Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:09:18 (1621400): wrapper (7.7.26015): starting
22:09:18 (1621400): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 22:09:18] Arguments: --nthreads 3
[2025-11-25 22:09:18] Threads: 3
[2025-11-25 22:09:18] Checking for CVMFS
[2025-11-25 22:09:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:09:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:09:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:09:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:09:18] 2.9.2.0 1308651 67 61296 153297 1 88 35355979 36864001 0 130560 0 939093 99.998 4061 3813 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 22:09:18] CVMFS is ok
[2025-11-25 22:09:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:09:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:09:18] Further information can be found at the LHC@home message board.
[2025-11-25 22:09:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:09:18] Checking for apptainer binary...
[2025-11-25 22:09:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:09:18] Running /usr/bin/apptainer --version
[2025-11-25 22:09:18] apptainer version 1.4.1-1.1
[2025-11-25 22:09:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:09:18] thA335
[2025-11-25 22:09:18] apptainer works
[2025-11-25 22:09:18] Set ATHENA_PROC_NUMBER=3
[2025-11-25 22:09:18] Set ATHENA_CORE_NUMBER=3
[2025-11-25 22:09:18] Starting ATLAS job with PandaID=6896296877
[2025-11-25 22:09:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:13:36]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:13:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:13:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:13:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:13:36] 
[2025-11-25 22:13:36] 2025-11-25 21:12:47,425 | INFO     | ***************************************
[2025-11-25 22:13:36] 2025-11-25 21:12:47,928 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 22:13:36] 2025-11-25 21:12:47,942 | INFO     | sufficient remaining disk space (826665861120 B)
[2025-11-25 22:13:36] 2025-11-25 21:12:47,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:13:36] 2025-11-25 21:12:47,942 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:13:36] 2025-11-25 21:12:47,942 | INFO     | update_server=False
[2025-11-25 22:13:36] 2025-11-25 21:12:47,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:13:36] 2025-11-25 21:12:47,943 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:13:36] 2025-11-25 21:12:47,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:13:36] 2025-11-25 21:12:47,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:13:36] 2025-11-25 21:12:47,991 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 22:13:36] 2025-11-25 21:12:47,991 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 22:13:36] 2025-11-25 21:12:47,991 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:13:36] 2025-11-25 21:12:47,991 | INFO     | will abort loop
[2025-11-25 22:13:36] 2025-11-25 21:12:48,574 | INFO     | all data control threads have been joined
[2025-11-25 22:13:36] 2025-11-25 21:12:48,639 | INFO     | all payload control threads have been joined
[2025-11-25 22:13:36] 2025-11-25 21:12:48,948 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:48,949 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:48,997 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:49,211 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:49,246 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:49,410 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:49,580 | INFO     | [data] control thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:49,582 | INFO     | all job control threads have been joined
[2025-11-25 22:13:36] 2025-11-25 21:12:49,586 | INFO     | [job] validate thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:49,645 | INFO     | [payload] control thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:49,662 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:49,719 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:49,949 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:49,972 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:50,426 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:50,587 | INFO     | [job] control thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:12:51,950 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:13:36] 2025-11-25 21:13:18,708 | INFO     | PID=1625135 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 22:13:36] 2025-11-25 21:13:18,708 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:13:36] 2025-11-25 21:13:18,708 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:13:36] 2025-11-25 21:13:18,708 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:13:36] 2025-11-25 21:13:29,883 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:13:36] 2025-11-25 21:13:31,505 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723472631616)>', '<ExcThread(monitor, started 139722827474688)>']
[2025-11-25 22:13:36] 2025-11-25 21:13:31,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:13:36] 2025-11-25 21:13:31,779 | INFO     | [monitor] control thread has ended
[2025-11-25 22:13:36] 2025-11-25 21:13:36,531 | INFO     | all workflow threads have been joined
[2025-11-25 22:13:36] 2025-11-25 21:13:36,531 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:13:36] 2025-11-25 21:13:36,532 | INFO     | traces error code: 0
[2025-11-25 22:13:36] 2025-11-25 21:13:36,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:13:36] 2025-11-25 21:13:36,579 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:13:36] 2025-11-25 21:13:36,582 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:13:36] 2025-11-25 21:13:36,585 [wrapper] pilotpid: 1625135
[2025-11-25 22:13:36] 2025-11-25 21:13:36,587 [wrapper] Pilot exit status: 0
[2025-11-25 22:13:36] 2025-11-25 21:13:36,594 [wrapper] pandaids: 6896296877
[2025-11-25 22:13:36] 2025-11-25 21:13:36,612 [wrapper] cleanup supervisor_pilot 1625141 1625136
[2025-11-25 22:13:36] 2025-11-25 21:13:36,615 [wrapper] Test setup, not cleaning
[2025-11-25 22:13:36] 2025-11-25 21:13:36,618 [wrapper] apfmon messages muted
[2025-11-25 22:13:36] 2025-11-25 21:13:36,620 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:13:36] 2025-11-25 21:13:36,623 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:13:36]  *** Error codes and diagnostics ***
[2025-11-25 22:13:36]     "exeErrorCode": 65,
[2025-11-25 22:13:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 22:13:36]     "pilotErrorCode": 1305,
[2025-11-25 22:13:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 22:13:36]  *** Listing of results directory ***
[2025-11-25 22:13:36] total 404944
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc    576529 Nov 25 01:10 pilot3.tar.gz
[2025-11-25 22:13:36] -rwx------ 1 boinc boinc     36292 Nov 25 01:35 runpilot2-wrapper.sh
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc      5112 Nov 25 01:35 queuedata.json
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc       100 Nov 25 22:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:13:36] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 22:09 run_atlas
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc       105 Nov 25 22:09 job.xml
[2025-11-25 22:13:36] -rw-r--r-- 2 boinc boinc 410470360 Nov 25 22:09 EVNT.47483658._001455.pool.root.1
[2025-11-25 22:13:36] drwxrwx--x 2 boinc boinc      4096 Nov 25 22:09 shared
[2025-11-25 22:13:36] -rw-r--r-- 2 boinc boinc    590106 Nov 25 22:09 input.tar.gz
[2025-11-25 22:13:36] -rw-r--r-- 2 boinc boinc     15847 Nov 25 22:09 start_atlas.sh
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc         0 Nov 25 22:09 boinc_setup_complete
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc      6196 Nov 25 22:09 init_data.xml
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc         0 Nov 25 22:09 boinc_lockfile
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc      2786 Nov 25 22:09 pandaJob.out
[2025-11-25 22:13:36] -rw------- 1 boinc boinc    991893 Nov 25 22:09 agis_schedconf.cvmfs.json
[2025-11-25 22:13:36] -rw------- 1 boinc boinc   1516240 Nov 25 22:09 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:13:36] drwx------ 5 boinc boinc      4096 Nov 25 22:09 pilot3
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc       524 Nov 25 22:10 boinc_task_state.xml
[2025-11-25 22:13:36] -rw------- 1 boinc boinc       979 Nov 25 22:10 memory_monitor_summary.json
[2025-11-25 22:13:36] -rw------- 1 boinc boinc     55932 Nov 25 22:10 log.47556149._004414.job.log.tgz.1
[2025-11-25 22:13:36] -rw------- 1 boinc boinc        95 Nov 25 22:12 pilot_heartbeat.json
[2025-11-25 22:13:36] -rw------- 1 boinc boinc      8396 Nov 25 22:12 heartbeat.json
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc        23 Nov 25 22:13 wrapper_checkpoint.txt
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc      8192 Nov 25 22:13 boinc_mmap_file
[2025-11-25 22:13:36] -rw------- 1 boinc boinc      4938 Nov 25 22:13 pilotlog.txt
[2025-11-25 22:13:36] -rw------- 1 boinc boinc     92941 Nov 25 22:13 log.47556149._004414.job.log.1
[2025-11-25 22:13:36] -rw------- 1 boinc boinc       186 Nov 25 22:13 output.list
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc       620 Nov 25 22:13 runtime_log
[2025-11-25 22:13:36] -rw------- 1 boinc boinc    163840 Nov 25 22:13 result.tar.gz
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc      8744 Nov 25 22:13 runtime_log.err
[2025-11-25 22:13:36] -rw------- 1 boinc boinc       649 Nov 25 22:13 IicMDmADwh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmi0LKDmLzxPUo.diag
[2025-11-25 22:13:36] -rw-r--r-- 1 boinc boinc      8755 Nov 25 22:13 stderr.txt
[2025-11-25 22:13:36] No HITS result produced
[2025-11-25 22:13:36]  *** Contents of shared directory: ***
[2025-11-25 22:13:36] total 401612
[2025-11-25 22:13:36] -rw-r--r-- 2 boinc boinc 410470360 Nov 25 22:09 ATLAS.root_0
[2025-11-25 22:13:36] -rw-r--r-- 2 boinc boinc    590106 Nov 25 22:09 input.tar.gz
[2025-11-25 22:13:36] -rw-r--r-- 2 boinc boinc     15847 Nov 25 22:09 start_atlas.sh
[2025-11-25 22:13:36] -rw------- 1 boinc boinc    163840 Nov 25 22:13 result.tar.gz
22:13:38 (1621400): run_atlas exited; CPU time 30.694663
22:13:38 (1621400): called boinc_finish(0)

</stderr_txt>
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