Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:54:18 (3275201): wrapper (7.7.26015): starting
17:54:18 (3275201): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 17:54:18] Arguments: --nthreads 9
[2025-11-25 17:54:18] Threads: 9
[2025-11-25 17:54:18] Checking for CVMFS
[2025-11-25 17:54:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:54:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:54:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:54:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:54:19] 2.13.3.0 15397 29097 243252 153300 2 851 30774150 32935936 43139 16776704 0 293681241 99.627 279595718 36536 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 17:54:19] CVMFS is ok
[2025-11-25 17:54:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:54:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:54:19] Further information can be found at the LHC@home message board.
[2025-11-25 17:54:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:54:19] Checking for apptainer binary...
[2025-11-25 17:54:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:54:19] Running /usr/bin/apptainer --version
[2025-11-25 17:54:19] apptainer version 1.4.4-1.el9
[2025-11-25 17:54:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:54:19] c7-16-8.aglt2.org
[2025-11-25 17:54:19] apptainer works
[2025-11-25 17:54:19] Set ATHENA_PROC_NUMBER=9
[2025-11-25 17:54:19] Set ATHENA_CORE_NUMBER=9
[2025-11-25 17:54:19] Starting ATLAS job with PandaID=6896297569
[2025-11-25 17:54:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:20:12 (3275201): BOINC client no longer exists - exiting
22:20:12 (3275201): timer handler: client dead, exiting
22:31:40 (1289086): wrapper (7.7.26015): starting
22:31:40 (1289086): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 22:31:40] Arguments: --nthreads 8
[2025-11-25 22:31:40] Threads: 8
[2025-11-25 22:31:40] This job has been restarted, cleaning up previous attempt
[2025-11-25 22:31:40] Checking for CVMFS
[2025-11-25 22:31:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:31:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:31:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:31:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:31:40] 2.13.3.0 15397 29374 237292 153307 1 747 31012748 32935936 35055 16776704 0 297281663 99.623 284852886 36428 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 22:31:40] CVMFS is ok
[2025-11-25 22:31:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:31:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:31:40] Further information can be found at the LHC@home message board.
[2025-11-25 22:31:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:31:40] Checking for apptainer binary...
[2025-11-25 22:31:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:31:40] Running /usr/bin/apptainer --version
[2025-11-25 22:31:40] apptainer version 1.4.4-1.el9
[2025-11-25 22:31:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:31:41] c7-16-8.aglt2.org
[2025-11-25 22:31:41] apptainer works
[2025-11-25 22:31:41] Set ATHENA_PROC_NUMBER=8
[2025-11-25 22:31:41] Set ATHENA_CORE_NUMBER=8
[2025-11-25 22:31:41] Starting ATLAS job with PandaID=6896297569
[2025-11-25 22:31:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:20:08 (1289086): BOINC client no longer exists - exiting
23:20:08 (1289086): timer handler: client dead, exiting
23:31:54 (748105): wrapper (7.7.26015): starting
23:31:54 (748105): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 23:31:54] Arguments: --nthreads 8
[2025-11-26 23:31:54] Threads: 8
[2025-11-26 23:31:54] This job has been restarted, cleaning up previous attempt
[2025-11-26 23:31:55] Checking for CVMFS
[2025-11-26 23:31:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 23:31:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 23:31:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 23:31:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 23:31:55] 2.13.3.0 15397 30874 222568 153347 1 206 27836279 32935936 50353 16776704 0 318365573 99.620 305969494 35775 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 23:31:55] CVMFS is ok
[2025-11-26 23:31:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 23:31:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 23:31:55] Further information can be found at the LHC@home message board.
[2025-11-26 23:31:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:31:55] Checking for apptainer binary...
[2025-11-26 23:31:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 23:31:55] Running /usr/bin/apptainer --version
[2025-11-26 23:31:55] apptainer version 1.4.4-1.el9
[2025-11-26 23:31:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:31:55] c7-16-8.aglt2.org
[2025-11-26 23:31:55] apptainer works
[2025-11-26 23:31:55] Set ATHENA_PROC_NUMBER=8
[2025-11-26 23:31:55] Set ATHENA_CORE_NUMBER=8
[2025-11-26 23:31:55] Starting ATLAS job with PandaID=6896297569
[2025-11-26 23:31:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:12:23]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:12:23] 2025-11-28 00:11:22,064 | INFO     | monitor loop #3607: job 0:6896297569 is in state 'finished'
[2025-11-27 19:12:23] 2025-11-28 00:11:22,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 19:12:23] 2025-11-28 00:11:23,473 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 19:12:23] 2025-11-28 00:11:23,478 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3245.866677083333
[2025-11-27 19:12:23] 2025-11-28 00:11:23,492 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6896297569/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 19:12:23] 2025-11-28 00:11:23,493 | INFO     | extracted standard info from prmon json
[2025-11-27 19:12:23] 2025-11-28 00:11:23,493 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:12:23] 2025-11-28 00:11:23,493 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:12:23] 2025-11-28 00:11:23,507 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:12:23] 2025-11-28 00:11:23,508 | INFO     | sum of square deviations: 484008091683.6686
[2025-11-27 19:12:23] 2025-11-28 00:11:23,530 | INFO     | sum of deviations: 2351546145154.475
[2025-11-27 19:12:23] 2025-11-28 00:11:23,530 | INFO     | mean x: 1764253312.4551723
[2025-11-27 19:12:23] 2025-11-28 00:11:23,530 | INFO     | mean y: 2932966.0956896553
[2025-11-27 19:12:23] 2025-11-28 00:11:23,530 | INFO     | intersect: -8568665623.399464
[2025-11-27 19:12:23] 2025-11-28 00:11:23,531 | INFO     | chi2: 5.594478518865413
[2025-11-27 19:12:23] 2025-11-28 00:11:23,532 | INFO     | sum of square deviations: 477776647659.0872
[2025-11-27 19:12:23] 2025-11-28 00:11:23,554 | INFO     | sum of deviations: 2725222780907.4775
[2025-11-27 19:12:23] 2025-11-28 00:11:23,554 | INFO     | mean x: 1764253159.9593074
[2025-11-27 19:12:23] 2025-11-28 00:11:23,554 | INFO     | mean y: 2942107.0528138527
[2025-11-27 19:12:23] 2025-11-28 00:11:23,555 | INFO     | intersect: -10060301725.32427
[2025-11-27 19:12:23] 2025-11-28 00:11:23,555 | INFO     | chi2: 2.690301925554883
[2025-11-27 19:12:23] 2025-11-28 00:11:23,556 | INFO     | current chi2=2.690301925554883 (change=51.911479926452756 %)
[2025-11-27 19:12:23] 2025-11-28 00:11:23,556 | INFO     | sum of square deviations: 471598785029.8163
[2025-11-27 19:12:23] 2025-11-28 00:11:23,578 | INFO     | sum of deviations: 2804181626934.139
[2025-11-27 19:12:23] 2025-11-28 00:11:23,578 | INFO     | mean x: 1764253007.461739
[2025-11-27 19:12:23] 2025-11-28 00:11:23,578 | INFO     | mean y: 2944050.412173913
[2025-11-27 19:12:23] 2025-11-28 00:11:23,578 | INFO     | intersect: -10487511026.724466
[2025-11-27 19:12:23] 2025-11-28 00:11:23,579 | INFO     | chi2: 2.3187265803046264
[2025-11-27 19:12:23] 2025-11-28 00:11:23,579 | INFO     | current chi2=2.3187265803046264 (change=13.811659640157966 %)
[2025-11-27 19:12:23] 2025-11-28 00:11:23,579 | INFO     | right removable region: 1149
[2025-11-27 19:12:23] 2025-11-28 00:11:23,580 | INFO     | sum of square deviations: 477776112934.9208
[2025-11-27 19:12:23] 2025-11-28 00:11:23,601 | INFO     | sum of deviations: 2057764622676.227
[2025-11-27 19:12:23] 2025-11-28 00:11:23,601 | INFO     | mean x: 1764253464.9575758
[2025-11-27 19:12:23] 2025-11-28 00:11:23,601 | INFO     | mean y: 2940145.78008658
[2025-11-27 19:12:23] 2025-11-28 00:11:23,602 | INFO     | intersect: -7595636399.460805
[2025-11-27 19:12:23] 2025-11-28 00:11:23,602 | INFO     | chi2: 3.608641843383622
[2025-11-27 19:12:23] 2025-11-28 00:11:23,603 | INFO     | current chi2=3.608641843383622 (change=35.49636787030739 %)
[2025-11-27 19:12:23] 2025-11-28 00:11:23,603 | INFO     | sum of square deviations: 471598067857.41254
[2025-11-27 19:12:23] 2025-11-28 00:11:23,612 | INFO     | time since job start (70754s) is within the limit (172800.0s)
[2025-11-27 19:12:23] 2025-11-28 00:11:23,628 | INFO     | sum of deviations: 1976646682397.9702
[2025-11-27 19:12:23] 2025-11-28 00:11:23,628 | INFO     | mean x: 1764253617.4573913
[2025-11-27 19:12:23] 2025-11-28 00:11:23,628 | INFO     | mean y: 2942147.3973913044
[2025-11-27 19:12:23] 2025-11-28 00:11:23,629 | INFO     | intersect: -7391715077.767821
[2025-11-27 19:12:23] 2025-11-28 00:11:23,629 | INFO     | chi2: 3.5500094302874765
[2025-11-27 19:12:23] 2025-11-28 00:11:23,630 | INFO     | current chi2=3.5500094302874765 (change=1.624777842767826 %)
[2025-11-27 19:12:23] 2025-11-28 00:11:23,630 | INFO     | left removable region: 20
[2025-11-27 19:12:23] 2025-11-28 00:11:23,630 | INFO     | sum of square deviations: 446232164659.5107
[2025-11-27 19:12:23] 2025-11-28 00:11:23,651 | INFO     | sum of deviations: 2311175753294.787
[2025-11-27 19:12:23] 2025-11-28 00:11:23,651 | INFO     | mean x: 1764253586.9636846
[2025-11-27 19:12:23] 2025-11-28 00:11:23,651 | INFO     | mean y: 2956151.311780337
[2025-11-27 19:12:23] 2025-11-28 00:11:23,651 | INFO     | intersect: -9134664208.182219
[2025-11-27 19:12:23] 2025-11-28 00:11:23,652 | INFO     | chi2: 0.23540264022791355
[2025-11-27 19:12:23] 2025-11-28 00:11:23,652 | INFO     | current memory leak: 5.18 B/s (using 1129 data points, chi2=0.24)
[2025-11-27 19:12:23] 2025-11-28 00:11:23,653 | INFO     | could have reported an average CPU frequency of 3155 MHz (42 samples)
[2025-11-27 19:12:23] 2025-11-28 00:11:23,653 | INFO     | ..............................
[2025-11-27 19:12:23] 2025-11-28 00:11:23,654 | INFO     | . Timing measurements:
[2025-11-27 19:12:23] 2025-11-28 00:11:23,654 | INFO     | . get job = 0 s
[2025-11-27 19:12:23] 2025-11-28 00:11:23,654 | INFO     | . initial setup = 2 s
[2025-11-27 19:12:23] 2025-11-28 00:11:23,654 | INFO     | . payload setup = 7 s
[2025-11-27 19:12:23] 2025-11-28 00:11:23,654 | INFO     | . stage-in = 0 s
[2025-11-27 19:12:23] 2025-11-28 00:11:23,654 | INFO     | . payload execution = 70716 s
[2025-11-27 19:12:23] 2025-11-28 00:11:23,654 | INFO     | . stage-out = 3 s
[2025-11-27 19:12:23] 2025-11-28 00:11:23,654 | INFO     | . log creation = 0 s
[2025-11-27 19:12:23] 2025-11-28 00:11:23,654 | INFO     | ..............................
[2025-11-27 19:12:23] 2025-11-28 00:11:23,723 | INFO     | 
[2025-11-27 19:12:23] 2025-11-28 00:11:23,723 | INFO     | job summary report
[2025-11-27 19:12:23] 2025-11-28 00:11:23,723 | INFO     | --------------------------------------------------
[2025-11-27 19:12:23] 2025-11-28 00:11:23,723 | INFO     | PanDA job id: 6896297569
[2025-11-27 19:12:23] 2025-11-28 00:11:23,723 | INFO     | task id: 47556149
[2025-11-27 19:12:23] 2025-11-28 00:11:23,723 | INFO     | errors: (none)
[2025-11-27 19:12:23] 2025-11-28 00:11:23,723 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:12:23] 2025-11-28 00:11:23,723 | INFO     | pilot state: finished 
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | transexitcode: 0
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | exeerrorcode: 0
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | exeerrordiag: 
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | exitcode: 0
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | exitmsg: OK
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | cpuconsumptiontime: 201526 s
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | nevents: 1000
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | neventsw: 0
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | pid: 835437
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | pgrp: 835437
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | corecount: 8
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | event service: False
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | sizes: {0: 2284093, 1: 2284292, 7: 2284554, 11: 2284582, 70728: 2341556, 70731: 2350550, 70732: 2350734, 70738: 2350980}
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | --------------------------------------------------
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | 
[2025-11-27 19:12:23] 2025-11-28 00:11:23,724 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 19:12:23] 2025-11-28 00:11:23,739 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,740 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:12:23] 2025-11-28 00:11:23,741 | INFO     | job 6896297569 has completed (purged errors)
[2025-11-27 19:12:23] 2025-11-28 00:11:23,741 | INFO     | overall cleanup function is called
[2025-11-27 19:12:23] 2025-11-28 00:11:24,756 | INFO     | --- collectZombieJob: --- 10, [835437]
[2025-11-27 19:12:23] 2025-11-28 00:11:24,758 | INFO     | zombie collector waiting for pid 835437
[2025-11-27 19:12:23] 2025-11-28 00:11:24,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:12:23] 2025-11-28 00:11:24,759 | INFO     | collected zombie processes
[2025-11-27 19:12:23] 2025-11-28 00:11:24,759 | INFO     | will attempt to kill all subprocesses of pid=835437
[2025-11-27 19:12:23] 2025-11-28 00:11:25,441 | INFO     | process IDs to be killed: [835437] (in reverse order)
[2025-11-27 19:12:23] 2025-11-28 00:11:25,629 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:12:23] 2025-11-28 00:11:25,630 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:12:23] 2025-11-28 00:11:25,654 | INFO     | did not find any defunct processes belonging to 835437
[2025-11-27 19:12:23] 2025-11-28 00:11:25,686 | INFO     | did not find any defunct processes belonging to 835437
[2025-11-27 19:12:23] 2025-11-28 00:11:25,687 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:12:23] 2025-11-28 00:11:25,687 | INFO     | ready for new job
[2025-11-27 19:12:23] 2025-11-28 00:11:25,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:12:23] 2025-11-28 00:11:25,691 | INFO     | ***************************************
[2025-11-27 19:12:23] 2025-11-28 00:11:25,691 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:12:23] 2025-11-28 00:11:25,691 | INFO     | ***************************************
[2025-11-27 19:12:23] 2025-11-28 00:11:25,691 | INFO     | 
[2025-11-27 19:12:23] 2025-11-28 00:11:25,694 | INFO     | architecture information:
[2025-11-27 19:12:23] 2025-11-28 00:11:25,695 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:12:23] 2025-11-28 00:11:25,711 | INFO     | cat /etc/os-release:
[2025-11-27 19:12:23] NAME="CentOS Linux"
[2025-11-27 19:12:23] VERSION="7 (Core)"
[2025-11-27 19:12:23] ID="centos"
[2025-11-27 19:12:23] ID_LIKE="rhel fedora"
[2025-11-27 19:12:23] VERSION_ID="7"
[2025-11-27 19:12:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:12:23] ANSI_COLOR="0;31"
[2025-11-27 19:12:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:12:23] HOME_URL="https://www.centos.org/"
[2025-11-27 19:12:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:12:23] 
[2025-11-27 19:12:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:12:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:12:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:12:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:12:23] 
[2025-11-27 19:12:23] 2025-11-28 00:11:25,711 | INFO     | ***************************************
[2025-11-27 19:12:23] 2025-11-28 00:11:26,215 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 19:12:23] 2025-11-28 00:11:26,231 | INFO     | sufficient remaining disk space (66151514112 B)
[2025-11-27 19:12:23] 2025-11-28 00:11:26,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:12:23] 2025-11-28 00:11:26,232 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:12:23] 2025-11-28 00:11:26,232 | INFO     | update_server=False
[2025-11-27 19:12:23] 2025-11-28 00:11:26,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:12:23] 2025-11-28 00:11:26,232 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:12:23] 2025-11-28 00:11:26,232 | INFO     | aborting loop
[2025-11-27 19:12:23] 2025-11-28 00:11:26,759 | INFO     | all job control threads have been joined
[2025-11-27 19:12:23] 2025-11-28 00:11:26,795 | INFO     | all data control threads have been joined
[2025-11-27 19:12:23] 2025-11-28 00:11:27,120 | INFO     | all payload control threads have been joined
[2025-11-27 19:12:23] 2025-11-28 00:11:27,238 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:27,239 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:27,467 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:27,599 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:12:23] 2025-11-28 00:11:27,644 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:27,728 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:27,765 | INFO     | [job] control thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:27,801 | INFO     | [data] control thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:27,814 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:28,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:12:23] 2025-11-28 00:11:28,125 | INFO     | [payload] control thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:28,177 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:28,313 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:28,336 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:28,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:12:23] 2025-11-28 00:11:28,740 | INFO     | [job] validate thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:29,607 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:29,745 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:32,127 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:12:23] 2025-11-28 00:11:57,532 | INFO     | PID=776615 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 19:12:23] 2025-11-28 00:11:57,532 | INFO     | .. there are 80 such processes running
[2025-11-27 19:12:23] 2025-11-28 00:11:57,532 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:12:23] 2025-11-28 00:11:57,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:12:23] 2025-11-28 00:11:57,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:12:23] 2025-11-28 00:12:17,926 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:12:23] 2025-11-28 00:12:18,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243505698624)>', '<ExcThread(monitor, started 140243021850368)>']
[2025-11-27 19:12:23] 2025-11-28 00:12:18,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:12:23] 2025-11-28 00:12:18,650 | INFO     | [monitor] control thread has ended
[2025-11-27 19:12:23] 2025-11-28 00:12:23,251 | INFO     | all workflow threads have been joined
[2025-11-27 19:12:23] 2025-11-28 00:12:23,251 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:12:23] 2025-11-28 00:12:23,252 | INFO     | traces error code: 0
[2025-11-27 19:12:23] 2025-11-28 00:12:23,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:12:23] 2025-11-28 00:12:23,409 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:12:23] 2025-11-28 00:12:23,412 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:12:23] 2025-11-28 00:12:23,415 [wrapper] pilotpid: 776615
[2025-11-27 19:12:23] 2025-11-28 00:12:23,418 [wrapper] Pilot exit status: 0
[2025-11-27 19:12:23] 2025-11-28 00:12:23,431 [wrapper] pandaids: 6896297569 6896297569 6896297569
[2025-11-27 19:12:23] 2025-11-28 00:12:23,573 [wrapper] cleanup supervisor_pilot   34102 776616
[2025-11-27 19:12:23] 2025-11-28 00:12:23,576 [wrapper] Test setup, not cleaning
[2025-11-27 19:12:23] 2025-11-28 00:12:23,580 [wrapper] apfmon messages muted
[2025-11-27 19:12:23] 2025-11-28 00:12:23,582 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:12:23] 2025-11-28 00:12:23,584 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:12:23]  *** Error codes and diagnostics ***
[2025-11-27 19:12:23]     "exeErrorCode": 0,
[2025-11-27 19:12:23]     "exeErrorDiag": "",
[2025-11-27 19:12:23]     "pilotErrorCode": 0,
[2025-11-27 19:12:23]     "pilotErrorDiag": "",
[2025-11-27 19:12:23]  *** Listing of results directory ***
[2025-11-27 19:12:23] total 1712384
[2025-11-27 19:12:23] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-27 19:12:23] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 19:10 pilot3.tar.gz
[2025-11-27 19:12:23] -rwx------. 1 boincer umatlas     36292 Nov 24 20:03 runpilot2-wrapper.sh
[2025-11-27 19:12:23] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 20:03 queuedata.json
[2025-11-27 19:12:23] -rw-r--r--. 1 boincer umatlas       100 Nov 25 17:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:12:23] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 17:54 run_atlas
[2025-11-27 19:12:23] -rw-r--r--. 1 boincer umatlas       105 Nov 25 17:54 job.xml
[2025-11-27 19:12:23] -rw-r--r--. 3 boincer umatlas 409141328 Nov 25 17:54 EVNT.47483658._001466.pool.root.1
[2025-11-27 19:12:23] -rw-r--r--. 3 boincer umatlas 409141328 Nov 25 17:54 ATLAS.root_0
[2025-11-27 19:12:23] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:54 start_atlas.sh
[2025-11-27 19:12:23] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 17:54 shared
[2025-11-27 19:12:23] -rw-r--r--. 2 boincer umatlas    590098 Nov 25 17:54 input.tar.gz
[2025-11-27 19:12:23] -rw-r--r--. 1 boincer umatlas         0 Nov 25 17:54 boinc_lockfile
[2025-11-27 19:12:23] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 23:31 pandaJob.out
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas        57 Nov 26 23:31 setup.sh.local
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas    991570 Nov 26 23:32 agis_schedconf.cvmfs.json
[2025-11-27 19:12:23] -rw-r--r--. 1 boincer umatlas       534 Nov 27 19:03 boinc_task_state.xml
[2025-11-27 19:12:23] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 19:10 init_data.xml
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas 910632402 Nov 27 19:10 HITS.47556149._004529.pool.root.1
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas      1070 Nov 27 19:11 memory_monitor_summary.json
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:11 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas   2176656 Nov 27 19:11 log.47556149._004529.job.log.tgz.1
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas        96 Nov 27 19:11 pilot_heartbeat.json
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas      8629 Nov 27 19:11 heartbeat.json
[2025-11-27 19:12:23] -rw-r--r--. 1 boincer umatlas        30 Nov 27 19:12 wrapper_checkpoint.txt
[2025-11-27 19:12:23] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:12 boinc_mmap_file
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas      4823 Nov 27 19:12 pilotlog.txt
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas   8136458 Nov 27 19:12 log.47556149._004529.job.log.1
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas       353 Nov 27 19:12 output.list
[2025-11-27 19:12:23] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:12 runtime_log
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas  10332160 Nov 27 19:12 result.tar.gz
[2025-11-27 19:12:23] -rw-r--r--. 1 boincer umatlas      9423 Nov 27 19:12 runtime_log.err
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas       915 Nov 27 19:12 NYUKDmAewh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmo1LKDmiiRA0m.diag
[2025-11-27 19:12:23] -rw-r--r--. 1 boincer umatlas     25691 Nov 27 19:12 stderr.txt
[2025-11-27 19:12:23] HITS file was successfully produced:
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas 910632402 Nov 27 19:10 shared/HITS.pool.root.1
[2025-11-27 19:12:23]  *** Contents of shared directory: ***
[2025-11-27 19:12:23] total 1299544
[2025-11-27 19:12:23] -rw-r--r--. 3 boincer umatlas 409141328 Nov 25 17:54 ATLAS.root_0
[2025-11-27 19:12:23] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:54 start_atlas.sh
[2025-11-27 19:12:23] -rw-r--r--. 2 boincer umatlas    590098 Nov 25 17:54 input.tar.gz
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas 910632402 Nov 27 19:10 HITS.pool.root.1
[2025-11-27 19:12:23] -rw-------. 1 boincer umatlas  10332160 Nov 27 19:12 result.tar.gz
19:12:25 (748105): run_atlas exited; CPU time 203899.377599
19:12:25 (748105): called boinc_finish(0)

</stderr_txt>
]]>

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