Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:18:53 (1301963): wrapper (7.7.26015): starting
14:18:53 (1301963): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 14:18:53] Arguments: --nthreads 12
[2025-11-25 14:18:53] Threads: 12
[2025-11-25 14:18:53] Checking for CVMFS
[2025-11-25 14:18:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 14:18:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 14:18:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 14:18:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 14:18:53] 2.11.5.0 3627452 27225 152028 153299 2 151 44835428 45568000 27610 130560 0 270395999 99.809 152846170 27424 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-25 14:18:53] CVMFS is ok
[2025-11-25 14:18:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 14:18:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 14:18:53] Further information can be found at the LHC@home message board.
[2025-11-25 14:18:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 14:18:53] Checking for apptainer binary...
[2025-11-25 14:18:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 14:18:53] Running /usr/bin/apptainer --version
[2025-11-25 14:18:53] apptainer version 1.4.1-1.el9
[2025-11-25 14:18:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 14:18:53] wns0050.triumf.lcg
[2025-11-25 14:18:53] apptainer works
[2025-11-25 14:18:53] Set ATHENA_PROC_NUMBER=12
[2025-11-25 14:18:53] Set ATHENA_CORE_NUMBER=12
[2025-11-25 14:18:53] Starting ATLAS job with PandaID=6896990072
[2025-11-25 14:18:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 14:23:08]  *** The last 200 lines of the pilot log: ***
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | could have reported an average CPU frequency of 2733 MHz (4 samples)
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | ..............................
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . Timing measurements:
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . get job = 0 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . initial setup = 2 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . payload setup = 4 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . stage-in = 0 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . payload execution = 49 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,427 | INFO     | . stage-out = 0 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,428 | INFO     | . log creation = 0 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,428 | INFO     | ..............................
[2025-11-25 14:23:08] 2025-11-25 22:22:16,428 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 14:23:08] 2025-11-25 22:22:16,428 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896990072/pilotlog.txt
[2025-11-25 14:23:08] 2025-11-25 22:22:16,438 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-25 14:23:08] - Log from pilotlog.txt -
[2025-11-25 14:23:08] 2025-11-25 22:22:16,423 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896990072/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 14:23:08] 2025-11-25 22:22:16,424 | INFO     | extracted standard info from prmon json
[2025-11-25 14:23:08] 2025-11-25 22:22:16,424 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 14:23:08] 2025-11-25 22:22:16,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 14:23:08] 2025-11-25 22:22:16,425 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 14:23:08] 2025-11-25 22:22:16,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 14:23:08] 2025-11-25 22:22:16,425 | WARNING  | wrong length of table data, x=[1764109166.0], y=[25607.0] (must be same and length>=4)
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | could have reported an average CPU frequency of 2733 MHz (4 samples)
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | ..............................
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . Timing measurements:
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . get job = 0 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . initial setup = 2 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . payload setup = 4 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . stage-in = 0 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . payload execution = 49 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,427 | INFO     | . stage-out = 0 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,428 | INFO     | . log creation = 0 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,428 | INFO     | ..............................
[2025-11-25 14:23:08] 2025-11-25 22:22:16,428 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 14:23:08] 2025-11-25 22:22:16,428 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896990072/pilotlog.txt
[2025-11-25 14:23:08] 2025-11-25 22:22:16,438 | WARNING  | 
[2025-11-25 14:23:08] [begin log extracts]
[2025-11-25 14:23:08] - Log from pilotlog.txt -
[2025-11-25 14:23:08] 2025-11-25 22:22:16,423 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896990072/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 14:23:08] 2025-11-25 22:22:16,424 | INFO     | extracted standard info from prmon json
[2025-11-25 14:23:08] 2025-11-25 22:22:16,424 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 14:23:08] 2025-11-25 22:22:16,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 14:23:08] 2025-11-25 22:22:16,425 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 14:23:08] 2025-11-25 22:22:16,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 14:23:08] 2025-11-25 22:22:16,425 | WARNING  | wrong length of table data, x=[1764109166.0], y=[25607.0] (must be same and length>=4)
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | could have reported an average CPU frequency of 2733 MHz (4 samples)
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | ..............................
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . Timing measurements:
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . get job = 0 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . initial setup = 2 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . payload setup = 4 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . stage-in = 0 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,426 | INFO     | . payload execution = 49 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,427 | INFO     | . stage-out = 0 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,428 | INFO     | . log creation = 0 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,428 | INFO     | ..............................
[2025-11-25 14:23:08] 2025-11-25 22:22:16,428 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 14:23:08] 2025-11-25 22:22:16,428 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896990072/pilotlog.txt
[2025-11-25 14:23:08] [end log extracts]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,438 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-25 14:23:08] 2025-11-25 22:22:16,439 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-25 14:23:08] 2025-11-25 22:22:16,492 | INFO     | 
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | job summary report
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | --------------------------------------------------
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | PanDA job id: 6896990072
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | task id: 47556161
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-25 14:20:07,320 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | pilot state: failed 
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | transexitcode: 65
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | exeerrorcode: 65
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | exitcode: 65
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | cpuconsumptiontime: 42 s
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | nevents: 0
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | neventsw: 0
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | pid: 1316189
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | pgrp: 1316189
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | corecount: 12
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | event service: False
[2025-11-25 14:23:08] 2025-11-25 22:22:16,493 | INFO     | sizes: {0: 2284089, 1: 2284288, 4: 2284550, 11: 2284578, 57: 2310111, 59: 2314557, 179: 2314695}
[2025-11-25 14:23:08] 2025-11-25 22:22:16,494 | INFO     | --------------------------------------------------
[2025-11-25 14:23:08] 2025-11-25 22:22:16,494 | INFO     | 
[2025-11-25 14:23:08] 2025-11-25 22:22:16,494 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-25 14:23:08] 2025-11-25 22:22:16,508 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,508 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,508 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,508 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,508 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 14:23:08] 2025-11-25 22:22:16,509 | INFO     | job 6896990072 has completed (purged errors)
[2025-11-25 14:23:08] 2025-11-25 22:22:16,510 | INFO     | overall cleanup function is called
[2025-11-25 14:23:08] 2025-11-25 22:22:17,517 | INFO     | --- collectZombieJob: --- 10, [1316189]
[2025-11-25 14:23:08] 2025-11-25 22:22:17,517 | INFO     | zombie collector waiting for pid 1316189
[2025-11-25 14:23:08] 2025-11-25 22:22:17,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 14:23:08] 2025-11-25 22:22:17,517 | INFO     | collected zombie processes
[2025-11-25 14:23:08] 2025-11-25 22:22:17,517 | INFO     | will attempt to kill all subprocesses of pid=1316189
[2025-11-25 14:23:08] 2025-11-25 22:22:17,707 | INFO     | process IDs to be killed: [1316189] (in reverse order)
[2025-11-25 14:23:08] 2025-11-25 22:22:17,782 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 14:23:08] 2025-11-25 22:22:17,782 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 14:23:08] 2025-11-25 22:22:17,790 | INFO     | did not find any defunct processes belonging to 1316189
[2025-11-25 14:23:08] 2025-11-25 22:22:17,797 | INFO     | did not find any defunct processes belonging to 1316189
[2025-11-25 14:23:08] 2025-11-25 22:22:17,798 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 14:23:08] 2025-11-25 22:22:17,798 | INFO     | ready for new job
[2025-11-25 14:23:08] 2025-11-25 22:22:17,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 14:23:08] 2025-11-25 22:22:17,800 | INFO     | ***************************************
[2025-11-25 14:23:08] 2025-11-25 22:22:17,800 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 14:23:08] 2025-11-25 22:22:17,800 | INFO     | ***************************************
[2025-11-25 14:23:08] 2025-11-25 22:22:17,800 | INFO     | 
[2025-11-25 14:23:08] 2025-11-25 22:22:17,802 | INFO     | architecture information:
[2025-11-25 14:23:08] 2025-11-25 22:22:17,802 | INFO     | executing command: cat /etc/os-release
[2025-11-25 14:23:08] 2025-11-25 22:22:17,812 | INFO     | cat /etc/os-release:
[2025-11-25 14:23:08] NAME="CentOS Linux"
[2025-11-25 14:23:08] VERSION="7 (Core)"
[2025-11-25 14:23:08] ID="centos"
[2025-11-25 14:23:08] ID_LIKE="rhel fedora"
[2025-11-25 14:23:08] VERSION_ID="7"
[2025-11-25 14:23:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 14:23:08] ANSI_COLOR="0;31"
[2025-11-25 14:23:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 14:23:08] HOME_URL="https://www.centos.org/"
[2025-11-25 14:23:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 14:23:08] 
[2025-11-25 14:23:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 14:23:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 14:23:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 14:23:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 14:23:08] 
[2025-11-25 14:23:08] 2025-11-25 22:22:17,812 | INFO     | ***************************************
[2025-11-25 14:23:08] 2025-11-25 22:22:18,316 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-25 14:23:08] 2025-11-25 22:22:18,327 | INFO     | sufficient remaining disk space (1815511826432 B)
[2025-11-25 14:23:08] 2025-11-25 22:22:18,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 14:23:08] 2025-11-25 22:22:18,328 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 14:23:08] 2025-11-25 22:22:18,328 | INFO     | update_server=False
[2025-11-25 14:23:08] 2025-11-25 22:22:18,328 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 14:23:08] 2025-11-25 22:22:18,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:23:08] 2025-11-25 22:22:18,449 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 14:23:08] 2025-11-25 22:22:18,449 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 14:23:08] 2025-11-25 22:22:18,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:23:08] 2025-11-25 22:22:18,449 | INFO     | will abort loop
[2025-11-25 14:23:08] 2025-11-25 22:22:18,556 | INFO     | all data control threads have been joined
[2025-11-25 14:23:08] 2025-11-25 22:22:19,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 14:23:08] 2025-11-25 22:22:19,323 | INFO     | all payload control threads have been joined
[2025-11-25 14:23:08] 2025-11-25 22:22:19,333 | INFO     | [job] retrieve thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:19,334 | INFO     | [job] queue monitor thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:19,454 | INFO     | [job] job monitor thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:19,537 | INFO     | [data] copytool_in thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:19,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 14:23:08] 2025-11-25 22:22:19,561 | INFO     | [data] control thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:19,974 | INFO     | all job control threads have been joined
[2025-11-25 14:23:08] 2025-11-25 22:22:20,017 | INFO     | [payload] validate_post thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:20,193 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:20,214 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:20,328 | INFO     | [payload] control thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:20,338 | INFO     | [job] validate thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:20,502 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:20,576 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:20,608 | INFO     | [payload] failed_post thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:20,979 | INFO     | [job] control thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:21,306 | INFO     | [data] copytool_out thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:23,544 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 14:23:08] 2025-11-25 22:22:48,592 | INFO     | PID=1305614 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 14:23:08] 2025-11-25 22:22:48,593 | INFO     | .. there are 33 such processes running
[2025-11-25 14:23:08] 2025-11-25 22:22:48,593 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 14:23:08] 2025-11-25 22:22:48,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 14:23:08] 2025-11-25 22:22:48,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 14:23:08] 2025-11-25 22:23:02,182 | INFO     | [monitor] cgroup control has ended
[2025-11-25 14:23:08] 2025-11-25 22:23:03,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140641682413376)>', '<ExcThread(monitor, started 140641287780096)>']
[2025-11-25 14:23:08] 2025-11-25 22:23:03,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 14:23:08] 2025-11-25 22:23:03,666 | INFO     | [monitor] control thread has ended
[2025-11-25 14:23:08] 2025-11-25 22:23:08,462 | INFO     | all workflow threads have been joined
[2025-11-25 14:23:08] 2025-11-25 22:23:08,462 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 14:23:08] 2025-11-25 22:23:08,462 | INFO     | traces error code: 0
[2025-11-25 14:23:08] 2025-11-25 22:23:08,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 14:23:08] 2025-11-25 22:23:08,585 [wrapper] ==== pilot stdout END ====
[2025-11-25 14:23:08] 2025-11-25 22:23:08,587 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 14:23:08] 2025-11-25 22:23:08,589 [wrapper] pilotpid: 1305614
[2025-11-25 14:23:08] 2025-11-25 22:23:08,591 [wrapper] Pilot exit status: 0
[2025-11-25 14:23:08] 2025-11-25 22:23:08,597 [wrapper] pandaids: 6896990072
[2025-11-25 14:23:08] 2025-11-25 22:23:08,642 [wrapper] cleanup supervisor_pilot 1305620 1305615
[2025-11-25 14:23:08] 2025-11-25 22:23:08,644 [wrapper] Test setup, not cleaning
[2025-11-25 14:23:08] 2025-11-25 22:23:08,646 [wrapper] apfmon messages muted
[2025-11-25 14:23:08] 2025-11-25 22:23:08,648 [wrapper] ==== wrapper stdout END ====
[2025-11-25 14:23:08] 2025-11-25 22:23:08,649 [wrapper] ==== wrapper stderr END ====
[2025-11-25 14:23:08]  *** Error codes and diagnostics ***
[2025-11-25 14:23:08]     "exeErrorCode": 65,
[2025-11-25 14:23:08]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-25 14:23:08]     "pilotErrorCode": 1305,
[2025-11-25 14:23:08]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-25 14:23:08]  *** Listing of results directory ***
[2025-11-25 14:23:08] total 403336
[2025-11-25 14:23:08] -rw-r--r--. 1 boinc boinc    576529 Nov 25 04:49 pilot3.tar.gz
[2025-11-25 14:23:08] -rwx------. 1 boinc boinc     36292 Nov 25 05:07 runpilot2-wrapper.sh
[2025-11-25 14:23:08] -rw-r--r--. 1 boinc boinc      5112 Nov 25 05:07 queuedata.json
[2025-11-25 14:23:08] -rw-r--r--. 1 boinc boinc       100 Nov 25 14:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 14:23:08] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 14:18 run_atlas
[2025-11-25 14:23:08] -rw-r--r--. 1 boinc boinc       105 Nov 25 14:18 job.xml
[2025-11-25 14:23:08] -rw-r--r--. 2 boinc boinc 408820512 Nov 25 14:18 EVNT.47483658._002168.pool.root.1
[2025-11-25 14:23:08] -rw-r--r--. 1 boinc boinc      6594 Nov 25 14:18 init_data.xml
[2025-11-25 14:23:08] -rw-r--r--. 2 boinc boinc     15847 Nov 25 14:18 start_atlas.sh
[2025-11-25 14:23:08] drwxrwx--x. 2 boinc boinc      4096 Nov 25 14:18 shared
[2025-11-25 14:23:08] -rw-r--r--. 2 boinc boinc    590096 Nov 25 14:18 input.tar.gz
[2025-11-25 14:23:08] -rw-r--r--. 1 boinc boinc         0 Nov 25 14:18 boinc_lockfile
[2025-11-25 14:23:08] -rw-r--r--. 1 boinc boinc      2784 Nov 25 14:18 pandaJob.out
[2025-11-25 14:23:08] -rw-------. 1 boinc boinc    991893 Nov 25 14:18 agis_schedconf.cvmfs.json
[2025-11-25 14:23:08] -rw-------. 1 boinc boinc   1516240 Nov 25 14:19 agis_ddmendpoints.agis.ALL.json
[2025-11-25 14:23:08] drwx------. 5 boinc boinc      4096 Nov 25 14:19 pilot3
[2025-11-25 14:23:08] -rw-r--r--. 1 boinc boinc       523 Nov 25 14:19 boinc_task_state.xml
[2025-11-25 14:23:08] -rw-------. 1 boinc boinc       999 Nov 25 14:20 memory_monitor_summary.json
[2025-11-25 14:23:08] -rw-------. 1 boinc boinc     48604 Nov 25 14:20 log.47556161._001512.job.log.tgz.1
[2025-11-25 14:23:08] -rw-------. 1 boinc boinc        95 Nov 25 14:22 pilot_heartbeat.json
[2025-11-25 14:23:08] -rw-------. 1 boinc boinc     10338 Nov 25 14:22 heartbeat.json
[2025-11-25 14:23:08] -rw-------. 1 boinc boinc      5009 Nov 25 14:23 pilotlog.txt
[2025-11-25 14:23:08] -rw-------. 1 boinc boinc     93123 Nov 25 14:23 log.47556161._001512.job.log.1
[2025-11-25 14:23:08] -rw-r--r--. 1 boinc boinc      8192 Nov 25 14:23 boinc_mmap_file
[2025-11-25 14:23:08] -rw-------. 1 boinc boinc       186 Nov 25 14:23 output.list
[2025-11-25 14:23:08] -rw-r--r--. 1 boinc boinc        23 Nov 25 14:23 wrapper_checkpoint.txt
[2025-11-25 14:23:08] -rw-r--r--. 1 boinc boinc       620 Nov 25 14:23 runtime_log
[2025-11-25 14:23:08] -rw-------. 1 boinc boinc    163840 Nov 25 14:23 result.tar.gz
[2025-11-25 14:23:08] -rw-r--r--. 1 boinc boinc      8636 Nov 25 14:23 runtime_log.err
[2025-11-25 14:23:08] -rw-------. 1 boinc boinc       646 Nov 25 14:23 lfVMDmsw7h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTOMKDmAdvAPo.diag
[2025-11-25 14:23:08] -rw-r--r--. 1 boinc boinc     22379 Nov 25 14:23 stderr.txt
[2025-11-25 14:23:08] No HITS result produced
[2025-11-25 14:23:08]  *** Contents of shared directory: ***
[2025-11-25 14:23:08] total 400000
[2025-11-25 14:23:08] -rw-r--r--. 2 boinc boinc 408820512 Nov 25 14:18 ATLAS.root_0
[2025-11-25 14:23:08] -rw-r--r--. 2 boinc boinc     15847 Nov 25 14:18 start_atlas.sh
[2025-11-25 14:23:08] -rw-r--r--. 2 boinc boinc    590096 Nov 25 14:18 input.tar.gz
[2025-11-25 14:23:08] -rw-------. 1 boinc boinc    163840 Nov 25 14:23 result.tar.gz
14:23:10 (1301963): run_atlas exited; CPU time 40.526386
14:23:10 (1301963): called boinc_finish(0)

</stderr_txt>
]]>

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