Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-26 07:55:57 (341133): vboxwrapper version 26210
2025-11-26 07:55:57 (341133): BOINC client version: 7.18.1
2025-11-26 07:55:59 (341133): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-11-26 07:55:59 (341133): Successfully copied 'init_data.xml' to the shared directory.
2025-11-26 07:55:59 (341133): Create VM. (boinc_e35d4673a98ae2ce, slot#1)
2025-11-26 07:55:59 (341133): Setting Memory Size for VM. (4600MB)
2025-11-26 07:55:59 (341133): Setting CPU Count for VM. (6)
2025-11-26 07:55:59 (341133): Setting Chipset Options for VM.
2025-11-26 07:55:59 (341133): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-26 07:56:00 (341133): Setting Boot Options for VM.
2025-11-26 07:56:00 (341133): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-26 07:56:00 (341133): Enabling VM Network Access.
2025-11-26 07:56:00 (341133): Disabling USB Support for VM.
2025-11-26 07:56:00 (341133): Disabling COM Port Support for VM.
2025-11-26 07:56:00 (341133): Disabling LPT Port Support for VM.
2025-11-26 07:56:00 (341133): Disabling Audio Support for VM.
2025-11-26 07:56:00 (341133): Disabling Clipboard Support for VM.
2025-11-26 07:56:00 (341133): Disabling Drag and Drop Support for VM.
2025-11-26 07:56:00 (341133): Adding storage controller(s) to VM.
2025-11-26 07:56:00 (341133): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-26 07:56:00 (341133): Adding VirtualBox Guest Additions to VM.
2025-11-26 07:56:00 (341133): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-26 07:56:00 (341133): forwarding host port 37625 to guest port 80
2025-11-26 07:56:00 (341133): Enabling remote desktop for VM.
2025-11-26 07:56:00 (341133): Required extension pack not installed, remote desktop not enabled.
2025-11-26 07:56:00 (341133): Enabling shared directory for VM.
2025-11-26 07:56:00 (341133): Starting VM using VBoxManage interface. (boinc_e35d4673a98ae2ce, slot#1)
2025-11-26 07:56:01 (341133): Successfully started VM. (PID = '341623')
2025-11-26 07:56:01 (341133): Reporting VM Process ID to BOINC.
2025-11-26 07:56:01 (341133): Guest Log: BIOS: VirtualBox 6.1.50
2025-11-26 07:56:01 (341133): Guest Log: CPUID EDX: 0x178bfbff
2025-11-26 07:56:01 (341133): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-26 07:56:01 (341133): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-26 07:56:01 (341133): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-26 07:56:01 (341133): Detected: Web Application Enabled (http://localhost:37625)
2025-11-26 07:56:01 (341133): Preference change detected
2025-11-26 07:56:01 (341133): Setting CPU throttle for VM. (90%)
2025-11-26 07:56:01 (341133): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-26 07:56:03 (341133): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-26 07:56:03 (341133): Guest Log: BIOS: Booting from Hard Disk...
2025-11-26 07:56:05 (341133): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-26 07:56:05 (341133): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-26 07:56:05 (341133): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-26 07:56:12 (341133): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-26 07:56:12 (341133): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-26 07:56:16 (341133): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-26 07:56:16 (341133): Guest Log: 00:00:00.000119 main     Log opened 2025-11-26T05:56:14.320895000Z
2025-11-26 07:56:16 (341133): Guest Log: 00:00:00.000230 main     OS Product: Linux
2025-11-26 07:56:16 (341133): Guest Log: 00:00:00.000259 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-26 07:56:16 (341133): Guest Log: 00:00:00.000290 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-26 07:56:16 (341133): Guest Log: 00:00:00.000313 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-26 07:56:16 (341133): Guest Log: 00:00:00.000314 main     Process ID: 1336
2025-11-26 07:56:16 (341133): Guest Log: 00:00:00.000314 main     Package type: LINUX_64BITS_GENERIC
2025-11-26 07:56:16 (341133): Guest Log: 00:00:00.001333 main     5.2.32 r132073 started. Verbose level = 0
2025-11-26 07:56:16 (341133): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-26 07:56:16 (341133): Guest Log: [INFO] Mounting shared directory
2025-11-26 07:56:16 (341133): Guest Log: [INFO] Checking for init_data.xml
2025-11-26 07:56:18 (341133): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-26 07:56:18 (341133): Guest Log: [INFO] Detected branch: prod
2025-11-26 07:56:19 (341133): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-26 07:56:19 (341133): Guest Log: Copying input files
2025-11-26 07:56:20 (341133): Guest Log: Copied input files into RunAtlas.
2025-11-26 07:56:20 (341133): Guest Log: Detected user-configured HTTP proxy at http://proxy.kippola.kiulu10clients.net:3128 - will set in /etc/cvmfs/default.local
2025-11-26 07:56:28 (341133): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-26 07:56:28 (341133): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-26 07:56:28 (341133): Guest Log: 2.6.3.0 1612 0 29604 153311 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2025-11-26 07:56:29 (341133): Guest Log: copied the webapp to /var/www
2025-11-26 07:56:29 (341133): Guest Log: ATHENA_PROC_NUMBER=6
2025-11-26 07:56:29 (341133): Guest Log: ATHENA_CORE_NUMBER=6
2025-11-26 07:56:29 (341133): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-26 07:56:29 (341133): Guest Log:  *** Starting ATLAS job. (PandaID=6895618309 taskID=47556149) ***
2025-11-26 09:35:02 (341133): Status Report: Elapsed Time: '6000.000000'
2025-11-26 09:35:02 (341133): Status Report: CPU Time: '30932.920000'
2025-11-26 11:14:02 (341133): Status Report: Elapsed Time: '12000.000000'
2025-11-26 11:14:02 (341133): Status Report: CPU Time: '63241.330000'
2025-11-26 12:53:03 (341133): Status Report: Elapsed Time: '18000.000000'
2025-11-26 12:53:03 (341133): Status Report: CPU Time: '95548.600000'
2025-11-26 14:32:03 (341133): Status Report: Elapsed Time: '24000.000000'
2025-11-26 14:32:03 (341133): Status Report: CPU Time: '127857.920000'
2025-11-26 16:11:03 (341133): Status Report: Elapsed Time: '30000.000000'
2025-11-26 16:11:03 (341133): Status Report: CPU Time: '160163.890000'
2025-11-26 16:45:41 (341133): Guest Log:  *** Job finished ***
2025-11-26 16:45:41 (341133): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:26,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:26,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:27,484 | INFO     | [monitor] cgroup control has ended
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:28,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140319336404800)>', '<ExcThread(monitor, started 140318435428096)>']
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:28,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:28,864 | INFO     | [monitor] control thread has ended
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,499 | INFO     | all workflow threads have been joined
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,500 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,500 | INFO     | traces error code: 0
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,704 [wrapper] ==== pilot stdout END ====
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,724 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,745 [wrapper] pilotpid: 6016
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,767 [wrapper] Pilot exit status: 0
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,835 [wrapper] pandaids: 6895618309
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,959 [wrapper] cleanup supervisor_pilot  8356 6017
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,966 [wrapper] Test setup, not cleaning
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,970 [wrapper] apfmon messages muted
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,974 [wrapper] ==== wrapper stdout END ====
2025-11-26 16:45:41 (341133): Guest Log: 2025-11-26 14:45:33,978 [wrapper] ==== wrapper stderr END ====
2025-11-26 16:45:41 (341133): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 16:45:41 (341133): Guest Log:     "exeErrorCode": 0,
2025-11-26 16:45:41 (341133): Guest Log:     "exeErrorDiag": "",
2025-11-26 16:45:41 (341133): Guest Log:     "pilotErrorCode": 0,
2025-11-26 16:45:41 (341133): Guest Log:     "pilotErrorDiag": "",
2025-11-26 16:45:41 (341133): Guest Log:  *** Listing of results directory ***
2025-11-26 16:45:41 (341133): Guest Log: total 922864
2025-11-26 16:45:41 (341133): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 24 11:12 pilot3.tar.gz
2025-11-26 16:45:41 (341133): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 24 11:36 runpilot2-wrapper.sh
2025-11-26 16:45:41 (341133): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 24 11:36 queuedata.json
2025-11-26 16:45:41 (341133): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 26 05:56 start_atlas.sh
2025-11-26 16:45:41 (341133): Guest Log: -rw-r--r--. 1 atlas atlas      7497 Nov 26 05:56 init_data.xml
2025-11-26 16:45:41 (341133): Guest Log: -rw-r--r--. 1 atlas atlas    590107 Nov 26 05:56 input.tar.gz
2025-11-26 16:45:41 (341133): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 05:56 EVNT.47483658._001328.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 16:45:41 (341133): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 26 05:56 pandaJob.out
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas        69 Nov 26 05:56 setup.sh.local
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas    991877 Nov 26 05:56 agis_schedconf.cvmfs.json
2025-11-26 16:45:41 (341133): Guest Log: drwx------. 5 atlas atlas      4096 Nov 26 05:56 pilot3
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas 929944491 Nov 26 14:44 HITS.47556149._003147.pool.root.1
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas      1044 Nov 26 14:44 memory_monitor_summary.json
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 14:44 agis_ddmendpoints.agis.ALL.json
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas   1564553 Nov 26 14:44 log.47556149._003147.job.log.tgz.1
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas      8653 Nov 26 14:44 heartbeat.json
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 14:45 pilot_heartbeat.json
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas      4877 Nov 26 14:45 pilotlog.txt
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas   4045590 Nov 26 14:45 log.47556149._003147.job.log.1
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 14:45 output.list
2025-11-26 16:45:41 (341133): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 14:45 runtime_log
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas   5632000 Nov 26 14:45 result.tar.gz
2025-11-26 16:45:41 (341133): Guest Log: -rw-r--r--. 1 atlas atlas      9388 Nov 26 14:45 runtime_log.err
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas       681 Nov 26 14:45 gl4KDmm2jh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqeLKDmSLqkIn.diag
2025-11-26 16:45:41 (341133): Guest Log: Looking for outputfile HITS.47556149._003147.pool.root.1
2025-11-26 16:45:41 (341133): Guest Log: HITS file was successfully produced
2025-11-26 16:45:41 (341133): Guest Log: -rw-------. 1 atlas atlas 929944491 Nov 26 14:44 /home/atlas/RunAtlas/HITS.47556149._003147.pool.root.1
2025-11-26 16:45:41 (341133): Guest Log: Successfully finished the ATLAS job!
2025-11-26 16:45:41 (341133): Guest Log: Copying the results back to the shared directory!
2025-11-26 16:45:41 (341133): Guest Log:  *** Contents of shared directory: ***
2025-11-26 16:45:41 (341133): Guest Log: total 402850
2025-11-26 16:45:41 (341133): Guest Log: -rw-r--r--. 1 root root 411656901 Nov 26 05:55 ATLAS.root_0
2025-11-26 16:45:41 (341133): Guest Log: -rw-r--r--. 1 root root      7497 Nov 26 05:55 init_data.xml
2025-11-26 16:45:41 (341133): Guest Log: -rw-r--r--. 1 root root    590107 Nov 26 05:55 input.tar.gz
2025-11-26 16:45:41 (341133): Guest Log: -rw-r--r--. 1 root root   5632000 Nov 26 14:45 result.tar.gz
2025-11-26 16:45:41 (341133): Guest Log: -rw-r--r--. 1 root root     15847 Nov 26 05:55 start_atlas.sh
2025-11-26 16:45:41 (341133): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 16:45:41 (341133): VM Completion File Detected.
2025-11-26 16:45:41 (341133): Powering off VM.
2025-11-26 16:45:41 (341133): Successfully stopped VM.
2025-11-26 16:45:41 (341133): Deregistering VM. (boinc_e35d4673a98ae2ce, slot#1)
2025-11-26 16:45:41 (341133): Removing network bandwidth throttle group from VM.
2025-11-26 16:45:41 (341133): Removing VM from VirtualBox.
2025-11-26 16:45:46 (341133): called boinc_finish(0)

</stderr_txt>
]]>

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