Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:30:40 (29438): wrapper (7.7.26015): starting
15:30:40 (29438): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 15:30:40] Arguments: --nthreads 12
[2025-11-25 15:30:40] Threads: 12
[2025-11-25 15:30:40] Checking for CVMFS
[2025-11-25 15:30:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 15:30:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 15:30:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 15:30:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 15:30:40] 2.11.2.0 2925 286724 95852 153296 1 71 18007110 20275200 1 130560 1 127965656 99.975 15747377 13684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 15:30:40] CVMFS is ok
[2025-11-25 15:30:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 15:30:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 15:30:40] Further information can be found at the LHC@home message board.
[2025-11-25 15:30:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 15:30:40] Checking for apptainer binary...
[2025-11-25 15:30:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 15:30:40] Running /usr/bin/apptainer --version
[2025-11-25 15:30:40] apptainer version 1.3.2-1.el7
[2025-11-25 15:30:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 15:30:42] c-205-10.aglt2.org
[2025-11-25 15:30:42] apptainer works
[2025-11-25 15:30:42] Set ATHENA_PROC_NUMBER=12
[2025-11-25 15:30:42] Set ATHENA_CORE_NUMBER=12
[2025-11-25 15:30:42] Starting ATLAS job with PandaID=6895559879
[2025-11-25 15:30:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:43:17]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:43:17] 2025-11-26 05:42:42,051 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:43:17] 2025-11-26 05:42:43,540 | INFO     | time since job start (33106s) is within the limit (172800.0s)
[2025-11-26 00:43:17] 2025-11-26 05:42:44,558 | INFO     | monitor loop #2490: job 0:6895559879 is in state 'finished'
[2025-11-26 00:43:17] 2025-11-26 05:42:44,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:43:17] 2025-11-26 05:42:45,197 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 00:43:17] 2025-11-26 05:42:45,201 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1817.75
[2025-11-26 00:43:17] 2025-11-26 05:42:45,204 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895559879/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:43:17] 2025-11-26 05:42:45,205 | INFO     | extracted standard info from prmon json
[2025-11-26 00:43:17] 2025-11-26 05:42:45,205 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:43:17] 2025-11-26 05:42:45,205 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:43:17] 2025-11-26 05:42:45,214 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:43:17] 2025-11-26 05:42:45,215 | INFO     | sum of square deviations: 49645004604.99432
[2025-11-26 00:43:17] 2025-11-26 05:42:45,222 | INFO     | sum of deviations: 649130060759.4983
[2025-11-26 00:43:17] 2025-11-26 05:42:45,222 | INFO     | mean x: 1764119218.0607734
[2025-11-26 00:43:17] 2025-11-26 05:42:45,222 | INFO     | mean y: 3418818.197053407
[2025-11-26 00:43:17] 2025-11-26 05:42:45,222 | INFO     | intersect: -23063208414.85967
[2025-11-26 00:43:17] 2025-11-26 05:42:45,223 | INFO     | chi2: 6.5678822177680045
[2025-11-26 00:43:17] 2025-11-26 05:42:45,223 | INFO     | sum of square deviations: 48286189192.47577
[2025-11-26 00:43:17] 2025-11-26 05:42:45,229 | INFO     | sum of deviations: 862785104065.1819
[2025-11-26 00:43:17] 2025-11-26 05:42:45,229 | INFO     | mean x: 1764119065.5613382
[2025-11-26 00:43:17] 2025-11-26 05:42:45,229 | INFO     | mean y: 3442778.191449814
[2025-11-26 00:43:17] 2025-11-26 05:42:45,230 | INFO     | intersect: -31518109802.74584
[2025-11-26 00:43:17] 2025-11-26 05:42:45,230 | INFO     | chi2: 3.4008293152339326
[2025-11-26 00:43:17] 2025-11-26 05:42:45,230 | INFO     | current chi2=3.4008293152339326 (change=48.22030599096747 %)
[2025-11-26 00:43:17] 2025-11-26 05:42:45,231 | INFO     | sum of square deviations: 46952397504.956955
[2025-11-26 00:43:17] 2025-11-26 05:42:45,237 | INFO     | sum of deviations: 946843420053.8887
[2025-11-26 00:43:17] 2025-11-26 05:42:45,237 | INFO     | mean x: 1764118913.0619137
[2025-11-26 00:43:17] 2025-11-26 05:42:45,237 | INFO     | mean y: 3452370.6397748594
[2025-11-26 00:43:17] 2025-11-26 05:42:45,237 | INFO     | intersect: -35571821178.46804
[2025-11-26 00:43:17] 2025-11-26 05:42:45,238 | INFO     | chi2: 2.7196323241476184
[2025-11-26 00:43:17] 2025-11-26 05:42:45,238 | INFO     | current chi2=2.7196323241476184 (change=20.03031989976412 %)
[2025-11-26 00:43:17] 2025-11-26 05:42:45,238 | INFO     | right removable region: 532
[2025-11-26 00:43:17] 2025-11-26 05:42:45,239 | INFO     | sum of square deviations: 48286169062.47577
[2025-11-26 00:43:17] 2025-11-26 05:42:45,245 | INFO     | sum of deviations: 462606204324.3718
[2025-11-26 00:43:17] 2025-11-26 05:42:45,245 | INFO     | mean x: 1764119370.5613382
[2025-11-26 00:43:17] 2025-11-26 05:42:45,245 | INFO     | mean y: 3439706.594795539
[2025-11-26 00:43:17] 2025-11-26 05:42:45,245 | INFO     | intersect: -16897726441.719173
[2025-11-26 00:43:17] 2025-11-26 05:42:45,246 | INFO     | chi2: 4.121926394069309
[2025-11-26 00:43:17] 2025-11-26 05:42:45,246 | INFO     | current chi2=4.121926394069309 (change=37.241164542836714 %)
[2025-11-26 00:43:17] 2025-11-26 05:42:45,246 | INFO     | sum of square deviations: 46952357244.95695
[2025-11-26 00:43:17] 2025-11-26 05:42:45,252 | INFO     | sum of deviations: 416143568294.1428
[2025-11-26 00:43:17] 2025-11-26 05:42:45,252 | INFO     | mean x: 1764119523.0619137
[2025-11-26 00:43:17] 2025-11-26 05:42:45,252 | INFO     | mean y: 3445017.0562851783
[2025-11-26 00:43:17] 2025-11-26 05:42:45,252 | INFO     | intersect: -15632127642.145977
[2025-11-26 00:43:17] 2025-11-26 05:42:45,253 | INFO     | chi2: 4.057486980079603
[2025-11-26 00:43:17] 2025-11-26 05:42:45,253 | INFO     | current chi2=4.057486980079603 (change=1.563332476834671 %)
[2025-11-26 00:43:17] 2025-11-26 05:42:45,253 | INFO     | left removable region: 20
[2025-11-26 00:43:17] 2025-11-26 05:42:45,254 | INFO     | sum of square deviations: 41618434650.0
[2025-11-26 00:43:17] 2025-11-26 05:42:45,259 | INFO     | sum of deviations: 641767625490.875
[2025-11-26 00:43:17] 2025-11-26 05:42:45,259 | INFO     | mean x: 1764119492.5625
[2025-11-26 00:43:17] 2025-11-26 05:42:45,259 | INFO     | mean y: 3489696.66015625
[2025-11-26 00:43:17] 2025-11-26 05:42:45,259 | INFO     | intersect: -27199714540.71985
[2025-11-26 00:43:17] 2025-11-26 05:42:45,260 | INFO     | chi2: 0.09580129145811818
[2025-11-26 00:43:17] 2025-11-26 05:42:45,260 | INFO     | current memory leak: 15.42 B/s (using 512 data points, chi2=0.10)
[2025-11-26 00:43:17] 2025-11-26 05:42:45,261 | INFO     | could have reported an average CPU frequency of 2393 MHz (22 samples)
[2025-11-26 00:43:17] 2025-11-26 05:42:45,261 | INFO     | ..............................
[2025-11-26 00:43:17] 2025-11-26 05:42:45,261 | INFO     | . Timing measurements:
[2025-11-26 00:43:17] 2025-11-26 05:42:45,261 | INFO     | . get job = 0 s
[2025-11-26 00:43:17] 2025-11-26 05:42:45,261 | INFO     | . initial setup = 2 s
[2025-11-26 00:43:17] 2025-11-26 05:42:45,261 | INFO     | . payload setup = 8 s
[2025-11-26 00:43:17] 2025-11-26 05:42:45,261 | INFO     | . stage-in = 0 s
[2025-11-26 00:43:17] 2025-11-26 05:42:45,261 | INFO     | . payload execution = 33068 s
[2025-11-26 00:43:17] 2025-11-26 05:42:45,261 | INFO     | . stage-out = 3 s
[2025-11-26 00:43:17] 2025-11-26 05:42:45,262 | INFO     | . log creation = 0 s
[2025-11-26 00:43:17] 2025-11-26 05:42:45,262 | INFO     | ..............................
[2025-11-26 00:43:17] 2025-11-26 05:42:45,342 | INFO     | 
[2025-11-26 00:43:17] 2025-11-26 05:42:45,342 | INFO     | job summary report
[2025-11-26 00:43:17] 2025-11-26 05:42:45,342 | INFO     | --------------------------------------------------
[2025-11-26 00:43:17] 2025-11-26 05:42:45,343 | INFO     | PanDA job id: 6895559879
[2025-11-26 00:43:17] 2025-11-26 05:42:45,343 | INFO     | task id: 47556149
[2025-11-26 00:43:17] 2025-11-26 05:42:45,343 | INFO     | errors: (none)
[2025-11-26 00:43:17] 2025-11-26 05:42:45,343 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:43:17] 2025-11-26 05:42:45,343 | INFO     | pilot state: finished 
[2025-11-26 00:43:17] 2025-11-26 05:42:45,343 | INFO     | transexitcode: 0
[2025-11-26 00:43:17] 2025-11-26 05:42:45,344 | INFO     | exeerrorcode: 0
[2025-11-26 00:43:17] 2025-11-26 05:42:45,344 | INFO     | exeerrordiag: 
[2025-11-26 00:43:17] 2025-11-26 05:42:45,344 | INFO     | exitcode: 0
[2025-11-26 00:43:17] 2025-11-26 05:42:45,344 | INFO     | exitmsg: OK
[2025-11-26 00:43:17] 2025-11-26 05:42:45,344 | INFO     | cpuconsumptiontime: 319443 s
[2025-11-26 00:43:17] 2025-11-26 05:42:45,344 | INFO     | nevents: 1000
[2025-11-26 00:43:17] 2025-11-26 05:42:45,345 | INFO     | neventsw: 0
[2025-11-26 00:43:17] 2025-11-26 05:42:45,345 | INFO     | pid: 7385
[2025-11-26 00:43:17] 2025-11-26 05:42:45,345 | INFO     | pgrp: 7385
[2025-11-26 00:43:17] 2025-11-26 05:42:45,345 | INFO     | corecount: 12
[2025-11-26 00:43:17] 2025-11-26 05:42:45,345 | INFO     | event service: False
[2025-11-26 00:43:17] 2025-11-26 05:42:45,346 | INFO     | sizes: {0: 2284143, 1: 2284342, 6: 2284604, 11: 2284632, 33079: 2325400, 33080: 2325399, 33084: 2334577, 33086: 2334633, 33091: 2334879}
[2025-11-26 00:43:17] 2025-11-26 05:42:45,346 | INFO     | --------------------------------------------------
[2025-11-26 00:43:17] 2025-11-26 05:42:45,346 | INFO     | 
[2025-11-26 00:43:17] 2025-11-26 05:42:45,346 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 00:43:17] 2025-11-26 05:42:45,369 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,370 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,370 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,370 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,372 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,372 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,372 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,372 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:43:17] 2025-11-26 05:42:45,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,373 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:43:17] 2025-11-26 05:42:45,373 | INFO     | job 6895559879 has completed (purged errors)
[2025-11-26 00:43:17] 2025-11-26 05:42:45,373 | INFO     | overall cleanup function is called
[2025-11-26 00:43:17] 2025-11-26 05:42:46,390 | INFO     | --- collectZombieJob: --- 10, [7385]
[2025-11-26 00:43:17] 2025-11-26 05:42:46,390 | INFO     | zombie collector waiting for pid 7385
[2025-11-26 00:43:17] 2025-11-26 05:42:46,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:43:17] 2025-11-26 05:42:46,390 | INFO     | collected zombie processes
[2025-11-26 00:43:17] 2025-11-26 05:42:46,390 | INFO     | will attempt to kill all subprocesses of pid=7385
[2025-11-26 00:43:17] 2025-11-26 05:42:46,484 | INFO     | process IDs to be killed: [7385] (in reverse order)
[2025-11-26 00:43:17] 2025-11-26 05:42:46,533 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:43:17] 2025-11-26 05:42:46,534 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:43:17] 2025-11-26 05:42:46,537 | INFO     | did not find any defunct processes belonging to 7385
[2025-11-26 00:43:17] 2025-11-26 05:42:46,539 | INFO     | did not find any defunct processes belonging to 7385
[2025-11-26 00:43:17] 2025-11-26 05:42:46,541 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:43:17] 2025-11-26 05:42:46,541 | INFO     | ready for new job
[2025-11-26 00:43:17] 2025-11-26 05:42:46,541 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:43:17] 2025-11-26 05:42:46,543 | INFO     | ***************************************
[2025-11-26 00:43:17] 2025-11-26 05:42:46,544 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:43:17] 2025-11-26 05:42:46,544 | INFO     | ***************************************
[2025-11-26 00:43:17] 2025-11-26 05:42:46,544 | INFO     | 
[2025-11-26 00:43:17] 2025-11-26 05:42:46,544 | INFO     | architecture information:
[2025-11-26 00:43:17] 2025-11-26 05:42:46,545 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:43:17] 2025-11-26 05:42:46,560 | INFO     | cat /etc/os-release:
[2025-11-26 00:43:17] NAME="CentOS Linux"
[2025-11-26 00:43:17] VERSION="7 (Core)"
[2025-11-26 00:43:17] ID="centos"
[2025-11-26 00:43:17] ID_LIKE="rhel fedora"
[2025-11-26 00:43:17] VERSION_ID="7"
[2025-11-26 00:43:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:43:17] ANSI_COLOR="0;31"
[2025-11-26 00:43:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:43:17] HOME_URL="https://www.centos.org/"
[2025-11-26 00:43:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:43:17] 
[2025-11-26 00:43:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:43:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:43:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:43:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:43:17] 
[2025-11-26 00:43:17] 2025-11-26 05:42:46,560 | INFO     | ***************************************
[2025-11-26 00:43:17] 2025-11-26 05:42:47,063 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 00:43:17] 2025-11-26 05:42:47,079 | INFO     | sufficient remaining disk space (28249686016 B)
[2025-11-26 00:43:17] 2025-11-26 05:42:47,079 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:43:17] 2025-11-26 05:42:47,080 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:43:17] 2025-11-26 05:42:47,080 | INFO     | update_server=False
[2025-11-26 00:43:17] 2025-11-26 05:42:47,080 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:43:17] 2025-11-26 05:42:47,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:43:17] 2025-11-26 05:42:47,242 | INFO     | all data control threads have been joined
[2025-11-26 00:43:17] 2025-11-26 05:42:47,627 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:43:17] 2025-11-26 05:42:48,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:43:17] 2025-11-26 05:42:48,067 | INFO     | aborting loop
[2025-11-26 00:43:17] 2025-11-26 05:42:48,086 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:48,086 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:48,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:43:17] 2025-11-26 05:42:48,239 | INFO     | all job control threads have been joined
[2025-11-26 00:43:17] 2025-11-26 05:42:48,247 | INFO     | [data] control thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:48,248 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:48,279 | INFO     | all payload control threads have been joined
[2025-11-26 00:43:17] 2025-11-26 05:42:48,641 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:48,789 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:48,934 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:48,949 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:49,072 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:49,245 | INFO     | [job] control thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:49,247 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:49,284 | INFO     | [payload] control thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:49,432 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:49,485 | INFO     | [job] validate thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:50,114 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:50,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:43:17] 2025-11-26 05:42:54,356 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:43:17] 2025-11-26 05:42:55,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395243497280)>', '<ExcThread(monitor, started 140394805315328)>']
[2025-11-26 00:43:17] 2025-11-26 05:43:00,795 | INFO     | all workflow threads have been joined
[2025-11-26 00:43:17] 2025-11-26 05:43:00,796 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:43:17] 2025-11-26 05:43:00,796 | INFO     | traces error code: 0
[2025-11-26 00:43:17] 2025-11-26 05:43:00,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:43:17] 2025-11-26 05:43:16,750 | INFO     | PID=775 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-11-26 00:43:17] 2025-11-26 05:43:16,750 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:43:17] 2025-11-26 05:43:16,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:43:17] 2025-11-26 05:43:16,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:43:17] 2025-11-26 05:43:16,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:43:17] 2025-11-26 05:43:16,751 | INFO     | [monitor] control thread has ended
[2025-11-26 00:43:17] 2025-11-26 05:43:16,848 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:43:17] 2025-11-26 05:43:16,852 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:43:17] 2025-11-26 05:43:16,856 [wrapper] pilotpid: 775
[2025-11-26 00:43:17] 2025-11-26 05:43:16,860 [wrapper] Pilot exit status: 0
[2025-11-26 00:43:17] 2025-11-26 05:43:16,875 [wrapper] pandaids: 6895559879
[2025-11-26 00:43:17] 2025-11-26 05:43:16,915 [wrapper] cleanup supervisor_pilot 13848 776
[2025-11-26 00:43:17] 2025-11-26 05:43:16,919 [wrapper] Test setup, not cleaning
[2025-11-26 00:43:17] 2025-11-26 05:43:16,924 [wrapper] apfmon messages muted
[2025-11-26 00:43:17] 2025-11-26 05:43:16,928 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:43:17] 2025-11-26 05:43:16,932 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:43:17]  *** Error codes and diagnostics ***
[2025-11-26 00:43:17]     "exeErrorCode": 0,
[2025-11-26 00:43:17]     "exeErrorDiag": "",
[2025-11-26 00:43:17]     "pilotErrorCode": 0,
[2025-11-26 00:43:17]     "pilotErrorDiag": "",
[2025-11-26 00:43:17]  *** Listing of results directory ***
[2025-11-26 00:43:17] total 1312188
[2025-11-26 00:43:17] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 05:13 pilot3.tar.gz
[2025-11-26 00:43:17] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 06:06 queuedata.json
[2025-11-26 00:43:17] -rwx------ 1 boincer umatlas     36292 Nov 24 06:09 runpilot2-wrapper.sh
[2025-11-26 00:43:17] -rw-r--r-- 1 boincer umatlas       100 Nov 25 15:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:43:17] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 15:30 run_atlas
[2025-11-26 00:43:17] -rw-r--r-- 1 boincer umatlas       105 Nov 25 15:30 job.xml
[2025-11-26 00:43:17] -rw-r--r-- 2 boincer umatlas 410948673 Nov 25 15:30 EVNT.47483658._001319.pool.root.1
[2025-11-26 00:43:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 15:30 start_atlas.sh
[2025-11-26 00:43:17] drwxrwx--x 2 boincer umatlas      4096 Nov 25 15:30 shared
[2025-11-26 00:43:17] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 15:30 input.tar.gz
[2025-11-26 00:43:17] -rw-r--r-- 1 boincer umatlas         0 Nov 25 15:30 boinc_lockfile
[2025-11-26 00:43:17] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 15:30 pandaJob.out
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas        57 Nov 25 15:30 setup.sh.local
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas    991893 Nov 25 15:30 agis_schedconf.cvmfs.json
[2025-11-26 00:43:17] drwx------ 5 boincer umatlas      4096 Nov 25 15:30 pilot3
[2025-11-26 00:43:17] -rw-r--r-- 1 boincer umatlas       533 Nov 26 00:31 boinc_task_state.xml
[2025-11-26 00:43:17] -rw-r--r-- 1 boincer umatlas      5956 Nov 26 00:37 init_data.xml
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas 914985413 Nov 26 00:42 HITS.47556149._003054.pool.root.1
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas      1061 Nov 26 00:42 memory_monitor_summary.json
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas   1516240 Nov 26 00:42 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas   2280119 Nov 26 00:42 log.47556149._003054.job.log.tgz.1
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas      8666 Nov 26 00:42 heartbeat.json
[2025-11-26 00:43:17] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 00:43 boinc_mmap_file
[2025-11-26 00:43:17] -rw-r--r-- 1 boincer umatlas        29 Nov 26 00:43 wrapper_checkpoint.txt
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas        95 Nov 26 00:43 pilot_heartbeat.json
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas       743 Nov 26 00:43 pilotlog.txt
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas   4634895 Nov 26 00:43 log.47556149._003054.job.log.1
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas       353 Nov 26 00:43 output.list
[2025-11-26 00:43:17] -rw-r--r-- 1 boincer umatlas       620 Nov 26 00:43 runtime_log
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas   6932480 Nov 26 00:43 result.tar.gz
[2025-11-26 00:43:17] -rw-r--r-- 1 boincer umatlas      9345 Nov 26 00:43 runtime_log.err
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas       670 Nov 26 00:43 HHtLDmecjh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCdLKDmLbuiQm.diag
[2025-11-26 00:43:17] -rw-r--r-- 1 boincer umatlas     21334 Nov 26 00:43 stderr.txt
[2025-11-26 00:43:17] HITS file was successfully produced:
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas 914985413 Nov 26 00:42 shared/HITS.pool.root.1
[2025-11-26 00:43:17]  *** Contents of shared directory: ***
[2025-11-26 00:43:17] total 1302236
[2025-11-26 00:43:17] -rw-r--r-- 2 boincer umatlas 410948673 Nov 25 15:30 ATLAS.root_0
[2025-11-26 00:43:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 15:30 start_atlas.sh
[2025-11-26 00:43:17] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 15:30 input.tar.gz
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas 914985413 Nov 26 00:42 HITS.pool.root.1
[2025-11-26 00:43:17] -rw------- 1 boincer umatlas   6932480 Nov 26 00:43 result.tar.gz
00:43:18 (29438): run_atlas exited; CPU time 308199.711729
00:43:18 (29438): called boinc_finish(0)

</stderr_txt>
]]>

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