Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:02:49 (2921062): wrapper (7.7.26015): starting
23:02:49 (2921062): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 23:02:49] Arguments: --nthreads 8
[2025-11-25 23:02:49] Threads: 8
[2025-11-25 23:02:49] Checking for CVMFS
[2025-11-25 23:02:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:02:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:02:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:02:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:02:51] 2.13.2.0 12053 35328 278344 153307 3 569 37994843 40960001 13104 16776704 0 37040069 99.731 24098532 38474 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 23:02:51] CVMFS is ok
[2025-11-25 23:02:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:02:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:02:51] Further information can be found at the LHC@home message board.
[2025-11-25 23:02:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:02:51] Checking for apptainer binary...
[2025-11-25 23:02:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:02:51] Running /usr/bin/apptainer --version
[2025-11-25 23:02:51] apptainer version 1.4.4-1.el9
[2025-11-25 23:02:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:02:51] c-210-31-4.aglt2.org
[2025-11-25 23:02:51] apptainer works
[2025-11-25 23:02:51] Set ATHENA_PROC_NUMBER=8
[2025-11-25 23:02:51] Set ATHENA_CORE_NUMBER=8
[2025-11-25 23:02:51] Starting ATLAS job with PandaID=6895618835
[2025-11-25 23:02:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 15:45:41]  *** The last 200 lines of the pilot log: ***
[2025-11-26 15:45:41] 2025-11-26 20:45:01,793 | INFO     | preparing for final server update for job 6895618835 in state='finished'
[2025-11-26 15:45:41] 2025-11-26 20:45:01,793 | INFO     | this job has now completed (state=finished)
[2025-11-26 15:45:41] 2025-11-26 20:45:01,793 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-26 15:45:41] 2025-11-26 20:45:01,793 | INFO     | log transfer has been attempted: DONE
[2025-11-26 15:45:41] 2025-11-26 20:45:01,793 | INFO     | job 6895618835 has finished - writing final server update
[2025-11-26 15:45:41] 2025-11-26 20:45:01,794 | INFO     | total number of processed events: 1000 (read)
[2025-11-26 15:45:41] 2025-11-26 20:45:01,803 | INFO     | executing command: lscpu
[2025-11-26 15:45:41] 2025-11-26 20:45:01,879 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 15:45:41] 2025-11-26 20:45:02,521 | INFO     | monitor loop #3895: job 0:6895618835 is in state 'finished'
[2025-11-26 15:45:41] 2025-11-26 20:45:02,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 15:45:41] 2025-11-26 20:45:03,616 | INFO     | time since job start (60091s) is within the limit (172800.0s)
[2025-11-26 15:45:41] 2025-11-26 20:45:05,027 | INFO     | monitor loop #3896: job 0:6895618835 is in state 'finished'
[2025-11-26 15:45:41] 2025-11-26 20:45:05,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 15:45:41] 2025-11-26 20:45:05,624 | INFO     | time since job start (60093s) is within the limit (172800.0s)
[2025-11-26 15:45:41] 2025-11-26 20:45:07,536 | INFO     | monitor loop #3897: job 0:6895618835 is in state 'finished'
[2025-11-26 15:45:41] 2025-11-26 20:45:07,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 15:45:41] 2025-11-26 20:45:07,631 | INFO     | time since job start (60095s) is within the limit (172800.0s)
[2025-11-26 15:45:41] 2025-11-26 20:45:08,644 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 15:45:41] 2025-11-26 20:45:08,650 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2680.1518035714284
[2025-11-26 15:45:41] 2025-11-26 20:45:08,661 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895618835/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 15:45:41] 2025-11-26 20:45:08,662 | INFO     | extracted standard info from prmon json
[2025-11-26 15:45:41] 2025-11-26 20:45:08,662 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 15:45:41] 2025-11-26 20:45:08,662 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 15:45:41] 2025-11-26 20:45:08,679 | INFO     | fitting pss+swap vs Time
[2025-11-26 15:45:41] 2025-11-26 20:45:08,681 | INFO     | sum of square deviations: 295436435078.08154
[2025-11-26 15:45:41] 2025-11-26 20:45:08,699 | INFO     | sum of deviations: 1697806103175.6587
[2025-11-26 15:45:41] 2025-11-26 20:45:08,700 | INFO     | mean x: 1764159872.1422765
[2025-11-26 15:45:41] 2025-11-26 20:45:08,700 | INFO     | mean y: 2897565.9024390243
[2025-11-26 15:45:41] 2025-11-26 20:45:08,700 | INFO     | intersect: -10135328604.84437
[2025-11-26 15:45:41] 2025-11-26 20:45:08,701 | INFO     | chi2: 17.82434035643129
[2025-11-26 15:45:41] 2025-11-26 20:45:08,702 | INFO     | sum of square deviations: 290956474262.99536
[2025-11-26 15:45:41] 2025-11-26 20:45:08,720 | INFO     | sum of deviations: 2015075210024.879
[2025-11-26 15:45:41] 2025-11-26 20:45:08,721 | INFO     | mean x: 1764159719.6557713
[2025-11-26 15:45:41] 2025-11-26 20:45:08,721 | INFO     | mean y: 2908367.1450459654
[2025-11-26 15:45:41] 2025-11-26 20:45:08,721 | INFO     | intersect: -12215120211.210285
[2025-11-26 15:45:41] 2025-11-26 20:45:08,722 | INFO     | chi2: 14.748838049381721
[2025-11-26 15:45:41] 2025-11-26 20:45:08,722 | INFO     | current chi2=14.748838049381721 (change=17.254508416856396 %)
[2025-11-26 15:45:41] 2025-11-26 20:45:08,722 | INFO     | right removable region: 978
[2025-11-26 15:45:41] 2025-11-26 20:45:08,723 | INFO     | sum of square deviations: 290954888262.9953
[2025-11-26 15:45:41] 2025-11-26 20:45:08,741 | INFO     | sum of deviations: 1330281980884.372
[2025-11-26 15:45:41] 2025-11-26 20:45:08,741 | INFO     | mean x: 1764160024.6557713
[2025-11-26 15:45:41] 2025-11-26 20:45:08,742 | INFO     | mean y: 2910070.253319714
[2025-11-26 15:45:41] 2025-11-26 20:45:08,742 | INFO     | intersect: -8063049248.068194
[2025-11-26 15:45:41] 2025-11-26 20:45:08,743 | INFO     | chi2: 14.35525530708541
[2025-11-26 15:45:41] 2025-11-26 20:45:08,743 | INFO     | current chi2=14.35525530708541 (change=19.46262795691164 %)
[2025-11-26 15:45:41] 2025-11-26 20:45:08,743 | INFO     | left removable region: 10
[2025-11-26 15:45:41] 2025-11-26 20:45:08,744 | INFO     | sum of square deviations: 281257346816.5289
[2025-11-26 15:45:41] 2025-11-26 20:45:08,765 | INFO     | sum of deviations: 1457783323457.0122
[2025-11-26 15:45:41] 2025-11-26 20:45:08,765 | INFO     | mean x: 1764159994.1859505
[2025-11-26 15:45:41] 2025-11-26 20:45:08,765 | INFO     | mean y: 2933339.9276859504
[2025-11-26 15:45:41] 2025-11-26 20:45:08,766 | INFO     | intersect: -9140874096.725418
[2025-11-26 15:45:41] 2025-11-26 20:45:08,767 | INFO     | chi2: 8.46633669396638
[2025-11-26 15:45:41] 2025-11-26 20:45:08,767 | INFO     | current memory leak: 5.18 B/s (using 968 data points, chi2=8.47)
[2025-11-26 15:45:41] 2025-11-26 20:45:08,768 | INFO     | could have reported an average CPU frequency of 2821 MHz (36 samples)
[2025-11-26 15:45:41] 2025-11-26 20:45:08,768 | INFO     | ..............................
[2025-11-26 15:45:41] 2025-11-26 20:45:08,768 | INFO     | . Timing measurements:
[2025-11-26 15:45:41] 2025-11-26 20:45:08,769 | INFO     | . get job = 0 s
[2025-11-26 15:45:41] 2025-11-26 20:45:08,769 | INFO     | . initial setup = 5 s
[2025-11-26 15:45:41] 2025-11-26 20:45:08,769 | INFO     | . payload setup = 24 s
[2025-11-26 15:45:41] 2025-11-26 20:45:08,769 | INFO     | . stage-in = 0 s
[2025-11-26 15:45:41] 2025-11-26 20:45:08,769 | INFO     | . payload execution = 60017 s
[2025-11-26 15:45:41] 2025-11-26 20:45:08,769 | INFO     | . stage-out = 4 s
[2025-11-26 15:45:41] 2025-11-26 20:45:08,769 | INFO     | . log creation = 0 s
[2025-11-26 15:45:41] 2025-11-26 20:45:08,769 | INFO     | ..............................
[2025-11-26 15:45:41] 2025-11-26 20:45:09,264 | INFO     | 
[2025-11-26 15:45:41] 2025-11-26 20:45:09,264 | INFO     | job summary report
[2025-11-26 15:45:41] 2025-11-26 20:45:09,264 | INFO     | --------------------------------------------------
[2025-11-26 15:45:41] 2025-11-26 20:45:09,264 | INFO     | PanDA job id: 6895618835
[2025-11-26 15:45:41] 2025-11-26 20:45:09,264 | INFO     | task id: 47556149
[2025-11-26 15:45:41] 2025-11-26 20:45:09,264 | INFO     | errors: (none)
[2025-11-26 15:45:41] 2025-11-26 20:45:09,264 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 15:45:41] 2025-11-26 20:45:09,264 | INFO     | pilot state: finished 
[2025-11-26 15:45:41] 2025-11-26 20:45:09,264 | INFO     | transexitcode: 0
[2025-11-26 15:45:41] 2025-11-26 20:45:09,264 | INFO     | exeerrorcode: 0
[2025-11-26 15:45:41] 2025-11-26 20:45:09,265 | INFO     | exeerrordiag: 
[2025-11-26 15:45:41] 2025-11-26 20:45:09,265 | INFO     | exitcode: 0
[2025-11-26 15:45:41] 2025-11-26 20:45:09,265 | INFO     | exitmsg: OK
[2025-11-26 15:45:41] 2025-11-26 20:45:09,265 | INFO     | cpuconsumptiontime: 238899 s
[2025-11-26 15:45:41] 2025-11-26 20:45:09,265 | INFO     | nevents: 1000
[2025-11-26 15:45:41] 2025-11-26 20:45:09,265 | INFO     | neventsw: 0
[2025-11-26 15:45:41] 2025-11-26 20:45:09,265 | INFO     | pid: 2932815
[2025-11-26 15:45:41] 2025-11-26 20:45:09,265 | INFO     | pgrp: 2932815
[2025-11-26 15:45:41] 2025-11-26 20:45:09,265 | INFO     | corecount: 8
[2025-11-26 15:45:41] 2025-11-26 20:45:09,265 | INFO     | event service: False
[2025-11-26 15:45:41] 2025-11-26 20:45:09,265 | INFO     | sizes: {0: 2284143, 1: 2284342, 12: 2284342, 16: 2284632, 23: 2284660, 60046: 2338827, 60051: 2347821, 60052: 2347877, 60059: 2348123}
[2025-11-26 15:45:41] 2025-11-26 20:45:09,265 | INFO     | --------------------------------------------------
[2025-11-26 15:45:41] 2025-11-26 20:45:09,265 | INFO     | 
[2025-11-26 15:45:41] 2025-11-26 20:45:09,266 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 15:45:41] 2025-11-26 20:45:09,291 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,292 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,292 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,292 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,293 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 15:45:41] 2025-11-26 20:45:09,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,293 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 15:45:41] 2025-11-26 20:45:09,293 | INFO     | job 6895618835 has completed (purged errors)
[2025-11-26 15:45:41] 2025-11-26 20:45:09,293 | INFO     | overall cleanup function is called
[2025-11-26 15:45:41] 2025-11-26 20:45:10,309 | INFO     | --- collectZombieJob: --- 10, [2932815]
[2025-11-26 15:45:41] 2025-11-26 20:45:10,310 | INFO     | zombie collector waiting for pid 2932815
[2025-11-26 15:45:41] 2025-11-26 20:45:10,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 15:45:41] 2025-11-26 20:45:10,311 | INFO     | collected zombie processes
[2025-11-26 15:45:41] 2025-11-26 20:45:10,311 | INFO     | will attempt to kill all subprocesses of pid=2932815
[2025-11-26 15:45:41] 2025-11-26 20:45:10,627 | INFO     | process IDs to be killed: [2932815] (in reverse order)
[2025-11-26 15:45:41] 2025-11-26 20:45:10,699 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 15:45:41] 2025-11-26 20:45:10,699 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 15:45:41] 2025-11-26 20:45:10,709 | INFO     | did not find any defunct processes belonging to 2932815
[2025-11-26 15:45:41] 2025-11-26 20:45:10,719 | INFO     | did not find any defunct processes belonging to 2932815
[2025-11-26 15:45:41] 2025-11-26 20:45:10,721 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 15:45:41] 2025-11-26 20:45:10,721 | INFO     | ready for new job
[2025-11-26 15:45:41] 2025-11-26 20:45:10,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 15:45:41] 2025-11-26 20:45:10,726 | INFO     | ***************************************
[2025-11-26 15:45:41] 2025-11-26 20:45:10,726 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 15:45:41] 2025-11-26 20:45:10,726 | INFO     | ***************************************
[2025-11-26 15:45:41] 2025-11-26 20:45:10,726 | INFO     | 
[2025-11-26 15:45:41] 2025-11-26 20:45:10,730 | INFO     | architecture information:
[2025-11-26 15:45:41] 2025-11-26 20:45:10,731 | INFO     | executing command: cat /etc/os-release
[2025-11-26 15:45:41] 2025-11-26 20:45:10,750 | INFO     | cat /etc/os-release:
[2025-11-26 15:45:41] NAME="CentOS Linux"
[2025-11-26 15:45:41] VERSION="7 (Core)"
[2025-11-26 15:45:41] ID="centos"
[2025-11-26 15:45:41] ID_LIKE="rhel fedora"
[2025-11-26 15:45:41] VERSION_ID="7"
[2025-11-26 15:45:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 15:45:41] ANSI_COLOR="0;31"
[2025-11-26 15:45:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 15:45:41] HOME_URL="https://www.centos.org/"
[2025-11-26 15:45:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 15:45:41] 
[2025-11-26 15:45:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 15:45:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 15:45:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 15:45:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 15:45:41] 
[2025-11-26 15:45:41] 2025-11-26 20:45:10,751 | INFO     | ***************************************
[2025-11-26 15:45:41] 2025-11-26 20:45:11,255 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 15:45:41] 2025-11-26 20:45:11,278 | INFO     | sufficient remaining disk space (67905781760 B)
[2025-11-26 15:45:41] 2025-11-26 20:45:11,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 15:45:41] 2025-11-26 20:45:11,279 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 15:45:41] 2025-11-26 20:45:11,279 | INFO     | update_server=False
[2025-11-26 15:45:41] 2025-11-26 20:45:11,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 15:45:41] 2025-11-26 20:45:11,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:45:41] 2025-11-26 20:45:11,279 | INFO     | aborting loop
[2025-11-26 15:45:41] 2025-11-26 20:45:11,454 | INFO     | all payload control threads have been joined
[2025-11-26 15:45:41] 2025-11-26 20:45:11,766 | INFO     | all data control threads have been joined
[2025-11-26 15:45:41] 2025-11-26 20:45:12,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 15:45:41] 2025-11-26 20:45:12,285 | INFO     | [job] retrieve thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:12,285 | INFO     | [job] job monitor thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:12,316 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 15:45:41] 2025-11-26 20:45:12,459 | INFO     | [payload] control thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:12,537 | INFO     | [payload] failed_post thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:12,710 | INFO     | [job] validate thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:12,772 | INFO     | [data] control thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:12,880 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:12,897 | INFO     | all job control threads have been joined
[2025-11-26 15:45:41] 2025-11-26 20:45:12,970 | INFO     | [payload] validate_post thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:13,000 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:13,055 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:13,344 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:13,543 | INFO     | [data] copytool_in thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:13,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:45:41] 2025-11-26 20:45:13,903 | INFO     | [job] control thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:14,047 | INFO     | [data] copytool_out thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:14,876 | INFO     | [job] queue monitor thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:15,882 | INFO     | [monitor] cgroup control has ended
[2025-11-26 15:45:41] 2025-11-26 20:45:16,322 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 15:45:41] 2025-11-26 20:45:16,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280787068736)>', '<ExcThread(monitor, started 140280426632960)>']
[2025-11-26 15:45:41] 2025-11-26 20:45:21,464 | INFO     | all workflow threads have been joined
[2025-11-26 15:45:41] 2025-11-26 20:45:21,465 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 15:45:41] 2025-11-26 20:45:21,465 | INFO     | traces error code: 0
[2025-11-26 15:45:41] 2025-11-26 20:45:21,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 15:45:41] 2025-11-26 20:45:41,039 | INFO     | PID=2925843 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 15:45:41] 2025-11-26 20:45:41,040 | INFO     | .. there are 12 such processes running
[2025-11-26 15:45:41] 2025-11-26 20:45:41,040 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 15:45:41] 2025-11-26 20:45:41,040 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 15:45:41] 2025-11-26 20:45:41,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 15:45:41] 2025-11-26 20:45:41,040 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 15:45:41] 2025-11-26 20:45:41,040 | INFO     | [monitor] control thread has ended
[2025-11-26 15:45:41] 2025-11-26 20:45:41,227 [wrapper] ==== pilot stdout END ====
[2025-11-26 15:45:41] 2025-11-26 20:45:41,231 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 15:45:41] 2025-11-26 20:45:41,236 [wrapper] pilotpid: 2925843
[2025-11-26 15:45:41] 2025-11-26 20:45:41,241 [wrapper] Pilot exit status: 0
[2025-11-26 15:45:41] 2025-11-26 20:45:41,255 [wrapper] pandaids: 6895618835
[2025-11-26 15:45:41] 2025-11-26 20:45:41,323 [wrapper] cleanup supervisor_pilot  286741 2925844
[2025-11-26 15:45:41] 2025-11-26 20:45:41,328 [wrapper] Test setup, not cleaning
[2025-11-26 15:45:41] 2025-11-26 20:45:41,333 [wrapper] apfmon messages muted
[2025-11-26 15:45:41] 2025-11-26 20:45:41,338 [wrapper] ==== wrapper stdout END ====
[2025-11-26 15:45:41] 2025-11-26 20:45:41,341 [wrapper] ==== wrapper stderr END ====
[2025-11-26 15:45:41]  *** Error codes and diagnostics ***
[2025-11-26 15:45:41]     "exeErrorCode": 0,
[2025-11-26 15:45:41]     "exeErrorDiag": "",
[2025-11-26 15:45:41]     "pilotErrorCode": 0,
[2025-11-26 15:45:41]     "pilotErrorDiag": "",
[2025-11-26 15:45:41]  *** Listing of results directory ***
[2025-11-26 15:45:41] total 1303360
[2025-11-26 15:45:41] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 06:12 pilot3.tar.gz
[2025-11-26 15:45:41] -rwx------. 1 boincer umatlas     36292 Nov 24 06:51 runpilot2-wrapper.sh
[2025-11-26 15:45:41] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 06:51 queuedata.json
[2025-11-26 15:45:41] -rw-r--r--. 1 boincer umatlas       100 Nov 25 23:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 15:45:41] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 23:02 run_atlas
[2025-11-26 15:45:41] -rw-r--r--. 1 boincer umatlas       105 Nov 25 23:02 job.xml
[2025-11-26 15:45:41] -rw-r--r--. 2 boincer umatlas 407642239 Nov 25 23:02 EVNT.47483658._001332.pool.root.1
[2025-11-26 15:45:41] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 23:02 shared
[2025-11-26 15:45:41] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 23:02 input.tar.gz
[2025-11-26 15:45:41] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:02 start_atlas.sh
[2025-11-26 15:45:41] -rw-r--r--. 1 boincer umatlas         0 Nov 25 23:02 boinc_lockfile
[2025-11-26 15:45:41] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 23:02 pandaJob.out
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas        57 Nov 25 23:02 setup.sh.local
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas    991877 Nov 25 23:03 agis_schedconf.cvmfs.json
[2025-11-26 15:45:41] drwx------. 5 boincer umatlas      4096 Nov 25 23:03 pilot3
[2025-11-26 15:45:41] -rw-r--r--. 1 boincer umatlas       533 Nov 26 15:16 boinc_task_state.xml
[2025-11-26 15:45:41] -rw-r--r--. 1 boincer umatlas      6842 Nov 26 15:38 init_data.xml
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas 902809876 Nov 26 15:44 HITS.47556149._003190.pool.root.1
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas      1056 Nov 26 15:44 memory_monitor_summary.json
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas        95 Nov 26 15:44 pilot_heartbeat.json
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas   1516240 Nov 26 15:44 agis_ddmendpoints.agis.ALL.json
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas   2156901 Nov 26 15:45 log.47556149._003190.job.log.tgz.1
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas      8623 Nov 26 15:45 heartbeat.json
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas       823 Nov 26 15:45 pilotlog.txt
[2025-11-26 15:45:41] -rw-r--r--. 1 boincer umatlas        29 Nov 26 15:45 wrapper_checkpoint.txt
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas   7977032 Nov 26 15:45 log.47556149._003190.job.log.1
[2025-11-26 15:45:41] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 15:45 boinc_mmap_file
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas       353 Nov 26 15:45 output.list
[2025-11-26 15:45:41] -rw-r--r--. 1 boincer umatlas       620 Nov 26 15:45 runtime_log
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas  10158080 Nov 26 15:45 result.tar.gz
[2025-11-26 15:45:41] -rw-r--r--. 1 boincer umatlas      9353 Nov 26 15:45 runtime_log.err
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas       663 Nov 26 15:45 g5rMDmbHkh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYfLKDm5EBjOm.diag
[2025-11-26 15:45:41] -rw-r--r--. 1 boincer umatlas     21785 Nov 26 15:45 stderr.txt
[2025-11-26 15:45:41] HITS file was successfully produced:
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas 902809876 Nov 26 15:44 shared/HITS.pool.root.1
[2025-11-26 15:45:41]  *** Contents of shared directory: ***
[2025-11-26 15:45:41] total 1290264
[2025-11-26 15:45:41] -rw-r--r--. 2 boincer umatlas 407642239 Nov 25 23:02 ATLAS.root_0
[2025-11-26 15:45:41] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 23:02 input.tar.gz
[2025-11-26 15:45:41] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:02 start_atlas.sh
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas 902809876 Nov 26 15:44 HITS.pool.root.1
[2025-11-26 15:45:41] -rw-------. 1 boincer umatlas  10158080 Nov 26 15:45 result.tar.gz
15:45:43 (2921062): run_atlas exited; CPU time 239841.755087
15:45:43 (2921062): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN