Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:39:10 (1057492): wrapper (7.7.26015): starting
20:39:10 (1057492): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 20:39:10] Arguments: --nthreads 9
[2025-11-25 20:39:10] Threads: 9
[2025-11-25 20:39:10] Checking for CVMFS
[2025-11-25 20:39:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:39:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:39:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:39:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:39:11] 2.13.3.0 12531 29399 436140 153304 0 137 30670861 40960001 26606 16776704 0 147367829 99.687 134184933 39555 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 20:39:11] CVMFS is ok
[2025-11-25 20:39:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:39:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:39:11] Further information can be found at the LHC@home message board.
[2025-11-25 20:39:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:39:11] Checking for apptainer binary...
[2025-11-25 20:39:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:39:11] Running /usr/bin/apptainer --version
[2025-11-25 20:39:11] apptainer version 1.4.4-1.el9
[2025-11-25 20:39:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:39:11] c7-13-33.aglt2.org
[2025-11-25 20:39:11] apptainer works
[2025-11-25 20:39:11] Set ATHENA_PROC_NUMBER=9
[2025-11-25 20:39:11] Set ATHENA_CORE_NUMBER=9
[2025-11-25 20:39:11] Starting ATLAS job with PandaID=6896297895
[2025-11-25 20:39:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:35:34]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:35:34] 2025-11-26 21:34:34,166 | INFO     | monitor loop #4879: job 0:6896297895 is in state 'finished'
[2025-11-26 16:35:34] 2025-11-26 21:34:34,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:35:34] 2025-11-26 21:34:35,188 | INFO     | time since job start (71709s) is within the limit (172800.0s)
[2025-11-26 16:35:34] 2025-11-26 21:34:35,590 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 16:35:34] 2025-11-26 21:34:35,594 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3276.2370156249995
[2025-11-26 16:35:34] 2025-11-26 21:34:35,604 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896297895/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:35:34] 2025-11-26 21:34:35,605 | INFO     | extracted standard info from prmon json
[2025-11-26 16:35:34] 2025-11-26 21:34:35,605 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:35:34] 2025-11-26 21:34:35,605 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:35:34] 2025-11-26 21:34:35,619 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:35:34] 2025-11-26 21:34:35,620 | INFO     | sum of square deviations: 503028236408.6383
[2025-11-26 16:35:34] 2025-11-26 21:34:35,645 | INFO     | sum of deviations: 3418046869602.791
[2025-11-26 16:35:34] 2025-11-26 21:34:35,646 | INFO     | mean x: 1764157008.0340426
[2025-11-26 16:35:34] 2025-11-26 21:34:35,646 | INFO     | mean y: 3108649.005106383
[2025-11-26 16:35:34] 2025-11-26 21:34:35,646 | INFO     | intersect: -11984233019.624601
[2025-11-26 16:35:34] 2025-11-26 21:34:35,647 | INFO     | chi2: 4.93372018529014
[2025-11-26 16:35:34] 2025-11-26 21:34:35,648 | INFO     | sum of square deviations: 496634263830.7689
[2025-11-26 16:35:34] 2025-11-26 21:34:35,672 | INFO     | sum of deviations: 3721231639801.9233
[2025-11-26 16:35:34] 2025-11-26 21:34:35,672 | INFO     | mean x: 1764156855.5384614
[2025-11-26 16:35:34] 2025-11-26 21:34:35,672 | INFO     | mean y: 3115873.5683760685
[2025-11-26 16:35:34] 2025-11-26 21:34:35,673 | INFO     | intersect: -13215537744.419207
[2025-11-26 16:35:34] 2025-11-26 21:34:35,673 | INFO     | chi2: 3.041272374366995
[2025-11-26 16:35:34] 2025-11-26 21:34:35,673 | INFO     | current chi2=3.041272374366995 (change=38.357420766695846 %)
[2025-11-26 16:35:34] 2025-11-26 21:34:35,674 | INFO     | sum of square deviations: 490294354033.2626
[2025-11-26 16:35:34] 2025-11-26 21:34:35,691 | INFO     | sum of deviations: 3697859616867.721
[2025-11-26 16:35:34] 2025-11-26 21:34:35,691 | INFO     | mean x: 1764156703.0386267
[2025-11-26 16:35:34] 2025-11-26 21:34:35,691 | INFO     | mean y: 3115310.2729613734
[2025-11-26 16:35:34] 2025-11-26 21:34:35,691 | INFO     | intersect: -13302368989.777664
[2025-11-26 16:35:34] 2025-11-26 21:34:35,692 | INFO     | chi2: 3.0249274951187313
[2025-11-26 16:35:34] 2025-11-26 21:34:35,692 | INFO     | current chi2=3.0249274951187313 (change=0.5374355610508467 %)
[2025-11-26 16:35:34] 2025-11-26 21:34:35,692 | INFO     | right removable region: 1164
[2025-11-26 16:35:34] 2025-11-26 21:34:35,693 | INFO     | sum of square deviations: 496633522680.769
[2025-11-26 16:35:34] 2025-11-26 21:34:35,707 | INFO     | sum of deviations: 3000097139960.9233
[2025-11-26 16:35:34] 2025-11-26 21:34:35,707 | INFO     | mean x: 1764157160.5384614
[2025-11-26 16:35:34] 2025-11-26 21:34:35,707 | INFO     | mean y: 3118610.8905982906
[2025-11-26 16:35:34] 2025-11-26 21:34:35,707 | INFO     | intersect: -10653920453.254654
[2025-11-26 16:35:34] 2025-11-26 21:34:35,708 | INFO     | chi2: 2.076759389448107
[2025-11-26 16:35:34] 2025-11-26 21:34:35,708 | INFO     | current chi2=2.076759389448107 (change=57.90682666520177 %)
[2025-11-26 16:35:34] 2025-11-26 21:34:35,709 | INFO     | sum of square deviations: 490293585433.2624
[2025-11-26 16:35:34] 2025-11-26 21:34:35,753 | INFO     | sum of deviations: 2904957070932.782
[2025-11-26 16:35:34] 2025-11-26 21:34:35,753 | INFO     | mean x: 1764157313.0386267
[2025-11-26 16:35:34] 2025-11-26 21:34:35,753 | INFO     | mean y: 3120898.738197425
[2025-11-26 16:35:34] 2025-11-26 21:34:35,754 | INFO     | intersect: -10449394518.571728
[2025-11-26 16:35:34] 2025-11-26 21:34:35,755 | INFO     | chi2: 2.017658806449803
[2025-11-26 16:35:34] 2025-11-26 21:34:35,755 | INFO     | current chi2=2.017658806449803 (change=2.8458079110459704 %)
[2025-11-26 16:35:34] 2025-11-26 21:34:35,755 | INFO     | left removable region: 20
[2025-11-26 16:35:34] 2025-11-26 21:34:35,756 | INFO     | sum of square deviations: 464255277317.81464
[2025-11-26 16:35:34] 2025-11-26 21:34:35,786 | INFO     | sum of deviations: 3086722163591.618
[2025-11-26 16:35:34] 2025-11-26 21:34:35,786 | INFO     | mean x: 1764157282.5437062
[2025-11-26 16:35:34] 2025-11-26 21:34:35,786 | INFO     | mean y: 3129876.8076923075
[2025-11-26 16:35:34] 2025-11-26 21:34:35,786 | INFO     | intersect: -11726329431.764528
[2025-11-26 16:35:34] 2025-11-26 21:34:35,787 | INFO     | chi2: 0.09197441955629715
[2025-11-26 16:35:34] 2025-11-26 21:34:35,788 | INFO     | current memory leak: 6.65 B/s (using 1144 data points, chi2=0.09)
[2025-11-26 16:35:34] 2025-11-26 21:34:35,788 | INFO     | could have reported an average CPU frequency of 3285 MHz (43 samples)
[2025-11-26 16:35:34] 2025-11-26 21:34:35,789 | INFO     | ..............................
[2025-11-26 16:35:34] 2025-11-26 21:34:35,789 | INFO     | . Timing measurements:
[2025-11-26 16:35:34] 2025-11-26 21:34:35,789 | INFO     | . get job = 0 s
[2025-11-26 16:35:34] 2025-11-26 21:34:35,789 | INFO     | . initial setup = 2 s
[2025-11-26 16:35:34] 2025-11-26 21:34:35,789 | INFO     | . payload setup = 9 s
[2025-11-26 16:35:34] 2025-11-26 21:34:35,789 | INFO     | . stage-in = 0 s
[2025-11-26 16:35:34] 2025-11-26 21:34:35,789 | INFO     | . payload execution = 71666 s
[2025-11-26 16:35:34] 2025-11-26 21:34:35,789 | INFO     | . stage-out = 3 s
[2025-11-26 16:35:34] 2025-11-26 21:34:35,789 | INFO     | . log creation = 0 s
[2025-11-26 16:35:34] 2025-11-26 21:34:35,789 | INFO     | ..............................
[2025-11-26 16:35:34] 2025-11-26 21:34:35,871 | INFO     | 
[2025-11-26 16:35:34] 2025-11-26 21:34:35,872 | INFO     | job summary report
[2025-11-26 16:35:34] 2025-11-26 21:34:35,872 | INFO     | --------------------------------------------------
[2025-11-26 16:35:34] 2025-11-26 21:34:35,872 | INFO     | PanDA job id: 6896297895
[2025-11-26 16:35:34] 2025-11-26 21:34:35,872 | INFO     | task id: 47556149
[2025-11-26 16:35:34] 2025-11-26 21:34:35,872 | INFO     | errors: (none)
[2025-11-26 16:35:34] 2025-11-26 21:34:35,872 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:35:34] 2025-11-26 21:34:35,872 | INFO     | pilot state: finished 
[2025-11-26 16:35:34] 2025-11-26 21:34:35,872 | INFO     | transexitcode: 0
[2025-11-26 16:35:34] 2025-11-26 21:34:35,872 | INFO     | exeerrorcode: 0
[2025-11-26 16:35:34] 2025-11-26 21:34:35,872 | INFO     | exeerrordiag: 
[2025-11-26 16:35:34] 2025-11-26 21:34:35,872 | INFO     | exitcode: 0
[2025-11-26 16:35:34] 2025-11-26 21:34:35,873 | INFO     | exitmsg: OK
[2025-11-26 16:35:34] 2025-11-26 21:34:35,873 | INFO     | cpuconsumptiontime: 203721 s
[2025-11-26 16:35:34] 2025-11-26 21:34:35,873 | INFO     | nevents: 1000
[2025-11-26 16:35:34] 2025-11-26 21:34:35,873 | INFO     | neventsw: 0
[2025-11-26 16:35:34] 2025-11-26 21:34:35,873 | INFO     | pid: 1075204
[2025-11-26 16:35:34] 2025-11-26 21:34:35,873 | INFO     | pgrp: 1075204
[2025-11-26 16:35:34] 2025-11-26 21:34:35,873 | INFO     | corecount: 9
[2025-11-26 16:35:34] 2025-11-26 21:34:35,873 | INFO     | event service: False
[2025-11-26 16:35:34] 2025-11-26 21:34:35,873 | INFO     | sizes: {0: 2283486, 1: 2284342, 7: 2284604, 12: 2284632, 71679: 2344287, 71683: 2353281, 71684: 2353465, 71692: 2353711}
[2025-11-26 16:35:34] 2025-11-26 21:34:35,873 | INFO     | --------------------------------------------------
[2025-11-26 16:35:34] 2025-11-26 21:34:35,873 | INFO     | 
[2025-11-26 16:35:34] 2025-11-26 21:34:35,873 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 16:35:34] 2025-11-26 21:34:35,896 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,896 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,896 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,896 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,896 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,897 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,897 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,897 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,897 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,897 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,897 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,897 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:35:34] 2025-11-26 21:34:35,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,898 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:35:34] 2025-11-26 21:34:35,898 | INFO     | job 6896297895 has completed (purged errors)
[2025-11-26 16:35:34] 2025-11-26 21:34:35,898 | INFO     | overall cleanup function is called
[2025-11-26 16:35:34] 2025-11-26 21:34:36,918 | INFO     | --- collectZombieJob: --- 10, [1075204]
[2025-11-26 16:35:34] 2025-11-26 21:34:36,918 | INFO     | zombie collector waiting for pid 1075204
[2025-11-26 16:35:34] 2025-11-26 21:34:36,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:35:34] 2025-11-26 21:34:36,918 | INFO     | collected zombie processes
[2025-11-26 16:35:34] 2025-11-26 21:34:36,918 | INFO     | will attempt to kill all subprocesses of pid=1075204
[2025-11-26 16:35:34] 2025-11-26 21:34:37,345 | INFO     | process IDs to be killed: [1075204] (in reverse order)
[2025-11-26 16:35:34] 2025-11-26 21:34:37,524 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:35:34] 2025-11-26 21:34:37,525 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:35:34] 2025-11-26 21:34:37,545 | INFO     | did not find any defunct processes belonging to 1075204
[2025-11-26 16:35:34] 2025-11-26 21:34:37,562 | INFO     | did not find any defunct processes belonging to 1075204
[2025-11-26 16:35:34] 2025-11-26 21:34:37,567 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:35:34] 2025-11-26 21:34:37,567 | INFO     | ready for new job
[2025-11-26 16:35:34] 2025-11-26 21:34:37,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:35:34] 2025-11-26 21:34:37,575 | INFO     | ***************************************
[2025-11-26 16:35:34] 2025-11-26 21:34:37,581 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:35:34] 2025-11-26 21:34:37,581 | INFO     | ***************************************
[2025-11-26 16:35:34] 2025-11-26 21:34:37,581 | INFO     | 
[2025-11-26 16:35:34] 2025-11-26 21:34:37,584 | INFO     | architecture information:
[2025-11-26 16:35:34] 2025-11-26 21:34:37,593 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:35:34] 2025-11-26 21:34:37,611 | INFO     | cat /etc/os-release:
[2025-11-26 16:35:34] NAME="CentOS Linux"
[2025-11-26 16:35:34] VERSION="7 (Core)"
[2025-11-26 16:35:34] ID="centos"
[2025-11-26 16:35:34] ID_LIKE="rhel fedora"
[2025-11-26 16:35:34] VERSION_ID="7"
[2025-11-26 16:35:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:35:34] ANSI_COLOR="0;31"
[2025-11-26 16:35:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:35:34] HOME_URL="https://www.centos.org/"
[2025-11-26 16:35:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:35:34] 
[2025-11-26 16:35:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:35:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:35:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:35:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:35:34] 
[2025-11-26 16:35:34] 2025-11-26 21:34:37,612 | INFO     | ***************************************
[2025-11-26 16:35:34] 2025-11-26 21:34:38,116 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 16:35:34] 2025-11-26 21:34:38,153 | INFO     | sufficient remaining disk space (80126935040 B)
[2025-11-26 16:35:34] 2025-11-26 21:34:38,153 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:35:34] 2025-11-26 21:34:38,154 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:35:34] 2025-11-26 21:34:38,154 | INFO     | update_server=False
[2025-11-26 16:35:34] 2025-11-26 21:34:38,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:35:34] 2025-11-26 21:34:38,154 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:35:34] 2025-11-26 21:34:38,154 | INFO     | aborting loop
[2025-11-26 16:35:34] 2025-11-26 21:34:38,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:35:34] 2025-11-26 21:34:38,471 | INFO     | all job control threads have been joined
[2025-11-26 16:35:34] 2025-11-26 21:34:38,581 | INFO     | all payload control threads have been joined
[2025-11-26 16:35:34] 2025-11-26 21:34:38,883 | INFO     | all data control threads have been joined
[2025-11-26 16:35:34] 2025-11-26 21:34:39,159 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:39,160 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:39,207 | INFO     | [job] validate thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:39,294 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:39,476 | INFO     | [job] control thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:39,574 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:35:34] 2025-11-26 21:34:39,587 | INFO     | [payload] control thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:39,599 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:39,889 | INFO     | [data] control thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:40,154 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:40,192 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:40,460 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:40,517 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:40,540 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:40,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:35:34] 2025-11-26 21:34:41,581 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:41,890 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:34:42,387 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:35:34] 2025-11-26 21:35:08,944 | INFO     | PID=1061431 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 16:35:34] 2025-11-26 21:35:08,946 | INFO     | .. there are 40 such processes running
[2025-11-26 16:35:34] 2025-11-26 21:35:08,946 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:35:34] 2025-11-26 21:35:08,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:35:34] 2025-11-26 21:35:08,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:35:34] 2025-11-26 21:35:28,213 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:35:34] 2025-11-26 21:35:29,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140347146229568)>', '<ExcThread(monitor, started 140346369500928)>']
[2025-11-26 16:35:34] 2025-11-26 21:35:30,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:35:34] 2025-11-26 21:35:30,072 | INFO     | [monitor] control thread has ended
[2025-11-26 16:35:34] 2025-11-26 21:35:34,247 | INFO     | all workflow threads have been joined
[2025-11-26 16:35:34] 2025-11-26 21:35:34,247 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:35:34] 2025-11-26 21:35:34,247 | INFO     | traces error code: 0
[2025-11-26 16:35:34] 2025-11-26 21:35:34,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:35:34] 2025-11-26 21:35:34,387 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:35:34] 2025-11-26 21:35:34,392 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:35:34] 2025-11-26 21:35:34,394 [wrapper] pilotpid: 1061431
[2025-11-26 16:35:34] 2025-11-26 21:35:34,399 [wrapper] Pilot exit status: 0
[2025-11-26 16:35:34] 2025-11-26 21:35:34,423 [wrapper] pandaids: 6896297895
[2025-11-26 16:35:34] 2025-11-26 21:35:34,558 [wrapper] cleanup supervisor_pilot 2718617 1061432
[2025-11-26 16:35:34] 2025-11-26 21:35:34,565 [wrapper] Test setup, not cleaning
[2025-11-26 16:35:34] 2025-11-26 21:35:34,568 [wrapper] apfmon messages muted
[2025-11-26 16:35:34] 2025-11-26 21:35:34,571 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:35:34] 2025-11-26 21:35:34,575 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:35:34]  *** Error codes and diagnostics ***
[2025-11-26 16:35:34]     "exeErrorCode": 0,
[2025-11-26 16:35:34]     "exeErrorDiag": "",
[2025-11-26 16:35:34]     "pilotErrorCode": 0,
[2025-11-26 16:35:34]     "pilotErrorDiag": "",
[2025-11-26 16:35:34]  *** Listing of results directory ***
[2025-11-26 16:35:34] total 1329008
[2025-11-26 16:35:34] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 20:13 pilot3.tar.gz
[2025-11-26 16:35:34] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 20:41 queuedata.json
[2025-11-26 16:35:34] -rwx------. 1 boincer umatlas     36292 Nov 24 20:45 runpilot2-wrapper.sh
[2025-11-26 16:35:34] -rw-r--r--. 1 boincer umatlas       100 Nov 25 20:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:35:34] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 20:39 run_atlas
[2025-11-26 16:35:34] -rw-r--r--. 1 boincer umatlas       105 Nov 25 20:39 job.xml
[2025-11-26 16:35:34] -rw-r--r--. 2 boincer umatlas 409955455 Nov 25 20:39 EVNT.47483658._001473.pool.root.1
[2025-11-26 16:35:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:39 start_atlas.sh
[2025-11-26 16:35:34] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 20:39 shared
[2025-11-26 16:35:34] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 20:39 input.tar.gz
[2025-11-26 16:35:34] -rw-r--r--. 1 boincer umatlas         0 Nov 25 20:39 boinc_lockfile
[2025-11-26 16:35:34] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 20:39 pandaJob.out
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas        57 Nov 25 20:39 setup.sh.local
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas    991877 Nov 25 20:39 agis_schedconf.cvmfs.json
[2025-11-26 16:35:34] drwx------. 5 boincer umatlas      4096 Nov 25 20:39 pilot3
[2025-11-26 16:35:34] -rw-r--r--. 1 boincer umatlas       533 Nov 26 16:27 boinc_task_state.xml
[2025-11-26 16:35:34] -rw-r--r--. 1 boincer umatlas      6901 Nov 26 16:31 init_data.xml
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas 922636003 Nov 26 16:33 HITS.47556149._004599.pool.root.1
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas      1061 Nov 26 16:34 memory_monitor_summary.json
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas        95 Nov 26 16:34 pilot_heartbeat.json
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas   1516240 Nov 26 16:34 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas   2421859 Nov 26 16:34 log.47556149._004599.job.log.tgz.1
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas      8578 Nov 26 16:34 heartbeat.json
[2025-11-26 16:35:34] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 16:35 boinc_mmap_file
[2025-11-26 16:35:34] -rw-r--r--. 1 boincer umatlas        29 Nov 26 16:35 wrapper_checkpoint.txt
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas      4824 Nov 26 16:35 pilotlog.txt
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas   9770088 Nov 26 16:35 log.47556149._004599.job.log.1
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas       353 Nov 26 16:35 output.list
[2025-11-26 16:35:34] -rw-r--r--. 1 boincer umatlas       620 Nov 26 16:35 runtime_log
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas  12216320 Nov 26 16:35 result.tar.gz
[2025-11-26 16:35:34] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 16:35 runtime_log.err
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas       661 Nov 26 16:35 1GhNDmcIxh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmB3LKDmGEuDBn.diag
[2025-11-26 16:35:34] -rw-r--r--. 1 boincer umatlas     21347 Nov 26 16:35 stderr.txt
[2025-11-26 16:35:34] HITS file was successfully produced:
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas 922636003 Nov 26 16:33 shared/HITS.pool.root.1
[2025-11-26 16:35:34]  *** Contents of shared directory: ***
[2025-11-26 16:35:34] total 1313896
[2025-11-26 16:35:34] -rw-r--r--. 2 boincer umatlas 409955455 Nov 25 20:39 ATLAS.root_0
[2025-11-26 16:35:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:39 start_atlas.sh
[2025-11-26 16:35:34] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 20:39 input.tar.gz
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas 922636003 Nov 26 16:33 HITS.pool.root.1
[2025-11-26 16:35:34] -rw-------. 1 boincer umatlas  12216320 Nov 26 16:35 result.tar.gz
16:35:36 (1057492): run_atlas exited; CPU time 203842.484081
16:35:36 (1057492): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN