Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:48:39 (950597): wrapper (7.7.26015): starting
17:48:39 (950597): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 17:48:39] Arguments: --nthreads 8
[2025-11-25 17:48:39] Threads: 8
[2025-11-25 17:48:39] Checking for CVMFS
[2025-11-25 17:48:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:48:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:48:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:48:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:48:40] 2.13.3.0 12525 29095 233944 153300 0 630 33627498 40960001 38559 16776704 0 226415127 99.719 174966593 35836 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 17:48:40] CVMFS is ok
[2025-11-25 17:48:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:48:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:48:40] Further information can be found at the LHC@home message board.
[2025-11-25 17:48:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:48:40] Checking for apptainer binary...
[2025-11-25 17:48:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:48:40] Running /usr/bin/apptainer --version
[2025-11-25 17:48:40] apptainer version 1.4.4-1.el9
[2025-11-25 17:48:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:48:40] c7-4-30.aglt2.org
[2025-11-25 17:48:40] apptainer works
[2025-11-25 17:48:40] Set ATHENA_PROC_NUMBER=8
[2025-11-25 17:48:40] Set ATHENA_CORE_NUMBER=8
[2025-11-25 17:48:40] Starting ATLAS job with PandaID=6895476662
[2025-11-25 17:48:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:17:36]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:17:36] 2025-11-26 13:16:31,562 | INFO     | time since job start (52053s) is within the limit (172800.0s)
[2025-11-26 08:17:36] 2025-11-26 13:16:32,514 | INFO     | monitor loop #3037: job 0:6895476662 is in state 'finished'
[2025-11-26 08:17:36] 2025-11-26 13:16:32,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:17:36] 2025-11-26 13:16:32,980 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 08:17:36] 2025-11-26 13:16:32,987 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3056.716177083333
[2025-11-26 08:17:36] 2025-11-26 13:16:33,004 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6895476662/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:17:36] 2025-11-26 13:16:33,007 | INFO     | extracted standard info from prmon json
[2025-11-26 08:17:36] 2025-11-26 13:16:33,007 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:17:36] 2025-11-26 13:16:33,007 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:17:36] 2025-11-26 13:16:33,020 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:17:36] 2025-11-26 13:16:33,021 | INFO     | sum of square deviations: 192442279918.66846
[2025-11-26 08:17:36] 2025-11-26 13:16:33,043 | INFO     | sum of deviations: 1098223610189.1432
[2025-11-26 08:17:36] 2025-11-26 13:16:33,044 | INFO     | mean x: 1764136963.344666
[2025-11-26 08:17:36] 2025-11-26 13:16:33,044 | INFO     | mean y: 2893197.5369284875
[2025-11-26 08:17:36] 2025-11-26 13:16:33,044 | INFO     | intersect: -10064628687.837214
[2025-11-26 08:17:36] 2025-11-26 13:16:33,045 | INFO     | chi2: 5.886826664673204
[2025-11-26 08:17:36] 2025-11-26 13:16:33,046 | INFO     | sum of square deviations: 189078138754.57288
[2025-11-26 08:17:36] 2025-11-26 13:16:33,059 | INFO     | sum of deviations: 1365653885788.3584
[2025-11-26 08:17:36] 2025-11-26 13:16:33,059 | INFO     | mean x: 1764136810.8525944
[2025-11-26 08:17:36] 2025-11-26 13:16:33,059 | INFO     | mean y: 2905314.7228773586
[2025-11-26 08:17:36] 2025-11-26 13:16:33,060 | INFO     | intersect: -12738918286.208147
[2025-11-26 08:17:36] 2025-11-26 13:16:33,060 | INFO     | chi2: 3.050962150744159
[2025-11-26 08:17:36] 2025-11-26 13:16:33,060 | INFO     | current chi2=3.050962150744159 (change=48.17305953557361 %)
[2025-11-26 08:17:36] 2025-11-26 13:16:33,061 | INFO     | sum of square deviations: 185753233529.23843
[2025-11-26 08:17:36] 2025-11-26 13:16:33,075 | INFO     | sum of deviations: 1383085736101.109
[2025-11-26 08:17:36] 2025-11-26 13:16:33,075 | INFO     | mean x: 1764136658.355872
[2025-11-26 08:17:36] 2025-11-26 13:16:33,075 | INFO     | mean y: 2906109.169632266
[2025-11-26 08:17:36] 2025-11-26 13:16:33,075 | INFO     | intersect: -13132543553.519667
[2025-11-26 08:17:36] 2025-11-26 13:16:33,076 | INFO     | chi2: 2.961834262204717
[2025-11-26 08:17:36] 2025-11-26 13:16:33,076 | INFO     | current chi2=2.961834262204717 (change=2.921304301257976 %)
[2025-11-26 08:17:36] 2025-11-26 13:16:33,076 | INFO     | right removable region: 842
[2025-11-26 08:17:36] 2025-11-26 13:16:33,077 | INFO     | sum of square deviations: 189077439084.5728
[2025-11-26 08:17:36] 2025-11-26 13:16:33,091 | INFO     | sum of deviations: 825324950208.2981
[2025-11-26 08:17:36] 2025-11-26 13:16:33,091 | INFO     | mean x: 1764137115.8525944
[2025-11-26 08:17:36] 2025-11-26 13:16:33,091 | INFO     | mean y: 2905556.1143867923
[2025-11-26 08:17:36] 2025-11-26 13:16:33,091 | INFO     | intersect: -7697570948.91381
[2025-11-26 08:17:36] 2025-11-26 13:16:33,092 | INFO     | chi2: 3.153826828929892
[2025-11-26 08:17:36] 2025-11-26 13:16:33,092 | INFO     | current chi2=3.153826828929892 (change=46.42568893940806 %)
[2025-11-26 08:17:36] 2025-11-26 13:16:33,093 | INFO     | sum of square deviations: 185752144065.8104
[2025-11-26 08:17:36] 2025-11-26 13:16:33,108 | INFO     | sum of deviations: 780009356577.5845
[2025-11-26 08:17:36] 2025-11-26 13:16:33,108 | INFO     | mean x: 1764137268.3582444
[2025-11-26 08:17:36] 2025-11-26 13:16:33,108 | INFO     | mean y: 2907632.9086595494
[2025-11-26 08:17:36] 2025-11-26 13:16:33,109 | INFO     | intersect: -7405047642.800735
[2025-11-26 08:17:36] 2025-11-26 13:16:33,109 | INFO     | chi2: 3.1190281013960144
[2025-11-26 08:17:36] 2025-11-26 13:16:33,109 | INFO     | current chi2=3.1190281013960144 (change=1.1033810485303293 %)
[2025-11-26 08:17:36] 2025-11-26 13:16:33,109 | INFO     | left removable region: 20
[2025-11-26 08:17:36] 2025-11-26 13:16:33,110 | INFO     | sum of square deviations: 172212781112.8422
[2025-11-26 08:17:36] 2025-11-26 13:16:33,123 | INFO     | sum of deviations: 998153412875.3805
[2025-11-26 08:17:36] 2025-11-26 13:16:33,123 | INFO     | mean x: 1764137237.8734794
[2025-11-26 08:17:36] 2025-11-26 13:16:33,123 | INFO     | mean y: 2923843.5036496352
[2025-11-26 08:17:36] 2025-11-26 13:16:33,123 | INFO     | intersect: -10222098906.754047
[2025-11-26 08:17:36] 2025-11-26 13:16:33,124 | INFO     | chi2: 0.14878529821603076
[2025-11-26 08:17:36] 2025-11-26 13:16:33,125 | INFO     | current memory leak: 5.80 B/s (using 822 data points, chi2=0.15)
[2025-11-26 08:17:36] 2025-11-26 13:16:33,126 | INFO     | could have reported an average CPU frequency of 3142 MHz (32 samples)
[2025-11-26 08:17:36] 2025-11-26 13:16:33,126 | INFO     | ..............................
[2025-11-26 08:17:36] 2025-11-26 13:16:33,126 | INFO     | . Timing measurements:
[2025-11-26 08:17:36] 2025-11-26 13:16:33,126 | INFO     | . get job = 0 s
[2025-11-26 08:17:36] 2025-11-26 13:16:33,126 | INFO     | . initial setup = 2 s
[2025-11-26 08:17:36] 2025-11-26 13:16:33,126 | INFO     | . payload setup = 11 s
[2025-11-26 08:17:36] 2025-11-26 13:16:33,126 | INFO     | . stage-in = 0 s
[2025-11-26 08:17:36] 2025-11-26 13:16:33,126 | INFO     | . payload execution = 52007 s
[2025-11-26 08:17:36] 2025-11-26 13:16:33,126 | INFO     | . stage-out = 4 s
[2025-11-26 08:17:36] 2025-11-26 13:16:33,126 | INFO     | . log creation = 0 s
[2025-11-26 08:17:36] 2025-11-26 13:16:33,126 | INFO     | ..............................
[2025-11-26 08:17:36] 2025-11-26 13:16:33,204 | INFO     | 
[2025-11-26 08:17:36] 2025-11-26 13:16:33,205 | INFO     | job summary report
[2025-11-26 08:17:36] 2025-11-26 13:16:33,205 | INFO     | --------------------------------------------------
[2025-11-26 08:17:36] 2025-11-26 13:16:33,205 | INFO     | PanDA job id: 6895476662
[2025-11-26 08:17:36] 2025-11-26 13:16:33,205 | INFO     | task id: 47556149
[2025-11-26 08:17:36] 2025-11-26 13:16:33,205 | INFO     | errors: (none)
[2025-11-26 08:17:36] 2025-11-26 13:16:33,205 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:17:36] 2025-11-26 13:16:33,205 | INFO     | pilot state: finished 
[2025-11-26 08:17:36] 2025-11-26 13:16:33,205 | INFO     | transexitcode: 0
[2025-11-26 08:17:36] 2025-11-26 13:16:33,205 | INFO     | exeerrorcode: 0
[2025-11-26 08:17:36] 2025-11-26 13:16:33,205 | INFO     | exeerrordiag: 
[2025-11-26 08:17:36] 2025-11-26 13:16:33,206 | INFO     | exitcode: 0
[2025-11-26 08:17:36] 2025-11-26 13:16:33,206 | INFO     | exitmsg: OK
[2025-11-26 08:17:36] 2025-11-26 13:16:33,206 | INFO     | cpuconsumptiontime: 208061 s
[2025-11-26 08:17:36] 2025-11-26 13:16:33,206 | INFO     | nevents: 1000
[2025-11-26 08:17:36] 2025-11-26 13:16:33,206 | INFO     | neventsw: 0
[2025-11-26 08:17:36] 2025-11-26 13:16:33,206 | INFO     | pid: 963140
[2025-11-26 08:17:36] 2025-11-26 13:16:33,206 | INFO     | pgrp: 963140
[2025-11-26 08:17:36] 2025-11-26 13:16:33,206 | INFO     | corecount: 8
[2025-11-26 08:17:36] 2025-11-26 13:16:33,206 | INFO     | event service: False
[2025-11-26 08:17:36] 2025-11-26 13:16:33,206 | INFO     | sizes: {0: 2284093, 1: 2284292, 8: 2284554, 11: 2284582, 52022: 2333660, 52027: 2342654, 52030: 2342838, 52036: 2343084}
[2025-11-26 08:17:36] 2025-11-26 13:16:33,206 | INFO     | --------------------------------------------------
[2025-11-26 08:17:36] 2025-11-26 13:16:33,206 | INFO     | 
[2025-11-26 08:17:36] 2025-11-26 13:16:33,207 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-26 08:17:36] 2025-11-26 13:16:33,227 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,227 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,227 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,227 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,227 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,228 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,228 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,228 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,228 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,228 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,228 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,228 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,228 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,228 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,228 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,228 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,229 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:17:36] 2025-11-26 13:16:33,229 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,229 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:17:36] 2025-11-26 13:16:33,229 | INFO     | job 6895476662 has completed (purged errors)
[2025-11-26 08:17:36] 2025-11-26 13:16:33,229 | INFO     | overall cleanup function is called
[2025-11-26 08:17:36] 2025-11-26 13:16:34,247 | INFO     | --- collectZombieJob: --- 10, [963140]
[2025-11-26 08:17:36] 2025-11-26 13:16:34,247 | INFO     | zombie collector waiting for pid 963140
[2025-11-26 08:17:36] 2025-11-26 13:16:34,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:17:36] 2025-11-26 13:16:34,248 | INFO     | collected zombie processes
[2025-11-26 08:17:36] 2025-11-26 13:16:34,248 | INFO     | will attempt to kill all subprocesses of pid=963140
[2025-11-26 08:17:36] 2025-11-26 13:16:35,148 | INFO     | process IDs to be killed: [963140] (in reverse order)
[2025-11-26 08:17:36] 2025-11-26 13:16:35,341 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:17:36] 2025-11-26 13:16:35,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:17:36] 2025-11-26 13:16:35,369 | INFO     | did not find any defunct processes belonging to 963140
[2025-11-26 08:17:36] 2025-11-26 13:16:35,394 | INFO     | did not find any defunct processes belonging to 963140
[2025-11-26 08:17:36] 2025-11-26 13:16:35,402 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:17:36] 2025-11-26 13:16:35,403 | INFO     | ready for new job
[2025-11-26 08:17:36] 2025-11-26 13:16:35,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:17:36] 2025-11-26 13:16:35,411 | INFO     | ***************************************
[2025-11-26 08:17:36] 2025-11-26 13:16:35,412 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:17:36] 2025-11-26 13:16:35,412 | INFO     | ***************************************
[2025-11-26 08:17:36] 2025-11-26 13:16:35,412 | INFO     | 
[2025-11-26 08:17:36] 2025-11-26 13:16:35,421 | INFO     | architecture information:
[2025-11-26 08:17:36] 2025-11-26 13:16:35,422 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:17:36] 2025-11-26 13:16:35,450 | INFO     | cat /etc/os-release:
[2025-11-26 08:17:36] NAME="CentOS Linux"
[2025-11-26 08:17:36] VERSION="7 (Core)"
[2025-11-26 08:17:36] ID="centos"
[2025-11-26 08:17:36] ID_LIKE="rhel fedora"
[2025-11-26 08:17:36] VERSION_ID="7"
[2025-11-26 08:17:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:17:36] ANSI_COLOR="0;31"
[2025-11-26 08:17:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:17:36] HOME_URL="https://www.centos.org/"
[2025-11-26 08:17:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:17:36] 
[2025-11-26 08:17:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:17:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:17:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:17:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:17:36] 
[2025-11-26 08:17:36] 2025-11-26 13:16:35,451 | INFO     | ***************************************
[2025-11-26 08:17:36] 2025-11-26 13:16:35,954 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-26 08:17:36] 2025-11-26 13:16:35,978 | INFO     | sufficient remaining disk space (120817975296 B)
[2025-11-26 08:17:36] 2025-11-26 13:16:35,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:17:36] 2025-11-26 13:16:35,985 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:17:36] 2025-11-26 13:16:35,985 | INFO     | update_server=False
[2025-11-26 08:17:36] 2025-11-26 13:16:35,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:17:36] 2025-11-26 13:16:36,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:17:36] 2025-11-26 13:16:36,024 | INFO     | aborting loop
[2025-11-26 08:17:36] 2025-11-26 13:16:36,327 | INFO     | all job control threads have been joined
[2025-11-26 08:17:36] 2025-11-26 13:16:36,685 | INFO     | all data control threads have been joined
[2025-11-26 08:17:36] 2025-11-26 13:16:36,739 | INFO     | all payload control threads have been joined
[2025-11-26 08:17:36] 2025-11-26 13:16:36,991 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:37,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:17:36] 2025-11-26 13:16:37,028 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:37,358 | INFO     | [job] control thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:37,673 | INFO     | [job] validate thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:37,690 | INFO     | [data] control thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:37,745 | INFO     | [payload] control thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:37,771 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:37,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:17:36] 2025-11-26 13:16:37,878 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:38,126 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:38,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:17:36] 2025-11-26 13:16:38,263 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:38,324 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:38,358 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:38,366 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:39,016 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:39,226 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:16:41,884 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:17:36] 2025-11-26 13:17:05,718 | INFO     | PID=954332 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 08:17:36] 2025-11-26 13:17:05,718 | INFO     | .. there are 61 such processes running
[2025-11-26 08:17:36] 2025-11-26 13:17:05,719 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:17:36] 2025-11-26 13:17:05,719 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:17:36] 2025-11-26 13:17:05,719 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:17:36] 2025-11-26 13:17:29,610 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:17:36] 2025-11-26 13:17:30,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005856261952)>', '<ExcThread(monitor, started 140005355792128)>']
[2025-11-26 08:17:36] 2025-11-26 13:17:30,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:17:36] 2025-11-26 13:17:30,868 | INFO     | [monitor] control thread has ended
[2025-11-26 08:17:36] 2025-11-26 13:17:35,684 | INFO     | all workflow threads have been joined
[2025-11-26 08:17:36] 2025-11-26 13:17:35,684 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:17:36] 2025-11-26 13:17:35,685 | INFO     | traces error code: 0
[2025-11-26 08:17:36] 2025-11-26 13:17:35,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:17:36] 2025-11-26 13:17:36,068 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:17:36] 2025-11-26 13:17:36,071 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:17:36] 2025-11-26 13:17:36,074 [wrapper] pilotpid: 954332
[2025-11-26 08:17:36] 2025-11-26 13:17:36,077 [wrapper] Pilot exit status: 0
[2025-11-26 08:17:36] 2025-11-26 13:17:36,097 [wrapper] pandaids: 6895476662
[2025-11-26 08:17:36] 2025-11-26 13:17:36,266 [wrapper] cleanup supervisor_pilot 1562237 954333
[2025-11-26 08:17:36] 2025-11-26 13:17:36,269 [wrapper] Test setup, not cleaning
[2025-11-26 08:17:36] 2025-11-26 13:17:36,274 [wrapper] apfmon messages muted
[2025-11-26 08:17:36] 2025-11-26 13:17:36,307 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:17:36] 2025-11-26 13:17:36,311 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:17:36]  *** Error codes and diagnostics ***
[2025-11-26 08:17:36]     "exeErrorCode": 0,
[2025-11-26 08:17:36]     "exeErrorDiag": "",
[2025-11-26 08:17:36]     "pilotErrorCode": 0,
[2025-11-26 08:17:36]     "pilotErrorDiag": "",
[2025-11-26 08:17:36]  *** Listing of results directory ***
[2025-11-26 08:17:36] total 1346260
[2025-11-26 08:17:36] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 04:01 pilot3.tar.gz
[2025-11-26 08:17:36] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 04:33 queuedata.json
[2025-11-26 08:17:36] -rwx------. 1 boincer umatlas     36292 Nov 24 04:34 runpilot2-wrapper.sh
[2025-11-26 08:17:36] -rw-r--r--. 1 boincer umatlas       100 Nov 25 17:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:17:36] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 17:48 run_atlas
[2025-11-26 08:17:36] -rw-r--r--. 1 boincer umatlas       105 Nov 25 17:48 job.xml
[2025-11-26 08:17:36] -rw-r--r--. 2 boincer umatlas 410743187 Nov 25 17:48 EVNT.47483658._001299.pool.root.1
[2025-11-26 08:17:36] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 17:48 shared
[2025-11-26 08:17:36] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 17:48 input.tar.gz
[2025-11-26 08:17:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:48 start_atlas.sh
[2025-11-26 08:17:36] -rw-r--r--. 1 boincer umatlas         0 Nov 25 17:48 boinc_lockfile
[2025-11-26 08:17:36] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 17:48 pandaJob.out
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas        57 Nov 25 17:48 setup.sh.local
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas    991877 Nov 25 17:48 agis_schedconf.cvmfs.json
[2025-11-26 08:17:36] drwx------. 5 boincer umatlas      4096 Nov 25 17:48 pilot3
[2025-11-26 08:17:36] -rw-r--r--. 1 boincer umatlas       533 Nov 26 08:08 boinc_task_state.xml
[2025-11-26 08:17:36] -rw-r--r--. 1 boincer umatlas      6949 Nov 26 08:13 init_data.xml
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas 946946939 Nov 26 08:15 HITS.47556149._002853.pool.root.1
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas        95 Nov 26 08:16 pilot_heartbeat.json
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas      1060 Nov 26 08:16 memory_monitor_summary.json
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:16 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas   2015205 Nov 26 08:16 log.47556149._002853.job.log.tgz.1
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas      8606 Nov 26 08:16 heartbeat.json
[2025-11-26 08:17:36] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:17 boinc_mmap_file
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas      4825 Nov 26 08:17 pilotlog.txt
[2025-11-26 08:17:36] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:17 wrapper_checkpoint.txt
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas   6463359 Nov 26 08:17 log.47556149._002853.job.log.1
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas       353 Nov 26 08:17 output.list
[2025-11-26 08:17:36] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:17 runtime_log
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas   8499200 Nov 26 08:17 result.tar.gz
[2025-11-26 08:17:36] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 08:17 runtime_log.err
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas       663 Nov 26 08:17 kmwKDmk8hh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmI0IKDmASDwGm.diag
[2025-11-26 08:17:36] -rw-r--r--. 1 boincer umatlas     21331 Nov 26 08:17 stderr.txt
[2025-11-26 08:17:36] HITS file was successfully produced:
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas 946946939 Nov 26 08:15 shared/HITS.pool.root.1
[2025-11-26 08:17:36]  *** Contents of shared directory: ***
[2025-11-26 08:17:36] total 1334780
[2025-11-26 08:17:36] -rw-r--r--. 2 boincer umatlas 410743187 Nov 25 17:48 ATLAS.root_0
[2025-11-26 08:17:36] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 17:48 input.tar.gz
[2025-11-26 08:17:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:48 start_atlas.sh
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas 946946939 Nov 26 08:15 HITS.pool.root.1
[2025-11-26 08:17:36] -rw-------. 1 boincer umatlas   8499200 Nov 26 08:17 result.tar.gz
08:17:37 (950597): run_atlas exited; CPU time 209282.544726
08:17:37 (950597): called boinc_finish(0)

</stderr_txt>
]]>

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