Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:21:18 (2880312): wrapper (7.7.26015): starting
17:21:18 (2880312): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 17:21:18] Arguments: --nthreads 8
[2025-11-25 17:21:18] Threads: 8
[2025-11-25 17:21:18] Checking for CVMFS
[2025-11-25 17:21:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:21:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:21:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:21:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:21:20] 2.13.3.0 10079 27506 390600 153300 3 146 17604716 32935937 53975 16776704 0 302259728 99.795 155074095 29138 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 17:21:20] CVMFS is ok
[2025-11-25 17:21:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:21:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:21:20] Further information can be found at the LHC@home message board.
[2025-11-25 17:21:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:21:20] Checking for apptainer binary...
[2025-11-25 17:21:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:21:20] Running /usr/bin/apptainer --version
[2025-11-25 17:21:20] apptainer version 1.4.4-1.el9
[2025-11-25 17:21:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:21:21] lc-12-33.aglt2.org
[2025-11-25 17:21:21] apptainer works
[2025-11-25 17:21:21] Set ATHENA_PROC_NUMBER=8
[2025-11-25 17:21:21] Set ATHENA_CORE_NUMBER=8
[2025-11-25 17:21:21] Starting ATLAS job with PandaID=6896255424
[2025-11-25 17:21:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 14:25:46]  *** The last 200 lines of the pilot log: ***
[2025-11-26 14:25:46] 2025-11-26 19:24:46,849 | INFO     | time since job start (75743s) is within the limit (172800.0s)
[2025-11-26 14:25:46] 2025-11-26 19:24:46,885 | INFO     | monitor loop #4188: job 0:6896255424 is in state 'finished'
[2025-11-26 14:25:46] 2025-11-26 19:24:46,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 14:25:46] 2025-11-26 19:24:48,856 | INFO     | time since job start (75745s) is within the limit (172800.0s)
[2025-11-26 14:25:46] 2025-11-26 19:24:49,389 | INFO     | monitor loop #4189: job 0:6896255424 is in state 'finished'
[2025-11-26 14:25:46] 2025-11-26 19:24:49,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 14:25:46] 2025-11-26 19:24:50,875 | INFO     | time since job start (75747s) is within the limit (172800.0s)
[2025-11-26 14:25:46] 2025-11-26 19:24:51,893 | INFO     | monitor loop #4190: job 0:6896255424 is in state 'finished'
[2025-11-26 14:25:46] 2025-11-26 19:24:51,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 14:25:46] 2025-11-26 19:24:52,199 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 14:25:46] 2025-11-26 19:24:52,239 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2749.999416666667
[2025-11-26 14:25:46] 2025-11-26 19:24:52,327 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6896255424/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 14:25:46] 2025-11-26 19:24:52,328 | INFO     | extracted standard info from prmon json
[2025-11-26 14:25:46] 2025-11-26 19:24:52,328 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 14:25:46] 2025-11-26 19:24:52,328 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 14:25:46] 2025-11-26 19:24:52,370 | INFO     | fitting pss+swap vs Time
[2025-11-26 14:25:46] 2025-11-26 19:24:52,386 | INFO     | sum of square deviations: 591203269897.9833
[2025-11-26 14:25:46] 2025-11-26 19:24:52,547 | INFO     | sum of deviations: 2693319753798.745
[2025-11-26 14:25:46] 2025-11-26 19:24:52,548 | INFO     | mean x: 1764147277.9596775
[2025-11-26 14:25:46] 2025-11-26 19:24:52,548 | INFO     | mean y: 2915490.1548387096
[2025-11-26 14:25:46] 2025-11-26 19:24:52,548 | INFO     | intersect: -8033935715.284161
[2025-11-26 14:25:46] 2025-11-26 19:24:52,550 | INFO     | chi2: 14.89785278825965
[2025-11-26 14:25:46] 2025-11-26 19:24:52,552 | INFO     | sum of square deviations: 584080860477.2886
[2025-11-26 14:25:46] 2025-11-26 19:24:52,584 | INFO     | sum of deviations: 3136215055434.108
[2025-11-26 14:25:46] 2025-11-26 19:24:52,585 | INFO     | mean x: 1764147125.4655871
[2025-11-26 14:25:46] 2025-11-26 19:24:52,585 | INFO     | mean y: 2924970.285020243
[2025-11-26 14:25:46] 2025-11-26 19:24:52,585 | INFO     | intersect: -9469641499.989027
[2025-11-26 14:25:46] 2025-11-26 19:24:52,586 | INFO     | chi2: 11.363340898049534
[2025-11-26 14:25:46] 2025-11-26 19:24:52,586 | INFO     | current chi2=11.363340898049534 (change=23.72497527291658 %)
[2025-11-26 14:25:46] 2025-11-26 19:24:52,586 | INFO     | right removable region: 1234
[2025-11-26 14:25:46] 2025-11-26 19:24:52,588 | INFO     | sum of square deviations: 584079756377.2871
[2025-11-26 14:25:46] 2025-11-26 19:24:52,642 | INFO     | sum of deviations: 2208651154387.8145
[2025-11-26 14:25:46] 2025-11-26 19:24:52,643 | INFO     | mean x: 1764147430.4655871
[2025-11-26 14:25:46] 2025-11-26 19:24:52,643 | INFO     | mean y: 2925864.9603238865
[2025-11-26 14:25:46] 2025-11-26 19:24:52,643 | INFO     | intersect: -6668057363.383648
[2025-11-26 14:25:46] 2025-11-26 19:24:52,644 | INFO     | chi2: 11.111081680068388
[2025-11-26 14:25:46] 2025-11-26 19:24:52,645 | INFO     | current chi2=11.111081680068388 (change=25.41823417113808 %)
[2025-11-26 14:25:46] 2025-11-26 19:24:52,657 | INFO     | sum of square deviations: 577013760886.9462
[2025-11-26 14:25:46] 2025-11-26 19:24:52,693 | INFO     | sum of deviations: 1937919802592.1462
[2025-11-26 14:25:46] 2025-11-26 19:24:52,693 | INFO     | mean x: 1764147582.9707317
[2025-11-26 14:25:46] 2025-11-26 19:24:52,694 | INFO     | mean y: 2931703.643089431
[2025-11-26 14:25:46] 2025-11-26 19:24:52,694 | INFO     | intersect: -5922016308.825353
[2025-11-26 14:25:46] 2025-11-26 19:24:52,695 | INFO     | chi2: 9.90800057736302
[2025-11-26 14:25:46] 2025-11-26 19:24:52,695 | INFO     | current chi2=9.90800057736302 (change=10.827758604848652 %)
[2025-11-26 14:25:46] 2025-11-26 19:24:52,695 | INFO     | left removable region: 20
[2025-11-26 14:25:46] 2025-11-26 19:24:52,697 | INFO     | sum of square deviations: 554788087506.3999
[2025-11-26 14:25:46] 2025-11-26 19:24:52,728 | INFO     | sum of deviations: 2309524566526.5415
[2025-11-26 14:25:46] 2025-11-26 19:24:52,729 | INFO     | mean x: 1764147704.9777594
[2025-11-26 14:25:46] 2025-11-26 19:24:52,729 | INFO     | mean y: 2946263.427512356
[2025-11-26 14:25:46] 2025-11-26 19:24:52,729 | INFO     | intersect: -7341015431.821671
[2025-11-26 14:25:46] 2025-11-26 19:24:52,730 | INFO     | chi2: 5.72770059368876
[2025-11-26 14:25:46] 2025-11-26 19:24:52,730 | INFO     | current memory leak: 4.16 B/s (using 1214 data points, chi2=5.73)
[2025-11-26 14:25:46] 2025-11-26 19:24:52,732 | INFO     | could have reported an average CPU frequency of 2736 MHz (45 samples)
[2025-11-26 14:25:46] 2025-11-26 19:24:52,732 | INFO     | ..............................
[2025-11-26 14:25:46] 2025-11-26 19:24:52,732 | INFO     | . Timing measurements:
[2025-11-26 14:25:46] 2025-11-26 19:24:52,732 | INFO     | . get job = 0 s
[2025-11-26 14:25:46] 2025-11-26 19:24:52,732 | INFO     | . initial setup = 4 s
[2025-11-26 14:25:46] 2025-11-26 19:24:52,732 | INFO     | . payload setup = 43 s
[2025-11-26 14:25:46] 2025-11-26 19:24:52,732 | INFO     | . stage-in = 0 s
[2025-11-26 14:25:46] 2025-11-26 19:24:52,732 | INFO     | . payload execution = 75615 s
[2025-11-26 14:25:46] 2025-11-26 19:24:52,733 | INFO     | . stage-out = 4 s
[2025-11-26 14:25:46] 2025-11-26 19:24:52,733 | INFO     | . log creation = 1 s
[2025-11-26 14:25:46] 2025-11-26 19:24:52,733 | INFO     | ..............................
[2025-11-26 14:25:46] 2025-11-26 19:24:52,826 | INFO     | 
[2025-11-26 14:25:46] 2025-11-26 19:24:52,827 | INFO     | job summary report
[2025-11-26 14:25:46] 2025-11-26 19:24:52,827 | INFO     | --------------------------------------------------
[2025-11-26 14:25:46] 2025-11-26 19:24:52,827 | INFO     | PanDA job id: 6896255424
[2025-11-26 14:25:46] 2025-11-26 19:24:52,827 | INFO     | task id: 47556161
[2025-11-26 14:25:46] 2025-11-26 19:24:52,827 | INFO     | errors: (none)
[2025-11-26 14:25:46] 2025-11-26 19:24:52,827 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 14:25:46] 2025-11-26 19:24:52,827 | INFO     | pilot state: finished 
[2025-11-26 14:25:46] 2025-11-26 19:24:52,827 | INFO     | transexitcode: 0
[2025-11-26 14:25:46] 2025-11-26 19:24:52,827 | INFO     | exeerrorcode: 0
[2025-11-26 14:25:46] 2025-11-26 19:24:52,827 | INFO     | exeerrordiag: 
[2025-11-26 14:25:46] 2025-11-26 19:24:52,827 | INFO     | exitcode: 0
[2025-11-26 14:25:46] 2025-11-26 19:24:52,827 | INFO     | exitmsg: OK
[2025-11-26 14:25:46] 2025-11-26 19:24:52,827 | INFO     | cpuconsumptiontime: 265921 s
[2025-11-26 14:25:46] 2025-11-26 19:24:52,828 | INFO     | nevents: 1000
[2025-11-26 14:25:46] 2025-11-26 19:24:52,828 | INFO     | neventsw: 0
[2025-11-26 14:25:46] 2025-11-26 19:24:52,828 | INFO     | pid: 2895234
[2025-11-26 14:25:46] 2025-11-26 19:24:52,828 | INFO     | pgrp: 2895234
[2025-11-26 14:25:46] 2025-11-26 19:24:52,828 | INFO     | corecount: 8
[2025-11-26 14:25:46] 2025-11-26 19:24:52,828 | INFO     | event service: False
[2025-11-26 14:25:46] 2025-11-26 19:24:52,828 | INFO     | sizes: {0: 2283485, 1: 2284341, 2: 2284369, 13: 2284369, 24: 2284425, 32: 2284715, 35: 2284871, 75659: 2344057, 75660: 2344056, 75666: 2353106, 75669: 2353162, 756
[2025-11-26 14:25:46] 2025-11-26 19:24:52,828 | INFO     | --------------------------------------------------
[2025-11-26 14:25:46] 2025-11-26 19:24:52,828 | INFO     | 
[2025-11-26 14:25:46] 2025-11-26 19:24:52,828 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-26 14:25:46] 2025-11-26 19:24:52,886 | INFO     | time since job start (75749s) is within the limit (172800.0s)
[2025-11-26 14:25:46] 2025-11-26 19:24:52,892 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,892 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,892 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,892 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,892 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,892 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,892 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,892 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,892 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,892 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,893 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,893 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,893 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,893 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,893 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,893 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,893 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,893 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 14:25:46] 2025-11-26 19:24:52,893 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,893 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 14:25:46] 2025-11-26 19:24:52,893 | INFO     | job 6896255424 has completed (purged errors)
[2025-11-26 14:25:46] 2025-11-26 19:24:52,894 | INFO     | overall cleanup function is called
[2025-11-26 14:25:46] 2025-11-26 19:24:53,910 | INFO     | --- collectZombieJob: --- 10, [2895234]
[2025-11-26 14:25:46] 2025-11-26 19:24:53,910 | INFO     | zombie collector waiting for pid 2895234
[2025-11-26 14:25:46] 2025-11-26 19:24:53,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 14:25:46] 2025-11-26 19:24:53,911 | INFO     | collected zombie processes
[2025-11-26 14:25:46] 2025-11-26 19:24:53,911 | INFO     | will attempt to kill all subprocesses of pid=2895234
[2025-11-26 14:25:46] 2025-11-26 19:24:54,914 | INFO     | process IDs to be killed: [2895234] (in reverse order)
[2025-11-26 14:25:46] 2025-11-26 19:24:55,204 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 14:25:46] 2025-11-26 19:24:55,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 14:25:46] 2025-11-26 19:24:55,245 | INFO     | did not find any defunct processes belonging to 2895234
[2025-11-26 14:25:46] 2025-11-26 19:24:55,273 | INFO     | did not find any defunct processes belonging to 2895234
[2025-11-26 14:25:46] 2025-11-26 19:24:55,279 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 14:25:46] 2025-11-26 19:24:55,279 | INFO     | ready for new job
[2025-11-26 14:25:46] 2025-11-26 19:24:55,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 14:25:46] 2025-11-26 19:24:55,291 | INFO     | ***************************************
[2025-11-26 14:25:46] 2025-11-26 19:24:55,291 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 14:25:46] 2025-11-26 19:24:55,295 | INFO     | ***************************************
[2025-11-26 14:25:46] 2025-11-26 19:24:55,296 | INFO     | 
[2025-11-26 14:25:46] 2025-11-26 19:24:55,305 | INFO     | architecture information:
[2025-11-26 14:25:46] 2025-11-26 19:24:55,310 | INFO     | executing command: cat /etc/os-release
[2025-11-26 14:25:46] 2025-11-26 19:24:55,329 | INFO     | cat /etc/os-release:
[2025-11-26 14:25:46] NAME="CentOS Linux"
[2025-11-26 14:25:46] VERSION="7 (Core)"
[2025-11-26 14:25:46] ID="centos"
[2025-11-26 14:25:46] ID_LIKE="rhel fedora"
[2025-11-26 14:25:46] VERSION_ID="7"
[2025-11-26 14:25:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 14:25:46] ANSI_COLOR="0;31"
[2025-11-26 14:25:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 14:25:46] HOME_URL="https://www.centos.org/"
[2025-11-26 14:25:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 14:25:46] 
[2025-11-26 14:25:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 14:25:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 14:25:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 14:25:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 14:25:46] 
[2025-11-26 14:25:46] 2025-11-26 19:24:55,330 | INFO     | ***************************************
[2025-11-26 14:25:46] 2025-11-26 19:24:55,833 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-26 14:25:46] 2025-11-26 19:24:55,866 | INFO     | sufficient remaining disk space (66515369984 B)
[2025-11-26 14:25:46] 2025-11-26 19:24:55,866 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 14:25:46] 2025-11-26 19:24:55,866 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 14:25:46] 2025-11-26 19:24:55,866 | INFO     | update_server=False
[2025-11-26 14:25:46] 2025-11-26 19:24:55,866 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 14:25:46] 2025-11-26 19:24:55,867 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 14:25:46] 2025-11-26 19:24:55,867 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:25:46] 2025-11-26 19:24:55,867 | INFO     | aborting loop
[2025-11-26 14:25:46] 2025-11-26 19:24:55,878 | INFO     | all data control threads have been joined
[2025-11-26 14:25:46] 2025-11-26 19:24:56,190 | INFO     | all job control threads have been joined
[2025-11-26 14:25:46] 2025-11-26 19:24:56,432 | INFO     | all payload control threads have been joined
[2025-11-26 14:25:46] 2025-11-26 19:24:56,873 | INFO     | [job] retrieve thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:56,874 | INFO     | [job] job monitor thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:56,884 | INFO     | [data] control thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:57,023 | INFO     | [data] copytool_in thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:57,195 | INFO     | [job] control thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:57,202 | INFO     | [payload] failed_post thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:57,300 | INFO     | [payload] validate_post thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:57,379 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:57,445 | INFO     | [payload] control thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:57,757 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:57,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:25:46] 2025-11-26 19:24:57,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 14:25:46] 2025-11-26 19:24:57,875 | INFO     | [data] copytool_out thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:58,050 | INFO     | [job] validate thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:58,150 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:58,277 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:24:58,857 | INFO     | [job] queue monitor thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:25:01,861 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 14:25:46] 2025-11-26 19:25:26,990 | INFO     | PID=2885519 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 14:25:46] 2025-11-26 19:25:26,991 | INFO     | .. there are 79 such processes running
[2025-11-26 14:25:46] 2025-11-26 19:25:26,992 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 14:25:46] 2025-11-26 19:25:26,992 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 14:25:46] 2025-11-26 19:25:26,992 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 14:25:46] 2025-11-26 19:25:39,952 | INFO     | [monitor] cgroup control has ended
[2025-11-26 14:25:46] 2025-11-26 19:25:40,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550267221824)>', '<ExcThread(monitor, started 140549768075008)>']
[2025-11-26 14:25:46] 2025-11-26 19:25:41,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 14:25:46] 2025-11-26 19:25:41,087 | INFO     | [monitor] control thread has ended
[2025-11-26 14:25:46] 2025-11-26 19:25:45,677 | INFO     | all workflow threads have been joined
[2025-11-26 14:25:46] 2025-11-26 19:25:45,677 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 14:25:46] 2025-11-26 19:25:45,678 | INFO     | traces error code: 0
[2025-11-26 14:25:46] 2025-11-26 19:25:45,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 14:25:46] 2025-11-26 19:25:45,941 [wrapper] ==== pilot stdout END ====
[2025-11-26 14:25:46] 2025-11-26 19:25:45,945 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 14:25:46] 2025-11-26 19:25:45,948 [wrapper] pilotpid: 2885519
[2025-11-26 14:25:46] 2025-11-26 19:25:46,005 [wrapper] Pilot exit status: 0
[2025-11-26 14:25:46] 2025-11-26 19:25:46,032 [wrapper] pandaids: 6896255424
[2025-11-26 14:25:46] 2025-11-26 19:25:46,173 [wrapper] cleanup supervisor_pilot 3099969 2885520
[2025-11-26 14:25:46] 2025-11-26 19:25:46,177 [wrapper] Test setup, not cleaning
[2025-11-26 14:25:46] 2025-11-26 19:25:46,179 [wrapper] apfmon messages muted
[2025-11-26 14:25:46] 2025-11-26 19:25:46,182 [wrapper] ==== wrapper stdout END ====
[2025-11-26 14:25:46] 2025-11-26 19:25:46,185 [wrapper] ==== wrapper stderr END ====
[2025-11-26 14:25:46]  *** Error codes and diagnostics ***
[2025-11-26 14:25:46]     "exeErrorCode": 0,
[2025-11-26 14:25:46]     "exeErrorDiag": "",
[2025-11-26 14:25:46]     "pilotErrorCode": 0,
[2025-11-26 14:25:46]     "pilotErrorDiag": "",
[2025-11-26 14:25:46]  *** Listing of results directory ***
[2025-11-26 14:25:46] total 1333776
[2025-11-26 14:25:46] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 17:04 pilot3.tar.gz
[2025-11-26 14:25:46] -rwx------. 1 boincer umatlas     36292 Nov 24 17:57 runpilot2-wrapper.sh
[2025-11-26 14:25:46] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 17:57 queuedata.json
[2025-11-26 14:25:46] -rw-r--r--. 1 boincer umatlas       100 Nov 25 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 14:25:46] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 17:21 run_atlas
[2025-11-26 14:25:46] -rw-r--r--. 1 boincer umatlas       105 Nov 25 17:21 job.xml
[2025-11-26 14:25:46] -rw-r--r--. 2 boincer umatlas 410081328 Nov 25 17:21 EVNT.47483658._002068.pool.root.1
[2025-11-26 14:25:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:21 start_atlas.sh
[2025-11-26 14:25:46] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 17:21 shared
[2025-11-26 14:25:46] -rw-r--r--. 2 boincer umatlas    590096 Nov 25 17:21 input.tar.gz
[2025-11-26 14:25:46] -rw-r--r--. 1 boincer umatlas         0 Nov 25 17:21 boinc_lockfile
[2025-11-26 14:25:46] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 17:21 pandaJob.out
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas        57 Nov 25 17:21 setup.sh.local
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas    991877 Nov 25 17:22 agis_schedconf.cvmfs.json
[2025-11-26 14:25:46] drwx------. 5 boincer umatlas      4096 Nov 25 17:22 pilot3
[2025-11-26 14:25:46] -rw-r--r--. 1 boincer umatlas       533 Nov 26 13:59 boinc_task_state.xml
[2025-11-26 14:25:46] -rw-r--r--. 1 boincer umatlas      6885 Nov 26 14:18 init_data.xml
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas 929048484 Nov 26 14:23 HITS.47556161._000516.pool.root.1
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas      1059 Nov 26 14:24 memory_monitor_summary.json
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas   1516240 Nov 26 14:24 agis_ddmendpoints.agis.ALL.json
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas   2285346 Nov 26 14:24 log.47556161._000516.job.log.tgz.1
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas      8621 Nov 26 14:24 heartbeat.json
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas        95 Nov 26 14:25 pilot_heartbeat.json
[2025-11-26 14:25:46] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 14:25 boinc_mmap_file
[2025-11-26 14:25:46] -rw-r--r--. 1 boincer umatlas        29 Nov 26 14:25 wrapper_checkpoint.txt
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas      4824 Nov 26 14:25 pilotlog.txt
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas   9082510 Nov 26 14:25 log.47556161._000516.job.log.1
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas       353 Nov 26 14:25 output.list
[2025-11-26 14:25:46] -rw-r--r--. 1 boincer umatlas       620 Nov 26 14:25 runtime_log
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas  11386880 Nov 26 14:25 result.tar.gz
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas       660 Nov 26 14:25 tfqMDmnfuh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAzLKDmQdHzLn.diag
[2025-11-26 14:25:46] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 14:25 runtime_log.err
[2025-11-26 14:25:46] -rw-r--r--. 1 boincer umatlas     21597 Nov 26 14:25 stderr.txt
[2025-11-26 14:25:46] HITS file was successfully produced:
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas 929048484 Nov 26 14:23 shared/HITS.pool.root.1
[2025-11-26 14:25:46]  *** Contents of shared directory: ***
[2025-11-26 14:25:46] total 1319472
[2025-11-26 14:25:46] -rw-r--r--. 2 boincer umatlas 410081328 Nov 25 17:21 ATLAS.root_0
[2025-11-26 14:25:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:21 start_atlas.sh
[2025-11-26 14:25:46] -rw-r--r--. 2 boincer umatlas    590096 Nov 25 17:21 input.tar.gz
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas 929048484 Nov 26 14:23 HITS.pool.root.1
[2025-11-26 14:25:46] -rw-------. 1 boincer umatlas  11386880 Nov 26 14:25 result.tar.gz
14:25:47 (2880312): run_atlas exited; CPU time 270270.717428
14:25:47 (2880312): called boinc_finish(0)

</stderr_txt>
]]>

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