Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:03:16 (1871394): wrapper (7.7.26015): starting
23:03:16 (1871394): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 23:03:16] Arguments: --nthreads 3
[2025-11-25 23:03:16] Threads: 3
[2025-11-25 23:03:16] Checking for CVMFS
[2025-11-25 23:03:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:03:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:03:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:03:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:03:16] 2.9.2.0 1308651 121 65292 153298 3 88 35385726 36864001 0 130560 0 1690374 99.999 5362 4678 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 23:03:16] CVMFS is ok
[2025-11-25 23:03:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:03:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:03:16] Further information can be found at the LHC@home message board.
[2025-11-25 23:03:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:03:16] Checking for apptainer binary...
[2025-11-25 23:03:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:03:16] Running /usr/bin/apptainer --version
[2025-11-25 23:03:16] apptainer version 1.4.1-1.1
[2025-11-25 23:03:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:03:17] thA335
[2025-11-25 23:03:17] apptainer works
[2025-11-25 23:03:17] Set ATHENA_PROC_NUMBER=3
[2025-11-25 23:03:17] Set ATHENA_CORE_NUMBER=3
[2025-11-25 23:03:17] Starting ATLAS job with PandaID=6896297851
[2025-11-25 23:03:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:07:35]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:07:35] 2025-11-25 22:06:43,736 | INFO     | sufficient remaining disk space (826638598144 B)
[2025-11-25 23:07:35] 2025-11-25 22:06:43,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:07:35] 2025-11-25 22:06:43,736 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:07:35] 2025-11-25 22:06:43,736 | INFO     | update_server=False
[2025-11-25 23:07:35] 2025-11-25 22:06:43,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:07:35] 2025-11-25 22:06:43,736 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:07:35] 2025-11-25 22:06:43,736 | INFO     | aborting loop
[2025-11-25 23:07:35] 2025-11-25 22:06:43,736 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:07:35] 2025-11-25 22:06:43,797 | INFO     | all job control threads have been joined
[2025-11-25 23:07:35] 2025-11-25 22:06:43,804 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:07:35] 2025-11-25 22:06:44,614 | INFO     | all data control threads have been joined
[2025-11-25 23:07:35] 2025-11-25 22:06:44,742 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:44,743 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:44,743 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:44,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:44,803 | INFO     | [job] control thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:44,929 | INFO     | all payload control threads have been joined
[2025-11-25 23:07:35] 2025-11-25 22:06:45,030 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:45,561 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:45,620 | INFO     | [data] control thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:45,810 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:45,914 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:45,932 | INFO     | [job] validate thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:45,935 | INFO     | [payload] control thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:46,007 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:46,060 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:46,090 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:06:46,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:07:35] 2025-11-25 22:06:50,612 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:07:35] 2025-11-25 22:07:14,058 | INFO     | PID=1875133 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 23:07:35] 2025-11-25 22:07:14,058 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:07:35] 2025-11-25 22:07:14,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:07:35] 2025-11-25 22:07:14,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:07:35] 2025-11-25 22:07:29,183 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:07:35] 2025-11-25 22:07:30,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993746192192)>', '<ExcThread(monitor, started 139992974223104)>']
[2025-11-25 23:07:35] 2025-11-25 22:07:31,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:07:35] 2025-11-25 22:07:31,149 | INFO     | [monitor] control thread has ended
[2025-11-25 23:07:35] 2025-11-25 22:07:35,402 | INFO     | all workflow threads have been joined
[2025-11-25 23:07:35] 2025-11-25 22:07:35,403 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:07:35] 2025-11-25 22:07:35,403 | INFO     | traces error code: 0
[2025-11-25 23:07:35] 2025-11-25 22:07:35,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:07:35] 2025-11-25 22:07:35,450 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:07:35] 2025-11-25 22:07:35,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:07:35] 2025-11-25 22:07:35,456 [wrapper] pilotpid: 1875133
[2025-11-25 23:07:35] 2025-11-25 22:07:35,459 [wrapper] Pilot exit status: 0
[2025-11-25 23:07:35] 2025-11-25 22:07:35,466 [wrapper] pandaids: 6896297851
[2025-11-25 23:07:35] 2025-11-25 22:07:35,482 [wrapper] cleanup supervisor_pilot 1875139 1875134
[2025-11-25 23:07:35] 2025-11-25 22:07:35,484 [wrapper] Test setup, not cleaning
[2025-11-25 23:07:35] 2025-11-25 22:07:35,487 [wrapper] apfmon messages muted
[2025-11-25 23:07:35] 2025-11-25 22:07:35,489 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:07:35] 2025-11-25 22:07:35,492 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:07:35]  *** Error codes and diagnostics ***
[2025-11-25 23:07:35]     "exeErrorCode": 65,
[2025-11-25 23:07:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 23:07:35]     "pilotErrorCode": 1305,
[2025-11-25 23:07:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 23:07:35]  *** Listing of results directory ***
[2025-11-25 23:07:35] total 403516
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc    576529 Nov 25 02:13 pilot3.tar.gz
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc      5112 Nov 25 02:26 queuedata.json
[2025-11-25 23:07:35] -rwx------ 1 boinc boinc     36292 Nov 25 02:28 runpilot2-wrapper.sh
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc       100 Nov 25 23:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:07:35] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 23:03 run_atlas
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc       105 Nov 25 23:03 job.xml
[2025-11-25 23:07:35] -rw-r--r-- 2 boinc boinc 409002190 Nov 25 23:03 EVNT.47483658._001472.pool.root.1
[2025-11-25 23:07:35] -rw-r--r-- 2 boinc boinc    590102 Nov 25 23:03 input.tar.gz
[2025-11-25 23:07:35] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:03 start_atlas.sh
[2025-11-25 23:07:35] drwxrwx--x 2 boinc boinc      4096 Nov 25 23:03 shared
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc         0 Nov 25 23:03 boinc_setup_complete
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc      6196 Nov 25 23:03 init_data.xml
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc         0 Nov 25 23:03 boinc_lockfile
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc      2785 Nov 25 23:03 pandaJob.out
[2025-11-25 23:07:35] -rw------- 1 boinc boinc    991893 Nov 25 23:03 agis_schedconf.cvmfs.json
[2025-11-25 23:07:35] -rw------- 1 boinc boinc   1516240 Nov 25 23:03 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:07:35] drwx------ 5 boinc boinc      4096 Nov 25 23:03 pilot3
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc       523 Nov 25 23:04 boinc_task_state.xml
[2025-11-25 23:07:35] -rw------- 1 boinc boinc       977 Nov 25 23:04 memory_monitor_summary.json
[2025-11-25 23:07:35] -rw------- 1 boinc boinc     56276 Nov 25 23:04 log.47556149._004585.job.log.tgz.1
[2025-11-25 23:07:35] -rw------- 1 boinc boinc        95 Nov 25 23:06 pilot_heartbeat.json
[2025-11-25 23:07:35] -rw------- 1 boinc boinc      8411 Nov 25 23:06 heartbeat.json
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc      8192 Nov 25 23:07 boinc_mmap_file
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc        23 Nov 25 23:07 wrapper_checkpoint.txt
[2025-11-25 23:07:35] -rw------- 1 boinc boinc      4752 Nov 25 23:07 pilotlog.txt
[2025-11-25 23:07:35] -rw------- 1 boinc boinc     93606 Nov 25 23:07 log.47556149._004585.job.log.1
[2025-11-25 23:07:35] -rw------- 1 boinc boinc       186 Nov 25 23:07 output.list
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc       620 Nov 25 23:07 runtime_log
[2025-11-25 23:07:35] -rw------- 1 boinc boinc    174080 Nov 25 23:07 result.tar.gz
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc      8744 Nov 25 23:07 runtime_log.err
[2025-11-25 23:07:35] -rw------- 1 boinc boinc       649 Nov 25 23:07 NyhKDmW2wh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmu2LKDmzEkNzn.diag
[2025-11-25 23:07:35] -rw-r--r-- 1 boinc boinc      8125 Nov 25 23:07 stderr.txt
[2025-11-25 23:07:35] No HITS result produced
[2025-11-25 23:07:35]  *** Contents of shared directory: ***
[2025-11-25 23:07:35] total 400192
[2025-11-25 23:07:35] -rw-r--r-- 2 boinc boinc 409002190 Nov 25 23:03 ATLAS.root_0
[2025-11-25 23:07:35] -rw-r--r-- 2 boinc boinc    590102 Nov 25 23:03 input.tar.gz
[2025-11-25 23:07:35] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:03 start_atlas.sh
[2025-11-25 23:07:35] -rw------- 1 boinc boinc    174080 Nov 25 23:07 result.tar.gz
23:07:37 (1871394): run_atlas exited; CPU time 31.196377
23:07:37 (1871394): called boinc_finish(0)

</stderr_txt>
]]>

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