Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:47:14 (23461): wrapper (7.7.26015): starting
15:47:14 (23461): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 15:47:14] Arguments: --nthreads 8
[2025-11-25 15:47:14] Threads: 8
[2025-11-25 15:47:14] Checking for CVMFS
[2025-11-25 15:47:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 15:47:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 15:47:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 15:47:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 15:47:15] 2.11.2.0 2827 42137 80944 153297 0 81 17913524 20275201 1 130560 0 5315008 99.547 2891043 29992 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 15:47:15] CVMFS is ok
[2025-11-25 15:47:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 15:47:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 15:47:15] Further information can be found at the LHC@home message board.
[2025-11-25 15:47:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 15:47:15] Checking for apptainer binary...
[2025-11-25 15:47:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 15:47:15] Running /usr/bin/apptainer --version
[2025-11-25 15:47:15] apptainer version 1.3.2-1.el7
[2025-11-25 15:47:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 15:47:16] c-204-30.aglt2.org
[2025-11-25 15:47:16] apptainer works
[2025-11-25 15:47:16] Set ATHENA_PROC_NUMBER=8
[2025-11-25 15:47:16] Set ATHENA_CORE_NUMBER=8
[2025-11-25 15:47:16] Starting ATLAS job with PandaID=6892548574
[2025-11-25 15:47:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 04:02:01]  *** The last 200 lines of the pilot log: ***
[2025-11-26 04:02:01] 2025-11-26 09:01:26,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:02:01] 2025-11-26 09:01:28,188 | INFO     | time since job start (44035s) is within the limit (172800.0s)
[2025-11-26 04:02:01] 2025-11-26 09:01:29,328 | INFO     | monitor loop #3238: job 0:6892548574 is in state 'finished'
[2025-11-26 04:02:01] 2025-11-26 09:01:29,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:02:01] 2025-11-26 09:01:29,865 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 04:02:01] 2025-11-26 09:01:29,871 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-26 04:02:01] 2025-11-26 09:01:29,874 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6892548574/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 04:02:01] 2025-11-26 09:01:29,875 | INFO     | extracted standard info from prmon json
[2025-11-26 04:02:01] 2025-11-26 09:01:29,876 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 04:02:01] 2025-11-26 09:01:29,876 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 04:02:01] 2025-11-26 09:01:29,889 | INFO     | fitting pss+swap vs Time
[2025-11-26 04:02:01] 2025-11-26 09:01:29,890 | INFO     | sum of square deviations: 116704569888.22693
[2025-11-26 04:02:01] 2025-11-26 09:01:29,900 | INFO     | sum of deviations: 714398459095.6925
[2025-11-26 04:02:01] 2025-11-26 09:01:29,901 | INFO     | mean x: 1764125677.1163435
[2025-11-26 04:02:01] 2025-11-26 09:01:29,901 | INFO     | mean y: 3205629.6108033243
[2025-11-26 04:02:01] 2025-11-26 09:01:29,901 | INFO     | intersect: -10795760225.711697
[2025-11-26 04:02:01] 2025-11-26 09:01:29,902 | INFO     | chi2: 6.765003951078079
[2025-11-26 04:02:01] 2025-11-26 09:01:29,903 | INFO     | sum of square deviations: 114296837208.81464
[2025-11-26 04:02:01] 2025-11-26 09:01:29,913 | INFO     | sum of deviations: 1007964738750.2782
[2025-11-26 04:02:01] 2025-11-26 09:01:29,913 | INFO     | mean x: 1764125524.6206415
[2025-11-26 04:02:01] 2025-11-26 09:01:29,914 | INFO     | mean y: 3224224.048814505
[2025-11-26 04:02:01] 2025-11-26 09:01:29,914 | INFO     | intersect: -15554304461.528921
[2025-11-26 04:02:01] 2025-11-26 09:01:29,914 | INFO     | chi2: 3.1264134426465144
[2025-11-26 04:02:01] 2025-11-26 09:01:29,915 | INFO     | current chi2=3.1264134426465144 (change=53.78548977568172 %)
[2025-11-26 04:02:01] 2025-11-26 09:01:29,915 | INFO     | sum of square deviations: 111922453991.875
[2025-11-26 04:02:01] 2025-11-26 09:01:29,926 | INFO     | sum of deviations: 1104139668133.0005
[2025-11-26 04:02:01] 2025-11-26 09:01:29,926 | INFO     | mean x: 1764125372.125
[2025-11-26 04:02:01] 2025-11-26 09:01:29,926 | INFO     | mean y: 3230396.617977528
[2025-11-26 04:02:01] 2025-11-26 09:01:29,926 | INFO     | intersect: -17400255083.288555
[2025-11-26 04:02:01] 2025-11-26 09:01:29,927 | INFO     | chi2: 2.6213975193999537
[2025-11-26 04:02:01] 2025-11-26 09:01:29,927 | INFO     | current chi2=2.6213975193999537 (change=16.153203423379086 %)
[2025-11-26 04:02:01] 2025-11-26 09:01:29,927 | INFO     | right removable region: 711
[2025-11-26 04:02:01] 2025-11-26 09:01:29,928 | INFO     | sum of square deviations: 114296565758.81453
[2025-11-26 04:02:01] 2025-11-26 09:01:29,939 | INFO     | sum of deviations: 489408569039.9456
[2025-11-26 04:02:01] 2025-11-26 09:01:29,939 | INFO     | mean x: 1764125829.6206415
[2025-11-26 04:02:01] 2025-11-26 09:01:29,939 | INFO     | mean y: 3219853.422594142
[2025-11-26 04:02:01] 2025-11-26 09:01:29,939 | INFO     | intersect: -7550623012.713228
[2025-11-26 04:02:01] 2025-11-26 09:01:29,940 | INFO     | chi2: 4.37226834126857
[2025-11-26 04:02:01] 2025-11-26 09:01:29,940 | INFO     | current chi2=4.37226834126857 (change=35.36931577738694 %)
[2025-11-26 04:02:01] 2025-11-26 09:01:29,941 | INFO     | sum of square deviations: 111921998810.36917
[2025-11-26 04:02:01] 2025-11-26 09:01:29,951 | INFO     | sum of deviations: 447483159096.9474
[2025-11-26 04:02:01] 2025-11-26 09:01:29,951 | INFO     | mean x: 1764125982.122191
[2025-11-26 04:02:01] 2025-11-26 09:01:29,951 | INFO     | mean y: 3222544.5983146066
[2025-11-26 04:02:01] 2025-11-26 09:01:29,952 | INFO     | intersect: -7050052735.648972
[2025-11-26 04:02:01] 2025-11-26 09:01:29,952 | INFO     | chi2: 4.337261211692936
[2025-11-26 04:02:01] 2025-11-26 09:01:29,952 | INFO     | current chi2=4.337261211692936 (change=0.8006628789274411 %)
[2025-11-26 04:02:01] 2025-11-26 09:01:29,953 | INFO     | left removable region: 20
[2025-11-26 04:02:01] 2025-11-26 09:01:29,953 | INFO     | sum of square deviations: 102308401549.67
[2025-11-26 04:02:01] 2025-11-26 09:01:29,963 | INFO     | sum of deviations: 800371203476.2244
[2025-11-26 04:02:01] 2025-11-26 09:01:29,963 | INFO     | mean x: 1764125951.6266282
[2025-11-26 04:02:01] 2025-11-26 09:01:29,963 | INFO     | mean y: 3251846.911722142
[2025-11-26 04:02:01] 2025-11-26 09:01:29,963 | INFO     | intersect: -13797722360.485601
[2025-11-26 04:02:01] 2025-11-26 09:01:29,964 | INFO     | chi2: 0.1095258624067037
[2025-11-26 04:02:01] 2025-11-26 09:01:29,964 | INFO     | current memory leak: 7.82 B/s (using 691 data points, chi2=0.11)
[2025-11-26 04:02:01] 2025-11-26 09:01:29,965 | INFO     | could have reported an average CPU frequency of 2155 MHz (28 samples)
[2025-11-26 04:02:01] 2025-11-26 09:01:29,965 | INFO     | ..............................
[2025-11-26 04:02:01] 2025-11-26 09:01:29,965 | INFO     | . Timing measurements:
[2025-11-26 04:02:01] 2025-11-26 09:01:29,965 | INFO     | . get job = 0 s
[2025-11-26 04:02:01] 2025-11-26 09:01:29,965 | INFO     | . initial setup = 2 s
[2025-11-26 04:02:01] 2025-11-26 09:01:29,966 | INFO     | . payload setup = 8 s
[2025-11-26 04:02:01] 2025-11-26 09:01:29,966 | INFO     | . stage-in = 0 s
[2025-11-26 04:02:01] 2025-11-26 09:01:29,966 | INFO     | . payload execution = 43995 s
[2025-11-26 04:02:01] 2025-11-26 09:01:29,966 | INFO     | . stage-out = 3 s
[2025-11-26 04:02:01] 2025-11-26 09:01:29,966 | INFO     | . log creation = 0 s
[2025-11-26 04:02:01] 2025-11-26 09:01:29,966 | INFO     | ..............................
[2025-11-26 04:02:01] 2025-11-26 09:01:30,060 | INFO     | 
[2025-11-26 04:02:01] 2025-11-26 09:01:30,060 | INFO     | job summary report
[2025-11-26 04:02:01] 2025-11-26 09:01:30,060 | INFO     | --------------------------------------------------
[2025-11-26 04:02:01] 2025-11-26 09:01:30,060 | INFO     | PanDA job id: 6892548574
[2025-11-26 04:02:01] 2025-11-26 09:01:30,060 | INFO     | task id: 47493029
[2025-11-26 04:02:01] 2025-11-26 09:01:30,060 | INFO     | errors: (none)
[2025-11-26 04:02:01] 2025-11-26 09:01:30,060 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 04:02:01] 2025-11-26 09:01:30,061 | INFO     | pilot state: finished 
[2025-11-26 04:02:01] 2025-11-26 09:01:30,061 | INFO     | transexitcode: 0
[2025-11-26 04:02:01] 2025-11-26 09:01:30,061 | INFO     | exeerrorcode: 0
[2025-11-26 04:02:01] 2025-11-26 09:01:30,061 | INFO     | exeerrordiag: 
[2025-11-26 04:02:01] 2025-11-26 09:01:30,061 | INFO     | exitcode: 0
[2025-11-26 04:02:01] 2025-11-26 09:01:30,061 | INFO     | exitmsg: OK
[2025-11-26 04:02:01] 2025-11-26 09:01:30,061 | INFO     | cpuconsumptiontime: 341528 s
[2025-11-26 04:02:01] 2025-11-26 09:01:30,061 | INFO     | nevents: 1000
[2025-11-26 04:02:01] 2025-11-26 09:01:30,062 | INFO     | neventsw: 0
[2025-11-26 04:02:01] 2025-11-26 09:01:30,062 | INFO     | pid: 1131
[2025-11-26 04:02:01] 2025-11-26 09:01:30,062 | INFO     | pgrp: 1131
[2025-11-26 04:02:01] 2025-11-26 09:01:30,062 | INFO     | corecount: 8
[2025-11-26 04:02:01] 2025-11-26 09:01:30,062 | INFO     | event service: False
[2025-11-26 04:02:01] 2025-11-26 09:01:30,062 | INFO     | sizes: {0: 2284133, 1: 2284332, 7: 2284594, 12: 2284622, 44008: 2330228, 44012: 2339222, 44013: 2339406, 44019: 2339652}
[2025-11-26 04:02:01] 2025-11-26 09:01:30,063 | INFO     | --------------------------------------------------
[2025-11-26 04:02:01] 2025-11-26 09:01:30,063 | INFO     | 
[2025-11-26 04:02:01] 2025-11-26 09:01:30,063 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 04:02:01] 2025-11-26 09:01:30,094 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,095 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,095 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,095 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,096 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,096 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,097 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,097 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,098 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,098 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 04:02:01] 2025-11-26 09:01:30,098 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,098 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 04:02:01] 2025-11-26 09:01:30,099 | INFO     | job 6892548574 has completed (purged errors)
[2025-11-26 04:02:01] 2025-11-26 09:01:30,099 | INFO     | overall cleanup function is called
[2025-11-26 04:02:01] 2025-11-26 09:01:31,115 | INFO     | --- collectZombieJob: --- 10, [1131]
[2025-11-26 04:02:01] 2025-11-26 09:01:31,115 | INFO     | zombie collector waiting for pid 1131
[2025-11-26 04:02:01] 2025-11-26 09:01:31,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 04:02:01] 2025-11-26 09:01:31,116 | INFO     | collected zombie processes
[2025-11-26 04:02:01] 2025-11-26 09:01:31,116 | INFO     | will attempt to kill all subprocesses of pid=1131
[2025-11-26 04:02:01] 2025-11-26 09:01:31,212 | INFO     | process IDs to be killed: [1131] (in reverse order)
[2025-11-26 04:02:01] 2025-11-26 09:01:31,337 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 04:02:01] 2025-11-26 09:01:31,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 04:02:01] 2025-11-26 09:01:31,341 | INFO     | did not find any defunct processes belonging to 1131
[2025-11-26 04:02:01] 2025-11-26 09:01:31,345 | INFO     | did not find any defunct processes belonging to 1131
[2025-11-26 04:02:01] 2025-11-26 09:01:31,348 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 04:02:01] 2025-11-26 09:01:31,348 | INFO     | ready for new job
[2025-11-26 04:02:01] 2025-11-26 09:01:31,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 04:02:01] 2025-11-26 09:01:31,352 | INFO     | ***************************************
[2025-11-26 04:02:01] 2025-11-26 09:01:31,352 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 04:02:01] 2025-11-26 09:01:31,352 | INFO     | ***************************************
[2025-11-26 04:02:01] 2025-11-26 09:01:31,353 | INFO     | 
[2025-11-26 04:02:01] 2025-11-26 09:01:31,353 | INFO     | architecture information:
[2025-11-26 04:02:01] 2025-11-26 09:01:31,354 | INFO     | executing command: cat /etc/os-release
[2025-11-26 04:02:01] 2025-11-26 09:01:31,372 | INFO     | cat /etc/os-release:
[2025-11-26 04:02:01] NAME="CentOS Linux"
[2025-11-26 04:02:01] VERSION="7 (Core)"
[2025-11-26 04:02:01] ID="centos"
[2025-11-26 04:02:01] ID_LIKE="rhel fedora"
[2025-11-26 04:02:01] VERSION_ID="7"
[2025-11-26 04:02:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 04:02:01] ANSI_COLOR="0;31"
[2025-11-26 04:02:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 04:02:01] HOME_URL="https://www.centos.org/"
[2025-11-26 04:02:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 04:02:01] 
[2025-11-26 04:02:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 04:02:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 04:02:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 04:02:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 04:02:01] 
[2025-11-26 04:02:01] 2025-11-26 09:01:31,373 | INFO     | ***************************************
[2025-11-26 04:02:01] 2025-11-26 09:01:31,876 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 04:02:01] 2025-11-26 09:01:31,896 | INFO     | sufficient remaining disk space (17447256064 B)
[2025-11-26 04:02:01] 2025-11-26 09:01:31,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 04:02:01] 2025-11-26 09:01:31,897 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 04:02:01] 2025-11-26 09:01:31,897 | INFO     | update_server=False
[2025-11-26 04:02:01] 2025-11-26 09:01:31,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 04:02:01] 2025-11-26 09:01:31,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:02:01] 2025-11-26 09:01:31,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 04:02:01] 2025-11-26 09:01:31,921 | INFO     | all data control threads have been joined
[2025-11-26 04:02:01] 2025-11-26 09:01:32,832 | INFO     | all payload control threads have been joined
[2025-11-26 04:02:01] 2025-11-26 09:01:32,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:02:01] 2025-11-26 09:01:32,847 | INFO     | aborting loop
[2025-11-26 04:02:01] 2025-11-26 09:01:32,900 | INFO     | [job] queue monitor thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:32,903 | INFO     | [job] retrieve thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:32,904 | INFO     | [payload] validate_post thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:32,927 | INFO     | [data] control thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:32,975 | INFO     | [payload] failed_post thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:32,984 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:33,032 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:33,347 | INFO     | all job control threads have been joined
[2025-11-26 04:02:01] 2025-11-26 09:01:33,491 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:33,520 | INFO     | [data] copytool_in thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:33,835 | INFO     | [payload] control thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:33,848 | INFO     | [job] job monitor thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:33,899 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:33,904 | INFO     | [data] copytool_out thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:34,352 | INFO     | [job] control thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:34,381 | INFO     | [job] validate thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:34,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 04:02:01] 2025-11-26 09:01:38,512 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 04:02:01] 2025-11-26 09:01:46,558 | INFO     | [monitor] cgroup control has ended
[2025-11-26 04:02:01] 2025-11-26 09:01:47,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140018956896064)>', '<ExcThread(monitor, started 140018517522176)>']
[2025-11-26 04:02:01] 2025-11-26 09:01:52,893 | INFO     | all workflow threads have been joined
[2025-11-26 04:02:01] 2025-11-26 09:01:52,894 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 04:02:01] 2025-11-26 09:01:52,894 | INFO     | traces error code: 0
[2025-11-26 04:02:01] 2025-11-26 09:01:52,895 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 04:02:01] 2025-11-26 09:02:01,409 | INFO     | PID=27128 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 04:02:01] 2025-11-26 09:02:01,410 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 04:02:01] 2025-11-26 09:02:01,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 04:02:01] 2025-11-26 09:02:01,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 04:02:01] 2025-11-26 09:02:01,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 04:02:01] 2025-11-26 09:02:01,411 | INFO     | [monitor] control thread has ended
[2025-11-26 04:02:01] 2025-11-26 09:02:01,529 [wrapper] ==== pilot stdout END ====
[2025-11-26 04:02:01] 2025-11-26 09:02:01,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 04:02:01] 2025-11-26 09:02:01,539 [wrapper] pilotpid: 27128
[2025-11-26 04:02:01] 2025-11-26 09:02:01,544 [wrapper] Pilot exit status: 0
[2025-11-26 04:02:01] 2025-11-26 09:02:01,560 [wrapper] pandaids: 6892548574
[2025-11-26 04:02:01] 2025-11-26 09:02:01,605 [wrapper] cleanup supervisor_pilot 26412 27129
[2025-11-26 04:02:01] 2025-11-26 09:02:01,610 [wrapper] Test setup, not cleaning
[2025-11-26 04:02:01] 2025-11-26 09:02:01,615 [wrapper] apfmon messages muted
[2025-11-26 04:02:01] 2025-11-26 09:02:01,620 [wrapper] ==== wrapper stdout END ====
[2025-11-26 04:02:01] 2025-11-26 09:02:01,624 [wrapper] ==== wrapper stderr END ====
[2025-11-26 04:02:01]  *** Error codes and diagnostics ***
[2025-11-26 04:02:01]     "exeErrorCode": 0,
[2025-11-26 04:02:01]     "exeErrorDiag": "",
[2025-11-26 04:02:01]     "pilotErrorCode": 0,
[2025-11-26 04:02:01]     "pilotErrorDiag": "",
[2025-11-26 04:02:01]  *** Listing of results directory ***
[2025-11-26 04:02:01] total 1305196
[2025-11-26 04:02:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 03:32 pilot3.tar.gz
[2025-11-26 04:02:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 03:39 queuedata.json
[2025-11-26 04:02:01] -rwx------ 1 boincer umatlas     36292 Nov 19 03:41 runpilot2-wrapper.sh
[2025-11-26 04:02:01] -rw-r--r-- 1 boincer umatlas       100 Nov 25 15:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 04:02:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 15:47 run_atlas
[2025-11-26 04:02:01] -rw-r--r-- 1 boincer umatlas       105 Nov 25 15:47 job.xml
[2025-11-26 04:02:01] -rw-r--r-- 2 boincer umatlas 407492638 Nov 25 15:47 EVNT.47493027._000333.pool.root.1
[2025-11-26 04:02:01] -rw-r--r-- 2 boincer umatlas     15120 Nov 25 15:47 start_atlas.sh
[2025-11-26 04:02:01] drwxrwx--x 2 boincer umatlas      4096 Nov 25 15:47 shared
[2025-11-26 04:02:01] -rw-r--r-- 2 boincer umatlas    590100 Nov 25 15:47 input.tar.gz
[2025-11-26 04:02:01] -rw-r--r-- 1 boincer umatlas         0 Nov 25 15:47 boinc_lockfile
[2025-11-26 04:02:01] -rw-r--r-- 1 boincer umatlas      2773 Nov 25 15:47 pandaJob.out
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas    991893 Nov 25 15:47 agis_schedconf.cvmfs.json
[2025-11-26 04:02:01] drwx------ 5 boincer umatlas      4096 Nov 25 15:47 pilot3
[2025-11-26 04:02:01] -rw-r--r-- 1 boincer umatlas       532 Nov 26 03:49 boinc_task_state.xml
[2025-11-26 04:02:01] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 04:00 init_data.xml
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas 909078266 Nov 26 04:00 HITS.47493029._003289.pool.root.1
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas      1064 Nov 26 04:01 memory_monitor_summary.json
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas   1516240 Nov 26 04:01 agis_ddmendpoints.agis.ALL.json
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas   1965715 Nov 26 04:01 log.47493029._003289.job.log.tgz.1
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas      8659 Nov 26 04:01 heartbeat.json
[2025-11-26 04:02:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 04:01 boinc_mmap_file
[2025-11-26 04:02:01] -rw-r--r-- 1 boincer umatlas        29 Nov 26 04:01 wrapper_checkpoint.txt
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas        95 Nov 26 04:02 pilot_heartbeat.json
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas       745 Nov 26 04:02 pilotlog.txt
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas   6054072 Nov 26 04:02 log.47493029._003289.job.log.1
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas       353 Nov 26 04:02 output.list
[2025-11-26 04:02:01] -rw-r--r-- 1 boincer umatlas       620 Nov 26 04:02 runtime_log
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas   8038400 Nov 26 04:02 result.tar.gz
[2025-11-26 04:02:01] -rw-r--r-- 1 boincer umatlas      8704 Nov 26 04:02 runtime_log.err
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas       668 Nov 26 04:02 EX3LDm9vsf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmy4GKDmGAaUin.diag
[2025-11-26 04:02:01] -rw-r--r-- 1 boincer umatlas     21316 Nov 26 04:02 stderr.txt
[2025-11-26 04:02:01] HITS file was successfully produced:
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas 909078266 Nov 26 04:00 shared/HITS.pool.root.1
[2025-11-26 04:02:01]  *** Contents of shared directory: ***
[2025-11-26 04:02:01] total 1294168
[2025-11-26 04:02:01] -rw-r--r-- 2 boincer umatlas 407492638 Nov 25 15:47 ATLAS.root_0
[2025-11-26 04:02:01] -rw-r--r-- 2 boincer umatlas     15120 Nov 25 15:47 start_atlas.sh
[2025-11-26 04:02:01] -rw-r--r-- 2 boincer umatlas    590100 Nov 25 15:47 input.tar.gz
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas 909078266 Nov 26 04:00 HITS.pool.root.1
[2025-11-26 04:02:01] -rw------- 1 boincer umatlas   8038400 Nov 26 04:02 result.tar.gz
04:02:02 (23461): run_atlas exited; CPU time 339341.057246
04:02:02 (23461): called boinc_finish(0)

</stderr_txt>
]]>

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