not cleaning
[2025-11-26 15:01:06] 2025-11-26 20:01:06,053 [wrapper] apfmon messages muted
[2025-11-26 15:01:06] 2025-11-26 20:01:06,055 [wrapper] ==== wrapper stdout END ====
[2025-11-26 15:01:06] 2025-11-26 20:01:06,057 [wrapper] ==== wrapper stderr END ====
[2025-11-26 15:01:06]  *** Error codes and diagnostics ***
[2025-11-26 15:01:06]     "exeErrorCode": 0,
[2025-11-26 15:01:06]     "exeErrorDiag": "",
[2025-11-26 15:01:06]     "pilotErrorCode": 0,
[2025-11-26 15:01:06]     "pilotErrorDiag": "",
[2025-11-26 15:01:06]  *** Listing of results directory ***
[2025-11-26 15:01:06] total 1325348
[2025-11-26 15:01:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 20:13 pilot3.tar.gz
[2025-11-26 15:01:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 21:07 queuedata.json
[2025-11-26 15:01:06] -rwx------. 1 boincer umatlas     36292 Nov 24 21:07 runpilot2-wrapper.sh
[2025-11-26 15:01:06] -rw-r--r--. 1 boincer umatlas       100 Nov 25 18:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 15:01:06] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 18:32 run_atlas
[2025-11-26 15:01:06] -rw-r--r--. 1 boincer umatlas       105 Nov 25 18:32 job.xml
[2025-11-26 15:01:06] -rw-r--r--. 2 boincer umatlas 410327525 Nov 25 18:32 EVNT.47483658._001479.pool.root.1
[2025-11-26 15:01:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 18:32 start_atlas.sh
[2025-11-26 15:01:06] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 18:32 shared
[2025-11-26 15:01:06] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 18:32 input.tar.gz
[2025-11-26 15:01:06] -rw-r--r--. 1 boincer umatlas         0 Nov 25 18:32 boinc_lockfile
[2025-11-26 15:01:06] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 18:32 pandaJob.out
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas        57 Nov 25 18:32 setup.sh.local
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas    991877 Nov 25 18:32 agis_schedconf.cvmfs.json
[2025-11-26 15:01:06] drwx------. 5 boincer umatlas      4096 Nov 25 18:32 pilot3
[2025-11-26 15:01:06] -rw-r--r--. 1 boincer umatlas       533 Nov 26 14:52 boinc_task_state.xml
[2025-11-26 15:01:06] -rw-r--r--. 1 boincer umatlas      6949 Nov 26 14:58 init_data.xml
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas 919372882 Nov 26 14:59 HITS.47556149._004659.pool.root.1
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas      1064 Nov 26 14:59 memory_monitor_summary.json
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas   1516240 Nov 26 15:00 agis_ddmendpoints.agis.ALL.json
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas   2293469 Nov 26 15:00 log.47556149._004659.job.log.tgz.1
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas      8625 Nov 26 15:00 heartbeat.json
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas        95 Nov 26 15:00 pilot_heartbeat.json
[2025-11-26 15:01:06] -rw-r--r--. 1 boincer umatlas        29 Nov 26 15:01 wrapper_checkpoint.txt
[2025-11-26 15:01:06] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 15:01 boinc_mmap_file
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas      4825 Nov 26 15:01 pilotlog.txt
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas   9473401 Nov 26 15:01 log.47556149._004659.job.log.1
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas       353 Nov 26 15:01 output.list
[2025-11-26 15:01:06] -rw-r--r--. 1 boincer umatlas       620 Nov 26 15:01 runtime_log
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas  11786240 Nov 26 15:01 result.tar.gz
[2025-11-26 15:01:06] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 15:01 runtime_log.err
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas       665 Nov 26 15:01 oKFKDm3dxh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmn3LKDmksx9Go.diag
[2025-11-26 15:01:06] -rw-r--r--. 1 boincer umatlas     21344 Nov 26 15:01 stderr.txt
[2025-11-26 15:01:06] HITS file was successfully produced:
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas 919372882 Nov 26 14:59 shared/HITS.pool.root.1
[2025-11-26 15:01:06]  *** Contents of shared directory: ***
[2025-11-26 15:01:06] total 1310656
[2025-11-26 15:01:06] -rw-r--r--. 2 boincer umatlas 410327525 Nov 25 18:32 ATLAS.root_0
[2025-11-26 15:01:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 18:32 start_atlas.sh
[2025-11-26 15:01:06] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 18:32 input.tar.gz
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas 919372882 Nov 26 14:59 HITS.pool.root.1
[2025-11-26 15:01:06] -rw-------. 1 boincer umatlas  11786240 Nov 26 15:01 result.tar.gz
15:01:08 (3263934): run_atlas exited; CPU time 209331.134621
15:01:08 (3263934): called boinc_finish(0)

</stderr_txt>
]]>

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