Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:16:37 (28891): wrapper (7.7.26015): starting
15:16:37 (28891): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 15:16:37] Arguments: --nthreads 8
[2025-11-25 15:16:37] Threads: 8
[2025-11-25 15:16:37] Checking for CVMFS
[2025-11-25 15:16:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 15:16:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 15:16:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 15:16:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 15:16:38] 2.11.2.0 2857 66664 87256 153295 0 82 18439387 20275201 1 130560 0 17721288 99.853 3767389 29622 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 15:16:38] CVMFS is ok
[2025-11-25 15:16:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 15:16:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 15:16:38] Further information can be found at the LHC@home message board.
[2025-11-25 15:16:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 15:16:38] Checking for apptainer binary...
[2025-11-25 15:16:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 15:16:38] Running /usr/bin/apptainer --version
[2025-11-25 15:16:38] apptainer version 1.3.2-1.el7
[2025-11-25 15:16:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 15:16:39] c-204-10.aglt2.org
[2025-11-25 15:16:39] apptainer works
[2025-11-25 15:16:39] Set ATHENA_PROC_NUMBER=8
[2025-11-25 15:16:39] Set ATHENA_CORE_NUMBER=8
[2025-11-25 15:16:39] Starting ATLAS job with PandaID=6895559308
[2025-11-25 15:16:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 03:54:35]  *** The last 200 lines of the pilot log: ***
[2025-11-26 03:54:35] 2025-11-26 08:53:59,530 | INFO     | time since job start (45421s) is within the limit (172800.0s)
[2025-11-26 03:54:35] 2025-11-26 08:54:01,536 | INFO     | time since job start (45423s) is within the limit (172800.0s)
[2025-11-26 03:54:35] 2025-11-26 08:54:01,557 | INFO     | monitor loop #3341: job 0:6895559308 is in state 'finished'
[2025-11-26 03:54:35] 2025-11-26 08:54:01,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:54:35] 2025-11-26 08:54:02,344 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 03:54:35] 2025-11-26 08:54:02,347 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-26 03:54:35] 2025-11-26 08:54:02,350 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895559308/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 03:54:35] 2025-11-26 08:54:02,350 | INFO     | extracted standard info from prmon json
[2025-11-26 03:54:35] 2025-11-26 08:54:02,350 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 03:54:35] 2025-11-26 08:54:02,351 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 03:54:35] 2025-11-26 08:54:02,363 | INFO     | fitting pss+swap vs Time
[2025-11-26 03:54:35] 2025-11-26 08:54:02,364 | INFO     | sum of square deviations: 127701738138.62224
[2025-11-26 03:54:35] 2025-11-26 08:54:02,375 | INFO     | sum of deviations: 909789160491.4956
[2025-11-26 03:54:35] 2025-11-26 08:54:02,375 | INFO     | mean x: 1764124512.0430107
[2025-11-26 03:54:35] 2025-11-26 08:54:02,375 | INFO     | mean y: 2871086.0470430106
[2025-11-26 03:54:35] 2025-11-26 08:54:02,376 | INFO     | intersect: -12565331839.052126
[2025-11-26 03:54:35] 2025-11-26 08:54:02,376 | INFO     | chi2: 5.23458645346306
[2025-11-26 03:54:35] 2025-11-26 08:54:02,377 | INFO     | sum of square deviations: 125144492477.13918
[2025-11-26 03:54:35] 2025-11-26 08:54:02,388 | INFO     | sum of deviations: 1137326868596.9482
[2025-11-26 03:54:35] 2025-11-26 08:54:02,389 | INFO     | mean x: 1764124359.5466847
[2025-11-26 03:54:35] 2025-11-26 08:54:02,389 | INFO     | mean y: 2884649.9580514207
[2025-11-26 03:54:35] 2025-11-26 08:54:02,389 | INFO     | intersect: -16029670949.92458
[2025-11-26 03:54:35] 2025-11-26 08:54:02,390 | INFO     | chi2: 2.496116440406705
[2025-11-26 03:54:35] 2025-11-26 08:54:02,390 | INFO     | current chi2=2.496116440406705 (change=52.31492568519253 %)
[2025-11-26 03:54:35] 2025-11-26 08:54:02,391 | INFO     | sum of square deviations: 122621574718.23428
[2025-11-26 03:54:35] 2025-11-26 08:54:02,404 | INFO     | sum of deviations: 1186823344700.8123
[2025-11-26 03:54:35] 2025-11-26 08:54:02,404 | INFO     | mean x: 1764124207.0490463
[2025-11-26 03:54:35] 2025-11-26 08:54:02,405 | INFO     | mean y: 2887633.0885558585
[2025-11-26 03:54:35] 2025-11-26 08:54:02,405 | INFO     | intersect: -17071626347.739286
[2025-11-26 03:54:35] 2025-11-26 08:54:02,406 | INFO     | chi2: 2.215191353074997
[2025-11-26 03:54:35] 2025-11-26 08:54:02,406 | INFO     | current chi2=2.215191353074997 (change=11.254486480844434 %)
[2025-11-26 03:54:35] 2025-11-26 08:54:02,406 | INFO     | right removable region: 733
[2025-11-26 03:54:35] 2025-11-26 08:54:02,408 | INFO     | sum of square deviations: 125144291177.23155
[2025-11-26 03:54:35] 2025-11-26 08:54:02,419 | INFO     | sum of deviations: 714589879229.7192
[2025-11-26 03:54:35] 2025-11-26 08:54:02,419 | INFO     | mean x: 1764124664.5453315
[2025-11-26 03:54:35] 2025-11-26 08:54:02,419 | INFO     | mean y: 2882706.9188092016
[2025-11-26 03:54:35] 2025-11-26 08:54:02,420 | INFO     | intersect: -10070494345.481424
[2025-11-26 03:54:35] 2025-11-26 08:54:02,420 | INFO     | chi2: 3.1929401149159045
[2025-11-26 03:54:35] 2025-11-26 08:54:02,421 | INFO     | current chi2=3.1929401149159045 (change=39.00301115853112 %)
[2025-11-26 03:54:35] 2025-11-26 08:54:02,421 | INFO     | sum of square deviations: 122621216953.3311
[2025-11-26 03:54:35] 2025-11-26 08:54:02,432 | INFO     | sum of deviations: 670533968721.6963
[2025-11-26 03:54:35] 2025-11-26 08:54:02,432 | INFO     | mean x: 1764124817.047684
[2025-11-26 03:54:35] 2025-11-26 08:54:02,433 | INFO     | mean y: 2885368.3801089916
[2025-11-26 03:54:35] 2025-11-26 08:54:02,433 | INFO     | intersect: -9643941210.951807
[2025-11-26 03:54:35] 2025-11-26 08:54:02,434 | INFO     | chi2: 3.152342760207607
[2025-11-26 03:54:35] 2025-11-26 08:54:02,434 | INFO     | current chi2=3.152342760207607 (change=1.2714724751224045 %)
[2025-11-26 03:54:35] 2025-11-26 08:54:02,434 | INFO     | left removable region: 20
[2025-11-26 03:54:35] 2025-11-26 08:54:02,435 | INFO     | sum of square deviations: 112394805365.94939
[2025-11-26 03:54:35] 2025-11-26 08:54:02,445 | INFO     | sum of deviations: 894902351620.1221
[2025-11-26 03:54:35] 2025-11-26 08:54:02,445 | INFO     | mean x: 1764124786.5568023
[2025-11-26 03:54:35] 2025-11-26 08:54:02,445 | INFO     | mean y: 2905299.7377279103
[2025-11-26 03:54:35] 2025-11-26 08:54:02,446 | INFO     | intersect: -14043290295.34188
[2025-11-26 03:54:35] 2025-11-26 08:54:02,446 | INFO     | chi2: 0.11283834983385176
[2025-11-26 03:54:35] 2025-11-26 08:54:02,447 | INFO     | current memory leak: 7.96 B/s (using 713 data points, chi2=0.11)
[2025-11-26 03:54:35] 2025-11-26 08:54:02,447 | INFO     | could have reported an average CPU frequency of 2168 MHz (28 samples)
[2025-11-26 03:54:35] 2025-11-26 08:54:02,447 | INFO     | ..............................
[2025-11-26 03:54:35] 2025-11-26 08:54:02,447 | INFO     | . Timing measurements:
[2025-11-26 03:54:35] 2025-11-26 08:54:02,447 | INFO     | . get job = 0 s
[2025-11-26 03:54:35] 2025-11-26 08:54:02,448 | INFO     | . initial setup = 2 s
[2025-11-26 03:54:35] 2025-11-26 08:54:02,448 | INFO     | . payload setup = 9 s
[2025-11-26 03:54:35] 2025-11-26 08:54:02,448 | INFO     | . stage-in = 0 s
[2025-11-26 03:54:35] 2025-11-26 08:54:02,448 | INFO     | . payload execution = 45380 s
[2025-11-26 03:54:35] 2025-11-26 08:54:02,448 | INFO     | . stage-out = 3 s
[2025-11-26 03:54:35] 2025-11-26 08:54:02,448 | INFO     | . log creation = 0 s
[2025-11-26 03:54:35] 2025-11-26 08:54:02,448 | INFO     | ..............................
[2025-11-26 03:54:35] 2025-11-26 08:54:02,538 | INFO     | 
[2025-11-26 03:54:35] 2025-11-26 08:54:02,538 | INFO     | job summary report
[2025-11-26 03:54:35] 2025-11-26 08:54:02,538 | INFO     | --------------------------------------------------
[2025-11-26 03:54:35] 2025-11-26 08:54:02,538 | INFO     | PanDA job id: 6895559308
[2025-11-26 03:54:35] 2025-11-26 08:54:02,538 | INFO     | task id: 47556149
[2025-11-26 03:54:35] 2025-11-26 08:54:02,539 | INFO     | errors: (none)
[2025-11-26 03:54:35] 2025-11-26 08:54:02,539 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 03:54:35] 2025-11-26 08:54:02,539 | INFO     | pilot state: finished 
[2025-11-26 03:54:35] 2025-11-26 08:54:02,539 | INFO     | transexitcode: 0
[2025-11-26 03:54:35] 2025-11-26 08:54:02,539 | INFO     | exeerrorcode: 0
[2025-11-26 03:54:35] 2025-11-26 08:54:02,539 | INFO     | exeerrordiag: 
[2025-11-26 03:54:35] 2025-11-26 08:54:02,539 | INFO     | exitcode: 0
[2025-11-26 03:54:35] 2025-11-26 08:54:02,539 | INFO     | exitmsg: OK
[2025-11-26 03:54:35] 2025-11-26 08:54:02,539 | INFO     | cpuconsumptiontime: 351822 s
[2025-11-26 03:54:35] 2025-11-26 08:54:02,540 | INFO     | nevents: 1000
[2025-11-26 03:54:35] 2025-11-26 08:54:02,540 | INFO     | neventsw: 0
[2025-11-26 03:54:35] 2025-11-26 08:54:02,540 | INFO     | pid: 6990
[2025-11-26 03:54:35] 2025-11-26 08:54:02,540 | INFO     | pgrp: 6990
[2025-11-26 03:54:35] 2025-11-26 08:54:02,540 | INFO     | corecount: 8
[2025-11-26 03:54:35] 2025-11-26 08:54:02,540 | INFO     | event service: False
[2025-11-26 03:54:35] 2025-11-26 08:54:02,540 | INFO     | sizes: {0: 2284137, 1: 2284336, 7: 2284598, 12: 2284626, 45392: 2330717, 45393: 2330716, 45398: 2339894, 45400: 2339950, 45407: 2340196}
[2025-11-26 03:54:35] 2025-11-26 08:54:02,541 | INFO     | --------------------------------------------------
[2025-11-26 03:54:35] 2025-11-26 08:54:02,541 | INFO     | 
[2025-11-26 03:54:35] 2025-11-26 08:54:02,542 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 03:54:35] 2025-11-26 08:54:02,573 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,573 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,573 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,574 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,575 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,575 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,575 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,575 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,576 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,576 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,576 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,576 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 03:54:35] 2025-11-26 08:54:02,576 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,577 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 03:54:35] 2025-11-26 08:54:02,577 | INFO     | job 6895559308 has completed (purged errors)
[2025-11-26 03:54:35] 2025-11-26 08:54:02,577 | INFO     | overall cleanup function is called
[2025-11-26 03:54:35] 2025-11-26 08:54:03,593 | INFO     | --- collectZombieJob: --- 10, [6990]
[2025-11-26 03:54:35] 2025-11-26 08:54:03,594 | INFO     | zombie collector waiting for pid 6990
[2025-11-26 03:54:35] 2025-11-26 08:54:03,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 03:54:35] 2025-11-26 08:54:03,594 | INFO     | collected zombie processes
[2025-11-26 03:54:35] 2025-11-26 08:54:03,594 | INFO     | will attempt to kill all subprocesses of pid=6990
[2025-11-26 03:54:35] 2025-11-26 08:54:03,686 | INFO     | process IDs to be killed: [6990] (in reverse order)
[2025-11-26 03:54:35] 2025-11-26 08:54:03,747 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 03:54:35] 2025-11-26 08:54:03,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 03:54:35] 2025-11-26 08:54:03,751 | INFO     | did not find any defunct processes belonging to 6990
[2025-11-26 03:54:35] 2025-11-26 08:54:03,754 | INFO     | did not find any defunct processes belonging to 6990
[2025-11-26 03:54:35] 2025-11-26 08:54:03,756 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 03:54:35] 2025-11-26 08:54:03,756 | INFO     | ready for new job
[2025-11-26 03:54:35] 2025-11-26 08:54:03,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 03:54:35] 2025-11-26 08:54:03,760 | INFO     | ***************************************
[2025-11-26 03:54:35] 2025-11-26 08:54:03,761 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 03:54:35] 2025-11-26 08:54:03,761 | INFO     | ***************************************
[2025-11-26 03:54:35] 2025-11-26 08:54:03,761 | INFO     | 
[2025-11-26 03:54:35] 2025-11-26 08:54:03,761 | INFO     | architecture information:
[2025-11-26 03:54:35] 2025-11-26 08:54:03,762 | INFO     | executing command: cat /etc/os-release
[2025-11-26 03:54:35] 2025-11-26 08:54:03,783 | INFO     | cat /etc/os-release:
[2025-11-26 03:54:35] NAME="CentOS Linux"
[2025-11-26 03:54:35] VERSION="7 (Core)"
[2025-11-26 03:54:35] ID="centos"
[2025-11-26 03:54:35] ID_LIKE="rhel fedora"
[2025-11-26 03:54:35] VERSION_ID="7"
[2025-11-26 03:54:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 03:54:35] ANSI_COLOR="0;31"
[2025-11-26 03:54:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 03:54:35] HOME_URL="https://www.centos.org/"
[2025-11-26 03:54:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 03:54:35] 
[2025-11-26 03:54:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 03:54:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 03:54:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 03:54:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 03:54:35] 
[2025-11-26 03:54:35] 2025-11-26 08:54:03,783 | INFO     | ***************************************
[2025-11-26 03:54:35] 2025-11-26 08:54:04,286 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 03:54:35] 2025-11-26 08:54:04,307 | INFO     | sufficient remaining disk space (17467179008 B)
[2025-11-26 03:54:35] 2025-11-26 08:54:04,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 03:54:35] 2025-11-26 08:54:04,307 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 03:54:35] 2025-11-26 08:54:04,308 | INFO     | update_server=False
[2025-11-26 03:54:35] 2025-11-26 08:54:04,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 03:54:35] 2025-11-26 08:54:04,308 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:54:35] 2025-11-26 08:54:04,309 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 03:54:35] 2025-11-26 08:54:04,922 | INFO     | all job control threads have been joined
[2025-11-26 03:54:35] 2025-11-26 08:54:05,012 | INFO     | all payload control threads have been joined
[2025-11-26 03:54:35] 2025-11-26 08:54:05,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:54:35] 2025-11-26 08:54:05,066 | INFO     | aborting loop
[2025-11-26 03:54:35] 2025-11-26 08:54:05,314 | INFO     | [job] retrieve thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:05,314 | INFO     | [job] queue monitor thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:05,317 | INFO     | all data control threads have been joined
[2025-11-26 03:54:35] 2025-11-26 08:54:05,633 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:05,732 | INFO     | [data] copytool_in thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:05,795 | INFO     | [payload] validate_post thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:05,823 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:05,928 | INFO     | [job] control thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:05,989 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:06,018 | INFO     | [payload] control thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:06,072 | INFO     | [job] job monitor thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:06,109 | INFO     | [job] validate thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:06,314 | INFO     | [data] copytool_out thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:06,323 | INFO     | [data] control thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:06,505 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:06,722 | INFO     | [payload] failed_post thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:06,855 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 03:54:35] 2025-11-26 08:54:10,862 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 03:54:35] 2025-11-26 08:54:12,846 | INFO     | [monitor] cgroup control has ended
[2025-11-26 03:54:35] 2025-11-26 08:54:14,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139789560174400)>', '<ExcThread(monitor, started 139788787095296)>']
[2025-11-26 03:54:35] 2025-11-26 08:54:19,087 | INFO     | all workflow threads have been joined
[2025-11-26 03:54:35] 2025-11-26 08:54:19,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 03:54:35] 2025-11-26 08:54:19,088 | INFO     | traces error code: 0
[2025-11-26 03:54:35] 2025-11-26 08:54:19,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 03:54:35] 2025-11-26 08:54:34,741 | INFO     | PID=354 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-11-26 03:54:35] 2025-11-26 08:54:34,742 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 03:54:35] 2025-11-26 08:54:34,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 03:54:35] 2025-11-26 08:54:34,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 03:54:35] 2025-11-26 08:54:34,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 03:54:35] 2025-11-26 08:54:34,742 | INFO     | [monitor] control thread has ended
[2025-11-26 03:54:35] 2025-11-26 08:54:34,850 [wrapper] ==== pilot stdout END ====
[2025-11-26 03:54:35] 2025-11-26 08:54:34,856 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 03:54:35] 2025-11-26 08:54:34,861 [wrapper] pilotpid: 354
[2025-11-26 03:54:35] 2025-11-26 08:54:34,866 [wrapper] Pilot exit status: 0
[2025-11-26 03:54:35] 2025-11-26 08:54:34,884 [wrapper] pandaids: 6895559308
[2025-11-26 03:54:35] 2025-11-26 08:54:34,931 [wrapper] cleanup supervisor_pilot 12557 355
[2025-11-26 03:54:35] 2025-11-26 08:54:34,936 [wrapper] Test setup, not cleaning
[2025-11-26 03:54:35] 2025-11-26 08:54:34,941 [wrapper] apfmon messages muted
[2025-11-26 03:54:35] 2025-11-26 08:54:34,946 [wrapper] ==== wrapper stdout END ====
[2025-11-26 03:54:35] 2025-11-26 08:54:34,950 [wrapper] ==== wrapper stderr END ====
[2025-11-26 03:54:35]  *** Error codes and diagnostics ***
[2025-11-26 03:54:35]     "exeErrorCode": 0,
[2025-11-26 03:54:35]     "exeErrorDiag": "",
[2025-11-26 03:54:35]     "pilotErrorCode": 0,
[2025-11-26 03:54:35]     "pilotErrorDiag": "",
[2025-11-26 03:54:35]  *** Listing of results directory ***
[2025-11-26 03:54:35] total 1319392
[2025-11-26 03:54:35] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 05:13 pilot3.tar.gz
[2025-11-26 03:54:35] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 05:21 queuedata.json
[2025-11-26 03:54:35] -rwx------ 1 boincer umatlas     36292 Nov 24 05:23 runpilot2-wrapper.sh
[2025-11-26 03:54:35] -rw-r--r-- 1 boincer umatlas       100 Nov 25 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 03:54:35] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 15:16 run_atlas
[2025-11-26 03:54:35] -rw-r--r-- 1 boincer umatlas       105 Nov 25 15:16 job.xml
[2025-11-26 03:54:35] -rw-r--r-- 2 boincer umatlas 409704421 Nov 25 15:16 EVNT.47483658._001304.pool.root.1
[2025-11-26 03:54:35] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 15:16 start_atlas.sh
[2025-11-26 03:54:35] drwxrwx--x 2 boincer umatlas      4096 Nov 25 15:16 shared
[2025-11-26 03:54:35] -rw-r--r-- 2 boincer umatlas    590111 Nov 25 15:16 input.tar.gz
[2025-11-26 03:54:35] -rw-r--r-- 1 boincer umatlas         0 Nov 25 15:16 boinc_lockfile
[2025-11-26 03:54:35] -rw-r--r-- 1 boincer umatlas      2782 Nov 25 15:16 pandaJob.out
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas        57 Nov 25 15:16 setup.sh.local
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas    991893 Nov 25 15:16 agis_schedconf.cvmfs.json
[2025-11-26 03:54:35] drwx------ 5 boincer umatlas      4096 Nov 25 15:16 pilot3
[2025-11-26 03:54:35] -rw-r--r-- 1 boincer umatlas       533 Nov 26 03:44 boinc_task_state.xml
[2025-11-26 03:54:35] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 03:47 init_data.xml
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas 920989306 Nov 26 03:53 HITS.47556149._002901.pool.root.1
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas      1076 Nov 26 03:53 memory_monitor_summary.json
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas   1516240 Nov 26 03:53 agis_ddmendpoints.agis.ALL.json
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas   1983806 Nov 26 03:53 log.47556149._002901.job.log.tgz.1
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas      8656 Nov 26 03:54 heartbeat.json
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas        95 Nov 26 03:54 pilot_heartbeat.json
[2025-11-26 03:54:35] -rw-r--r-- 1 boincer umatlas        29 Nov 26 03:54 wrapper_checkpoint.txt
[2025-11-26 03:54:35] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 03:54 boinc_mmap_file
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas       743 Nov 26 03:54 pilotlog.txt
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas   6241526 Nov 26 03:54 log.47556149._002901.job.log.1
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas       353 Nov 26 03:54 output.list
[2025-11-26 03:54:35] -rw-r--r-- 1 boincer umatlas       620 Nov 26 03:54 runtime_log
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas   8243200 Nov 26 03:54 result.tar.gz
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas       668 Nov 26 03:54 yzJLDm9tih8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUbLKDmmJs8im.diag
[2025-11-26 03:54:35] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 03:54 runtime_log.err
[2025-11-26 03:54:35] -rw-r--r-- 1 boincer umatlas     21322 Nov 26 03:54 stderr.txt
[2025-11-26 03:54:35] HITS file was successfully produced:
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas 920989306 Nov 26 03:53 shared/HITS.pool.root.1
[2025-11-26 03:54:35]  *** Contents of shared directory: ***
[2025-11-26 03:54:35] total 1308160
[2025-11-26 03:54:35] -rw-r--r-- 2 boincer umatlas 409704421 Nov 25 15:16 ATLAS.root_0
[2025-11-26 03:54:35] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 15:16 start_atlas.sh
[2025-11-26 03:54:35] -rw-r--r-- 2 boincer umatlas    590111 Nov 25 15:16 input.tar.gz
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas 920989306 Nov 26 03:53 HITS.pool.root.1
[2025-11-26 03:54:35] -rw------- 1 boincer umatlas   8243200 Nov 26 03:54 result.tar.gz
03:54:36 (28891): run_atlas exited; CPU time 347745.362384
03:54:36 (28891): called boinc_finish(0)

</stderr_txt>
]]>

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