Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:34:47 (2955622): wrapper (7.7.26015): starting
05:34:47 (2955622): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 05:34:47] Arguments: --nthreads 4
[2025-11-26 05:34:47] Threads: 4
[2025-11-26 05:34:47] Checking for CVMFS
[2025-11-26 05:34:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 05:34:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 05:34:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 05:34:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 05:34:47] 2.12.7.0 1658315 8096 96288 153309 3 81 2316678 4097025 0 130560 0 3002773 99.979 273404 18378 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-26 05:34:47] CVMFS is ok
[2025-11-26 05:34:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 05:34:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 05:34:47] Further information can be found at the LHC@home message board.
[2025-11-26 05:34:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 05:34:47] Checking for apptainer binary...
[2025-11-26 05:34:47] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-26 05:34:47] apptainer is not installed, using version from CVMFS
[2025-11-26 05:34:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 05:34:47] pckeatlas05
[2025-11-26 05:34:47] apptainer works
[2025-11-26 05:34:47] Set ATHENA_PROC_NUMBER=4
[2025-11-26 05:34:47] Set ATHENA_CORE_NUMBER=4
[2025-11-26 05:34:47] Starting ATLAS job with PandaID=6896296892
[2025-11-26 05:34:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:49:17]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:49:17] 2025-11-26 17:48:52,263 | INFO     | time since job start (47640s) is within the limit (172800.0s)
[2025-11-26 18:49:17] 2025-11-26 17:48:54,029 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 18:49:17] 2025-11-26 17:48:54,029 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3772.556
[2025-11-26 18:49:17] 2025-11-26 17:48:54,030 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6896296892/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 18:49:17] 2025-11-26 17:48:54,030 | INFO     | extracted standard info from prmon json
[2025-11-26 18:49:17] 2025-11-26 17:48:54,030 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:49:17] 2025-11-26 17:48:54,030 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:49:17] 2025-11-26 17:48:54,038 | INFO     | fitting pss+swap vs Time
[2025-11-26 18:49:17] 2025-11-26 17:48:54,038 | INFO     | sum of square deviations: 147717113830.0
[2025-11-26 18:49:17] 2025-11-26 17:48:54,046 | INFO     | sum of deviations: 544354581539.0001
[2025-11-26 18:49:17] 2025-11-26 17:48:54,046 | INFO     | mean x: 1764155501.0
[2025-11-26 18:49:17] 2025-11-26 17:48:54,046 | INFO     | mean y: 2394216.3930857875
[2025-11-26 18:49:17] 2025-11-26 17:48:54,046 | INFO     | intersect: -6498722036.269216
[2025-11-26 18:49:17] 2025-11-26 17:48:54,046 | INFO     | chi2: 2.239123266371231
[2025-11-26 18:49:17] 2025-11-26 17:48:54,047 | INFO     | sum of square deviations: 144898158650.0
[2025-11-26 18:49:17] 2025-11-26 17:48:54,054 | INFO     | sum of deviations: 624031676859.5001
[2025-11-26 18:49:17] 2025-11-26 17:48:54,054 | INFO     | mean x: 1764155348.5
[2025-11-26 18:49:17] 2025-11-26 17:48:54,054 | INFO     | mean y: 2398511.591494845
[2025-11-26 18:49:17] 2025-11-26 17:48:54,054 | INFO     | intersect: -7595274437.616207
[2025-11-26 18:49:17] 2025-11-26 17:48:54,055 | INFO     | chi2: 1.312428980265586
[2025-11-26 18:49:17] 2025-11-26 17:48:54,055 | INFO     | current chi2=1.312428980265586 (change=41.38647925388515 %)
[2025-11-26 18:49:17] 2025-11-26 17:48:54,055 | INFO     | sum of square deviations: 142115297170.0
[2025-11-26 18:49:17] 2025-11-26 17:48:54,061 | INFO     | monitor loop #3602: job 0:6896296892 is in state 'finished'
[2025-11-26 18:49:17] 2025-11-26 17:48:54,062 | INFO     | sum of deviations: 617403438911.0004
[2025-11-26 18:49:17] 2025-11-26 17:48:54,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:49:17] 2025-11-26 17:48:54,063 | INFO     | mean x: 1764155196.0
[2025-11-26 18:49:17] 2025-11-26 17:48:54,063 | INFO     | mean y: 2398148.3125810637
[2025-11-26 18:49:17] 2025-11-26 17:48:54,063 | INFO     | intersect: -7661769653.976862
[2025-11-26 18:49:17] 2025-11-26 17:48:54,063 | INFO     | chi2: 1.3111927925116933
[2025-11-26 18:49:17] 2025-11-26 17:48:54,063 | INFO     | current chi2=1.3111927925116933 (change=0.09419083032153958 %)
[2025-11-26 18:49:17] 2025-11-26 17:48:54,063 | INFO     | right removable region: 770
[2025-11-26 18:49:17] 2025-11-26 17:48:54,064 | INFO     | sum of square deviations: 144898158650.0
[2025-11-26 18:49:17] 2025-11-26 17:48:54,071 | INFO     | sum of deviations: 448618603496.0001
[2025-11-26 18:49:17] 2025-11-26 17:48:54,071 | INFO     | mean x: 1764155653.5
[2025-11-26 18:49:17] 2025-11-26 17:48:54,071 | INFO     | mean y: 2399378.157216495
[2025-11-26 18:49:17] 2025-11-26 17:48:54,071 | INFO     | intersect: -5459595812.095283
[2025-11-26 18:49:17] 2025-11-26 17:48:54,072 | INFO     | chi2: 1.0660480525715028
[2025-11-26 18:49:17] 2025-11-26 17:48:54,072 | INFO     | current chi2=1.0660480525715028 (change=52.38993455241246 %)
[2025-11-26 18:49:17] 2025-11-26 17:48:54,072 | INFO     | sum of square deviations: 142115297170.0
[2025-11-26 18:49:17] 2025-11-26 17:48:54,079 | INFO     | sum of deviations: 437522737290.0
[2025-11-26 18:49:17] 2025-11-26 17:48:54,079 | INFO     | mean x: 1764155806.0
[2025-11-26 18:49:17] 2025-11-26 17:48:54,079 | INFO     | mean y: 2399985.7600518805
[2025-11-26 18:49:17] 2025-11-26 17:48:54,079 | INFO     | intersect: -5428811802.256408
[2025-11-26 18:49:17] 2025-11-26 17:48:54,080 | INFO     | chi2: 1.0654661139625907
[2025-11-26 18:49:17] 2025-11-26 17:48:54,080 | INFO     | current chi2=1.0654661139625907 (change=0.0545884031689143 %)
[2025-11-26 18:49:17] 2025-11-26 17:48:54,080 | INFO     | left removable region: 20
[2025-11-26 18:49:17] 2025-11-26 17:48:54,080 | INFO     | sum of square deviations: 130816173687.5
[2025-11-26 18:49:17] 2025-11-26 17:48:54,087 | INFO     | sum of deviations: 497257771414.5
[2025-11-26 18:49:17] 2025-11-26 17:48:54,087 | INFO     | mean x: 1764155775.5
[2025-11-26 18:49:17] 2025-11-26 17:48:54,087 | INFO     | mean y: 2404694.1853333334
[2025-11-26 18:49:17] 2025-11-26 17:48:54,087 | INFO     | intersect: -6703495231.069649
[2025-11-26 18:49:17] 2025-11-26 17:48:54,088 | INFO     | chi2: 0.1313484677451121
[2025-11-26 18:49:17] 2025-11-26 17:48:54,088 | INFO     | current memory leak: 3.80 B/s (using 750 data points, chi2=0.13)
[2025-11-26 18:49:17] 2025-11-26 17:48:54,088 | INFO     | could have reported an average CPU frequency of 3706 MHz (30 samples)
[2025-11-26 18:49:17] 2025-11-26 17:48:54,088 | INFO     | ..............................
[2025-11-26 18:49:17] 2025-11-26 17:48:54,088 | INFO     | . Timing measurements:
[2025-11-26 18:49:17] 2025-11-26 17:48:54,088 | INFO     | . get job = 0 s
[2025-11-26 18:49:17] 2025-11-26 17:48:54,088 | INFO     | . initial setup = 0 s
[2025-11-26 18:49:17] 2025-11-26 17:48:54,088 | INFO     | . payload setup = 3 s
[2025-11-26 18:49:17] 2025-11-26 17:48:54,088 | INFO     | . stage-in = 0 s
[2025-11-26 18:49:17] 2025-11-26 17:48:54,089 | INFO     | . payload execution = 47616 s
[2025-11-26 18:49:17] 2025-11-26 17:48:54,089 | INFO     | . stage-out = 0 s
[2025-11-26 18:49:17] 2025-11-26 17:48:54,089 | INFO     | . log creation = 0 s
[2025-11-26 18:49:17] 2025-11-26 17:48:54,089 | INFO     | ..............................
[2025-11-26 18:49:17] 2025-11-26 17:48:54,268 | INFO     | time since job start (47642s) is within the limit (172800.0s)
[2025-11-26 18:49:17] 2025-11-26 17:48:54,451 | INFO     | 
[2025-11-26 18:49:17] 2025-11-26 17:48:54,451 | INFO     | job summary report
[2025-11-26 18:49:17] 2025-11-26 17:48:54,451 | INFO     | --------------------------------------------------
[2025-11-26 18:49:17] 2025-11-26 17:48:54,451 | INFO     | PanDA job id: 6896296892
[2025-11-26 18:49:17] 2025-11-26 17:48:54,451 | INFO     | task id: 47556149
[2025-11-26 18:49:17] 2025-11-26 17:48:54,451 | INFO     | errors: (none)
[2025-11-26 18:49:17] 2025-11-26 17:48:54,451 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:49:17] 2025-11-26 17:48:54,451 | INFO     | pilot state: finished 
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | transexitcode: 0
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | exeerrorcode: 0
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | exeerrordiag: 
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | exitcode: 0
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | exitmsg: OK
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | cpuconsumptiontime: 188019 s
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | nevents: 1000
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | neventsw: 0
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | pid: 2966505
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | pgrp: 2966505
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | corecount: 4
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | event service: False
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | sizes: {0: 2284315, 2: 2284577, 11: 2284605, 47623: 2332642, 47624: 2341636, 47626: 2341692, 47629: 2342066}
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | --------------------------------------------------
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | 
[2025-11-26 18:49:17] 2025-11-26 17:48:54,452 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-26 18:49:17] 2025-11-26 17:48:54,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,463 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,463 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,463 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,464 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:49:17] 2025-11-26 17:48:54,465 | INFO     | job 6896296892 has completed (purged errors)
[2025-11-26 18:49:17] 2025-11-26 17:48:54,465 | INFO     | overall cleanup function is called
[2025-11-26 18:49:17] 2025-11-26 17:48:55,473 | INFO     | --- collectZombieJob: --- 10, [2966505]
[2025-11-26 18:49:17] 2025-11-26 17:48:55,473 | INFO     | zombie collector waiting for pid 2966505
[2025-11-26 18:49:17] 2025-11-26 17:48:55,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:49:17] 2025-11-26 17:48:55,473 | INFO     | collected zombie processes
[2025-11-26 18:49:17] 2025-11-26 17:48:55,473 | INFO     | will attempt to kill all subprocesses of pid=2966505
[2025-11-26 18:49:17] 2025-11-26 17:48:55,517 | INFO     | process IDs to be killed: [2966505] (in reverse order)
[2025-11-26 18:49:17] 2025-11-26 17:48:55,536 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:49:17] 2025-11-26 17:48:55,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:49:17] 2025-11-26 17:48:55,538 | INFO     | did not find any defunct processes belonging to 2966505
[2025-11-26 18:49:17] 2025-11-26 17:48:55,539 | INFO     | did not find any defunct processes belonging to 2966505
[2025-11-26 18:49:17] 2025-11-26 17:48:55,540 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:49:17] 2025-11-26 17:48:55,540 | INFO     | ready for new job
[2025-11-26 18:49:17] 2025-11-26 17:48:55,540 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:49:17] 2025-11-26 17:48:55,541 | INFO     | ***************************************
[2025-11-26 18:49:17] 2025-11-26 17:48:55,541 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:49:17] 2025-11-26 17:48:55,542 | INFO     | ***************************************
[2025-11-26 18:49:17] 2025-11-26 17:48:55,542 | INFO     | 
[2025-11-26 18:49:17] 2025-11-26 17:48:55,542 | INFO     | architecture information:
[2025-11-26 18:49:17] 2025-11-26 17:48:55,542 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:49:17] 2025-11-26 17:48:55,548 | INFO     | cat /etc/os-release:
[2025-11-26 18:49:17] NAME="CentOS Linux"
[2025-11-26 18:49:17] VERSION="7 (Core)"
[2025-11-26 18:49:17] ID="centos"
[2025-11-26 18:49:17] ID_LIKE="rhel fedora"
[2025-11-26 18:49:17] VERSION_ID="7"
[2025-11-26 18:49:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:49:17] ANSI_COLOR="0;31"
[2025-11-26 18:49:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:49:17] HOME_URL="https://www.centos.org/"
[2025-11-26 18:49:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:49:17] 
[2025-11-26 18:49:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:49:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:49:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:49:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:49:17] 
[2025-11-26 18:49:17] 2025-11-26 17:48:55,548 | INFO     | ***************************************
[2025-11-26 18:49:17] 2025-11-26 17:48:56,051 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-26 18:49:17] 2025-11-26 17:48:56,059 | INFO     | sufficient remaining disk space (46019903488 B)
[2025-11-26 18:49:17] 2025-11-26 17:48:56,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:49:17] 2025-11-26 17:48:56,059 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:49:17] 2025-11-26 17:48:56,059 | INFO     | update_server=False
[2025-11-26 18:49:17] 2025-11-26 17:48:56,059 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:49:17] 2025-11-26 17:48:56,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:49:17] 2025-11-26 17:48:56,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:49:17] 2025-11-26 17:48:56,059 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:49:17] 2025-11-26 17:48:56,059 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 18:49:17] 2025-11-26 17:48:56,060 | INFO     | aborting loop
[2025-11-26 18:49:17] 2025-11-26 17:48:56,060 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:49:17] 2025-11-26 17:48:56,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:49:17] 2025-11-26 17:48:56,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:49:17] 2025-11-26 17:48:56,241 | INFO     | all data control threads have been joined
[2025-11-26 18:49:17] 2025-11-26 17:48:56,857 | INFO     | all payload control threads have been joined
[2025-11-26 18:49:17] 2025-11-26 17:48:57,015 | INFO     | all job control threads have been joined
[2025-11-26 18:49:17] 2025-11-26 17:48:57,063 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:57,065 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:57,065 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:57,079 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:57,113 | INFO     | [job] validate thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:57,114 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:57,246 | INFO     | [data] control thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:57,516 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:49:17] 2025-11-26 17:48:57,616 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:57,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:57,862 | INFO     | [payload] control thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:57,935 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:58,020 | INFO     | [job] control thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:58,064 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:58,258 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:48:58,402 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:49:01,522 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:49:17] 2025-11-26 17:49:10,675 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:49:17] 2025-11-26 17:49:11,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528434431808)>', '<ExcThread(monitor, started 140527756367616)>']
[2025-11-26 18:49:17] 2025-11-26 17:49:12,082 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:49:17] 2025-11-26 17:49:12,082 | INFO     | [monitor] control thread has ended
[2025-11-26 18:49:17] 2025-11-26 17:49:16,903 | INFO     | all workflow threads have been joined
[2025-11-26 18:49:17] 2025-11-26 17:49:16,904 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:49:17] 2025-11-26 17:49:16,904 | INFO     | traces error code: 0
[2025-11-26 18:49:17] 2025-11-26 17:49:16,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:49:17] 2025-11-26 17:49:16,962 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:49:17] 2025-11-26 17:49:16,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:49:17] 2025-11-26 17:49:16,965 [wrapper] pilotpid: 2959291
[2025-11-26 18:49:17] 2025-11-26 17:49:16,966 [wrapper] Pilot exit status: 0
[2025-11-26 18:49:17] 2025-11-26 17:49:16,970 [wrapper] pandaids: 6896296892
[2025-11-26 18:49:17] 2025-11-26 17:49:16,980 [wrapper] cleanup supervisor_pilot 3077642 2959292
[2025-11-26 18:49:17] 2025-11-26 17:49:16,982 [wrapper] Test setup, not cleaning
[2025-11-26 18:49:17] 2025-11-26 17:49:16,983 [wrapper] apfmon messages muted
[2025-11-26 18:49:17] 2025-11-26 17:49:16,984 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:49:17] 2025-11-26 17:49:16,985 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:49:17]  *** Error codes and diagnostics ***
[2025-11-26 18:49:17]     "exeErrorCode": 0,
[2025-11-26 18:49:17]     "exeErrorDiag": "",
[2025-11-26 18:49:17]     "pilotErrorCode": 0,
[2025-11-26 18:49:17]     "pilotErrorDiag": "",
[2025-11-26 18:49:17]  *** Listing of results directory ***
[2025-11-26 18:49:17] total 1311612
[2025-11-26 18:49:17] -rw-r--r-- 1 boinc boinc    576529 Nov 25 01:10 pilot3.tar.gz
[2025-11-26 18:49:17] -rw-r--r-- 1 boinc boinc      5112 Nov 25 01:35 queuedata.json
[2025-11-26 18:49:17] -rwx------ 1 boinc boinc     36292 Nov 25 01:39 runpilot2-wrapper.sh
[2025-11-26 18:49:17] -rw-r--r-- 1 boinc boinc       100 Nov 26 05:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:49:17] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 05:34 run_atlas
[2025-11-26 18:49:17] -rw-r--r-- 1 boinc boinc       105 Nov 26 05:34 job.xml
[2025-11-26 18:49:17] -rw-r--r-- 2 boinc boinc 408624158 Nov 26 05:34 EVNT.47483658._001456.pool.root.1
[2025-11-26 18:49:17] -rw-r--r-- 2 boinc boinc     15847 Nov 26 05:34 start_atlas.sh
[2025-11-26 18:49:17] drwxrwx--x 2 boinc boinc        68 Nov 26 05:34 shared
[2025-11-26 18:49:17] -rw-r--r-- 2 boinc boinc    590103 Nov 26 05:34 input.tar.gz
[2025-11-26 18:49:17] -rw-r--r-- 1 boinc boinc      6313 Nov 26 05:34 init_data.xml
[2025-11-26 18:49:17] -rw-r--r-- 1 boinc boinc         0 Nov 26 05:34 boinc_lockfile
[2025-11-26 18:49:17] -rw-r--r-- 1 boinc boinc      2786 Nov 26 05:34 pandaJob.out
[2025-11-26 18:49:17] -rw------- 1 boinc boinc    991877 Nov 26 05:34 agis_schedconf.cvmfs.json
[2025-11-26 18:49:17] drwx------ 5 boinc boinc      4096 Nov 26 05:34 pilot3
[2025-11-26 18:49:17] -rw-r--r-- 1 boinc boinc       533 Nov 26 18:44 boinc_task_state.xml
[2025-11-26 18:49:17] -rw------- 1 boinc boinc        95 Nov 26 18:48 pilot_heartbeat.json
[2025-11-26 18:49:17] -rw------- 1 boinc boinc 914196150 Nov 26 18:48 HITS.47556149._004427.pool.root.1
[2025-11-26 18:49:17] -rw------- 1 boinc boinc      1025 Nov 26 18:48 memory_monitor_summary.json
[2025-11-26 18:49:17] -rw------- 1 boinc boinc   1516240 Nov 26 18:48 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:49:17] -rw------- 1 boinc boinc   1517824 Nov 26 18:48 log.47556149._004427.job.log.tgz.1
[2025-11-26 18:49:17] -rw------- 1 boinc boinc      8592 Nov 26 18:48 heartbeat.json
[2025-11-26 18:49:17] -rw-r--r-- 1 boinc boinc      8192 Nov 26 18:49 boinc_mmap_file
[2025-11-26 18:49:17] -rw-r--r-- 1 boinc boinc        29 Nov 26 18:49 wrapper_checkpoint.txt
[2025-11-26 18:49:17] -rw------- 1 boinc boinc      4552 Nov 26 18:49 pilotlog.txt
[2025-11-26 18:49:17] -rw------- 1 boinc boinc   6667005 Nov 26 18:49 log.47556149._004427.job.log.1
[2025-11-26 18:49:17] -rw------- 1 boinc boinc       353 Nov 26 18:49 output.list
[2025-11-26 18:49:17] -rw-r--r-- 1 boinc boinc       620 Nov 26 18:49 runtime_log
[2025-11-26 18:49:17] -rw------- 1 boinc boinc   8202240 Nov 26 18:49 result.tar.gz
[2025-11-26 18:49:17] -rw------- 1 boinc boinc       658 Nov 26 18:49 wtsLDmkGwh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmq0LKDm4whhHm.diag
[2025-11-26 18:49:17] -rw-r--r-- 1 boinc boinc      8831 Nov 26 18:49 runtime_log.err
[2025-11-26 18:49:17] -rw-r--r-- 1 boinc boinc     21281 Nov 26 18:49 stderr.txt
[2025-11-26 18:49:17] HITS file was successfully produced:
[2025-11-26 18:49:17] -rw------- 1 boinc boinc 914196150 Nov 26 18:48 shared/HITS.pool.root.1
[2025-11-26 18:49:17]  *** Contents of shared directory: ***
[2025-11-26 18:49:17] total 1300428
[2025-11-26 18:49:17] -rw-r--r-- 2 boinc boinc 408624158 Nov 26 05:34 ATLAS.root_0
[2025-11-26 18:49:17] -rw-r--r-- 2 boinc boinc     15847 Nov 26 05:34 start_atlas.sh
[2025-11-26 18:49:17] -rw-r--r-- 2 boinc boinc    590103 Nov 26 05:34 input.tar.gz
[2025-11-26 18:49:17] -rw------- 1 boinc boinc 914196150 Nov 26 18:48 HITS.pool.root.1
[2025-11-26 18:49:17] -rw------- 1 boinc boinc   8202240 Nov 26 18:49 result.tar.gz
18:49:18 (2955622): run_atlas exited; CPU time 188175.337181
18:49:18 (2955622): called boinc_finish(0)

</stderr_txt>
]]>

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