Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
12:14:48 (915623): wrapper (7.7.26015): starting
12:14:48 (915623): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 12:14:48] Arguments: --nthreads 12
[2025-11-27 12:14:48] Threads: 12
[2025-11-27 12:14:48] Checking for CVMFS
[2025-11-27 12:14:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 12:14:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 12:14:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 12:14:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 12:14:48] 2.13.1.0 70328 2284 75904 153364 2 89 3159535 4096001 1384 130560 0 2665852 99.805 382274 615 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-11-27 12:14:48] CVMFS is ok
[2025-11-27 12:14:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 12:14:48] Checking for apptainer binary...
[2025-11-27 12:14:48] apptainer is not installed, using version from CVMFS
[2025-11-27 12:14:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 12:14:48] ryzen7
[2025-11-27 12:14:48] apptainer works
[2025-11-27 12:14:48] Set ATHENA_PROC_NUMBER=12
[2025-11-27 12:14:48] Set ATHENA_CORE_NUMBER=12
[2025-11-27 12:14:48] Starting ATLAS job with PandaID=6895334153
[2025-11-27 12:14:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:55:05]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:55:05] 2025-11-27 19:54:32,482 | INFO     | monitor loop #2007: job 0:6895334153 is in state 'finished'
[2025-11-27 19:55:05] 2025-11-27 19:54:32,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 19:55:05] 2025-11-27 19:54:32,502 | INFO     | time since job start (27579s) is within the limit (172800.0s)
[2025-11-27 19:55:05] 2025-11-27 19:54:33,961 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 19:55:05] 2025-11-27 19:54:33,963 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4292.006375
[2025-11-27 19:55:05] 2025-11-27 19:54:33,965 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6895334153/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 19:55:05] 2025-11-27 19:54:33,965 | INFO     | extracted standard info from prmon json
[2025-11-27 19:55:05] 2025-11-27 19:54:33,965 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:55:05] 2025-11-27 19:54:33,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:55:05] 2025-11-27 19:54:33,970 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:55:05] 2025-11-27 19:54:33,970 | INFO     | sum of square deviations: 28634578764.466873
[2025-11-27 19:55:05] 2025-11-27 19:54:33,973 | INFO     | sum of deviations: 422440712599.9735
[2025-11-27 19:55:05] 2025-11-27 19:54:33,973 | INFO     | mean x: 1764259465.847345
[2025-11-27 19:55:05] 2025-11-27 19:54:33,973 | INFO     | mean y: 3458225.4778761063
[2025-11-27 19:55:05] 2025-11-27 19:54:33,973 | INFO     | intersect: -26024339567.330944
[2025-11-27 19:55:05] 2025-11-27 19:54:33,974 | INFO     | chi2: 3.475677355665379
[2025-11-27 19:55:05] 2025-11-27 19:54:33,974 | INFO     | sum of square deviations: 27694970135.288643
[2025-11-27 19:55:05] 2025-11-27 19:54:33,977 | INFO     | sum of deviations: 553021880258.4968
[2025-11-27 19:55:05] 2025-11-27 19:54:33,977 | INFO     | mean x: 1764259313.362416
[2025-11-27 19:55:05] 2025-11-27 19:54:33,977 | INFO     | mean y: 3479370.577181208
[2025-11-27 19:55:05] 2025-11-27 19:54:33,977 | INFO     | intersect: -35225805874.11259
[2025-11-27 19:55:05] 2025-11-27 19:54:33,977 | INFO     | chi2: 1.6013870351116328
[2025-11-27 19:55:05] 2025-11-27 19:54:33,977 | INFO     | current chi2=1.6013870351116328 (change=53.925900731224075 %)
[2025-11-27 19:55:05] 2025-11-27 19:54:33,978 | INFO     | sum of square deviations: 26776043776.3893
[2025-11-27 19:55:05] 2025-11-27 19:54:33,981 | INFO     | sum of deviations: 548905316982.6193
[2025-11-27 19:55:05] 2025-11-27 19:54:33,981 | INFO     | mean x: 1764259160.8687782
[2025-11-27 19:55:05] 2025-11-27 19:54:33,981 | INFO     | mean y: 3478672.907239819
[2025-11-27 19:55:05] 2025-11-27 19:54:33,981 | INFO     | intersect: -36163598212.0692
[2025-11-27 19:55:05] 2025-11-27 19:54:33,981 | INFO     | chi2: 1.5575686223535807
[2025-11-27 19:55:05] 2025-11-27 19:54:33,981 | INFO     | current chi2=1.5575686223535807 (change=2.7362787257108967 %)
[2025-11-27 19:55:05] 2025-11-27 19:54:33,981 | INFO     | right removable region: 441
[2025-11-27 19:55:05] 2025-11-27 19:54:33,982 | INFO     | sum of square deviations: 27694653426.729374
[2025-11-27 19:55:05] 2025-11-27 19:54:33,985 | INFO     | sum of deviations: 313845073074.8389
[2025-11-27 19:55:05] 2025-11-27 19:54:33,985 | INFO     | mean x: 1764259618.3579419
[2025-11-27 19:55:05] 2025-11-27 19:54:33,985 | INFO     | mean y: 3475774.651006711
[2025-11-27 19:55:05] 2025-11-27 19:54:33,985 | INFO     | intersect: -19989704147.655964
[2025-11-27 19:55:05] 2025-11-27 19:54:33,985 | INFO     | chi2: 2.000515343369992
[2025-11-27 19:55:05] 2025-11-27 19:54:33,985 | INFO     | current chi2=2.000515343369992 (change=42.44243240503502 %)
[2025-11-27 19:55:05] 2025-11-27 19:54:33,985 | INFO     | sum of square deviations: 26775574079.85519
[2025-11-27 19:55:05] 2025-11-27 19:54:33,988 | INFO     | sum of deviations: 285150663301.95935
[2025-11-27 19:55:05] 2025-11-27 19:54:33,988 | INFO     | mean x: 1764259770.8642533
[2025-11-27 19:55:05] 2025-11-27 19:54:33,988 | INFO     | mean y: 3480531.649321267
[2025-11-27 19:55:05] 2025-11-27 19:54:33,989 | INFO     | intersect: -18785279791.41694
[2025-11-27 19:55:05] 2025-11-27 19:54:33,989 | INFO     | chi2: 1.9719004134500677
[2025-11-27 19:55:05] 2025-11-27 19:54:33,989 | INFO     | current chi2=1.9719004134500677 (change=1.4303779281052997 %)
[2025-11-27 19:55:05] 2025-11-27 19:54:33,989 | INFO     | left removable region: 20
[2025-11-27 19:55:05] 2025-11-27 19:54:33,989 | INFO     | sum of square deviations: 23137773459.890663
[2025-11-27 19:55:05] 2025-11-27 19:54:33,992 | INFO     | sum of deviations: 364177284281.16376
[2025-11-27 19:55:05] 2025-11-27 19:54:33,992 | INFO     | mean x: 1764259740.3871734
[2025-11-27 19:55:05] 2025-11-27 19:54:33,992 | INFO     | mean y: 3509732.919239905
[2025-11-27 19:55:05] 2025-11-27 19:54:33,992 | INFO     | intersect: -27765079242.79061
[2025-11-27 19:55:05] 2025-11-27 19:54:33,992 | INFO     | chi2: 0.02657857434361859
[2025-11-27 19:55:05] 2025-11-27 19:54:33,992 | INFO     | current memory leak: 15.74 B/s (using 421 data points, chi2=0.03)
[2025-11-27 19:55:05] 2025-11-27 19:54:33,993 | INFO     | could have reported an average CPU frequency of 4160 MHz (18 samples)
[2025-11-27 19:55:05] 2025-11-27 19:54:33,993 | INFO     | ..............................
[2025-11-27 19:55:05] 2025-11-27 19:54:33,993 | INFO     | . Timing measurements:
[2025-11-27 19:55:05] 2025-11-27 19:54:33,993 | INFO     | . get job = 0 s
[2025-11-27 19:55:05] 2025-11-27 19:54:33,993 | INFO     | . initial setup = 1 s
[2025-11-27 19:55:05] 2025-11-27 19:54:33,993 | INFO     | . payload setup = 2 s
[2025-11-27 19:55:05] 2025-11-27 19:54:33,993 | INFO     | . stage-in = 0 s
[2025-11-27 19:55:05] 2025-11-27 19:54:33,993 | INFO     | . payload execution = 27535 s
[2025-11-27 19:55:05] 2025-11-27 19:54:33,993 | INFO     | . stage-out = 1 s
[2025-11-27 19:55:05] 2025-11-27 19:54:33,993 | INFO     | . log creation = 0 s
[2025-11-27 19:55:05] 2025-11-27 19:54:33,993 | INFO     | ..............................
[2025-11-27 19:55:05] 2025-11-27 19:54:34,055 | INFO     | 
[2025-11-27 19:55:05] 2025-11-27 19:54:34,055 | INFO     | job summary report
[2025-11-27 19:55:05] 2025-11-27 19:54:34,055 | INFO     | --------------------------------------------------
[2025-11-27 19:55:05] 2025-11-27 19:54:34,055 | INFO     | PanDA job id: 6895334153
[2025-11-27 19:55:05] 2025-11-27 19:54:34,055 | INFO     | task id: 47556137
[2025-11-27 19:55:05] 2025-11-27 19:54:34,055 | INFO     | errors: (none)
[2025-11-27 19:55:05] 2025-11-27 19:54:34,055 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:55:05] 2025-11-27 19:54:34,055 | INFO     | pilot state: finished 
[2025-11-27 19:55:05] 2025-11-27 19:54:34,055 | INFO     | transexitcode: 0
[2025-11-27 19:55:05] 2025-11-27 19:54:34,055 | INFO     | exeerrorcode: 0
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | exeerrordiag: 
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | exitcode: 0
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | exitmsg: OK
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | cpuconsumptiontime: 145751 s
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | nevents: 1000
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | neventsw: 0
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | pid: 926052
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | pgrp: 926052
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | corecount: 12
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | event service: False
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | sizes: {0: 2284287, 2: 2284549, 11: 2284577, 27541: 2322339, 27544: 2331435, 27569: 2331625}
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | --------------------------------------------------
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | 
[2025-11-27 19:55:05] 2025-11-27 19:54:34,056 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-11-27 19:55:05] 2025-11-27 19:54:34,072 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,072 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,072 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,072 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,073 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:55:05] 2025-11-27 19:54:34,074 | INFO     | job 6895334153 has completed (purged errors)
[2025-11-27 19:55:05] 2025-11-27 19:54:34,074 | INFO     | overall cleanup function is called
[2025-11-27 19:55:05] 2025-11-27 19:54:35,086 | INFO     | --- collectZombieJob: --- 10, [926052]
[2025-11-27 19:55:05] 2025-11-27 19:54:35,086 | INFO     | zombie collector waiting for pid 926052
[2025-11-27 19:55:05] 2025-11-27 19:54:35,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:55:05] 2025-11-27 19:54:35,086 | INFO     | collected zombie processes
[2025-11-27 19:55:05] 2025-11-27 19:54:35,086 | INFO     | will attempt to kill all subprocesses of pid=926052
[2025-11-27 19:55:05] 2025-11-27 19:54:35,164 | INFO     | process IDs to be killed: [926052] (in reverse order)
[2025-11-27 19:55:05] 2025-11-27 19:54:35,201 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:55:05] 2025-11-27 19:54:35,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:55:05] 2025-11-27 19:54:35,204 | INFO     | did not find any defunct processes belonging to 926052
[2025-11-27 19:55:05] 2025-11-27 19:54:35,206 | INFO     | did not find any defunct processes belonging to 926052
[2025-11-27 19:55:05] 2025-11-27 19:54:35,207 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:55:05] 2025-11-27 19:54:35,207 | INFO     | ready for new job
[2025-11-27 19:55:05] 2025-11-27 19:54:35,207 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:55:05] 2025-11-27 19:54:35,209 | INFO     | ***************************************
[2025-11-27 19:55:05] 2025-11-27 19:54:35,209 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:55:05] 2025-11-27 19:54:35,209 | INFO     | ***************************************
[2025-11-27 19:55:05] 2025-11-27 19:54:35,209 | INFO     | 
[2025-11-27 19:55:05] 2025-11-27 19:54:35,226 | INFO     | architecture information:
[2025-11-27 19:55:05] 2025-11-27 19:54:35,227 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:55:05] 2025-11-27 19:54:35,237 | INFO     | cat /etc/os-release:
[2025-11-27 19:55:05] NAME="CentOS Linux"
[2025-11-27 19:55:05] VERSION="7 (Core)"
[2025-11-27 19:55:05] ID="centos"
[2025-11-27 19:55:05] ID_LIKE="rhel fedora"
[2025-11-27 19:55:05] VERSION_ID="7"
[2025-11-27 19:55:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:55:05] ANSI_COLOR="0;31"
[2025-11-27 19:55:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:55:05] HOME_URL="https://www.centos.org/"
[2025-11-27 19:55:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:55:05] 
[2025-11-27 19:55:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:55:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:55:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:55:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:55:05] 
[2025-11-27 19:55:05] 2025-11-27 19:54:35,237 | INFO     | ***************************************
[2025-11-27 19:55:05] 2025-11-27 19:54:35,742 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-11-27 19:55:05] 2025-11-27 19:54:35,751 | INFO     | sufficient remaining disk space (72858206208 B)
[2025-11-27 19:55:05] 2025-11-27 19:54:35,751 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:55:05] 2025-11-27 19:54:35,751 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:55:05] 2025-11-27 19:54:35,751 | INFO     | update_server=False
[2025-11-27 19:55:05] 2025-11-27 19:54:35,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:55:05] 2025-11-27 19:54:35,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:55:05] 2025-11-27 19:54:35,877 | INFO     | all payload control threads have been joined
[2025-11-27 19:55:05] 2025-11-27 19:54:35,982 | INFO     | all job control threads have been joined
[2025-11-27 19:55:05] 2025-11-27 19:54:35,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:55:05] 2025-11-27 19:54:35,998 | INFO     | aborting loop
[2025-11-27 19:55:05] 2025-11-27 19:54:36,494 | INFO     | all data control threads have been joined
[2025-11-27 19:55:05] 2025-11-27 19:54:36,757 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:36,757 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:36,882 | INFO     | [payload] control thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:36,986 | INFO     | [job] control thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:37,002 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:37,018 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:37,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:55:05] 2025-11-27 19:54:37,210 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:37,218 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:37,498 | INFO     | [data] control thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:38,026 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:38,038 | INFO     | [job] validate thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:38,090 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:38,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:38,150 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:38,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:55:05] 2025-11-27 19:54:39,054 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:39,094 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:55:05] 2025-11-27 19:54:42,198 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:55:05] 2025-11-27 19:54:43,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140429330736960)>', '<ExcThread(monitor, started 140428896618240)>']
[2025-11-27 19:55:05] 2025-11-27 19:54:48,554 | INFO     | all workflow threads have been joined
[2025-11-27 19:55:05] 2025-11-27 19:54:48,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:55:05] 2025-11-27 19:54:48,554 | INFO     | traces error code: 0
[2025-11-27 19:55:05] 2025-11-27 19:54:48,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:55:05] 2025-11-27 19:55:05,673 | INFO     | PID=919431 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 19:55:05] 2025-11-27 19:55:05,673 | INFO     | .. there are 3 such processes running
[2025-11-27 19:55:05] 2025-11-27 19:55:05,674 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:55:05] 2025-11-27 19:55:05,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:55:05] 2025-11-27 19:55:05,674 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:55:05] 2025-11-27 19:55:05,674 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:55:05] 2025-11-27 19:55:05,674 | INFO     | [monitor] control thread has ended
[2025-11-27 19:55:05] 2025-11-27 19:55:05,727 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:55:05] 2025-11-27 19:55:05,728 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:55:05] 2025-11-27 19:55:05,730 [wrapper] pilotpid: 919431
[2025-11-27 19:55:05] 2025-11-27 19:55:05,731 [wrapper] Pilot exit status: 0
[2025-11-27 19:55:05] 2025-11-27 19:55:05,745 [wrapper] pandaids: 6895334153
[2025-11-27 19:55:05] 2025-11-27 19:55:05,766 [wrapper] cleanup supervisor_pilot 1063634 919432
[2025-11-27 19:55:05] 2025-11-27 19:55:05,768 [wrapper] Test setup, not cleaning
[2025-11-27 19:55:05] 2025-11-27 19:55:05,769 [wrapper] apfmon messages muted
[2025-11-27 19:55:05] 2025-11-27 19:55:05,771 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:55:05] 2025-11-27 19:55:05,772 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:55:05]  *** Error codes and diagnostics ***
[2025-11-27 19:55:05]     "exeErrorCode": 0,
[2025-11-27 19:55:05]     "exeErrorDiag": "",
[2025-11-27 19:55:05]     "pilotErrorCode": 0,
[2025-11-27 19:55:05]     "pilotErrorDiag": "",
[2025-11-27 19:55:05]  *** Listing of results directory ***
[2025-11-27 19:55:05] total 1316780
[2025-11-27 19:55:05] -rw-r--r-- 1 boinc boinc    576529 Nov 22 02:56 pilot3.tar.gz
[2025-11-27 19:55:05] -rwx------ 1 boinc boinc     36292 Nov 22 03:06 runpilot2-wrapper.sh
[2025-11-27 19:55:05] -rw-r--r-- 1 boinc boinc      5112 Nov 22 03:07 queuedata.json
[2025-11-27 19:55:05] -rw-rw-r-- 1 boinc boinc       100 Nov 27 12:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:55:05] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 12:14 run_atlas
[2025-11-27 19:55:05] -rw-rw-r-- 1 boinc boinc       105 Nov 27 12:14 job.xml
[2025-11-27 19:55:05] -rw-r--r-- 2 boinc boinc     15847 Nov 27 12:14 start_atlas.sh
[2025-11-27 19:55:05] drwxrwx--x 2 boinc boinc      4096 Nov 27 12:14 shared
[2025-11-27 19:55:05] -rw-r--r-- 2 boinc boinc    590102 Nov 27 12:14 input.tar.gz
[2025-11-27 19:55:05] -rw-rw-r-- 1 boinc boinc      6936 Nov 27 12:14 init_data.xml
[2025-11-27 19:55:05] -rw-r--r-- 2 boinc boinc 409768931 Nov 27 12:14 EVNT.47483658._000229.pool.root.1
[2025-11-27 19:55:05] -rw-rw-r-- 1 boinc boinc         0 Nov 27 12:14 boinc_setup_complete
[2025-11-27 19:55:05] -rw-rw-r-- 1 boinc boinc         0 Nov 27 12:14 boinc_lockfile
[2025-11-27 19:55:05] -rw-rw-r-- 1 boinc boinc      2785 Nov 27 12:14 pandaJob.out
[2025-11-27 19:55:05] -rw------- 1 boinc boinc    991566 Nov 27 12:14 agis_schedconf.cvmfs.json
[2025-11-27 19:55:05] drwx------ 5 boinc boinc      4096 Nov 27 12:14 pilot3
[2025-11-27 19:55:05] -rw-rw-r-- 1 boinc boinc       533 Nov 27 19:48 boinc_task_state.xml
[2025-11-27 19:55:05] -rw------- 1 boinc boinc 922454837 Nov 27 19:53 HITS.47556137._002253.pool.root.1
[2025-11-27 19:55:05] -rw------- 1 boinc boinc      1033 Nov 27 19:54 memory_monitor_summary.json
[2025-11-27 19:55:05] -rw------- 1 boinc boinc   1516240 Nov 27 19:54 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:55:05] -rw------- 1 boinc boinc   2130250 Nov 27 19:54 log.47556137._002253.job.log.tgz.1
[2025-11-27 19:55:05] -rw------- 1 boinc boinc      8549 Nov 27 19:54 heartbeat.json
[2025-11-27 19:55:05] -rw-rw-r-- 1 boinc boinc        29 Nov 27 19:55 wrapper_checkpoint.txt
[2025-11-27 19:55:05] -rw-rw-r-- 1 boinc boinc      8192 Nov 27 19:55 boinc_mmap_file
[2025-11-27 19:55:05] -rw------- 1 boinc boinc        95 Nov 27 19:55 pilot_heartbeat.json
[2025-11-27 19:55:05] -rw------- 1 boinc boinc       821 Nov 27 19:55 pilotlog.txt
[2025-11-27 19:55:05] -rw------- 1 boinc boinc   3989165 Nov 27 19:55 log.47556137._002253.job.log.1
[2025-11-27 19:55:05] -rw------- 1 boinc boinc       353 Nov 27 19:55 output.list
[2025-11-27 19:55:05] -rw-rw-r-- 1 boinc boinc       620 Nov 27 19:55 runtime_log
[2025-11-27 19:55:05] -rw------- 1 boinc boinc   6144000 Nov 27 19:55 result.tar.gz
[2025-11-27 19:55:05] -rw-rw-r-- 1 boinc boinc      9158 Nov 27 19:55 runtime_log.err
[2025-11-27 19:55:05] -rw------- 1 boinc boinc       658 Nov 27 19:55 KGiMDms8sg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBvHKDmM20qem.diag
[2025-11-27 19:55:05] -rw-rw-r-- 1 boinc boinc     21079 Nov 27 19:55 stderr.txt
[2025-11-27 19:55:05] HITS file was successfully produced:
[2025-11-27 19:55:05] -rw------- 1 boinc boinc 922454837 Nov 27 19:53 shared/HITS.pool.root.1
[2025-11-27 19:55:05]  *** Contents of shared directory: ***
[2025-11-27 19:55:05] total 1307608
[2025-11-27 19:55:05] -rw-r--r-- 2 boinc boinc     15847 Nov 27 12:14 start_atlas.sh
[2025-11-27 19:55:05] -rw-r--r-- 2 boinc boinc    590102 Nov 27 12:14 input.tar.gz
[2025-11-27 19:55:05] -rw-r--r-- 2 boinc boinc 409768931 Nov 27 12:14 ATLAS.root_0
[2025-11-27 19:55:05] -rw------- 1 boinc boinc 922454837 Nov 27 19:53 HITS.pool.root.1
[2025-11-27 19:55:05] -rw------- 1 boinc boinc   6144000 Nov 27 19:55 result.tar.gz
19:55:07 (915623): run_atlas exited; CPU time 145528.089047
19:55:07 (915623): called boinc_finish(0)

</stderr_txt>
]]>

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