Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:55:00 (3432921): wrapper (7.7.26015): starting
17:55:00 (3432921): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 17:55:00] Arguments: --nthreads 9
[2025-11-25 17:55:00] Threads: 9
[2025-11-25 17:55:00] Checking for CVMFS
[2025-11-25 17:55:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:55:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:55:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:55:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:55:42] 2.13.3.0 10223 29214 251368 153300 3 1096 36104957 40958786 45325 16776704 0 378536223 99.770 228954609 51082 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 17:55:42] CVMFS is ok
[2025-11-25 17:55:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:55:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:55:42] Further information can be found at the LHC@home message board.
[2025-11-25 17:55:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:55:42] Checking for apptainer binary...
[2025-11-25 17:55:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:55:42] Running /usr/bin/apptainer --version
[2025-11-25 17:55:42] apptainer version 1.4.4-1.el9
[2025-11-25 17:55:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:55:42] c8-7-6.aglt2.org
[2025-11-25 17:55:42] apptainer works
[2025-11-25 17:55:42] Set ATHENA_PROC_NUMBER=9
[2025-11-25 17:55:42] Set ATHENA_CORE_NUMBER=9
[2025-11-25 17:55:42] Starting ATLAS job with PandaID=6893856503
[2025-11-25 17:55:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:59:12]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:59:12] 2025-11-26 05:58:06,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:59:12] 2025-11-26 05:58:07,727 | INFO     | time since job start (25307s) is within the limit (172800.0s)
[2025-11-26 00:59:12] 2025-11-26 05:58:08,828 | INFO     | monitor loop #1437: job 0:6893856503 is in state 'finished'
[2025-11-26 00:59:12] 2025-11-26 05:58:08,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:59:12] 2025-11-26 05:58:11,341 | INFO     | monitor loop #1438: job 0:6893856503 is in state 'finished'
[2025-11-26 00:59:12] 2025-11-26 05:58:11,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:59:12] 2025-11-26 05:58:13,963 | INFO     | monitor loop #1439: job 0:6893856503 is in state 'finished'
[2025-11-26 00:59:12] 2025-11-26 05:58:13,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:59:12] 2025-11-26 05:58:14,406 | INFO     | PID=3454056 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 00:59:12] 2025-11-26 05:58:14,406 | INFO     | .. there are 71 such processes running
[2025-11-26 00:59:12] 2025-11-26 05:58:15,407 | INFO     | time since job start (25315s) is within the limit (172800.0s)
[2025-11-26 00:59:12] 2025-11-26 05:58:16,486 | INFO     | monitor loop #1440: job 0:6893856503 is in state 'finished'
[2025-11-26 00:59:12] 2025-11-26 05:58:16,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:59:12] 2025-11-26 05:58:17,415 | INFO     | time since job start (25317s) is within the limit (172800.0s)
[2025-11-26 00:59:12] 2025-11-26 05:58:19,015 | INFO     | monitor loop #1441: job 0:6893856503 is in state 'finished'
[2025-11-26 00:59:12] 2025-11-26 05:58:19,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:59:12] 2025-11-26 05:58:19,120 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 00:59:12] 2025-11-26 05:58:19,147 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9927656250006
[2025-11-26 00:59:12] 2025-11-26 05:58:19,239 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6893856503/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:59:12] 2025-11-26 05:58:19,240 | INFO     | extracted standard info from prmon json
[2025-11-26 00:59:12] 2025-11-26 05:58:19,240 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:59:12] 2025-11-26 05:58:19,240 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:59:12] 2025-11-26 05:58:19,276 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:59:12] 2025-11-26 05:58:19,276 | INFO     | sum of square deviations: 21843589085.65152
[2025-11-26 00:59:12] 2025-11-26 05:58:19,302 | INFO     | sum of deviations: -168397245786.5372
[2025-11-26 00:59:12] 2025-11-26 05:58:19,303 | INFO     | mean x: 1764124033.0290556
[2025-11-26 00:59:12] 2025-11-26 05:58:19,303 | INFO     | mean y: 2862693.544794189
[2025-11-26 00:59:12] 2025-11-26 05:58:19,303 | INFO     | intersect: 13602900087.723345
[2025-11-26 00:59:12] 2025-11-26 05:58:19,303 | INFO     | chi2: 24.0494251723107
[2025-11-26 00:59:12] 2025-11-26 05:58:19,303 | INFO     | sum of square deviations: 21059927265.291687
[2025-11-26 00:59:12] 2025-11-26 05:58:19,305 | INFO     | sum of deviations: -26673653608.249798
[2025-11-26 00:59:12] 2025-11-26 05:58:19,306 | INFO     | mean x: 1764123880.5416667
[2025-11-26 00:59:12] 2025-11-26 05:58:19,306 | INFO     | mean y: 2890265.0147058824
[2025-11-26 00:59:12] 2025-11-26 05:58:19,306 | INFO     | intersect: 2237258348.002391
[2025-11-26 00:59:12] 2025-11-26 05:58:19,334 | INFO     | chi2: 20.05442064059627
[2025-11-26 00:59:12] 2025-11-26 05:58:19,334 | INFO     | current chi2=20.05442064059627 (change=16.611642494948597 %)
[2025-11-26 00:59:12] 2025-11-26 05:58:19,334 | INFO     | right removable region: 407
[2025-11-26 00:59:12] 2025-11-26 05:58:19,334 | INFO     | sum of square deviations: 21059668015.291668
[2025-11-26 00:59:12] 2025-11-26 05:58:19,337 | INFO     | sum of deviations: -324734237236.5416
[2025-11-26 00:59:12] 2025-11-26 05:58:19,337 | INFO     | mean x: 1764124185.5416667
[2025-11-26 00:59:12] 2025-11-26 05:58:19,337 | INFO     | mean y: 2893100.06127451
[2025-11-26 00:59:12] 2025-11-26 05:58:19,337 | INFO     | intersect: 27205198538.4205
[2025-11-26 00:59:12] 2025-11-26 05:58:19,337 | INFO     | chi2: 20.448024550241126
[2025-11-26 00:59:12] 2025-11-26 05:58:19,337 | INFO     | current chi2=20.448024550241126 (change=14.974996683979144 %)
[2025-11-26 00:59:12] 2025-11-26 05:58:19,337 | INFO     | left removable region: 10
[2025-11-26 00:59:12] 2025-11-26 05:58:19,337 | INFO     | sum of square deviations: 19401873384.29722
[2025-11-26 00:59:12] 2025-11-26 05:58:19,371 | INFO     | sum of deviations: -240461533798.44348
[2025-11-26 00:59:12] 2025-11-26 05:58:19,371 | INFO     | mean x: 1764124155.0654912
[2025-11-26 00:59:12] 2025-11-26 05:58:19,371 | INFO     | mean y: 2946144.4785894207
[2025-11-26 00:59:12] 2025-11-26 05:58:19,371 | INFO     | intersect: 21867020388.01313
[2025-11-26 00:59:12] 2025-11-26 05:58:19,371 | INFO     | chi2: 13.943274791726916
[2025-11-26 00:59:12] 2025-11-26 05:58:19,371 | INFO     | current memory leak: -12.39 B/s (using 397 data points, chi2=13.94)
[2025-11-26 00:59:12] 2025-11-26 05:58:19,372 | INFO     | could have reported an average CPU frequency of 3791 MHz (17 samples)
[2025-11-26 00:59:12] 2025-11-26 05:58:19,372 | INFO     | ..............................
[2025-11-26 00:59:12] 2025-11-26 05:58:19,372 | INFO     | . Timing measurements:
[2025-11-26 00:59:12] 2025-11-26 05:58:19,372 | INFO     | . get job = 0 s
[2025-11-26 00:59:12] 2025-11-26 05:58:19,372 | INFO     | . initial setup = 3 s
[2025-11-26 00:59:12] 2025-11-26 05:58:19,372 | INFO     | . payload setup = 27 s
[2025-11-26 00:59:12] 2025-11-26 05:58:19,372 | INFO     | . stage-in = 0 s
[2025-11-26 00:59:12] 2025-11-26 05:58:19,372 | INFO     | . payload execution = 25158 s
[2025-11-26 00:59:12] 2025-11-26 05:58:19,372 | INFO     | . stage-out = 13 s
[2025-11-26 00:59:12] 2025-11-26 05:58:19,372 | INFO     | . log creation = 4 s
[2025-11-26 00:59:12] 2025-11-26 05:58:19,372 | INFO     | ..............................
[2025-11-26 00:59:12] 2025-11-26 05:58:19,437 | INFO     | time since job start (25319s) is within the limit (172800.0s)
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | 
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | job summary report
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | --------------------------------------------------
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | PanDA job id: 6893856503
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | task id: 47523449
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | errors: (none)
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | pilot state: finished 
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | transexitcode: 0
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | exeerrorcode: 0
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | exeerrordiag: 
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | exitcode: 0
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | exitmsg: OK
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | cpuconsumptiontime: 138880 s
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | nevents: 1000
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | neventsw: 0
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | pid: 3468213
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | pgrp: 3468213
[2025-11-26 00:59:12] 2025-11-26 05:58:19,462 | INFO     | corecount: 9
[2025-11-26 00:59:12] 2025-11-26 05:58:19,463 | INFO     | event service: False
[2025-11-26 00:59:12] 2025-11-26 05:58:19,463 | INFO     | sizes: {0: 2284315, 11: 2284315, 15: 2284605, 22: 2284633, 25192: 2319330, 25207: 2328324, 25208: 2328508, 25279: 2328818}
[2025-11-26 00:59:12] 2025-11-26 05:58:19,463 | INFO     | --------------------------------------------------
[2025-11-26 00:59:12] 2025-11-26 05:58:19,463 | INFO     | 
[2025-11-26 00:59:12] 2025-11-26 05:58:19,463 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 00:59:12] 2025-11-26 05:58:19,571 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,571 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,571 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | job 6893856503 has completed (purged errors)
[2025-11-26 00:59:12] 2025-11-26 05:58:19,572 | INFO     | overall cleanup function is called
[2025-11-26 00:59:12] 2025-11-26 05:58:20,602 | INFO     | --- collectZombieJob: --- 10, [3468213]
[2025-11-26 00:59:12] 2025-11-26 05:58:20,602 | INFO     | zombie collector waiting for pid 3468213
[2025-11-26 00:59:12] 2025-11-26 05:58:20,602 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:59:12] 2025-11-26 05:58:20,602 | INFO     | collected zombie processes
[2025-11-26 00:59:12] 2025-11-26 05:58:20,602 | INFO     | will attempt to kill all subprocesses of pid=3468213
[2025-11-26 00:59:12] 2025-11-26 05:58:22,040 | INFO     | process IDs to be killed: [3468213] (in reverse order)
[2025-11-26 00:59:12] 2025-11-26 05:58:22,380 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:59:12] 2025-11-26 05:58:22,380 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:59:12] 2025-11-26 05:58:22,450 | INFO     | did not find any defunct processes belonging to 3468213
[2025-11-26 00:59:12] 2025-11-26 05:58:22,520 | INFO     | did not find any defunct processes belonging to 3468213
[2025-11-26 00:59:12] 2025-11-26 05:58:22,523 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:59:12] 2025-11-26 05:58:22,524 | INFO     | ready for new job
[2025-11-26 00:59:12] 2025-11-26 05:58:22,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:59:12] 2025-11-26 05:58:22,531 | INFO     | ***************************************
[2025-11-26 00:59:12] 2025-11-26 05:58:22,532 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:59:12] 2025-11-26 05:58:22,532 | INFO     | ***************************************
[2025-11-26 00:59:12] 2025-11-26 05:58:22,532 | INFO     | 
[2025-11-26 00:59:12] 2025-11-26 05:58:22,564 | INFO     | architecture information:
[2025-11-26 00:59:12] 2025-11-26 05:58:22,564 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:59:12] 2025-11-26 05:58:22,667 | INFO     | cat /etc/os-release:
[2025-11-26 00:59:12] NAME="CentOS Linux"
[2025-11-26 00:59:12] VERSION="7 (Core)"
[2025-11-26 00:59:12] ID="centos"
[2025-11-26 00:59:12] ID_LIKE="rhel fedora"
[2025-11-26 00:59:12] VERSION_ID="7"
[2025-11-26 00:59:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:59:12] ANSI_COLOR="0;31"
[2025-11-26 00:59:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:59:12] HOME_URL="https://www.centos.org/"
[2025-11-26 00:59:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:59:12] 
[2025-11-26 00:59:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:59:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:59:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:59:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:59:12] 
[2025-11-26 00:59:12] 2025-11-26 05:58:22,667 | INFO     | ***************************************
[2025-11-26 00:59:12] 2025-11-26 05:58:23,171 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 00:59:12] 2025-11-26 05:58:23,296 | INFO     | sufficient remaining disk space (158118969344 B)
[2025-11-26 00:59:12] 2025-11-26 05:58:23,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:59:12] 2025-11-26 05:58:23,297 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:59:12] 2025-11-26 05:58:23,297 | INFO     | update_server=False
[2025-11-26 00:59:12] 2025-11-26 05:58:23,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:59:12] 2025-11-26 05:58:23,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:59:12] 2025-11-26 05:58:23,298 | INFO     | aborting loop
[2025-11-26 00:59:12] 2025-11-26 05:58:23,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:59:12] 2025-11-26 05:58:23,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:59:12] 2025-11-26 05:58:23,842 | INFO     | all data control threads have been joined
[2025-11-26 00:59:12] 2025-11-26 05:58:24,309 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:24,310 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:24,318 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:24,386 | INFO     | all payload control threads have been joined
[2025-11-26 00:59:12] 2025-11-26 05:58:24,387 | INFO     | [job] validate thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:24,387 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:24,388 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:24,388 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:24,482 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:59:12] 2025-11-26 05:58:24,849 | INFO     | [data] control thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:24,857 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:24,995 | INFO     | all job control threads have been joined
[2025-11-26 00:59:12] 2025-11-26 05:58:25,312 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:25,391 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:25,393 | INFO     | [payload] control thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:25,489 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:25,510 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:26,003 | INFO     | [job] control thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:27,335 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:59:12] 2025-11-26 05:58:53,459 | INFO     | PID=3454056 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 00:59:12] 2025-11-26 05:58:53,459 | INFO     | .. there are 70 such processes running
[2025-11-26 00:59:12] 2025-11-26 05:58:53,459 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:59:12] 2025-11-26 05:58:53,459 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:59:12] 2025-11-26 05:58:53,459 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:59:12] 2025-11-26 05:59:05,249 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:59:12] 2025-11-26 05:59:05,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122567903040)>', '<ExcThread(monitor, started 140121923888896)>']
[2025-11-26 00:59:12] 2025-11-26 05:59:06,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:59:12] 2025-11-26 05:59:06,541 | INFO     | [monitor] control thread has ended
[2025-11-26 00:59:12] 2025-11-26 05:59:10,726 | INFO     | all workflow threads have been joined
[2025-11-26 00:59:12] 2025-11-26 05:59:10,729 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:59:12] 2025-11-26 05:59:10,729 | INFO     | traces error code: 0
[2025-11-26 00:59:12] 2025-11-26 05:59:10,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:59:12] 2025-11-26 05:59:11,086 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:59:12] 2025-11-26 05:59:11,127 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:59:12] 2025-11-26 05:59:11,149 [wrapper] pilotpid: 3454056
[2025-11-26 00:59:12] 2025-11-26 05:59:11,206 [wrapper] Pilot exit status: 0
[2025-11-26 00:59:12] 2025-11-26 05:59:11,343 [wrapper] pandaids: 6893856503
[2025-11-26 00:59:12] 2025-11-26 05:59:11,989 [wrapper] cleanup supervisor_pilot 2854607 3454057
[2025-11-26 00:59:12] 2025-11-26 05:59:12,023 [wrapper] Test setup, not cleaning
[2025-11-26 00:59:12] 2025-11-26 05:59:12,051 [wrapper] apfmon messages muted
[2025-11-26 00:59:12] 2025-11-26 05:59:12,097 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:59:12] 2025-11-26 05:59:12,172 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:59:12]  *** Error codes and diagnostics ***
[2025-11-26 00:59:12]     "exeErrorCode": 0,
[2025-11-26 00:59:12]     "exeErrorDiag": "",
[2025-11-26 00:59:12]     "pilotErrorCode": 0,
[2025-11-26 00:59:12]     "pilotErrorDiag": "",
[2025-11-26 00:59:12]  *** Listing of results directory ***
[2025-11-26 00:59:12] total 1321576
[2025-11-26 00:59:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 07:07 pilot3.tar.gz
[2025-11-26 00:59:12] -rwx------. 1 boincer umatlas     36292 Nov 20 07:49 runpilot2-wrapper.sh
[2025-11-26 00:59:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 07:49 queuedata.json
[2025-11-26 00:59:12] -rw-r--r--. 1 boincer umatlas       100 Nov 25 17:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:59:12] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 17:55 run_atlas
[2025-11-26 00:59:12] -rw-r--r--. 1 boincer umatlas       105 Nov 25 17:55 job.xml
[2025-11-26 00:59:12] -rw-r--r--. 2 boincer umatlas 410069573 Nov 25 17:55 EVNT.47493127._000466.pool.root.1
[2025-11-26 00:59:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:55 start_atlas.sh
[2025-11-26 00:59:12] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 17:55 shared
[2025-11-26 00:59:12] -rw-r--r--. 2 boincer umatlas    590098 Nov 25 17:55 input.tar.gz
[2025-11-26 00:59:12] -rw-r--r--. 1 boincer umatlas         0 Nov 25 17:55 boinc_lockfile
[2025-11-26 00:59:12] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 17:55 pandaJob.out
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas        57 Nov 25 17:55 setup.sh.local
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas    991877 Nov 25 17:56 agis_schedconf.cvmfs.json
[2025-11-26 00:59:12] drwx------. 5 boincer umatlas      4096 Nov 25 17:56 pilot3
[2025-11-26 00:59:12] -rw-r--r--. 1 boincer umatlas       533 Nov 26 00:29 boinc_task_state.xml
[2025-11-26 00:59:12] -rw-r--r--. 1 boincer umatlas      7173 Nov 26 00:55 init_data.xml
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas 929551826 Nov 26 00:55 HITS.47523449._004657.pool.root.1
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas      1063 Nov 26 00:56 memory_monitor_summary.json
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas   1516240 Nov 26 00:57 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas   1787526 Nov 26 00:57 log.47523449._004657.job.log.tgz.1
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas      7926 Nov 26 00:58 heartbeat.json
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas        95 Nov 26 00:58 pilot_heartbeat.json
[2025-11-26 00:59:12] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 00:59 boinc_mmap_file
[2025-11-26 00:59:12] -rw-r--r--. 1 boincer umatlas        29 Nov 26 00:59 wrapper_checkpoint.txt
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas      4825 Nov 26 00:59 pilotlog.txt
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas   3090753 Nov 26 00:59 log.47523449._004657.job.log.1
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas       353 Nov 26 00:59 output.list
[2025-11-26 00:59:12] -rw-r--r--. 1 boincer umatlas       620 Nov 26 00:59 runtime_log
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas   4894720 Nov 26 00:59 result.tar.gz
[2025-11-26 00:59:12] -rw-r--r--. 1 boincer umatlas      9333 Nov 26 00:59 runtime_log.err
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas       657 Nov 26 00:59 hYDNDmcHJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBqHKDmtJXQ9n.diag
[2025-11-26 00:59:12] -rw-r--r--. 1 boincer umatlas     21876 Nov 26 00:59 stderr.txt
[2025-11-26 00:59:12] HITS file was successfully produced:
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas 929551826 Nov 26 00:55 shared/HITS.pool.root.1
[2025-11-26 00:59:12]  *** Contents of shared directory: ***
[2025-11-26 00:59:12] total 1313612
[2025-11-26 00:59:12] -rw-r--r--. 2 boincer umatlas 410069573 Nov 25 17:55 ATLAS.root_0
[2025-11-26 00:59:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:55 start_atlas.sh
[2025-11-26 00:59:12] -rw-r--r--. 2 boincer umatlas    590098 Nov 25 17:55 input.tar.gz
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas 929551826 Nov 26 00:55 HITS.pool.root.1
[2025-11-26 00:59:12] -rw-------. 1 boincer umatlas   4894720 Nov 26 00:59 result.tar.gz
00:59:13 (3432921): run_atlas exited; CPU time 139144.409259
00:59:13 (3432921): called boinc_finish(0)

</stderr_txt>
]]>

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