Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:12:37 (2297108): wrapper (7.7.26015): starting
20:12:37 (2297108): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 20:12:37] Arguments: --nthreads 8
[2025-11-25 20:12:37] Threads: 8
[2025-11-25 20:12:37] Checking for CVMFS
[2025-11-25 20:12:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:12:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:12:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:12:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:12:40] 2.13.3.0 9456 29374 354320 153303 2 366 30391614 32935936 22616 16776704 0 91988792 99.405 138444934 41163 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 20:12:40] CVMFS is ok
[2025-11-25 20:12:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:12:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:12:40] Further information can be found at the LHC@home message board.
[2025-11-25 20:12:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:12:40] Checking for apptainer binary...
[2025-11-25 20:12:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:12:40] Running /usr/bin/apptainer --version
[2025-11-25 20:12:40] apptainer version 1.4.4-1.el9
[2025-11-25 20:12:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:12:41] c6-5-7-2.aglt2.org
[2025-11-25 20:12:41] apptainer works
[2025-11-25 20:12:41] Set ATHENA_PROC_NUMBER=8
[2025-11-25 20:12:41] Set ATHENA_CORE_NUMBER=8
[2025-11-25 20:12:41] Starting ATLAS job with PandaID=6896297129
[2025-11-25 20:12:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:01:43]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:01:43] 2025-11-26 21:00:55,353 | INFO     | time since job start (71255s) is within the limit (172800.0s)
[2025-11-26 16:01:43] 2025-11-26 21:00:57,362 | INFO     | time since job start (71257s) is within the limit (172800.0s)
[2025-11-26 16:01:43] 2025-11-26 21:00:57,507 | INFO     | monitor loop #3826: job 0:6896297129 is in state 'finished'
[2025-11-26 16:01:43] 2025-11-26 21:00:57,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:01:43] 2025-11-26 21:00:59,381 | INFO     | time since job start (71259s) is within the limit (172800.0s)
[2025-11-26 16:01:43] 2025-11-26 21:01:00,012 | INFO     | monitor loop #3827: job 0:6896297129 is in state 'finished'
[2025-11-26 16:01:43] 2025-11-26 21:01:00,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:01:43] 2025-11-26 21:01:01,389 | INFO     | time since job start (71261s) is within the limit (172800.0s)
[2025-11-26 16:01:43] 2025-11-26 21:01:02,518 | INFO     | monitor loop #3828: job 0:6896297129 is in state 'finished'
[2025-11-26 16:01:43] 2025-11-26 21:01:02,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:01:43] 2025-11-26 21:01:03,405 | INFO     | time since job start (71263s) is within the limit (172800.0s)
[2025-11-26 16:01:43] 2025-11-26 21:01:05,025 | INFO     | monitor loop #3829: job 0:6896297129 is in state 'finished'
[2025-11-26 16:01:43] 2025-11-26 21:01:05,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:01:43] 2025-11-26 21:01:05,415 | INFO     | time since job start (71265s) is within the limit (172800.0s)
[2025-11-26 16:01:43] 2025-11-26 21:01:07,459 | INFO     | time since job start (71267s) is within the limit (172800.0s)
[2025-11-26 16:01:43] 2025-11-26 21:01:07,538 | INFO     | monitor loop #3830: job 0:6896297129 is in state 'finished'
[2025-11-26 16:01:43] 2025-11-26 21:01:07,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:01:43] 2025-11-26 21:01:08,167 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 16:01:43] 2025-11-26 21:01:08,184 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3077.0348214285723
[2025-11-26 16:01:43] 2025-11-26 21:01:08,202 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896297129/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:01:43] 2025-11-26 21:01:08,205 | INFO     | extracted standard info from prmon json
[2025-11-26 16:01:43] 2025-11-26 21:01:08,205 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:01:43] 2025-11-26 21:01:08,205 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:01:43] 2025-11-26 21:01:08,242 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:01:43] 2025-11-26 21:01:08,248 | INFO     | sum of square deviations: 491587253147.105
[2025-11-26 16:01:43] 2025-11-26 21:01:08,289 | INFO     | sum of deviations: 2138637841462.2805
[2025-11-26 16:01:43] 2025-11-26 21:01:08,289 | INFO     | mean x: 1764155245.3233275
[2025-11-26 16:01:43] 2025-11-26 21:01:08,290 | INFO     | mean y: 2955493.2246998283
[2025-11-26 16:01:43] 2025-11-26 21:01:08,290 | INFO     | intersect: -7671957030.867179
[2025-11-26 16:01:43] 2025-11-26 21:01:08,291 | INFO     | chi2: 13.28016818119377
[2025-11-26 16:01:43] 2025-11-26 21:01:08,292 | INFO     | sum of square deviations: 485292768659.32
[2025-11-26 16:01:43] 2025-11-26 21:01:08,337 | INFO     | sum of deviations: 2532766203815.322
[2025-11-26 16:01:43] 2025-11-26 21:01:08,337 | INFO     | mean x: 1764155092.8484066
[2025-11-26 16:01:43] 2025-11-26 21:01:08,337 | INFO     | mean y: 2965038.2575366064
[2025-11-26 16:01:43] 2025-11-26 21:01:08,337 | INFO     | intersect: -9204244889.471342
[2025-11-26 16:01:43] 2025-11-26 21:01:08,338 | INFO     | chi2: 10.111848775789646
[2025-11-26 16:01:43] 2025-11-26 21:01:08,339 | INFO     | current chi2=10.111848775789646 (change=23.857524710348365 %)
[2025-11-26 16:01:43] 2025-11-26 21:01:08,339 | INFO     | right removable region: 1160
[2025-11-26 16:01:43] 2025-11-26 21:01:08,340 | INFO     | sum of square deviations: 485288626759.3196
[2025-11-26 16:01:43] 2025-11-26 21:01:08,383 | INFO     | sum of deviations: 1744724640278.1453
[2025-11-26 16:01:43] 2025-11-26 21:01:08,383 | INFO     | mean x: 1764155397.8484066
[2025-11-26 16:01:43] 2025-11-26 21:01:08,383 | INFO     | mean y: 2965026.887166236
[2025-11-26 16:01:43] 2025-11-26 21:01:08,383 | INFO     | intersect: -6339580877.103977
[2025-11-26 16:01:43] 2025-11-26 21:01:08,385 | INFO     | chi2: 10.490606066262563
[2025-11-26 16:01:43] 2025-11-26 21:01:08,385 | INFO     | current chi2=10.490606066262563 (change=21.005472798767304 %)
[2025-11-26 16:01:43] 2025-11-26 21:01:08,385 | INFO     | left removable region: 10
[2025-11-26 16:01:43] 2025-11-26 21:01:08,391 | INFO     | sum of square deviations: 471626727426.00073
[2025-11-26 16:01:43] 2025-11-26 21:01:08,473 | INFO     | sum of deviations: 2127905010974.7988
[2025-11-26 16:01:43] 2025-11-26 21:01:08,473 | INFO     | mean x: 1764155367.4
[2025-11-26 16:01:43] 2025-11-26 21:01:08,477 | INFO     | mean y: 2978809.0373913045
[2025-11-26 16:01:43] 2025-11-26 21:01:08,478 | INFO     | intersect: -7956610476.575247
[2025-11-26 16:01:43] 2025-11-26 21:01:08,479 | INFO     | chi2: 6.611269337138472
[2025-11-26 16:01:43] 2025-11-26 21:01:08,479 | INFO     | current memory leak: 4.51 B/s (using 1150 data points, chi2=6.61)
[2025-11-26 16:01:43] 2025-11-26 21:01:08,480 | INFO     | could have reported an average CPU frequency of 2950 MHz (42 samples)
[2025-11-26 16:01:43] 2025-11-26 21:01:08,481 | INFO     | ..............................
[2025-11-26 16:01:43] 2025-11-26 21:01:08,481 | INFO     | . Timing measurements:
[2025-11-26 16:01:43] 2025-11-26 21:01:08,481 | INFO     | . get job = 0 s
[2025-11-26 16:01:43] 2025-11-26 21:01:08,481 | INFO     | . initial setup = 3 s
[2025-11-26 16:01:43] 2025-11-26 21:01:08,481 | INFO     | . payload setup = 27 s
[2025-11-26 16:01:43] 2025-11-26 21:01:08,481 | INFO     | . stage-in = 0 s
[2025-11-26 16:01:43] 2025-11-26 21:01:08,481 | INFO     | . payload execution = 71153 s
[2025-11-26 16:01:43] 2025-11-26 21:01:08,485 | INFO     | . stage-out = 5 s
[2025-11-26 16:01:43] 2025-11-26 21:01:08,485 | INFO     | . log creation = 1 s
[2025-11-26 16:01:43] 2025-11-26 21:01:08,486 | INFO     | ..............................
[2025-11-26 16:01:43] 2025-11-26 21:01:09,034 | INFO     | 
[2025-11-26 16:01:43] 2025-11-26 21:01:09,034 | INFO     | job summary report
[2025-11-26 16:01:43] 2025-11-26 21:01:09,034 | INFO     | --------------------------------------------------
[2025-11-26 16:01:43] 2025-11-26 21:01:09,034 | INFO     | PanDA job id: 6896297129
[2025-11-26 16:01:43] 2025-11-26 21:01:09,034 | INFO     | task id: 47556161
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | errors: (none)
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | pilot state: finished 
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | transexitcode: 0
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | exeerrorcode: 0
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | exeerrordiag: 
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | exitcode: 0
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | exitmsg: OK
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | cpuconsumptiontime: 227918 s
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | nevents: 1000
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | neventsw: 0
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | pid: 2323259
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | pgrp: 2323259
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | corecount: 8
[2025-11-26 16:01:43] 2025-11-26 21:01:09,035 | INFO     | event service: False
[2025-11-26 16:01:43] 2025-11-26 21:01:09,039 | INFO     | sizes: {0: 2284141, 1: 2284340, 12: 2284340, 22: 2284630, 23: 2284658, 71186: 2341322, 71192: 2350316, 71194: 2350372, 71220: 2350618}
[2025-11-26 16:01:43] 2025-11-26 21:01:09,049 | INFO     | --------------------------------------------------
[2025-11-26 16:01:43] 2025-11-26 21:01:09,049 | INFO     | 
[2025-11-26 16:01:43] 2025-11-26 21:01:09,049 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 16:01:43] 2025-11-26 21:01:09,134 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,135 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,136 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,136 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,137 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,137 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,137 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,138 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:01:43] 2025-11-26 21:01:09,138 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,140 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:01:43] 2025-11-26 21:01:09,141 | INFO     | job 6896297129 has completed (purged errors)
[2025-11-26 16:01:43] 2025-11-26 21:01:09,141 | INFO     | overall cleanup function is called
[2025-11-26 16:01:43] 2025-11-26 21:01:10,184 | INFO     | --- collectZombieJob: --- 10, [2323259]
[2025-11-26 16:01:43] 2025-11-26 21:01:10,185 | INFO     | zombie collector waiting for pid 2323259
[2025-11-26 16:01:43] 2025-11-26 21:01:10,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:01:43] 2025-11-26 21:01:10,185 | INFO     | collected zombie processes
[2025-11-26 16:01:43] 2025-11-26 21:01:10,185 | INFO     | will attempt to kill all subprocesses of pid=2323259
[2025-11-26 16:01:43] 2025-11-26 21:01:10,699 | INFO     | process IDs to be killed: [2323259] (in reverse order)
[2025-11-26 16:01:43] 2025-11-26 21:01:10,944 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:01:43] 2025-11-26 21:01:10,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:01:43] 2025-11-26 21:01:10,988 | INFO     | did not find any defunct processes belonging to 2323259
[2025-11-26 16:01:43] 2025-11-26 21:01:11,019 | INFO     | did not find any defunct processes belonging to 2323259
[2025-11-26 16:01:43] 2025-11-26 21:01:11,023 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:01:43] 2025-11-26 21:01:11,023 | INFO     | ready for new job
[2025-11-26 16:01:43] 2025-11-26 21:01:11,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:01:43] 2025-11-26 21:01:11,067 | INFO     | ***************************************
[2025-11-26 16:01:43] 2025-11-26 21:01:11,067 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:01:43] 2025-11-26 21:01:11,067 | INFO     | ***************************************
[2025-11-26 16:01:43] 2025-11-26 21:01:11,067 | INFO     | 
[2025-11-26 16:01:43] 2025-11-26 21:01:11,087 | INFO     | architecture information:
[2025-11-26 16:01:43] 2025-11-26 21:01:11,099 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:01:43] 2025-11-26 21:01:11,209 | INFO     | cat /etc/os-release:
[2025-11-26 16:01:43] NAME="CentOS Linux"
[2025-11-26 16:01:43] VERSION="7 (Core)"
[2025-11-26 16:01:43] ID="centos"
[2025-11-26 16:01:43] ID_LIKE="rhel fedora"
[2025-11-26 16:01:43] VERSION_ID="7"
[2025-11-26 16:01:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:01:43] ANSI_COLOR="0;31"
[2025-11-26 16:01:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:01:43] HOME_URL="https://www.centos.org/"
[2025-11-26 16:01:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:01:43] 
[2025-11-26 16:01:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:01:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:01:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:01:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:01:43] 
[2025-11-26 16:01:43] 2025-11-26 21:01:11,210 | INFO     | ***************************************
[2025-11-26 16:01:43] 2025-11-26 21:01:11,720 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 16:01:43] 2025-11-26 21:01:11,849 | INFO     | sufficient remaining disk space (70943506432 B)
[2025-11-26 16:01:43] 2025-11-26 21:01:11,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:01:43] 2025-11-26 21:01:11,850 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:01:43] 2025-11-26 21:01:11,850 | INFO     | update_server=False
[2025-11-26 16:01:43] 2025-11-26 21:01:11,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:01:43] 2025-11-26 21:01:11,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:01:43] 2025-11-26 21:01:11,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:01:43] 2025-11-26 21:01:11,863 | INFO     | aborting loop
[2025-11-26 16:01:43] 2025-11-26 21:01:12,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:01:43] 2025-11-26 21:01:12,302 | INFO     | all job control threads have been joined
[2025-11-26 16:01:43] 2025-11-26 21:01:12,795 | INFO     | all data control threads have been joined
[2025-11-26 16:01:43] 2025-11-26 21:01:12,855 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:12,868 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:13,211 | INFO     | all payload control threads have been joined
[2025-11-26 16:01:43] 2025-11-26 21:01:13,302 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:13,308 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:13,309 | INFO     | [job] control thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:13,668 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:13,798 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:13,802 | INFO     | [data] control thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:13,931 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:01:43] 2025-11-26 21:01:13,938 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:13,998 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:14,016 | INFO     | [job] validate thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:14,038 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:14,088 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:14,217 | INFO     | [payload] control thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:14,936 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:15,859 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:01:43] 2025-11-26 21:01:37,258 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:01:43] 2025-11-26 21:01:37,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099307906880)>', '<ExcThread(monitor, started 140098679076608)>']
[2025-11-26 16:01:43] 2025-11-26 21:01:41,255 | INFO     | PID=2312327 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 16:01:43] 2025-11-26 21:01:41,255 | INFO     | .. there are 31 such processes running
[2025-11-26 16:01:43] 2025-11-26 21:01:41,257 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:01:43] 2025-11-26 21:01:41,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:01:43] 2025-11-26 21:01:41,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:01:43] 2025-11-26 21:01:41,257 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:01:43] 2025-11-26 21:01:41,257 | INFO     | [monitor] control thread has ended
[2025-11-26 16:01:43] 2025-11-26 21:01:42,688 | INFO     | all workflow threads have been joined
[2025-11-26 16:01:43] 2025-11-26 21:01:42,689 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:01:43] 2025-11-26 21:01:42,689 | INFO     | traces error code: 0
[2025-11-26 16:01:43] 2025-11-26 21:01:42,689 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:01:43] 2025-11-26 21:01:42,947 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:01:43] 2025-11-26 21:01:42,967 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:01:43] 2025-11-26 21:01:42,987 [wrapper] pilotpid: 2312327
[2025-11-26 16:01:43] 2025-11-26 21:01:42,991 [wrapper] Pilot exit status: 0
[2025-11-26 16:01:43] 2025-11-26 21:01:43,079 [wrapper] pandaids: 6896297129
[2025-11-26 16:01:43] 2025-11-26 21:01:43,314 [wrapper] cleanup supervisor_pilot 2522838 2312328
[2025-11-26 16:01:43] 2025-11-26 21:01:43,332 [wrapper] Test setup, not cleaning
[2025-11-26 16:01:43] 2025-11-26 21:01:43,338 [wrapper] apfmon messages muted
[2025-11-26 16:01:43] 2025-11-26 21:01:43,341 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:01:43] 2025-11-26 21:01:43,346 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:01:43]  *** Error codes and diagnostics ***
[2025-11-26 16:01:43]     "exeErrorCode": 0,
[2025-11-26 16:01:43]     "exeErrorDiag": "",
[2025-11-26 16:01:43]     "pilotErrorCode": 0,
[2025-11-26 16:01:43]     "pilotErrorDiag": "",
[2025-11-26 16:01:43]  *** Listing of results directory ***
[2025-11-26 16:01:43] total 1322664
[2025-11-26 16:01:43] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 19:10 pilot3.tar.gz
[2025-11-26 16:01:43] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 19:41 queuedata.json
[2025-11-26 16:01:43] -rwx------. 1 boincer umatlas     36292 Nov 24 19:42 runpilot2-wrapper.sh
[2025-11-26 16:01:43] -rw-r--r--. 1 boincer umatlas       100 Nov 25 20:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:01:43] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 20:12 run_atlas
[2025-11-26 16:01:43] -rw-r--r--. 1 boincer umatlas       105 Nov 25 20:12 job.xml
[2025-11-26 16:01:43] -rw-r--r--. 2 boincer umatlas 410147052 Nov 25 20:12 EVNT.47483658._002072.pool.root.1
[2025-11-26 16:01:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:12 start_atlas.sh
[2025-11-26 16:01:43] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 20:12 shared
[2025-11-26 16:01:43] -rw-r--r--. 2 boincer umatlas    590100 Nov 25 20:12 input.tar.gz
[2025-11-26 16:01:43] -rw-r--r--. 1 boincer umatlas         0 Nov 25 20:12 boinc_lockfile
[2025-11-26 16:01:43] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 20:12 pandaJob.out
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas        57 Nov 25 20:12 setup.sh.local
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas    991877 Nov 25 20:13 agis_schedconf.cvmfs.json
[2025-11-26 16:01:43] drwx------. 5 boincer umatlas      4096 Nov 25 20:13 pilot3
[2025-11-26 16:01:43] -rw-r--r--. 1 boincer umatlas       533 Nov 26 15:39 boinc_task_state.xml
[2025-11-26 16:01:43] -rw-r--r--. 1 boincer umatlas      6844 Nov 26 15:57 init_data.xml
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas 919207836 Nov 26 15:59 HITS.47556161._000554.pool.root.1
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas      1058 Nov 26 16:00 memory_monitor_summary.json
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas   1516240 Nov 26 16:00 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas   2207992 Nov 26 16:00 log.47556161._000554.job.log.tgz.1
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas      8619 Nov 26 16:01 heartbeat.json
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas        95 Nov 26 16:01 pilot_heartbeat.json
[2025-11-26 16:01:43] -rw-r--r--. 1 boincer umatlas        29 Nov 26 16:01 wrapper_checkpoint.txt
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas      4824 Nov 26 16:01 pilotlog.txt
[2025-11-26 16:01:43] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 16:01 boinc_mmap_file
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas   8358852 Nov 26 16:01 log.47556161._000554.job.log.1
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas       353 Nov 26 16:01 output.list
[2025-11-26 16:01:43] -rw-r--r--. 1 boincer umatlas       620 Nov 26 16:01 runtime_log
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas  10588160 Nov 26 16:01 result.tar.gz
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas       660 Nov 26 16:01 TfyKDmGJwh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmH1LKDmpUDkPn.diag
[2025-11-26 16:01:43] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 16:01 runtime_log.err
[2025-11-26 16:01:43] -rw-r--r--. 1 boincer umatlas     21782 Nov 26 16:01 stderr.txt
[2025-11-26 16:01:43] HITS file was successfully produced:
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas 919207836 Nov 26 15:59 shared/HITS.pool.root.1
[2025-11-26 16:01:43]  *** Contents of shared directory: ***
[2025-11-26 16:01:43] total 1309140
[2025-11-26 16:01:43] -rw-r--r--. 2 boincer umatlas 410147052 Nov 25 20:12 ATLAS.root_0
[2025-11-26 16:01:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:12 start_atlas.sh
[2025-11-26 16:01:43] -rw-r--r--. 2 boincer umatlas    590100 Nov 25 20:12 input.tar.gz
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas 919207836 Nov 26 15:59 HITS.pool.root.1
[2025-11-26 16:01:43] -rw-------. 1 boincer umatlas  10588160 Nov 26 16:01 result.tar.gz
16:01:45 (2297108): run_atlas exited; CPU time 229802.910255
16:01:45 (2297108): called boinc_finish(0)

</stderr_txt>
]]>

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