Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:24:43 (1727962): wrapper (7.7.26015): starting
07:24:43 (1727962): wrapper: running run_atlas (--nthreads 6)
[2025-11-26 07:24:43] Arguments: --nthreads 6
[2025-11-26 07:24:43] Threads: 6
[2025-11-26 07:24:43] Checking for CVMFS
[2025-11-26 07:24:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 07:25:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 07:25:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 07:25:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 07:25:07] 2.13.3.0 1560231 770 60328 153300 3 49 18720965 20971520 916 130560 0 584600 99.984 36977 19 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-26 07:25:07] CVMFS is ok
[2025-11-26 07:25:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 07:25:07] Checking for apptainer binary...
[2025-11-26 07:25:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 07:25:07] Running /usr/bin/apptainer --version
[2025-11-26 07:25:07] apptainer version 1.4.4-1.el9
[2025-11-26 07:25:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 07:25:08] testio005
[2025-11-26 07:25:08] apptainer works
[2025-11-26 07:25:08] Set ATHENA_PROC_NUMBER=6
[2025-11-26 07:25:08] Set ATHENA_CORE_NUMBER=6
[2025-11-26 07:25:08] Starting ATLAS job with PandaID=6896296869
[2025-11-26 07:25:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:30:06]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:30:06] 2025-11-26 09:29:30,452 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:30:06] 2025-11-26 09:29:30,452 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:30:06] 2025-11-26 09:29:30,462 | INFO     | fitting pss+swap vs Time
[2025-11-26 18:30:06] 2025-11-26 09:29:30,463 | INFO     | sum of square deviations: 85156604374.4625
[2025-11-26 18:30:06] 2025-11-26 09:29:30,472 | INFO     | sum of deviations: 676336119130.846
[2025-11-26 18:30:06] 2025-11-26 09:29:30,472 | INFO     | mean x: 1764129434.5076923
[2025-11-26 18:30:06] 2025-11-26 09:29:30,472 | INFO     | mean y: 2661889.030769231
[2025-11-26 18:30:06] 2025-11-26 09:29:30,472 | INFO     | intersect: -14008517445.137669
[2025-11-26 18:30:06] 2025-11-26 09:29:30,473 | INFO     | chi2: 8.917117876752027
[2025-11-26 18:30:06] 2025-11-26 09:29:30,474 | INFO     | sum of square deviations: 83206532126.96149
[2025-11-26 18:30:06] 2025-11-26 09:29:30,482 | INFO     | sum of deviations: 860022258617.6746
[2025-11-26 18:30:06] 2025-11-26 09:29:30,482 | INFO     | mean x: 1764129282.007752
[2025-11-26 18:30:06] 2025-11-26 09:29:30,482 | INFO     | mean y: 2676256.865116279
[2025-11-26 18:30:06] 2025-11-26 09:29:30,483 | INFO     | intersect: -18231354303.27004
[2025-11-26 18:30:06] 2025-11-26 09:29:30,483 | INFO     | chi2: 6.2922750060672215
[2025-11-26 18:30:06] 2025-11-26 09:29:30,483 | INFO     | current chi2=6.2922750060672215 (change=29.436000588576704 %)
[2025-11-26 18:30:06] 2025-11-26 09:29:30,484 | INFO     | sum of square deviations: 81286304021.9987
[2025-11-26 18:30:06] 2025-11-26 09:29:30,493 | INFO     | sum of deviations: 965780938133.0536
[2025-11-26 18:30:06] 2025-11-26 09:29:30,493 | INFO     | mean x: 1764129129.5015626
[2025-11-26 18:30:06] 2025-11-26 09:29:30,493 | INFO     | mean y: 2684625.946875
[2025-11-26 18:30:06] 2025-11-26 09:29:30,493 | INFO     | intersect: -20957332023.558716
[2025-11-26 18:30:06] 2025-11-26 09:29:30,494 | INFO     | chi2: 4.77260757077841
[2025-11-26 18:30:06] 2025-11-26 09:29:30,494 | INFO     | current chi2=4.77260757077841 (change=24.15131941664179 %)
[2025-11-26 18:30:06] 2025-11-26 09:29:30,494 | INFO     | right removable region: 639
[2025-11-26 18:30:06] 2025-11-26 09:29:30,495 | INFO     | sum of square deviations: 83206529076.96149
[2025-11-26 18:30:06] 2025-11-26 09:29:30,504 | INFO     | sum of deviations: 479928448252.33386
[2025-11-26 18:30:06] 2025-11-26 09:29:30,504 | INFO     | mean x: 1764129587.007752
[2025-11-26 18:30:06] 2025-11-26 09:29:30,504 | INFO     | mean y: 2677239.7333333334
[2025-11-26 18:30:06] 2025-11-26 09:29:30,505 | INFO     | intersect: -10172677802.724339
[2025-11-26 18:30:06] 2025-11-26 09:29:30,505 | INFO     | chi2: 6.119045633957688
[2025-11-26 18:30:06] 2025-11-26 09:29:30,505 | INFO     | current chi2=6.119045633957688 (change=31.37866159747918 %)
[2025-11-26 18:30:06] 2025-11-26 09:29:30,506 | INFO     | sum of square deviations: 81286454341.96094
[2025-11-26 18:30:06] 2025-11-26 09:29:30,515 | INFO     | sum of deviations: 324583310959.3125
[2025-11-26 18:30:06] 2025-11-26 09:29:30,515 | INFO     | mean x: 1764129739.5078125
[2025-11-26 18:30:06] 2025-11-26 09:29:30,515 | INFO     | mean y: 2689573.5375
[2025-11-26 18:30:06] 2025-11-26 09:29:30,515 | INFO     | intersect: -7041621516.750139
[2025-11-26 18:30:06] 2025-11-26 09:29:30,516 | INFO     | chi2: 4.488436844238707
[2025-11-26 18:30:06] 2025-11-26 09:29:30,516 | INFO     | current chi2=4.488436844238707 (change=26.648090033352688 %)
[2025-11-26 18:30:06] 2025-11-26 09:29:30,517 | INFO     | sum of square deviations: 79396147606.9609
[2025-11-26 18:30:06] 2025-11-26 09:29:30,526 | INFO     | sum of deviations: 278810960562.94507
[2025-11-26 18:30:06] 2025-11-26 09:29:30,526 | INFO     | mean x: 1764129892.007874
[2025-11-26 18:30:06] 2025-11-26 09:29:30,526 | INFO     | mean y: 2693257.211023622
[2025-11-26 18:30:06] 2025-11-26 09:29:30,526 | INFO     | intersect: -6192301897.760414
[2025-11-26 18:30:06] 2025-11-26 09:29:30,527 | INFO     | chi2: 4.314978201419895
[2025-11-26 18:30:06] 2025-11-26 09:29:30,527 | INFO     | current chi2=4.314978201419895 (change=3.8645668600965313 %)
[2025-11-26 18:30:06] 2025-11-26 09:29:30,527 | INFO     | left removable region: 30
[2025-11-26 18:30:06] 2025-11-26 09:29:30,528 | INFO     | sum of square deviations: 70037272732.9983
[2025-11-26 18:30:06] 2025-11-26 09:29:30,536 | INFO     | sum of deviations: 520139838447.04425
[2025-11-26 18:30:06] 2025-11-26 09:29:30,537 | INFO     | mean x: 1764130014.001642
[2025-11-26 18:30:06] 2025-11-26 09:29:30,537 | INFO     | mean y: 2720806.9556650245
[2025-11-26 18:30:06] 2025-11-26 09:29:30,537 | INFO     | intersect: -13098793068.09944
[2025-11-26 18:30:06] 2025-11-26 09:29:30,538 | INFO     | chi2: 0.10829588836736107
[2025-11-26 18:30:06] 2025-11-26 09:29:30,538 | INFO     | current memory leak: 7.43 B/s (using 609 data points, chi2=0.11)
[2025-11-26 18:30:06] 2025-11-26 09:29:30,539 | INFO     | could have reported an average CPU frequency of 3285 MHz (24 samples)
[2025-11-26 18:30:06] 2025-11-26 09:29:30,539 | INFO     | ..............................
[2025-11-26 18:30:06] 2025-11-26 09:29:30,539 | INFO     | . Timing measurements:
[2025-11-26 18:30:06] 2025-11-26 09:29:30,539 | INFO     | . get job = 0 s
[2025-11-26 18:30:06] 2025-11-26 09:29:30,539 | INFO     | . initial setup = 6 s
[2025-11-26 18:30:06] 2025-11-26 09:29:30,539 | INFO     | . payload setup = 6 s
[2025-11-26 18:30:06] 2025-11-26 09:29:30,539 | INFO     | . stage-in = 0 s
[2025-11-26 18:30:06] 2025-11-26 09:29:30,540 | INFO     | . payload execution = 39646 s
[2025-11-26 18:30:06] 2025-11-26 09:29:30,540 | INFO     | . stage-out = 5 s
[2025-11-26 18:30:06] 2025-11-26 09:29:30,540 | INFO     | . log creation = 0 s
[2025-11-26 18:30:06] 2025-11-26 09:29:30,540 | INFO     | ..............................
[2025-11-26 18:30:06] 2025-11-26 09:29:31,007 | INFO     | 
[2025-11-26 18:30:06] 2025-11-26 09:29:31,007 | INFO     | job summary report
[2025-11-26 18:30:06] 2025-11-26 09:29:31,007 | INFO     | --------------------------------------------------
[2025-11-26 18:30:06] 2025-11-26 09:29:31,007 | INFO     | PanDA job id: 6896296869
[2025-11-26 18:30:06] 2025-11-26 09:29:31,007 | INFO     | task id: 47556149
[2025-11-26 18:30:06] 2025-11-26 09:29:31,007 | INFO     | errors: (none)
[2025-11-26 18:30:06] 2025-11-26 09:29:31,008 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:30:06] 2025-11-26 09:29:31,008 | INFO     | pilot state: finished 
[2025-11-26 18:30:06] 2025-11-26 09:29:31,008 | INFO     | transexitcode: 0
[2025-11-26 18:30:06] 2025-11-26 09:29:31,008 | INFO     | exeerrorcode: 0
[2025-11-26 18:30:06] 2025-11-26 09:29:31,008 | INFO     | exeerrordiag: 
[2025-11-26 18:30:06] 2025-11-26 09:29:31,008 | INFO     | exitcode: 0
[2025-11-26 18:30:06] 2025-11-26 09:29:31,008 | INFO     | exitmsg: OK
[2025-11-26 18:30:06] 2025-11-26 09:29:31,008 | INFO     | cpuconsumptiontime: 222986 s
[2025-11-26 18:30:06] 2025-11-26 09:29:31,008 | INFO     | nevents: 1000
[2025-11-26 18:30:06] 2025-11-26 09:29:31,008 | INFO     | neventsw: 0
[2025-11-26 18:30:06] 2025-11-26 09:29:31,008 | INFO     | pid: 1738809
[2025-11-26 18:30:06] 2025-11-26 09:29:31,009 | INFO     | pgrp: 1738809
[2025-11-26 18:30:06] 2025-11-26 09:29:31,009 | INFO     | corecount: 6
[2025-11-26 18:30:06] 2025-11-26 09:29:31,009 | INFO     | event service: False
[2025-11-26 18:30:06] 2025-11-26 09:29:31,009 | INFO     | sizes: {0: 2284315, 5: 2284577, 11: 2284633, 39656: 2327562, 39662: 2336584, 39664: 2336640, 39741: 2337014}
[2025-11-26 18:30:06] 2025-11-26 09:29:31,009 | INFO     | --------------------------------------------------
[2025-11-26 18:30:06] 2025-11-26 09:29:31,009 | INFO     | 
[2025-11-26 18:30:06] 2025-11-26 09:29:31,009 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-26 18:30:06] 2025-11-26 09:29:31,027 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,027 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,027 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:30:06] 2025-11-26 09:29:31,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:30:06] 2025-11-26 09:29:31,029 | INFO     | job 6896296869 has completed (purged errors)
[2025-11-26 18:30:06] 2025-11-26 09:29:31,029 | INFO     | overall cleanup function is called
[2025-11-26 18:30:06] 2025-11-26 09:29:32,044 | INFO     | --- collectZombieJob: --- 10, [1738809]
[2025-11-26 18:30:06] 2025-11-26 09:29:32,044 | INFO     | zombie collector waiting for pid 1738809
[2025-11-26 18:30:06] 2025-11-26 09:29:32,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:30:06] 2025-11-26 09:29:32,044 | INFO     | collected zombie processes
[2025-11-26 18:30:06] 2025-11-26 09:29:32,044 | INFO     | will attempt to kill all subprocesses of pid=1738809
[2025-11-26 18:30:06] 2025-11-26 09:29:32,152 | INFO     | process IDs to be killed: [1738809] (in reverse order)
[2025-11-26 18:30:06] 2025-11-26 09:29:32,198 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:30:06] 2025-11-26 09:29:32,199 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:30:06] 2025-11-26 09:29:32,202 | INFO     | did not find any defunct processes belonging to 1738809
[2025-11-26 18:30:06] 2025-11-26 09:29:32,205 | INFO     | did not find any defunct processes belonging to 1738809
[2025-11-26 18:30:06] 2025-11-26 09:29:32,207 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:30:06] 2025-11-26 09:29:32,207 | INFO     | ready for new job
[2025-11-26 18:30:06] 2025-11-26 09:29:32,207 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:30:06] 2025-11-26 09:29:32,210 | INFO     | ***************************************
[2025-11-26 18:30:06] 2025-11-26 09:29:32,210 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:30:06] 2025-11-26 09:29:32,210 | INFO     | ***************************************
[2025-11-26 18:30:06] 2025-11-26 09:29:32,210 | INFO     | 
[2025-11-26 18:30:06] 2025-11-26 09:29:32,211 | INFO     | architecture information:
[2025-11-26 18:30:06] 2025-11-26 09:29:32,211 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:30:06] 2025-11-26 09:29:32,225 | INFO     | cat /etc/os-release:
[2025-11-26 18:30:06] NAME="CentOS Linux"
[2025-11-26 18:30:06] VERSION="7 (Core)"
[2025-11-26 18:30:06] ID="centos"
[2025-11-26 18:30:06] ID_LIKE="rhel fedora"
[2025-11-26 18:30:06] VERSION_ID="7"
[2025-11-26 18:30:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:30:06] ANSI_COLOR="0;31"
[2025-11-26 18:30:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:30:06] HOME_URL="https://www.centos.org/"
[2025-11-26 18:30:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:30:06] 
[2025-11-26 18:30:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:30:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:30:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:30:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:30:06] 
[2025-11-26 18:30:06] 2025-11-26 09:29:32,225 | INFO     | ***************************************
[2025-11-26 18:30:06] 2025-11-26 09:29:32,728 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-26 18:30:06] 2025-11-26 09:29:32,743 | INFO     | sufficient remaining disk space (87112548352 B)
[2025-11-26 18:30:06] 2025-11-26 09:29:32,743 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:30:06] 2025-11-26 09:29:32,743 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:30:06] 2025-11-26 09:29:32,743 | INFO     | update_server=False
[2025-11-26 18:30:06] 2025-11-26 09:29:32,743 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:30:06] 2025-11-26 09:29:32,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:30:06] 2025-11-26 09:29:32,744 | INFO     | aborting loop
[2025-11-26 18:30:06] 2025-11-26 09:29:32,770 | INFO     | all data control threads have been joined
[2025-11-26 18:30:06] 2025-11-26 09:29:33,141 | INFO     | all payload control threads have been joined
[2025-11-26 18:30:06] 2025-11-26 09:29:33,625 | INFO     | all job control threads have been joined
[2025-11-26 18:30:06] 2025-11-26 09:29:33,748 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:33,749 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:33,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:30:06] 2025-11-26 09:29:33,775 | INFO     | [data] control thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:33,975 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:34,079 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:34,146 | INFO     | [payload] control thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:34,247 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:34,375 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:34,534 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:34,630 | INFO     | [job] control thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:34,692 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:35,100 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:35,134 | INFO     | [job] validate thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:35,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:30:06] 2025-11-26 09:29:35,641 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:30:06] 2025-11-26 09:29:35,765 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:36,646 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:29:39,304 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:30:06] 2025-11-26 09:30:00,197 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:30:06] 2025-11-26 09:30:00,940 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140420369999680)>', '<ExcThread(monitor, started 140419643987712)>']
[2025-11-26 18:30:06] 2025-11-26 09:30:03,493 | INFO     | PID=1732115 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 18:30:06] 2025-11-26 09:30:03,494 | INFO     | .. there are 2 such processes running
[2025-11-26 18:30:06] 2025-11-26 09:30:03,584 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:30:06] 2025-11-26 09:30:03,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:30:06] 2025-11-26 09:30:03,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:30:06] 2025-11-26 09:30:03,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:30:06] 2025-11-26 09:30:03,585 | INFO     | [monitor] control thread has ended
[2025-11-26 18:30:06] 2025-11-26 09:30:05,966 | INFO     | all workflow threads have been joined
[2025-11-26 18:30:06] 2025-11-26 09:30:05,966 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:30:06] 2025-11-26 09:30:05,966 | INFO     | traces error code: 0
[2025-11-26 18:30:06] 2025-11-26 09:30:05,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:30:06] 2025-11-26 09:30:06,075 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:30:06] 2025-11-26 09:30:06,078 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:30:06] 2025-11-26 09:30:06,080 [wrapper] pilotpid: 1732115
[2025-11-26 18:30:06] 2025-11-26 09:30:06,082 [wrapper] Pilot exit status: 0
[2025-11-26 18:30:06] 2025-11-26 09:30:06,091 [wrapper] pandaids: 6896296869
[2025-11-26 18:30:06] 2025-11-26 09:30:06,112 [wrapper] cleanup supervisor_pilot 1870819 1732116
[2025-11-26 18:30:06] 2025-11-26 09:30:06,115 [wrapper] Test setup, not cleaning
[2025-11-26 18:30:06] 2025-11-26 09:30:06,117 [wrapper] apfmon messages muted
[2025-11-26 18:30:06] 2025-11-26 09:30:06,119 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:30:06] 2025-11-26 09:30:06,121 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:30:06]  *** Error codes and diagnostics ***
[2025-11-26 18:30:06]     "exeErrorCode": 0,
[2025-11-26 18:30:06]     "exeErrorDiag": "",
[2025-11-26 18:30:06]     "pilotErrorCode": 0,
[2025-11-26 18:30:06]     "pilotErrorDiag": "",
[2025-11-26 18:30:06]  *** Listing of results directory ***
[2025-11-26 18:30:06] total 1304896
[2025-11-26 18:30:06] -rw-r--r--. 1 boinc boinc    576529 Nov 25 09:10 pilot3.tar.gz
[2025-11-26 18:30:06] -rw-r--r--. 1 boinc boinc      5112 Nov 25 09:34 queuedata.json
[2025-11-26 18:30:06] -rwx------. 1 boinc boinc     36292 Nov 25 09:34 runpilot2-wrapper.sh
[2025-11-26 18:30:06] -rw-r--r--. 1 boinc boinc       100 Nov 26 07:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:30:06] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 07:24 run_atlas
[2025-11-26 18:30:06] -rw-r--r--. 1 boinc boinc       105 Nov 26 07:24 job.xml
[2025-11-26 18:30:06] -rw-r--r--. 1 boinc boinc      9363 Nov 26 07:24 init_data.xml
[2025-11-26 18:30:06] -rw-r--r--. 2 boinc boinc 408095249 Nov 26 07:24 EVNT.47483658._001454.pool.root.1
[2025-11-26 18:30:06] -rw-r--r--. 2 boinc boinc     15847 Nov 26 07:24 start_atlas.sh
[2025-11-26 18:30:06] drwxrwx--x. 2 boinc boinc        68 Nov 26 07:24 shared
[2025-11-26 18:30:06] -rw-r--r--. 2 boinc boinc    590110 Nov 26 07:24 input.tar.gz
[2025-11-26 18:30:06] -rw-r--r--. 1 boinc boinc         0 Nov 26 07:24 boinc_lockfile
[2025-11-26 18:30:06] -rw-r--r--. 1 boinc boinc      2786 Nov 26 07:25 pandaJob.out
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc    991877 Nov 26 07:26 agis_schedconf.cvmfs.json
[2025-11-26 18:30:06] drwx------. 5 boinc boinc      4096 Nov 26 07:26 pilot3
[2025-11-26 18:30:06] -rw-r--r--. 1 boinc boinc       533 Nov 26 18:18 boinc_task_state.xml
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc 909814128 Nov 26 18:27 HITS.47556149._004410.pool.root.1
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc      1036 Nov 26 18:28 memory_monitor_summary.json
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc   1516240 Nov 26 18:28 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc   1681372 Nov 26 18:28 log.47556149._004410.job.log.tgz.1
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc      8586 Nov 26 18:29 heartbeat.json
[2025-11-26 18:30:06] -rw-r--r--. 1 boinc boinc      8192 Nov 26 18:29 boinc_mmap_file
[2025-11-26 18:30:06] -rw-r--r--. 1 boinc boinc        29 Nov 26 18:29 wrapper_checkpoint.txt
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc        95 Nov 26 18:30 pilot_heartbeat.json
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc      4823 Nov 26 18:30 pilotlog.txt
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc   5516157 Nov 26 18:30 log.47556149._004410.job.log.1
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc       353 Nov 26 18:30 output.list
[2025-11-26 18:30:06] -rw-r--r--. 1 boinc boinc       620 Nov 26 18:30 runtime_log
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc   7219200 Nov 26 18:30 result.tar.gz
[2025-11-26 18:30:06] -rw-r--r--. 1 boinc boinc      8776 Nov 26 18:30 runtime_log.err
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc       652 Nov 26 18:30 8YYMDmkBwh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgFJKDmK1qbkm.diag
[2025-11-26 18:30:06] -rw-r--r--. 1 boinc boinc     20771 Nov 26 18:30 stderr.txt
[2025-11-26 18:30:06] HITS file was successfully produced:
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc 909814128 Nov 26 18:27 shared/HITS.pool.root.1
[2025-11-26 18:30:06]  *** Contents of shared directory: ***
[2025-11-26 18:30:06] total 1294672
[2025-11-26 18:30:06] -rw-r--r--. 2 boinc boinc 408095249 Nov 26 07:24 ATLAS.root_0
[2025-11-26 18:30:06] -rw-r--r--. 2 boinc boinc     15847 Nov 26 07:24 start_atlas.sh
[2025-11-26 18:30:06] -rw-r--r--. 2 boinc boinc    590110 Nov 26 07:24 input.tar.gz
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc 909814128 Nov 26 18:27 HITS.pool.root.1
[2025-11-26 18:30:06] -rw-------. 1 boinc boinc   7219200 Nov 26 18:30 result.tar.gz
18:30:07 (1727962): run_atlas exited; CPU time 222980.837418
18:30:07 (1727962): called boinc_finish(0)

</stderr_txt>
]]>

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