Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:31:48 (3559470): wrapper (7.7.26015): starting
19:31:48 (3559470): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:31:48] Arguments: --nthreads 8
[2025-11-25 19:31:48] Threads: 8
[2025-11-25 19:31:48] Checking for CVMFS
[2025-11-25 19:31:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:31:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:31:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:31:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:31:49] 2.13.3.0 10982 29334 355320 153303 3 395 26094250 40960001 24425 16776704 0 146120687 99.696 113918724 38596 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:31:49] CVMFS is ok
[2025-11-25 19:31:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:31:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:31:49] Further information can be found at the LHC@home message board.
[2025-11-25 19:31:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:31:49] Checking for apptainer binary...
[2025-11-25 19:31:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:31:49] Running /usr/bin/apptainer --version
[2025-11-25 19:31:49] apptainer version 1.4.4-1.el9
[2025-11-25 19:31:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:31:49] c6-8-12-3.aglt2.org
[2025-11-25 19:31:49] apptainer works
[2025-11-25 19:31:49] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:31:49] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:31:49] Starting ATLAS job with PandaID=6894238283
[2025-11-25 19:31:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 01:20:59]  *** The last 200 lines of the pilot log: ***
[2025-11-26 01:20:59] 2025-11-26 06:20:12,428 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 01:20:59] 2025-11-26 06:20:14,003 | INFO     | time since job start (20877s) is within the limit (172800.0s)
[2025-11-26 01:20:59] 2025-11-26 06:20:14,933 | INFO     | monitor loop #1401: job 0:6894238283 is in state 'finished'
[2025-11-26 01:20:59] 2025-11-26 06:20:14,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 01:20:59] 2025-11-26 06:20:16,010 | INFO     | time since job start (20879s) is within the limit (172800.0s)
[2025-11-26 01:20:59] 2025-11-26 06:20:17,388 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 01:20:59] 2025-11-26 06:20:17,395 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3099.712017857143
[2025-11-26 01:20:59] 2025-11-26 06:20:17,404 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6894238283/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 01:20:59] 2025-11-26 06:20:17,404 | INFO     | extracted standard info from prmon json
[2025-11-26 01:20:59] 2025-11-26 06:20:17,405 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 01:20:59] 2025-11-26 06:20:17,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 01:20:59] 2025-11-26 06:20:17,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 01:20:59] 2025-11-26 06:20:17,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 01:20:59] 2025-11-26 06:20:17,410 | INFO     | fitting pss+swap vs Time
[2025-11-26 01:20:59] 2025-11-26 06:20:17,411 | INFO     | sum of square deviations: 12295338625.941301
[2025-11-26 01:20:59] 2025-11-26 06:20:17,413 | INFO     | sum of deviations: -33705413509.246365
[2025-11-26 01:20:59] 2025-11-26 06:20:17,413 | INFO     | mean x: 1764127592.0557184
[2025-11-26 01:20:59] 2025-11-26 06:20:17,413 | INFO     | mean y: 2611017.4340175954
[2025-11-26 01:20:59] 2025-11-26 06:20:17,413 | INFO     | intersect: 4838642930.199406
[2025-11-26 01:20:59] 2025-11-26 06:20:17,414 | INFO     | chi2: 2.9200735819693553
[2025-11-26 01:20:59] 2025-11-26 06:20:17,414 | INFO     | sum of square deviations: 11762385590.925491
[2025-11-26 01:20:59] 2025-11-26 06:20:17,416 | INFO     | sum of deviations: -10861341738.818466
[2025-11-26 01:20:59] 2025-11-26 06:20:17,416 | INFO     | mean x: 1764127439.5565476
[2025-11-26 01:20:59] 2025-11-26 06:20:17,417 | INFO     | mean y: 2617479.1220238097
[2025-11-26 01:20:59] 2025-11-26 06:20:17,417 | INFO     | intersect: 1631605990.3159394
[2025-11-26 01:20:59] 2025-11-26 06:20:17,417 | INFO     | chi2: 2.2520915220975315
[2025-11-26 01:20:59] 2025-11-26 06:20:17,417 | INFO     | current chi2=2.2520915220975315 (change=22.875521493582486 %)
[2025-11-26 01:20:59] 2025-11-26 06:20:17,417 | INFO     | right removable region: 335
[2025-11-26 01:20:59] 2025-11-26 06:20:17,417 | INFO     | sum of square deviations: 11762374000.925493
[2025-11-26 01:20:59] 2025-11-26 06:20:17,420 | INFO     | sum of deviations: -99757723127.55951
[2025-11-26 01:20:59] 2025-11-26 06:20:17,420 | INFO     | mean x: 1764127744.5565476
[2025-11-26 01:20:59] 2025-11-26 06:20:17,420 | INFO     | mean y: 2629811.345238095
[2025-11-26 01:20:59] 2025-11-26 06:20:17,420 | INFO     | intersect: 14964351576.804417
[2025-11-26 01:20:59] 2025-11-26 06:20:17,420 | INFO     | chi2: 1.0935216007195323
[2025-11-26 01:20:59] 2025-11-26 06:20:17,421 | INFO     | current chi2=1.0935216007195323 (change=62.55157378664274 %)
[2025-11-26 01:20:59] 2025-11-26 06:20:17,421 | INFO     | sum of square deviations: 11245037575.909424
[2025-11-26 01:20:59] 2025-11-26 06:20:17,423 | INFO     | sum of deviations: -101196184685.90341
[2025-11-26 01:20:59] 2025-11-26 06:20:17,423 | INFO     | mean x: 1764127897.057402
[2025-11-26 01:20:59] 2025-11-26 06:20:17,423 | INFO     | mean y: 2630235.2054380663
[2025-11-26 01:20:59] 2025-11-26 06:20:17,423 | INFO     | intersect: 15878345302.857178
[2025-11-26 01:20:59] 2025-11-26 06:20:17,424 | INFO     | chi2: 1.0847820748424621
[2025-11-26 01:20:59] 2025-11-26 06:20:17,424 | INFO     | current chi2=1.0847820748424621 (change=0.7992092585386147 %)
[2025-11-26 01:20:59] 2025-11-26 06:20:17,424 | INFO     | left removable region: 20
[2025-11-26 01:20:59] 2025-11-26 06:20:17,424 | INFO     | sum of square deviations: 9691887539.853983
[2025-11-26 01:20:59] 2025-11-26 06:20:17,426 | INFO     | sum of deviations: -55168489442.682556
[2025-11-26 01:20:59] 2025-11-26 06:20:17,426 | INFO     | mean x: 1764128019.0603175
[2025-11-26 01:20:59] 2025-11-26 06:20:17,426 | INFO     | mean y: 2629971.8253968256
[2025-11-26 01:20:59] 2025-11-26 06:20:17,426 | INFO     | intersect: 10044459037.099085
[2025-11-26 01:20:59] 2025-11-26 06:20:17,427 | INFO     | chi2: 0.34691172969443146
[2025-11-26 01:20:59] 2025-11-26 06:20:17,427 | INFO     | current memory leak: -5.69 B/s (using 315 data points, chi2=0.35)
[2025-11-26 01:20:59] 2025-11-26 06:20:17,428 | INFO     | could have reported an average CPU frequency of 3108 MHz (15 samples)
[2025-11-26 01:20:59] 2025-11-26 06:20:17,428 | INFO     | ..............................
[2025-11-26 01:20:59] 2025-11-26 06:20:17,428 | INFO     | . Timing measurements:
[2025-11-26 01:20:59] 2025-11-26 06:20:17,428 | INFO     | . get job = 0 s
[2025-11-26 01:20:59] 2025-11-26 06:20:17,428 | INFO     | . initial setup = 3 s
[2025-11-26 01:20:59] 2025-11-26 06:20:17,428 | INFO     | . payload setup = 25 s
[2025-11-26 01:20:59] 2025-11-26 06:20:17,428 | INFO     | . stage-in = 0 s
[2025-11-26 01:20:59] 2025-11-26 06:20:17,428 | INFO     | . payload execution = 20803 s
[2025-11-26 01:20:59] 2025-11-26 06:20:17,428 | INFO     | . stage-out = 2 s
[2025-11-26 01:20:59] 2025-11-26 06:20:17,428 | INFO     | . log creation = 0 s
[2025-11-26 01:20:59] 2025-11-26 06:20:17,428 | INFO     | ..............................
[2025-11-26 01:20:59] 2025-11-26 06:20:17,509 | INFO     | 
[2025-11-26 01:20:59] 2025-11-26 06:20:17,509 | INFO     | job summary report
[2025-11-26 01:20:59] 2025-11-26 06:20:17,509 | INFO     | --------------------------------------------------
[2025-11-26 01:20:59] 2025-11-26 06:20:17,509 | INFO     | PanDA job id: 6894238283
[2025-11-26 01:20:59] 2025-11-26 06:20:17,509 | INFO     | task id: 47523675
[2025-11-26 01:20:59] 2025-11-26 06:20:17,509 | INFO     | errors: (none)
[2025-11-26 01:20:59] 2025-11-26 06:20:17,509 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 01:20:59] 2025-11-26 06:20:17,509 | INFO     | pilot state: finished 
[2025-11-26 01:20:59] 2025-11-26 06:20:17,509 | INFO     | transexitcode: 0
[2025-11-26 01:20:59] 2025-11-26 06:20:17,509 | INFO     | exeerrorcode: 0
[2025-11-26 01:20:59] 2025-11-26 06:20:17,509 | INFO     | exeerrordiag: 
[2025-11-26 01:20:59] 2025-11-26 06:20:17,509 | INFO     | exitcode: 0
[2025-11-26 01:20:59] 2025-11-26 06:20:17,510 | INFO     | exitmsg: OK
[2025-11-26 01:20:59] 2025-11-26 06:20:17,510 | INFO     | cpuconsumptiontime: 120579 s
[2025-11-26 01:20:59] 2025-11-26 06:20:17,510 | INFO     | nevents: 400
[2025-11-26 01:20:59] 2025-11-26 06:20:17,510 | INFO     | neventsw: 0
[2025-11-26 01:20:59] 2025-11-26 06:20:17,510 | INFO     | pid: 3579466
[2025-11-26 01:20:59] 2025-11-26 06:20:17,510 | INFO     | pgrp: 3579466
[2025-11-26 01:20:59] 2025-11-26 06:20:17,510 | INFO     | corecount: 8
[2025-11-26 01:20:59] 2025-11-26 06:20:17,510 | INFO     | event service: False
[2025-11-26 01:20:59] 2025-11-26 06:20:17,510 | INFO     | sizes: {0: 2283951, 11: 2283951, 14: 2284241, 22: 2284269, 20832: 2318659, 20833: 2318658, 20835: 2327896, 20842: 2328034}
[2025-11-26 01:20:59] 2025-11-26 06:20:17,510 | INFO     | --------------------------------------------------
[2025-11-26 01:20:59] 2025-11-26 06:20:17,510 | INFO     | 
[2025-11-26 01:20:59] 2025-11-26 06:20:17,510 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-26 01:20:59] 2025-11-26 06:20:17,530 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,531 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,531 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,531 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,532 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,532 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 01:20:59] 2025-11-26 06:20:17,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 01:20:59] 2025-11-26 06:20:17,532 | INFO     | job 6894238283 has completed (purged errors)
[2025-11-26 01:20:59] 2025-11-26 06:20:17,532 | INFO     | overall cleanup function is called
[2025-11-26 01:20:59] 2025-11-26 06:20:18,549 | INFO     | --- collectZombieJob: --- 10, [3579466]
[2025-11-26 01:20:59] 2025-11-26 06:20:18,549 | INFO     | zombie collector waiting for pid 3579466
[2025-11-26 01:20:59] 2025-11-26 06:20:18,549 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 01:20:59] 2025-11-26 06:20:18,549 | INFO     | collected zombie processes
[2025-11-26 01:20:59] 2025-11-26 06:20:18,549 | INFO     | will attempt to kill all subprocesses of pid=3579466
[2025-11-26 01:20:59] 2025-11-26 06:20:18,948 | INFO     | process IDs to be killed: [3579466] (in reverse order)
[2025-11-26 01:20:59] 2025-11-26 06:20:19,122 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 01:20:59] 2025-11-26 06:20:19,123 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 01:20:59] 2025-11-26 06:20:19,139 | INFO     | did not find any defunct processes belonging to 3579466
[2025-11-26 01:20:59] 2025-11-26 06:20:19,154 | INFO     | did not find any defunct processes belonging to 3579466
[2025-11-26 01:20:59] 2025-11-26 06:20:19,155 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 01:20:59] 2025-11-26 06:20:19,156 | INFO     | ready for new job
[2025-11-26 01:20:59] 2025-11-26 06:20:19,156 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 01:20:59] 2025-11-26 06:20:19,158 | INFO     | ***************************************
[2025-11-26 01:20:59] 2025-11-26 06:20:19,158 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 01:20:59] 2025-11-26 06:20:19,158 | INFO     | ***************************************
[2025-11-26 01:20:59] 2025-11-26 06:20:19,158 | INFO     | 
[2025-11-26 01:20:59] 2025-11-26 06:20:19,161 | INFO     | architecture information:
[2025-11-26 01:20:59] 2025-11-26 06:20:19,162 | INFO     | executing command: cat /etc/os-release
[2025-11-26 01:20:59] 2025-11-26 06:20:19,185 | INFO     | cat /etc/os-release:
[2025-11-26 01:20:59] NAME="CentOS Linux"
[2025-11-26 01:20:59] VERSION="7 (Core)"
[2025-11-26 01:20:59] ID="centos"
[2025-11-26 01:20:59] ID_LIKE="rhel fedora"
[2025-11-26 01:20:59] VERSION_ID="7"
[2025-11-26 01:20:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 01:20:59] ANSI_COLOR="0;31"
[2025-11-26 01:20:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 01:20:59] HOME_URL="https://www.centos.org/"
[2025-11-26 01:20:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 01:20:59] 
[2025-11-26 01:20:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 01:20:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 01:20:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 01:20:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 01:20:59] 
[2025-11-26 01:20:59] 2025-11-26 06:20:19,186 | INFO     | ***************************************
[2025-11-26 01:20:59] 2025-11-26 06:20:19,689 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-26 01:20:59] 2025-11-26 06:20:19,741 | INFO     | sufficient remaining disk space (49245323264 B)
[2025-11-26 01:20:59] 2025-11-26 06:20:19,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 01:20:59] 2025-11-26 06:20:19,741 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 01:20:59] 2025-11-26 06:20:19,741 | INFO     | update_server=False
[2025-11-26 01:20:59] 2025-11-26 06:20:19,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 01:20:59] 2025-11-26 06:20:19,757 | INFO     | all job control threads have been joined
[2025-11-26 01:20:59] 2025-11-26 06:20:19,773 | INFO     | all data control threads have been joined
[2025-11-26 01:20:59] 2025-11-26 06:20:19,958 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 01:20:59] 2025-11-26 06:20:19,958 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 01:20:59] 2025-11-26 06:20:19,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:20:59] 2025-11-26 06:20:19,958 | INFO     | will abort loop
[2025-11-26 01:20:59] 2025-11-26 06:20:20,241 | INFO     | all payload control threads have been joined
[2025-11-26 01:20:59] 2025-11-26 06:20:20,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 01:20:59] 2025-11-26 06:20:20,748 | INFO     | [job] retrieve thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:20,763 | INFO     | [job] control thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:20,779 | INFO     | [data] control thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:20,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 01:20:59] 2025-11-26 06:20:20,964 | INFO     | [job] job monitor thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:21,247 | INFO     | [payload] control thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:21,307 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:21,494 | INFO     | [job] validate thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:21,535 | INFO     | [payload] validate_post thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:22,097 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:22,140 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:22,174 | INFO     | [data] copytool_in thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:22,340 | INFO     | [payload] failed_post thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:22,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:20:59] 2025-11-26 06:20:22,623 | INFO     | [data] copytool_out thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:23,553 | INFO     | [job] queue monitor thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:24,916 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:30,794 | INFO     | job.realtimelogging is not enabled
[2025-11-26 01:20:59] 2025-11-26 06:20:31,801 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 01:20:59] 2025-11-26 06:20:49,650 | INFO     | PID=3566330 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 01:20:59] 2025-11-26 06:20:49,650 | INFO     | .. there are 41 such processes running
[2025-11-26 01:20:59] 2025-11-26 06:20:49,650 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 01:20:59] 2025-11-26 06:20:49,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 01:20:59] 2025-11-26 06:20:49,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 01:20:59] 2025-11-26 06:20:53,059 | INFO     | [monitor] cgroup control has ended
[2025-11-26 01:20:59] 2025-11-26 06:20:53,901 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140296089712448)>', '<ExcThread(monitor, started 140295727453952)>']
[2025-11-26 01:20:59] 2025-11-26 06:20:54,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 01:20:59] 2025-11-26 06:20:54,680 | INFO     | [monitor] control thread has ended
[2025-11-26 01:20:59] 2025-11-26 06:20:58,927 | INFO     | all workflow threads have been joined
[2025-11-26 01:20:59] 2025-11-26 06:20:58,927 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 01:20:59] 2025-11-26 06:20:58,927 | INFO     | traces error code: 0
[2025-11-26 01:20:59] 2025-11-26 06:20:58,928 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 01:20:59] 2025-11-26 06:20:59,107 [wrapper] ==== pilot stdout END ====
[2025-11-26 01:20:59] 2025-11-26 06:20:59,115 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 01:20:59] 2025-11-26 06:20:59,120 [wrapper] pilotpid: 3566330
[2025-11-26 01:20:59] 2025-11-26 06:20:59,125 [wrapper] Pilot exit status: 0
[2025-11-26 01:20:59] 2025-11-26 06:20:59,148 [wrapper] pandaids: 6894238283
[2025-11-26 01:20:59] 2025-11-26 06:20:59,233 [wrapper] cleanup supervisor_pilot  590470 3566331
[2025-11-26 01:20:59] 2025-11-26 06:20:59,256 [wrapper] Test setup, not cleaning
[2025-11-26 01:20:59] 2025-11-26 06:20:59,291 [wrapper] apfmon messages muted
[2025-11-26 01:20:59] 2025-11-26 06:20:59,312 [wrapper] ==== wrapper stdout END ====
[2025-11-26 01:20:59] 2025-11-26 06:20:59,328 [wrapper] ==== wrapper stderr END ====
[2025-11-26 01:20:59]  *** Error codes and diagnostics ***
[2025-11-26 01:20:59]     "exeErrorCode": 0,
[2025-11-26 01:20:59]     "exeErrorDiag": "",
[2025-11-26 01:20:59]     "pilotErrorCode": 0,
[2025-11-26 01:20:59]     "pilotErrorDiag": "",
[2025-11-26 01:20:59]  *** Listing of results directory ***
[2025-11-26 01:20:59] total 622148
[2025-11-26 01:20:59] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 20:13 pilot3.tar.gz
[2025-11-26 01:20:59] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 20:18 queuedata.json
[2025-11-26 01:20:59] -rwx------. 1 boincer umatlas     36292 Nov 24 20:19 runpilot2-wrapper.sh
[2025-11-26 01:20:59] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 01:20:59] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:31 run_atlas
[2025-11-26 01:20:59] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:31 job.xml
[2025-11-26 01:20:59] -rw-r--r--. 2 boincer umatlas 282249824 Nov 25 19:31 EVNT.47523673._000003.pool.root.1
[2025-11-26 01:20:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:31 start_atlas.sh
[2025-11-26 01:20:59] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:31 shared
[2025-11-26 01:20:59] -rw-r--r--. 2 boincer umatlas    589946 Nov 25 19:31 input.tar.gz
[2025-11-26 01:20:59] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:31 boinc_lockfile
[2025-11-26 01:20:59] -rw-r--r--. 1 boincer umatlas      2614 Nov 25 19:31 pandaJob.out
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas        57 Nov 25 19:31 setup.sh.local
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas    991877 Nov 25 19:32 agis_schedconf.cvmfs.json
[2025-11-26 01:20:59] drwx------. 5 boincer umatlas      4096 Nov 25 19:32 pilot3
[2025-11-26 01:20:59] -rw-r--r--. 1 boincer umatlas      6843 Nov 26 01:11 init_data.xml
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas 344190992 Nov 26 01:18 HITS.47523675._000063.pool.root.1
[2025-11-26 01:20:59] -rw-r--r--. 1 boincer umatlas       531 Nov 26 01:18 boinc_task_state.xml
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas      1046 Nov 26 01:20 memory_monitor_summary.json
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas        95 Nov 26 01:20 pilot_heartbeat.json
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas   1516240 Nov 26 01:20 agis_ddmendpoints.agis.ALL.json
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas    557506 Nov 26 01:20 log.47523675._000063.job.log.tgz.1
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas      7823 Nov 26 01:20 heartbeat.json
[2025-11-26 01:20:59] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 01:20 boinc_mmap_file
[2025-11-26 01:20:59] -rw-r--r--. 1 boincer umatlas        29 Nov 26 01:20 wrapper_checkpoint.txt
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas      5082 Nov 26 01:20 pilotlog.txt
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas   2805755 Nov 26 01:20 log.47523675._000063.job.log.1
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas       357 Nov 26 01:20 output.list
[2025-11-26 01:20:59] -rw-r--r--. 1 boincer umatlas       620 Nov 26 01:20 runtime_log
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas   3379200 Nov 26 01:20 result.tar.gz
[2025-11-26 01:20:59] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 01:20 runtime_log.err
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas       659 Nov 26 01:20 QTUNDmJtwh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmc2LKDmy02qkn.diag
[2025-11-26 01:20:59] -rw-r--r--. 1 boincer umatlas     21481 Nov 26 01:20 stderr.txt
[2025-11-26 01:20:59] HITS file was successfully produced:
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas 344190992 Nov 26 01:18 shared/HITS.pool.root.1
[2025-11-26 01:20:59]  *** Contents of shared directory: ***
[2025-11-26 01:20:59] total 615664
[2025-11-26 01:20:59] -rw-r--r--. 2 boincer umatlas 282249824 Nov 25 19:31 ATLAS.root_0
[2025-11-26 01:20:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:31 start_atlas.sh
[2025-11-26 01:20:59] -rw-r--r--. 2 boincer umatlas    589946 Nov 25 19:31 input.tar.gz
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas 344190992 Nov 26 01:18 HITS.pool.root.1
[2025-11-26 01:20:59] -rw-------. 1 boincer umatlas   3379200 Nov 26 01:20 result.tar.gz
01:21:00 (3559470): run_atlas exited; CPU time 121391.334672
01:21:00 (3559470): called boinc_finish(0)

</stderr_txt>
]]>

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