Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:07:47 (31046): wrapper (7.7.26015): starting
16:07:47 (31046): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 16:07:47] Arguments: --nthreads 12
[2025-11-25 16:07:47] Threads: 12
[2025-11-25 16:07:47] Checking for CVMFS
[2025-11-25 16:07:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 16:07:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 16:07:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 16:07:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 16:07:48] 2.11.2.0 2998 286715 94396 153297 0 81 16790500 20275201 1 130560 1 129147389 99.967 16877759 14512 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 16:07:48] CVMFS is ok
[2025-11-25 16:07:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 16:07:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 16:07:48] Further information can be found at the LHC@home message board.
[2025-11-25 16:07:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 16:07:48] Checking for apptainer binary...
[2025-11-25 16:07:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 16:07:48] Running /usr/bin/apptainer --version
[2025-11-25 16:07:48] apptainer version 1.3.2-1.el7
[2025-11-25 16:07:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 16:07:49] c-205-25.aglt2.org
[2025-11-25 16:07:49] apptainer works
[2025-11-25 16:07:49] Set ATHENA_PROC_NUMBER=12
[2025-11-25 16:07:49] Set ATHENA_CORE_NUMBER=12
[2025-11-25 16:07:49] Starting ATLAS job with PandaID=6895335030
[2025-11-25 16:07:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:22:52]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:22:52] 2025-11-26 04:21:56,115 | INFO     | extracted standard info from prmon json
[2025-11-25 23:22:52] 2025-11-26 04:21:56,115 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:22:52] 2025-11-26 04:21:56,115 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:22:52] 2025-11-26 04:21:56,121 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:22:52] 2025-11-26 04:21:56,122 | INFO     | sum of square deviations: 24141048480.679157
[2025-11-25 23:22:52] 2025-11-26 04:21:56,126 | INFO     | sum of deviations: 344526905716.8923
[2025-11-25 23:22:52] 2025-11-26 04:21:56,126 | INFO     | mean x: 1764117906.201405
[2025-11-25 23:22:52] 2025-11-26 04:21:56,126 | INFO     | mean y: 3414954.512880562
[2025-11-25 23:22:52] 2025-11-26 04:21:56,126 | INFO     | intersect: -25173042647.557022
[2025-11-25 23:22:52] 2025-11-26 04:21:56,127 | INFO     | chi2: 6.554903891719656
[2025-11-25 23:22:52] 2025-11-26 04:21:56,127 | INFO     | sum of square deviations: 23302910157.974
[2025-11-25 23:22:52] 2025-11-26 04:21:56,131 | INFO     | sum of deviations: 510461695570.96234
[2025-11-25 23:22:52] 2025-11-26 04:21:56,131 | INFO     | mean x: 1764117753.7037914
[2025-11-25 23:22:52] 2025-11-26 04:21:56,131 | INFO     | mean y: 3445115.0236966824
[2025-11-25 23:22:52] 2025-11-26 04:21:56,131 | INFO     | intersect: -38640420978.8568
[2025-11-25 23:22:52] 2025-11-26 04:21:56,132 | INFO     | chi2: 3.4189602023229604
[2025-11-25 23:22:52] 2025-11-26 04:21:56,132 | INFO     | current chi2=3.4189602023229604 (change=47.841184877754046 %)
[2025-11-25 23:22:52] 2025-11-26 04:21:56,133 | INFO     | sum of square deviations: 22484400110.26354
[2025-11-25 23:22:52] 2025-11-26 04:21:56,136 | INFO     | sum of deviations: 595032177861.0101
[2025-11-25 23:22:52] 2025-11-26 04:21:56,136 | INFO     | mean x: 1764117601.206235
[2025-11-25 23:22:52] 2025-11-26 04:21:56,137 | INFO     | mean y: 3460839.5347721823
[2025-11-25 23:22:52] 2025-11-26 04:21:56,137 | INFO     | intersect: -46682540703.79852
[2025-11-25 23:22:52] 2025-11-26 04:21:56,137 | INFO     | chi2: 2.422306632445287
[2025-11-25 23:22:52] 2025-11-26 04:21:56,137 | INFO     | current chi2=2.422306632445287 (change=29.150780088066313 %)
[2025-11-25 23:22:52] 2025-11-26 04:21:56,138 | INFO     | sum of square deviations: 21685285775.048557
[2025-11-25 23:22:52] 2025-11-26 04:21:56,141 | INFO     | sum of deviations: 589310261311.6703
[2025-11-25 23:22:52] 2025-11-26 04:21:56,141 | INFO     | mean x: 1764117448.7087379
[2025-11-25 23:22:52] 2025-11-26 04:21:56,142 | INFO     | mean y: 3459733.480582524
[2025-11-25 23:22:52] 2025-11-26 04:21:56,142 | INFO     | intersect: -47937458613.98332
[2025-11-25 23:22:52] 2025-11-26 04:21:56,142 | INFO     | chi2: 2.391195776573413
[2025-11-25 23:22:52] 2025-11-26 04:21:56,142 | INFO     | current chi2=2.391195776573413 (change=1.284348375022539 %)
[2025-11-25 23:22:52] 2025-11-26 04:21:56,142 | INFO     | right removable region: 411
[2025-11-25 23:22:52] 2025-11-26 04:21:56,143 | INFO     | sum of square deviations: 23302857697.973988
[2025-11-25 23:22:52] 2025-11-26 04:21:56,147 | INFO     | sum of deviations: 213073043117.86243
[2025-11-25 23:22:52] 2025-11-26 04:21:56,147 | INFO     | mean x: 1764118058.7037914
[2025-11-25 23:22:52] 2025-11-26 04:21:56,147 | INFO     | mean y: 3438785.710900474
[2025-11-25 23:22:52] 2025-11-26 04:21:56,147 | INFO     | intersect: -16127029333.650837
[2025-11-25 23:22:52] 2025-11-26 04:21:56,148 | INFO     | chi2: 4.366949360296576
[2025-11-25 23:22:52] 2025-11-26 04:21:56,148 | INFO     | current chi2=4.366949360296576 (change=33.378895672093186 %)
[2025-11-25 23:22:52] 2025-11-26 04:21:56,148 | INFO     | sum of square deviations: 22484346673.07891
[2025-11-25 23:22:52] 2025-11-26 04:21:56,152 | INFO     | sum of deviations: 179641356356.79868
[2025-11-25 23:22:52] 2025-11-26 04:21:56,152 | INFO     | mean x: 1764118211.201439
[2025-11-25 23:22:52] 2025-11-26 04:21:56,152 | INFO     | mean y: 3445011.335731415
[2025-11-25 23:22:52] 2025-11-26 04:21:56,152 | INFO     | intersect: -14091186815.94341
[2025-11-25 23:22:52] 2025-11-26 04:21:56,153 | INFO     | chi2: 4.310421815025708
[2025-11-25 23:22:52] 2025-11-26 04:21:56,153 | INFO     | current chi2=4.310421815025708 (change=1.2944401367417864 %)
[2025-11-25 23:22:52] 2025-11-26 04:21:56,153 | INFO     | left removable region: 20
[2025-11-25 23:22:52] 2025-11-26 04:21:56,153 | INFO     | sum of square deviations: 18535521307.03838
[2025-11-25 23:22:52] 2025-11-26 04:21:56,157 | INFO     | sum of deviations: 365643436460.79285
[2025-11-25 23:22:52] 2025-11-26 04:21:56,157 | INFO     | mean x: 1764118028.202046
[2025-11-25 23:22:52] 2025-11-26 04:21:56,157 | INFO     | mean y: 3503328.5089514065
[2025-11-25 23:22:52] 2025-11-26 04:21:56,157 | INFO     | intersect: -34796606550.74746
[2025-11-25 23:22:52] 2025-11-26 04:21:56,157 | INFO     | chi2: 0.06010680116669197
[2025-11-25 23:22:52] 2025-11-26 04:21:56,158 | INFO     | current memory leak: 19.73 B/s (using 391 data points, chi2=0.06)
[2025-11-25 23:22:52] 2025-11-26 04:21:56,158 | INFO     | could have reported an average CPU frequency of 2375 MHz (18 samples)
[2025-11-25 23:22:52] 2025-11-26 04:21:56,158 | INFO     | ..............................
[2025-11-25 23:22:52] 2025-11-26 04:21:56,158 | INFO     | . Timing measurements:
[2025-11-25 23:22:52] 2025-11-26 04:21:56,158 | INFO     | . get job = 0 s
[2025-11-25 23:22:52] 2025-11-26 04:21:56,158 | INFO     | . initial setup = 2 s
[2025-11-25 23:22:52] 2025-11-26 04:21:56,159 | INFO     | . payload setup = 7 s
[2025-11-25 23:22:52] 2025-11-26 04:21:56,159 | INFO     | . stage-in = 0 s
[2025-11-25 23:22:52] 2025-11-26 04:21:56,159 | INFO     | . payload execution = 25996 s
[2025-11-25 23:22:52] 2025-11-26 04:21:56,159 | INFO     | . stage-out = 3 s
[2025-11-25 23:22:52] 2025-11-26 04:21:56,159 | INFO     | . log creation = 0 s
[2025-11-25 23:22:52] 2025-11-26 04:21:56,159 | INFO     | ..............................
[2025-11-25 23:22:52] 2025-11-26 04:21:56,676 | INFO     | 
[2025-11-25 23:22:52] 2025-11-26 04:21:56,676 | INFO     | job summary report
[2025-11-25 23:22:52] 2025-11-26 04:21:56,676 | INFO     | --------------------------------------------------
[2025-11-25 23:22:52] 2025-11-26 04:21:56,676 | INFO     | PanDA job id: 6895335030
[2025-11-25 23:22:52] 2025-11-26 04:21:56,676 | INFO     | task id: 47556137
[2025-11-25 23:22:52] 2025-11-26 04:21:56,677 | INFO     | errors: (none)
[2025-11-25 23:22:52] 2025-11-26 04:21:56,677 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:22:52] 2025-11-26 04:21:56,677 | INFO     | pilot state: finished 
[2025-11-25 23:22:52] 2025-11-26 04:21:56,677 | INFO     | transexitcode: 0
[2025-11-25 23:22:52] 2025-11-26 04:21:56,677 | INFO     | exeerrorcode: 0
[2025-11-25 23:22:52] 2025-11-26 04:21:56,677 | INFO     | exeerrordiag: 
[2025-11-25 23:22:52] 2025-11-26 04:21:56,678 | INFO     | exitcode: 0
[2025-11-25 23:22:52] 2025-11-26 04:21:56,678 | INFO     | exitmsg: OK
[2025-11-25 23:22:52] 2025-11-26 04:21:56,678 | INFO     | cpuconsumptiontime: 297207 s
[2025-11-25 23:22:52] 2025-11-26 04:21:56,678 | INFO     | nevents: 1000
[2025-11-25 23:22:52] 2025-11-26 04:21:56,678 | INFO     | neventsw: 0
[2025-11-25 23:22:52] 2025-11-26 04:21:56,678 | INFO     | pid: 9751
[2025-11-25 23:22:52] 2025-11-26 04:21:56,679 | INFO     | pgrp: 9751
[2025-11-25 23:22:52] 2025-11-26 04:21:56,679 | INFO     | corecount: 12
[2025-11-25 23:22:52] 2025-11-26 04:21:56,679 | INFO     | event service: False
[2025-11-25 23:22:52] 2025-11-26 04:21:56,679 | INFO     | sizes: {0: 2284314, 5: 2284576, 11: 2284632, 26007: 2321953, 26008: 2321952, 26011: 2331186, 26016: 2331376}
[2025-11-25 23:22:52] 2025-11-26 04:21:56,679 | INFO     | --------------------------------------------------
[2025-11-25 23:22:52] 2025-11-26 04:21:56,679 | INFO     | 
[2025-11-25 23:22:52] 2025-11-26 04:21:56,680 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 23:22:52] 2025-11-26 04:21:56,706 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,706 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,707 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,707 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,709 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:22:52] 2025-11-26 04:21:56,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,709 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:22:52] 2025-11-26 04:21:56,710 | INFO     | job 6895335030 has completed (purged errors)
[2025-11-25 23:22:52] 2025-11-26 04:21:56,710 | INFO     | overall cleanup function is called
[2025-11-25 23:22:52] 2025-11-26 04:21:57,726 | INFO     | --- collectZombieJob: --- 10, [9751]
[2025-11-25 23:22:52] 2025-11-26 04:21:57,727 | INFO     | zombie collector waiting for pid 9751
[2025-11-25 23:22:52] 2025-11-26 04:21:57,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:22:52] 2025-11-26 04:21:57,733 | INFO     | collected zombie processes
[2025-11-25 23:22:52] 2025-11-26 04:21:57,733 | INFO     | will attempt to kill all subprocesses of pid=9751
[2025-11-25 23:22:52] 2025-11-26 04:21:57,829 | INFO     | process IDs to be killed: [9751] (in reverse order)
[2025-11-25 23:22:52] 2025-11-26 04:21:57,882 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:22:52] 2025-11-26 04:21:57,883 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:22:52] 2025-11-26 04:21:57,885 | INFO     | did not find any defunct processes belonging to 9751
[2025-11-25 23:22:52] 2025-11-26 04:21:57,887 | INFO     | did not find any defunct processes belonging to 9751
[2025-11-25 23:22:52] 2025-11-26 04:21:57,889 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:22:52] 2025-11-26 04:21:57,890 | INFO     | ready for new job
[2025-11-25 23:22:52] 2025-11-26 04:21:57,890 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:22:52] 2025-11-26 04:21:57,893 | INFO     | ***************************************
[2025-11-25 23:22:52] 2025-11-26 04:21:57,893 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:22:52] 2025-11-26 04:21:57,893 | INFO     | ***************************************
[2025-11-25 23:22:52] 2025-11-26 04:21:57,893 | INFO     | 
[2025-11-25 23:22:52] 2025-11-26 04:21:57,894 | INFO     | architecture information:
[2025-11-25 23:22:52] 2025-11-26 04:21:57,895 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:22:52] 2025-11-26 04:21:57,912 | INFO     | cat /etc/os-release:
[2025-11-25 23:22:52] NAME="CentOS Linux"
[2025-11-25 23:22:52] VERSION="7 (Core)"
[2025-11-25 23:22:52] ID="centos"
[2025-11-25 23:22:52] ID_LIKE="rhel fedora"
[2025-11-25 23:22:52] VERSION_ID="7"
[2025-11-25 23:22:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:22:52] ANSI_COLOR="0;31"
[2025-11-25 23:22:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:22:52] HOME_URL="https://www.centos.org/"
[2025-11-25 23:22:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:22:52] 
[2025-11-25 23:22:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:22:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:22:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:22:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:22:52] 
[2025-11-25 23:22:52] 2025-11-26 04:21:57,912 | INFO     | ***************************************
[2025-11-25 23:22:52] 2025-11-26 04:21:58,415 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 23:22:52] 2025-11-26 04:21:58,433 | INFO     | sufficient remaining disk space (28246540288 B)
[2025-11-25 23:22:52] 2025-11-26 04:21:58,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:22:52] 2025-11-26 04:21:58,434 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:22:52] 2025-11-26 04:21:58,434 | INFO     | update_server=False
[2025-11-25 23:22:52] 2025-11-26 04:21:58,434 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:22:52] 2025-11-26 04:21:58,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:22:52] 2025-11-26 04:21:58,435 | INFO     | aborting loop
[2025-11-25 23:22:52] 2025-11-26 04:21:58,469 | INFO     | all data control threads have been joined
[2025-11-25 23:22:52] 2025-11-26 04:21:59,144 | INFO     | all job control threads have been joined
[2025-11-25 23:22:52] 2025-11-26 04:21:59,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:22:52] 2025-11-26 04:21:59,439 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:21:59,440 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:21:59,455 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:21:59,475 | INFO     | [data] control thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:21:59,552 | INFO     | all payload control threads have been joined
[2025-11-25 23:22:52] 2025-11-26 04:21:59,561 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:21:59,675 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:21:59,693 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:22:00,023 | INFO     | [job] validate thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:22:00,090 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:22:00,150 | INFO     | [job] control thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:22:00,291 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:22:00,557 | INFO     | [payload] control thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:22:00,728 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:22:01,235 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:22:01,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:22:52] 2025-11-26 04:22:01,835 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:22:52] 2025-11-26 04:22:02,255 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:22:05,841 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:22:52] 2025-11-26 04:22:28,605 | INFO     | PID=2824 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 23:22:52] 2025-11-26 04:22:28,606 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:22:52] 2025-11-26 04:22:28,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:22:52] 2025-11-26 04:22:28,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:22:52] 2025-11-26 04:22:46,252 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:22:52] 2025-11-26 04:22:47,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503902725952)>', '<ExcThread(monitor, started 140502850586368)>']
[2025-11-25 23:22:52] 2025-11-26 04:22:47,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:22:52] 2025-11-26 04:22:47,700 | INFO     | [monitor] control thread has ended
[2025-11-25 23:22:52] 2025-11-26 04:22:52,283 | INFO     | all workflow threads have been joined
[2025-11-25 23:22:52] 2025-11-26 04:22:52,283 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:22:52] 2025-11-26 04:22:52,284 | INFO     | traces error code: 0
[2025-11-25 23:22:52] 2025-11-26 04:22:52,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:22:52] 2025-11-26 04:22:52,379 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:22:52] 2025-11-26 04:22:52,383 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:22:52] 2025-11-26 04:22:52,387 [wrapper] pilotpid: 2824
[2025-11-25 23:22:52] 2025-11-26 04:22:52,391 [wrapper] Pilot exit status: 0
[2025-11-25 23:22:52] 2025-11-26 04:22:52,404 [wrapper] pandaids: 6895335030
[2025-11-25 23:22:52] 2025-11-26 04:22:52,447 [wrapper] cleanup supervisor_pilot 19952 2825
[2025-11-25 23:22:52] 2025-11-26 04:22:52,451 [wrapper] Test setup, not cleaning
[2025-11-25 23:22:52] 2025-11-26 04:22:52,455 [wrapper] apfmon messages muted
[2025-11-25 23:22:52] 2025-11-26 04:22:52,459 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:22:52] 2025-11-26 04:22:52,462 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:22:52]  *** Error codes and diagnostics ***
[2025-11-25 23:22:52]     "exeErrorCode": 0,
[2025-11-25 23:22:52]     "exeErrorDiag": "",
[2025-11-25 23:22:52]     "pilotErrorCode": 0,
[2025-11-25 23:22:52]     "pilotErrorDiag": "",
[2025-11-25 23:22:52]  *** Listing of results directory ***
[2025-11-25 23:22:52] total 1312060
[2025-11-25 23:22:52] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 22:55 pilot3.tar.gz
[2025-11-25 23:22:52] -rwx------ 1 boincer umatlas     36292 Nov 21 23:06 runpilot2-wrapper.sh
[2025-11-25 23:22:52] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 23:06 queuedata.json
[2025-11-25 23:22:52] -rw-r--r-- 1 boincer umatlas       100 Nov 25 16:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:22:52] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 16:07 run_atlas
[2025-11-25 23:22:52] -rw-r--r-- 1 boincer umatlas       105 Nov 25 16:07 job.xml
[2025-11-25 23:22:52] -rw-r--r-- 2 boincer umatlas 411766144 Nov 25 16:07 EVNT.47483658._000246.pool.root.1
[2025-11-25 23:22:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 16:07 start_atlas.sh
[2025-11-25 23:22:52] drwxrwx--x 2 boincer umatlas      4096 Nov 25 16:07 shared
[2025-11-25 23:22:52] -rw-r--r-- 2 boincer umatlas    590095 Nov 25 16:07 input.tar.gz
[2025-11-25 23:22:52] -rw-r--r-- 1 boincer umatlas         0 Nov 25 16:07 boinc_lockfile
[2025-11-25 23:22:52] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 16:07 pandaJob.out
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas        57 Nov 25 16:07 setup.sh.local
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas    991893 Nov 25 16:08 agis_schedconf.cvmfs.json
[2025-11-25 23:22:52] drwx------ 5 boincer umatlas      4096 Nov 25 16:08 pilot3
[2025-11-25 23:22:52] -rw-r--r-- 1 boincer umatlas       532 Nov 25 23:10 boinc_task_state.xml
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas 916211034 Nov 25 23:21 HITS.47556137._002422.pool.root.1
[2025-11-25 23:22:52] -rw-r--r-- 1 boincer umatlas      5956 Nov 25 23:21 init_data.xml
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas      1065 Nov 25 23:21 memory_monitor_summary.json
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas   1516240 Nov 25 23:21 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas   2177230 Nov 25 23:21 log.47556137._002422.job.log.tgz.1
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas      8662 Nov 25 23:21 heartbeat.json
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas        95 Nov 25 23:22 pilot_heartbeat.json
[2025-11-25 23:22:52] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 23:22 boinc_mmap_file
[2025-11-25 23:22:52] -rw-r--r-- 1 boincer umatlas        29 Nov 25 23:22 wrapper_checkpoint.txt
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas      4745 Nov 25 23:22 pilotlog.txt
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas   3647027 Nov 25 23:22 log.47556137._002422.job.log.1
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas       353 Nov 25 23:22 output.list
[2025-11-25 23:22:52] -rw-r--r-- 1 boincer umatlas       620 Nov 25 23:22 runtime_log
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas   5847040 Nov 25 23:22 result.tar.gz
[2025-11-25 23:22:52] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 23:22 runtime_log.err
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas       670 Nov 25 23:22 mP3NDmd4tg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTvJKDmDzxB8n.diag
[2025-11-25 23:22:52] -rw-r--r-- 1 boincer umatlas     21078 Nov 25 23:22 stderr.txt
[2025-11-25 23:22:52] HITS file was successfully produced:
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas 916211034 Nov 25 23:21 shared/HITS.pool.root.1
[2025-11-25 23:22:52]  *** Contents of shared directory: ***
[2025-11-25 23:22:52] total 1303168
[2025-11-25 23:22:52] -rw-r--r-- 2 boincer umatlas 411766144 Nov 25 16:07 ATLAS.root_0
[2025-11-25 23:22:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 16:07 start_atlas.sh
[2025-11-25 23:22:52] -rw-r--r-- 2 boincer umatlas    590095 Nov 25 16:07 input.tar.gz
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas 916211034 Nov 25 23:21 HITS.pool.root.1
[2025-11-25 23:22:52] -rw------- 1 boincer umatlas   5847040 Nov 25 23:22 result.tar.gz
23:22:54 (31046): run_atlas exited; CPU time 290344.791342
23:22:54 (31046): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN