Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:22:47 (11812): wrapper (7.7.26015): starting
15:22:47 (11812): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 15:22:47] Arguments: --nthreads 8
[2025-11-25 15:22:47] Threads: 8
[2025-11-25 15:22:47] Checking for CVMFS
[2025-11-25 15:22:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 15:22:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 15:22:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 15:22:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 15:22:47] 2.11.2.0 2880 152432 87392 153296 1 71 19912558 20275200 1 130560 0 59531015 99.975 5396948 22041 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 15:22:47] CVMFS is ok
[2025-11-25 15:22:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 15:22:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 15:22:47] Further information can be found at the LHC@home message board.
[2025-11-25 15:22:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 15:22:47] Checking for apptainer binary...
[2025-11-25 15:22:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 15:22:47] Running /usr/bin/apptainer --version
[2025-11-25 15:22:48] apptainer version 1.3.2-1.el7
[2025-11-25 15:22:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 15:22:49] c-115-10.aglt2.org
[2025-11-25 15:22:49] apptainer works
[2025-11-25 15:22:49] Set ATHENA_PROC_NUMBER=8
[2025-11-25 15:22:49] Set ATHENA_CORE_NUMBER=8
[2025-11-25 15:22:49] Starting ATLAS job with PandaID=6895559481
[2025-11-25 15:22:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:40:38]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:40:38] 2025-11-26 07:40:03,476 | INFO     | monitor loop #2965: job 0:6895559481 is in state 'finished'
[2025-11-26 02:40:38] 2025-11-26 07:40:03,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:40:38] 2025-11-26 07:40:03,679 | INFO     | PID=16461 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 02:40:38] 2025-11-26 07:40:04,680 | INFO     | time since job start (40618s) is within the limit (172800.0s)
[2025-11-26 02:40:38] 2025-11-26 07:40:05,142 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 02:40:38] 2025-11-26 07:40:05,148 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-26 02:40:38] 2025-11-26 07:40:05,150 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895559481/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:40:38] 2025-11-26 07:40:05,150 | INFO     | extracted standard info from prmon json
[2025-11-26 02:40:38] 2025-11-26 07:40:05,151 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:40:38] 2025-11-26 07:40:05,151 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:40:38] 2025-11-26 07:40:05,161 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:40:38] 2025-11-26 07:40:05,162 | INFO     | sum of square deviations: 91600796945.80887
[2025-11-26 02:40:38] 2025-11-26 07:40:05,171 | INFO     | sum of deviations: 664078608532.895
[2025-11-26 02:40:38] 2025-11-26 07:40:05,171 | INFO     | mean x: 1764122501.1606607
[2025-11-26 02:40:38] 2025-11-26 07:40:05,171 | INFO     | mean y: 3063664.057057057
[2025-11-26 02:40:38] 2025-11-26 07:40:05,171 | INFO     | intersect: -12786301220.45822
[2025-11-26 02:40:38] 2025-11-26 07:40:05,172 | INFO     | chi2: 6.061077564716549
[2025-11-26 02:40:38] 2025-11-26 07:40:05,172 | INFO     | sum of square deviations: 89553292751.11061
[2025-11-26 02:40:38] 2025-11-26 07:40:05,181 | INFO     | sum of deviations: 892340531604.2356
[2025-11-26 02:40:38] 2025-11-26 07:40:05,181 | INFO     | mean x: 1764122348.665658
[2025-11-26 02:40:38] 2025-11-26 07:40:05,181 | INFO     | mean y: 3080652.8517397884
[2025-11-26 02:40:38] 2025-11-26 07:40:05,181 | INFO     | intersect: -17575255397.820206
[2025-11-26 02:40:38] 2025-11-26 07:40:05,182 | INFO     | chi2: 3.034497291491809
[2025-11-26 02:40:38] 2025-11-26 07:40:05,182 | INFO     | current chi2=3.034497291491809 (change=49.934689680320574 %)
[2025-11-26 02:40:38] 2025-11-26 07:40:05,183 | INFO     | sum of square deviations: 87536493242.21788
[2025-11-26 02:40:38] 2025-11-26 07:40:05,191 | INFO     | sum of deviations: 985860985115.8966
[2025-11-26 02:40:38] 2025-11-26 07:40:05,191 | INFO     | mean x: 1764122196.1692073
[2025-11-26 02:40:38] 2025-11-26 07:40:05,191 | INFO     | mean y: 3087709.163109756
[2025-11-26 02:40:38] 2025-11-26 07:40:05,191 | INFO     | intersect: -19864960253.048462
[2025-11-26 02:40:38] 2025-11-26 07:40:05,192 | INFO     | chi2: 2.2955792071664924
[2025-11-26 02:40:38] 2025-11-26 07:40:05,192 | INFO     | current chi2=2.2955792071664924 (change=24.350592976210965 %)
[2025-11-26 02:40:38] 2025-11-26 07:40:05,192 | INFO     | right removable region: 655
[2025-11-26 02:40:38] 2025-11-26 07:40:05,193 | INFO     | sum of square deviations: 89553064733.4403
[2025-11-26 02:40:38] 2025-11-26 07:40:05,201 | INFO     | sum of deviations: 474070939087.84973
[2025-11-26 02:40:38] 2025-11-26 07:40:05,201 | INFO     | mean x: 1764122653.6641452
[2025-11-26 02:40:38] 2025-11-26 07:40:05,201 | INFO     | mean y: 3077789.3101361576
[2025-11-26 02:40:38] 2025-11-26 07:40:05,201 | INFO     | intersect: -9335734741.316948
[2025-11-26 02:40:38] 2025-11-26 07:40:05,202 | INFO     | chi2: 3.938444113567751
[2025-11-26 02:40:38] 2025-11-26 07:40:05,202 | INFO     | current chi2=3.938444113567751 (change=35.02072739516352 %)
[2025-11-26 02:40:38] 2025-11-26 07:40:05,203 | INFO     | sum of square deviations: 87536157804.21974
[2025-11-26 02:40:38] 2025-11-26 07:40:05,211 | INFO     | sum of deviations: 433943909917.9824
[2025-11-26 02:40:38] 2025-11-26 07:40:05,211 | INFO     | mean x: 1764122806.1646342
[2025-11-26 02:40:38] 2025-11-26 07:40:05,211 | INFO     | mean y: 3080821.111280488
[2025-11-26 02:40:38] 2025-11-26 07:40:05,211 | INFO     | intersect: -8742223602.630077
[2025-11-26 02:40:38] 2025-11-26 07:40:05,212 | INFO     | chi2: 3.897022929468667
[2025-11-26 02:40:38] 2025-11-26 07:40:05,212 | INFO     | current chi2=3.897022929468667 (change=1.0517144056047334 %)
[2025-11-26 02:40:38] 2025-11-26 07:40:05,212 | INFO     | left removable region: 20
[2025-11-26 02:40:38] 2025-11-26 07:40:05,213 | INFO     | sum of square deviations: 79395991570.55109
[2025-11-26 02:40:38] 2025-11-26 07:40:05,220 | INFO     | sum of deviations: 699803334544.3538
[2025-11-26 02:40:38] 2025-11-26 07:40:05,220 | INFO     | mean x: 1764122775.6692913
[2025-11-26 02:40:38] 2025-11-26 07:40:05,220 | INFO     | mean y: 3109488.587401575
[2025-11-26 02:40:38] 2025-11-26 07:40:05,221 | INFO     | intersect: -15546025631.943243
[2025-11-26 02:40:38] 2025-11-26 07:40:05,221 | INFO     | chi2: 0.09237558951408463
[2025-11-26 02:40:38] 2025-11-26 07:40:05,221 | INFO     | current memory leak: 8.81 B/s (using 635 data points, chi2=0.09)
[2025-11-26 02:40:38] 2025-11-26 07:40:05,222 | INFO     | could have reported an average CPU frequency of 2377 MHz (26 samples)
[2025-11-26 02:40:38] 2025-11-26 07:40:05,222 | INFO     | ..............................
[2025-11-26 02:40:38] 2025-11-26 07:40:05,222 | INFO     | . Timing measurements:
[2025-11-26 02:40:38] 2025-11-26 07:40:05,222 | INFO     | . get job = 0 s
[2025-11-26 02:40:38] 2025-11-26 07:40:05,222 | INFO     | . initial setup = 2 s
[2025-11-26 02:40:38] 2025-11-26 07:40:05,222 | INFO     | . payload setup = 8 s
[2025-11-26 02:40:38] 2025-11-26 07:40:05,223 | INFO     | . stage-in = 0 s
[2025-11-26 02:40:38] 2025-11-26 07:40:05,223 | INFO     | . payload execution = 40577 s
[2025-11-26 02:40:38] 2025-11-26 07:40:05,223 | INFO     | . stage-out = 3 s
[2025-11-26 02:40:38] 2025-11-26 07:40:05,223 | INFO     | . log creation = 0 s
[2025-11-26 02:40:38] 2025-11-26 07:40:05,223 | INFO     | ..............................
[2025-11-26 02:40:38] 2025-11-26 07:40:05,303 | INFO     | 
[2025-11-26 02:40:38] 2025-11-26 07:40:05,303 | INFO     | job summary report
[2025-11-26 02:40:38] 2025-11-26 07:40:05,304 | INFO     | --------------------------------------------------
[2025-11-26 02:40:38] 2025-11-26 07:40:05,304 | INFO     | PanDA job id: 6895559481
[2025-11-26 02:40:38] 2025-11-26 07:40:05,304 | INFO     | task id: 47556161
[2025-11-26 02:40:38] 2025-11-26 07:40:05,304 | INFO     | errors: (none)
[2025-11-26 02:40:38] 2025-11-26 07:40:05,304 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:40:38] 2025-11-26 07:40:05,305 | INFO     | pilot state: finished 
[2025-11-26 02:40:38] 2025-11-26 07:40:05,305 | INFO     | transexitcode: 0
[2025-11-26 02:40:38] 2025-11-26 07:40:05,305 | INFO     | exeerrorcode: 0
[2025-11-26 02:40:38] 2025-11-26 07:40:05,305 | INFO     | exeerrordiag: 
[2025-11-26 02:40:38] 2025-11-26 07:40:05,305 | INFO     | exitcode: 0
[2025-11-26 02:40:38] 2025-11-26 07:40:05,305 | INFO     | exitmsg: OK
[2025-11-26 02:40:38] 2025-11-26 07:40:05,306 | INFO     | cpuconsumptiontime: 315804 s
[2025-11-26 02:40:38] 2025-11-26 07:40:05,306 | INFO     | nevents: 1000
[2025-11-26 02:40:38] 2025-11-26 07:40:05,306 | INFO     | neventsw: 0
[2025-11-26 02:40:38] 2025-11-26 07:40:05,306 | INFO     | pid: 22827
[2025-11-26 02:40:38] 2025-11-26 07:40:05,306 | INFO     | pgrp: 22827
[2025-11-26 02:40:38] 2025-11-26 07:40:05,306 | INFO     | corecount: 8
[2025-11-26 02:40:38] 2025-11-26 07:40:05,306 | INFO     | event service: False
[2025-11-26 02:40:38] 2025-11-26 07:40:05,307 | INFO     | sizes: {0: 2284091, 1: 2284290, 7: 2284552, 11: 2284580, 40590: 2328397, 40593: 2337391, 40594: 2337575, 40601: 2337821}
[2025-11-26 02:40:38] 2025-11-26 07:40:05,307 | INFO     | --------------------------------------------------
[2025-11-26 02:40:38] 2025-11-26 07:40:05,307 | INFO     | 
[2025-11-26 02:40:38] 2025-11-26 07:40:05,307 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 02:40:38] 2025-11-26 07:40:05,335 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,336 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,336 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,336 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,338 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:40:38] 2025-11-26 07:40:05,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,338 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:40:38] 2025-11-26 07:40:05,339 | INFO     | job 6895559481 has completed (purged errors)
[2025-11-26 02:40:38] 2025-11-26 07:40:05,339 | INFO     | overall cleanup function is called
[2025-11-26 02:40:38] 2025-11-26 07:40:06,348 | INFO     | --- collectZombieJob: --- 10, [22827]
[2025-11-26 02:40:38] 2025-11-26 07:40:06,348 | INFO     | zombie collector waiting for pid 22827
[2025-11-26 02:40:38] 2025-11-26 07:40:06,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:40:38] 2025-11-26 07:40:06,349 | INFO     | collected zombie processes
[2025-11-26 02:40:38] 2025-11-26 07:40:06,349 | INFO     | will attempt to kill all subprocesses of pid=22827
[2025-11-26 02:40:38] 2025-11-26 07:40:06,440 | INFO     | process IDs to be killed: [22827] (in reverse order)
[2025-11-26 02:40:38] 2025-11-26 07:40:06,499 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:40:38] 2025-11-26 07:40:06,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:40:38] 2025-11-26 07:40:06,505 | INFO     | did not find any defunct processes belonging to 22827
[2025-11-26 02:40:38] 2025-11-26 07:40:06,508 | INFO     | did not find any defunct processes belonging to 22827
[2025-11-26 02:40:38] 2025-11-26 07:40:06,511 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:40:38] 2025-11-26 07:40:06,511 | INFO     | ready for new job
[2025-11-26 02:40:38] 2025-11-26 07:40:06,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:40:38] 2025-11-26 07:40:06,514 | INFO     | ***************************************
[2025-11-26 02:40:38] 2025-11-26 07:40:06,515 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:40:38] 2025-11-26 07:40:06,515 | INFO     | ***************************************
[2025-11-26 02:40:38] 2025-11-26 07:40:06,515 | INFO     | 
[2025-11-26 02:40:38] 2025-11-26 07:40:06,515 | INFO     | architecture information:
[2025-11-26 02:40:38] 2025-11-26 07:40:06,516 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:40:38] 2025-11-26 07:40:06,535 | INFO     | cat /etc/os-release:
[2025-11-26 02:40:38] NAME="CentOS Linux"
[2025-11-26 02:40:38] VERSION="7 (Core)"
[2025-11-26 02:40:38] ID="centos"
[2025-11-26 02:40:38] ID_LIKE="rhel fedora"
[2025-11-26 02:40:38] VERSION_ID="7"
[2025-11-26 02:40:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:40:38] ANSI_COLOR="0;31"
[2025-11-26 02:40:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:40:38] HOME_URL="https://www.centos.org/"
[2025-11-26 02:40:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:40:38] 
[2025-11-26 02:40:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:40:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:40:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:40:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:40:38] 
[2025-11-26 02:40:38] 2025-11-26 07:40:06,536 | INFO     | ***************************************
[2025-11-26 02:40:38] 2025-11-26 07:40:07,039 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 02:40:38] 2025-11-26 07:40:07,061 | INFO     | sufficient remaining disk space (17468227584 B)
[2025-11-26 02:40:38] 2025-11-26 07:40:07,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:40:38] 2025-11-26 07:40:07,062 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:40:38] 2025-11-26 07:40:07,062 | INFO     | update_server=False
[2025-11-26 02:40:38] 2025-11-26 07:40:07,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:40:38] 2025-11-26 07:40:07,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:40:38] 2025-11-26 07:40:07,063 | INFO     | aborting loop
[2025-11-26 02:40:38] 2025-11-26 07:40:07,064 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:40:38] 2025-11-26 07:40:07,182 | INFO     | all data control threads have been joined
[2025-11-26 02:40:38] 2025-11-26 07:40:07,305 | INFO     | all job control threads have been joined
[2025-11-26 02:40:38] 2025-11-26 07:40:07,783 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:40:38] 2025-11-26 07:40:08,065 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:08,068 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:08,069 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:08,144 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:08,155 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:08,178 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:08,188 | INFO     | [data] control thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:08,293 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:08,311 | INFO     | [job] control thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:08,540 | INFO     | all payload control threads have been joined
[2025-11-26 02:40:38] 2025-11-26 07:40:08,625 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:08,732 | INFO     | [job] validate thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:08,807 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:40:38] 2025-11-26 07:40:09,168 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:09,545 | INFO     | [payload] control thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:09,593 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:09,789 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:12,813 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:40:38] 2025-11-26 07:40:13,640 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:40:38] 2025-11-26 07:40:15,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139771742230336)>', '<ExcThread(monitor, started 139771137464064)>']
[2025-11-26 02:40:38] 2025-11-26 07:40:20,353 | INFO     | all workflow threads have been joined
[2025-11-26 02:40:38] 2025-11-26 07:40:20,354 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:40:38] 2025-11-26 07:40:20,354 | INFO     | traces error code: 0
[2025-11-26 02:40:38] 2025-11-26 07:40:20,354 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:40:38] 2025-11-26 07:40:37,894 | INFO     | PID=16461 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 02:40:38] 2025-11-26 07:40:37,894 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:40:38] 2025-11-26 07:40:37,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:40:38] 2025-11-26 07:40:37,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:40:38] 2025-11-26 07:40:37,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:40:38] 2025-11-26 07:40:37,895 | INFO     | [monitor] control thread has ended
[2025-11-26 02:40:38] 2025-11-26 07:40:38,003 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:40:38] 2025-11-26 07:40:38,007 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:40:38] 2025-11-26 07:40:38,012 [wrapper] pilotpid: 16461
[2025-11-26 02:40:38] 2025-11-26 07:40:38,017 [wrapper] Pilot exit status: 0
[2025-11-26 02:40:38] 2025-11-26 07:40:38,034 [wrapper] pandaids: 6895559481
[2025-11-26 02:40:38] 2025-11-26 07:40:38,079 [wrapper] cleanup supervisor_pilot  1418 16462
[2025-11-26 02:40:38] 2025-11-26 07:40:38,083 [wrapper] Test setup, not cleaning
[2025-11-26 02:40:38] 2025-11-26 07:40:38,088 [wrapper] apfmon messages muted
[2025-11-26 02:40:38] 2025-11-26 07:40:38,094 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:40:38] 2025-11-26 07:40:38,098 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:40:38]  *** Error codes and diagnostics ***
[2025-11-26 02:40:38]     "exeErrorCode": 0,
[2025-11-26 02:40:38]     "exeErrorDiag": "",
[2025-11-26 02:40:38]     "pilotErrorCode": 0,
[2025-11-26 02:40:38]     "pilotErrorDiag": "",
[2025-11-26 02:40:38]  *** Listing of results directory ***
[2025-11-26 02:40:38] total 1317736
[2025-11-26 02:40:38] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 05:13 pilot3.tar.gz
[2025-11-26 02:40:38] -rwx------ 1 boincer umatlas     36292 Nov 24 05:42 runpilot2-wrapper.sh
[2025-11-26 02:40:38] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 05:42 queuedata.json
[2025-11-26 02:40:38] -rw-r--r-- 1 boincer umatlas       100 Nov 25 15:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:40:38] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 15:22 run_atlas
[2025-11-26 02:40:38] -rw-r--r-- 1 boincer umatlas       105 Nov 25 15:22 job.xml
[2025-11-26 02:40:38] -rw-r--r-- 2 boincer umatlas 410532111 Nov 25 15:22 EVNT.47483658._002034.pool.root.1
[2025-11-26 02:40:38] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 15:22 input.tar.gz
[2025-11-26 02:40:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 15:22 start_atlas.sh
[2025-11-26 02:40:38] drwxrwx--x 2 boincer umatlas      4096 Nov 25 15:22 shared
[2025-11-26 02:40:38] -rw-r--r-- 1 boincer umatlas         0 Nov 25 15:22 boinc_lockfile
[2025-11-26 02:40:38] -rw-r--r-- 1 boincer umatlas      2784 Nov 25 15:22 pandaJob.out
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas        57 Nov 25 15:22 setup.sh.local
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas    991893 Nov 25 15:23 agis_schedconf.cvmfs.json
[2025-11-26 02:40:38] drwx------ 5 boincer umatlas      4096 Nov 25 15:23 pilot3
[2025-11-26 02:40:38] -rw-r--r-- 1 boincer umatlas       533 Nov 26 02:30 boinc_task_state.xml
[2025-11-26 02:40:38] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 02:38 init_data.xml
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas 919888329 Nov 26 02:39 HITS.47556161._000175.pool.root.1
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas        95 Nov 26 02:39 pilot_heartbeat.json
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas      1060 Nov 26 02:39 memory_monitor_summary.json
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas   1516240 Nov 26 02:39 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas   1925962 Nov 26 02:39 log.47556161._000175.job.log.tgz.1
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas      8654 Nov 26 02:40 heartbeat.json
[2025-11-26 02:40:38] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 02:40 boinc_mmap_file
[2025-11-26 02:40:38] -rw-r--r-- 1 boincer umatlas        29 Nov 26 02:40 wrapper_checkpoint.txt
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas       745 Nov 26 02:40 pilotlog.txt
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas   5584453 Nov 26 02:40 log.47556161._000175.job.log.1
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas       353 Nov 26 02:40 output.list
[2025-11-26 02:40:38] -rw-r--r-- 1 boincer umatlas       620 Nov 26 02:40 runtime_log
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas   7526400 Nov 26 02:40 result.tar.gz
[2025-11-26 02:40:38] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 02:40 runtime_log.err
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas       668 Nov 26 02:40 kiMODm6Cjh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmO1IKDm6KNp8n.diag
[2025-11-26 02:40:38] -rw-r--r-- 1 boincer umatlas     21411 Nov 26 02:40 stderr.txt
[2025-11-26 02:40:38] HITS file was successfully produced:
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas 919888329 Nov 26 02:39 shared/HITS.pool.root.1
[2025-11-26 02:40:38]  *** Contents of shared directory: ***
[2025-11-26 02:40:38] total 1307200
[2025-11-26 02:40:38] -rw-r--r-- 2 boincer umatlas 410532111 Nov 25 15:22 ATLAS.root_0
[2025-11-26 02:40:38] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 15:22 input.tar.gz
[2025-11-26 02:40:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 15:22 start_atlas.sh
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas 919888329 Nov 26 02:39 HITS.pool.root.1
[2025-11-26 02:40:38] -rw------- 1 boincer umatlas   7526400 Nov 26 02:40 result.tar.gz
02:40:39 (11812): run_atlas exited; CPU time 313792.760478
02:40:39 (11812): called boinc_finish(0)

</stderr_txt>
]]>

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