Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:33:13 (3683868): wrapper (7.7.26015): starting
23:33:13 (3683868): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 23:33:13] Arguments: --nthreads 8
[2025-11-25 23:33:13] Threads: 8
[2025-11-25 23:33:13] Checking for CVMFS
[2025-11-25 23:33:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:33:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:33:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:33:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:33:15] 2.13.3.0 11226 27877 328580 153309 2 96 23819442 32935936 17032 16776704 0 65099047 99.473 89931966 40157 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 23:33:15] CVMFS is ok
[2025-11-25 23:33:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:33:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:33:15] Further information can be found at the LHC@home message board.
[2025-11-25 23:33:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:33:15] Checking for apptainer binary...
[2025-11-25 23:33:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:33:15] Running /usr/bin/apptainer --version
[2025-11-25 23:33:15] apptainer version 1.4.4-1.el9
[2025-11-25 23:33:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:33:16] c6-2-29-3.aglt2.org
[2025-11-25 23:33:16] apptainer works
[2025-11-25 23:33:16] Set ATHENA_PROC_NUMBER=8
[2025-11-25 23:33:16] Set ATHENA_CORE_NUMBER=8
[2025-11-25 23:33:16] Starting ATLAS job with PandaID=6893860949
[2025-11-25 23:33:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:20:15]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:20:15] 2025-11-26 22:19:18,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:20:15] 2025-11-26 22:19:18,489 | INFO     | time since job start (63902s) is within the limit (172800.0s)
[2025-11-26 17:20:15] 2025-11-26 22:19:20,498 | INFO     | time since job start (63904s) is within the limit (172800.0s)
[2025-11-26 17:20:15] 2025-11-26 22:19:20,787 | INFO     | monitor loop #4124: job 0:6893860949 is in state 'finished'
[2025-11-26 17:20:15] 2025-11-26 22:19:20,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:20:15] 2025-11-26 22:19:22,156 | INFO     | PID=3688101 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:20:15] 2025-11-26 22:19:22,156 | INFO     | .. there are 24 such processes running
[2025-11-26 17:20:15] 2025-11-26 22:19:23,157 | INFO     | time since job start (63907s) is within the limit (172800.0s)
[2025-11-26 17:20:15] 2025-11-26 22:19:23,298 | INFO     | monitor loop #4125: job 0:6893860949 is in state 'finished'
[2025-11-26 17:20:15] 2025-11-26 22:19:23,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:20:15] 2025-11-26 22:19:23,767 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 17:20:15] 2025-11-26 22:19:23,775 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2973.5827321428574
[2025-11-26 17:20:15] 2025-11-26 22:19:23,790 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893860949/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:20:15] 2025-11-26 22:19:23,791 | INFO     | extracted standard info from prmon json
[2025-11-26 17:20:15] 2025-11-26 22:19:23,791 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:20:15] 2025-11-26 22:19:23,791 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:20:15] 2025-11-26 22:19:23,807 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:20:15] 2025-11-26 22:19:23,810 | INFO     | sum of square deviations: 354891009801.20154
[2025-11-26 17:20:15] 2025-11-26 22:19:23,852 | INFO     | sum of deviations: 2037130119852.3015
[2025-11-26 17:20:15] 2025-11-26 22:19:23,852 | INFO     | mean x: 1764163651.8556406
[2025-11-26 17:20:15] 2025-11-26 22:19:23,853 | INFO     | mean y: 2917903.915869981
[2025-11-26 17:20:15] 2025-11-26 22:19:23,853 | INFO     | intersect: -10123658459.787745
[2025-11-26 17:20:15] 2025-11-26 22:19:23,854 | INFO     | chi2: 14.433426989253004
[2025-11-26 17:20:15] 2025-11-26 22:19:23,859 | INFO     | sum of square deviations: 349826724064.4687
[2025-11-26 17:20:15] 2025-11-26 22:19:23,904 | INFO     | sum of deviations: 2395523106174.2764
[2025-11-26 17:20:15] 2025-11-26 22:19:23,905 | INFO     | mean x: 1764163499.3621519
[2025-11-26 17:20:15] 2025-11-26 22:19:23,905 | INFO     | mean y: 2928694.646493756
[2025-11-26 17:20:15] 2025-11-26 22:19:23,905 | INFO     | intersect: -12077607568.250582
[2025-11-26 17:20:15] 2025-11-26 22:19:23,910 | INFO     | chi2: 11.130661924094664
[2025-11-26 17:20:15] 2025-11-26 22:19:23,910 | INFO     | current chi2=11.130661924094664 (change=22.88275035178789 %)
[2025-11-26 17:20:15] 2025-11-26 22:19:23,910 | INFO     | right removable region: 1040
[2025-11-26 17:20:15] 2025-11-26 22:19:23,911 | INFO     | sum of square deviations: 349825859084.46875
[2025-11-26 17:20:15] 2025-11-26 22:19:23,951 | INFO     | sum of deviations: 1628604528924.6528
[2025-11-26 17:20:15] 2025-11-26 22:19:23,951 | INFO     | mean x: 1764163804.3621519
[2025-11-26 17:20:15] 2025-11-26 22:19:23,951 | INFO     | mean y: 2930202.422670509
[2025-11-26 17:20:15] 2025-11-26 22:19:23,951 | INFO     | intersect: -8210085179.197253
[2025-11-26 17:20:15] 2025-11-26 22:19:23,952 | INFO     | chi2: 10.68055529862088
[2025-11-26 17:20:15] 2025-11-26 22:19:23,952 | INFO     | current chi2=10.68055529862088 (change=26.00125177081284 %)
[2025-11-26 17:20:15] 2025-11-26 22:19:23,953 | INFO     | sum of square deviations: 344809317776.3501
[2025-11-26 17:20:15] 2025-11-26 22:19:23,992 | INFO     | sum of deviations: 1426709615440.3545
[2025-11-26 17:20:15] 2025-11-26 22:19:23,993 | INFO     | mean x: 1764163956.8658302
[2025-11-26 17:20:15] 2025-11-26 22:19:23,993 | INFO     | mean y: 2936331.563706564
[2025-11-26 17:20:15] 2025-11-26 22:19:23,993 | INFO     | intersect: -7296604460.15679
[2025-11-26 17:20:15] 2025-11-26 22:19:23,998 | INFO     | chi2: 9.63350515506445
[2025-11-26 17:20:15] 2025-11-26 22:19:23,998 | INFO     | current chi2=9.63350515506445 (change=9.803330578622905 %)
[2025-11-26 17:20:15] 2025-11-26 22:19:23,998 | INFO     | left removable region: 20
[2025-11-26 17:20:15] 2025-11-26 22:19:23,999 | INFO     | sum of square deviations: 329079989154.1657
[2025-11-26 17:20:15] 2025-11-26 22:19:24,021 | INFO     | sum of deviations: 1759625377011.5452
[2025-11-26 17:20:15] 2025-11-26 22:19:24,022 | INFO     | mean x: 1764164078.8794117
[2025-11-26 17:20:15] 2025-11-26 22:19:24,022 | INFO     | mean y: 2953364.711764706
[2025-11-26 17:20:15] 2025-11-26 22:19:24,022 | INFO     | intersect: -9430217854.198597
[2025-11-26 17:20:15] 2025-11-26 22:19:24,023 | INFO     | chi2: 5.358494795284366
[2025-11-26 17:20:15] 2025-11-26 22:19:24,023 | INFO     | current memory leak: 5.35 B/s (using 1020 data points, chi2=5.36)
[2025-11-26 17:20:15] 2025-11-26 22:19:24,024 | INFO     | could have reported an average CPU frequency of 2957 MHz (38 samples)
[2025-11-26 17:20:15] 2025-11-26 22:19:24,025 | INFO     | ..............................
[2025-11-26 17:20:15] 2025-11-26 22:19:24,025 | INFO     | . Timing measurements:
[2025-11-26 17:20:15] 2025-11-26 22:19:24,025 | INFO     | . get job = 0 s
[2025-11-26 17:20:15] 2025-11-26 22:19:24,025 | INFO     | . initial setup = 5 s
[2025-11-26 17:20:15] 2025-11-26 22:19:24,025 | INFO     | . payload setup = 38 s
[2025-11-26 17:20:15] 2025-11-26 22:19:24,025 | INFO     | . stage-in = 0 s
[2025-11-26 17:20:15] 2025-11-26 22:19:24,025 | INFO     | . payload execution = 63775 s
[2025-11-26 17:20:15] 2025-11-26 22:19:24,025 | INFO     | . stage-out = 5 s
[2025-11-26 17:20:15] 2025-11-26 22:19:24,025 | INFO     | . log creation = 1 s
[2025-11-26 17:20:15] 2025-11-26 22:19:24,025 | INFO     | ..............................
[2025-11-26 17:20:15] 2025-11-26 22:19:24,117 | INFO     | 
[2025-11-26 17:20:15] 2025-11-26 22:19:24,117 | INFO     | job summary report
[2025-11-26 17:20:15] 2025-11-26 22:19:24,117 | INFO     | --------------------------------------------------
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | PanDA job id: 6893860949
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | task id: 47523449
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | errors: (none)
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | pilot state: finished 
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | transexitcode: 0
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | exeerrorcode: 0
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | exeerrordiag: 
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | exitcode: 0
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | exitmsg: OK
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | cpuconsumptiontime: 237188 s
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | nevents: 1000
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | neventsw: 0
[2025-11-26 17:20:15] 2025-11-26 22:19:24,118 | INFO     | pid: 3698941
[2025-11-26 17:20:15] 2025-11-26 22:19:24,119 | INFO     | pgrp: 3698941
[2025-11-26 17:20:15] 2025-11-26 22:19:24,119 | INFO     | corecount: 8
[2025-11-26 17:20:15] 2025-11-26 22:19:24,119 | INFO     | event service: False
[2025-11-26 17:20:15] 2025-11-26 22:19:24,119 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 22: 2284371, 26: 2284661, 33: 2284689, 63818: 2340323, 63824: 2349317, 63825: 2349373, 63849: 2349619}
[2025-11-26 17:20:15] 2025-11-26 22:19:24,119 | INFO     | --------------------------------------------------
[2025-11-26 17:20:15] 2025-11-26 22:19:24,119 | INFO     | 
[2025-11-26 17:20:15] 2025-11-26 22:19:24,119 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 17:20:15] 2025-11-26 22:19:24,228 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,229 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,229 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,229 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,230 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:20:15] 2025-11-26 22:19:24,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,230 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:20:15] 2025-11-26 22:19:24,230 | INFO     | job 6893860949 has completed (purged errors)
[2025-11-26 17:20:15] 2025-11-26 22:19:24,230 | INFO     | overall cleanup function is called
[2025-11-26 17:20:15] 2025-11-26 22:19:25,305 | INFO     | --- collectZombieJob: --- 10, [3698941]
[2025-11-26 17:20:15] 2025-11-26 22:19:25,305 | INFO     | zombie collector waiting for pid 3698941
[2025-11-26 17:20:15] 2025-11-26 22:19:25,305 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:20:15] 2025-11-26 22:19:25,305 | INFO     | collected zombie processes
[2025-11-26 17:20:15] 2025-11-26 22:19:25,305 | INFO     | will attempt to kill all subprocesses of pid=3698941
[2025-11-26 17:20:15] 2025-11-26 22:19:25,950 | INFO     | process IDs to be killed: [3698941] (in reverse order)
[2025-11-26 17:20:15] 2025-11-26 22:19:26,135 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:20:15] 2025-11-26 22:19:26,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:20:15] 2025-11-26 22:19:26,159 | INFO     | did not find any defunct processes belonging to 3698941
[2025-11-26 17:20:15] 2025-11-26 22:19:26,172 | INFO     | did not find any defunct processes belonging to 3698941
[2025-11-26 17:20:15] 2025-11-26 22:19:26,175 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:20:15] 2025-11-26 22:19:26,175 | INFO     | ready for new job
[2025-11-26 17:20:15] 2025-11-26 22:19:26,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:20:15] 2025-11-26 22:19:26,181 | INFO     | ***************************************
[2025-11-26 17:20:15] 2025-11-26 22:19:26,181 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:20:15] 2025-11-26 22:19:26,182 | INFO     | ***************************************
[2025-11-26 17:20:15] 2025-11-26 22:19:26,182 | INFO     | 
[2025-11-26 17:20:15] 2025-11-26 22:19:26,185 | INFO     | architecture information:
[2025-11-26 17:20:15] 2025-11-26 22:19:26,189 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:20:15] 2025-11-26 22:19:26,241 | INFO     | cat /etc/os-release:
[2025-11-26 17:20:15] NAME="CentOS Linux"
[2025-11-26 17:20:15] VERSION="7 (Core)"
[2025-11-26 17:20:15] ID="centos"
[2025-11-26 17:20:15] ID_LIKE="rhel fedora"
[2025-11-26 17:20:15] VERSION_ID="7"
[2025-11-26 17:20:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:20:15] ANSI_COLOR="0;31"
[2025-11-26 17:20:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:20:15] HOME_URL="https://www.centos.org/"
[2025-11-26 17:20:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:20:15] 
[2025-11-26 17:20:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:20:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:20:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:20:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:20:15] 
[2025-11-26 17:20:15] 2025-11-26 22:19:26,242 | INFO     | ***************************************
[2025-11-26 17:20:15] 2025-11-26 22:19:26,745 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 17:20:15] 2025-11-26 22:19:26,793 | INFO     | sufficient remaining disk space (69316116480 B)
[2025-11-26 17:20:15] 2025-11-26 22:19:26,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:20:15] 2025-11-26 22:19:26,793 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:20:15] 2025-11-26 22:19:26,793 | INFO     | update_server=False
[2025-11-26 17:20:15] 2025-11-26 22:19:26,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:20:15] 2025-11-26 22:19:26,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:20:15] 2025-11-26 22:19:26,817 | INFO     | aborting loop
[2025-11-26 17:20:15] 2025-11-26 22:19:27,460 | INFO     | all data control threads have been joined
[2025-11-26 17:20:15] 2025-11-26 22:19:27,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:20:15] 2025-11-26 22:19:27,565 | INFO     | all job control threads have been joined
[2025-11-26 17:20:15] 2025-11-26 22:19:27,799 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:27,823 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:27,907 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:27,935 | INFO     | all payload control threads have been joined
[2025-11-26 17:20:15] 2025-11-26 22:19:27,951 | INFO     | [job] validate thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:28,280 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:28,466 | INFO     | [data] control thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:28,571 | INFO     | [job] control thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:28,759 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:28,778 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:28,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:20:15] 2025-11-26 22:19:28,941 | INFO     | [payload] control thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:29,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:20:15] 2025-11-26 22:19:29,183 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:29,281 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:29,287 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:29,505 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:30,143 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:32,913 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:20:15] 2025-11-26 22:19:56,810 | INFO     | PID=3688101 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:20:15] 2025-11-26 22:19:56,810 | INFO     | .. there are 24 such processes running
[2025-11-26 17:20:15] 2025-11-26 22:19:56,811 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:20:15] 2025-11-26 22:19:56,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:20:15] 2025-11-26 22:19:56,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:20:15] 2025-11-26 22:20:06,868 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:20:15] 2025-11-26 22:20:08,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674843850560)>', '<ExcThread(monitor, started 140674489882368)>']
[2025-11-26 17:20:15] 2025-11-26 22:20:08,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:20:15] 2025-11-26 22:20:08,907 | INFO     | [monitor] control thread has ended
[2025-11-26 17:20:15] 2025-11-26 22:20:13,717 | INFO     | all workflow threads have been joined
[2025-11-26 17:20:15] 2025-11-26 22:20:13,717 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:20:15] 2025-11-26 22:20:13,717 | INFO     | traces error code: 0
[2025-11-26 17:20:15] 2025-11-26 22:20:13,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:20:15] 2025-11-26 22:20:14,052 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:20:15] 2025-11-26 22:20:14,090 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:20:15] 2025-11-26 22:20:14,121 [wrapper] pilotpid: 3688101
[2025-11-26 17:20:15] 2025-11-26 22:20:14,153 [wrapper] Pilot exit status: 0
[2025-11-26 17:20:15] 2025-11-26 22:20:14,245 [wrapper] pandaids: 6893860949
[2025-11-26 17:20:15] 2025-11-26 22:20:14,604 [wrapper] cleanup supervisor_pilot 2255087 3688102
[2025-11-26 17:20:15] 2025-11-26 22:20:14,617 [wrapper] Test setup, not cleaning
[2025-11-26 17:20:15] 2025-11-26 22:20:14,646 [wrapper] apfmon messages muted
[2025-11-26 17:20:15] 2025-11-26 22:20:14,649 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:20:15] 2025-11-26 22:20:14,651 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:20:15]  *** Error codes and diagnostics ***
[2025-11-26 17:20:15]     "exeErrorCode": 0,
[2025-11-26 17:20:15]     "exeErrorDiag": "",
[2025-11-26 17:20:15]     "pilotErrorCode": 0,
[2025-11-26 17:20:15]     "pilotErrorDiag": "",
[2025-11-26 17:20:15]  *** Listing of results directory ***
[2025-11-26 17:20:15] total 1323560
[2025-11-26 17:20:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 08:50 pilot3.tar.gz
[2025-11-26 17:20:15] -rwx------. 1 boincer umatlas     36292 Nov 20 08:51 runpilot2-wrapper.sh
[2025-11-26 17:20:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 08:51 queuedata.json
[2025-11-26 17:20:15] -rw-r--r--. 1 boincer umatlas       100 Nov 25 23:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:20:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 23:33 run_atlas
[2025-11-26 17:20:15] -rw-r--r--. 1 boincer umatlas       105 Nov 25 23:33 job.xml
[2025-11-26 17:20:15] -rw-r--r--. 2 boincer umatlas 408955564 Nov 25 23:33 EVNT.47493127._000559.pool.root.1
[2025-11-26 17:20:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:33 start_atlas.sh
[2025-11-26 17:20:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 23:33 shared
[2025-11-26 17:20:15] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 23:33 input.tar.gz
[2025-11-26 17:20:15] -rw-r--r--. 1 boincer umatlas         0 Nov 25 23:33 boinc_lockfile
[2025-11-26 17:20:15] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 23:33 pandaJob.out
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas        57 Nov 25 23:33 setup.sh.local
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas    991877 Nov 25 23:34 agis_schedconf.cvmfs.json
[2025-11-26 17:20:15] drwx------. 5 boincer umatlas      4096 Nov 25 23:34 pilot3
[2025-11-26 17:20:15] -rw-r--r--. 1 boincer umatlas       533 Nov 26 17:01 boinc_task_state.xml
[2025-11-26 17:20:15] -rw-r--r--. 1 boincer umatlas      6844 Nov 26 17:12 init_data.xml
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas 921206162 Nov 26 17:18 HITS.47523449._005588.pool.root.1
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas      1062 Nov 26 17:18 memory_monitor_summary.json
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas   1516240 Nov 26 17:18 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas   2191234 Nov 26 17:18 log.47523449._005588.job.log.tgz.1
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas      8627 Nov 26 17:19 heartbeat.json
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas        95 Nov 26 17:19 pilot_heartbeat.json
[2025-11-26 17:20:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 17:20 boinc_mmap_file
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas      4824 Nov 26 17:20 pilotlog.txt
[2025-11-26 17:20:15] -rw-r--r--. 1 boincer umatlas        29 Nov 26 17:20 wrapper_checkpoint.txt
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas   8431948 Nov 26 17:20 log.47523449._005588.job.log.1
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas       353 Nov 26 17:20 output.list
[2025-11-26 17:20:15] -rw-r--r--. 1 boincer umatlas       620 Nov 26 17:20 runtime_log
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas  10639360 Nov 26 17:20 result.tar.gz
[2025-11-26 17:20:15] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 17:20 runtime_log.err
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas       662 Nov 26 17:20 ImsMDmKFKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2zHKDmDSVAqm.diag
[2025-11-26 17:20:15] -rw-r--r--. 1 boincer umatlas     21663 Nov 26 17:20 stderr.txt
[2025-11-26 17:20:15] HITS file was successfully produced:
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas 921206162 Nov 26 17:18 shared/HITS.pool.root.1
[2025-11-26 17:20:15]  *** Contents of shared directory: ***
[2025-11-26 17:20:15] total 1309984
[2025-11-26 17:20:15] -rw-r--r--. 2 boincer umatlas 408955564 Nov 25 23:33 ATLAS.root_0
[2025-11-26 17:20:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:33 start_atlas.sh
[2025-11-26 17:20:15] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 23:33 input.tar.gz
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas 921206162 Nov 26 17:18 HITS.pool.root.1
[2025-11-26 17:20:15] -rw-------. 1 boincer umatlas  10639360 Nov 26 17:20 result.tar.gz
17:20:16 (3683868): run_atlas exited; CPU time 238401.174073
17:20:16 (3683868): called boinc_finish(0)

</stderr_txt>
]]>

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