Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:53:37 (1062840): wrapper (7.7.26015): starting
12:53:37 (1062840): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 12:53:37] Arguments: --nthreads 12
[2025-11-25 12:53:37] Threads: 12
[2025-11-25 12:53:37] Checking for CVMFS
[2025-11-25 12:53:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:53:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:53:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:53:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:53:39] 2.11.5.0 2718463 27157 143524 153297 1 134 41764730 45568000 21632 130560 0 176804579 99.785 119378127 20081 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-25 12:53:39] CVMFS is ok
[2025-11-25 12:53:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:53:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:53:39] Further information can be found at the LHC@home message board.
[2025-11-25 12:53:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:53:39] Checking for apptainer binary...
[2025-11-25 12:53:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:53:39] Running /usr/bin/apptainer --version
[2025-11-25 12:53:39] apptainer version 1.4.1-1.el9
[2025-11-25 12:53:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:53:40] wns0043.triumf.lcg
[2025-11-25 12:53:40] apptainer works
[2025-11-25 12:53:40] Set ATHENA_PROC_NUMBER=12
[2025-11-25 12:53:40] Set ATHENA_CORE_NUMBER=12
[2025-11-25 12:53:40] Starting ATLAS job with PandaID=6896766442
[2025-11-25 12:53:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 13:02:29]  *** The last 200 lines of the pilot log: ***
[2025-11-25 13:02:29] 2025-11-25 21:01:32,367 | INFO     | could have reported an average CPU frequency of 1481 MHz (4 samples)
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | ..............................
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . Timing measurements:
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . get job = 0 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . initial setup = 4 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . payload setup = 35 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . stage-in = 0 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . payload execution = 178 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . stage-out = 1 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . log creation = 0 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | ..............................
[2025-11-25 13:02:29] 2025-11-25 21:01:32,369 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 13:02:29] 2025-11-25 21:01:32,369 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896766442/pilotlog.txt
[2025-11-25 13:02:29] 2025-11-25 21:01:32,381 | INFO     | monitor loop #96: job 0:6896766442 is in state 'failed'
[2025-11-25 13:02:29] 2025-11-25 21:01:32,382 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-25 13:02:29] 2025-11-25 21:01:32,387 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-25 13:02:29] - Log from pilotlog.txt -
[2025-11-25 13:02:29] 2025-11-25 21:01:32,365 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 13:02:29] 2025-11-25 21:01:32,365 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 13:02:29] 2025-11-25 21:01:32,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 13:02:29] 2025-11-25 21:01:32,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 13:02:29] 2025-11-25 21:01:32,366 | WARNING  | wrong length of table data, x=[1764104205.0, 1764104266.0, 1764104327.0], y=[29588.0, 585272.0, 574998.0] (must be same and length>=4)
[2025-11-25 13:02:29] 2025-11-25 21:01:32,367 | INFO     | could have reported an average CPU frequency of 1481 MHz (4 samples)
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | ..............................
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . Timing measurements:
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . get job = 0 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . initial setup = 4 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . payload setup = 35 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . stage-in = 0 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . payload execution = 178 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . stage-out = 1 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . log creation = 0 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | ..............................
[2025-11-25 13:02:29] 2025-11-25 21:01:32,369 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 13:02:29] 2025-11-25 21:01:32,369 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896766442/pilotlog.txt
[2025-11-25 13:02:29] 2025-11-25 21:01:32,381 | INFO     | monitor loop #96: job 0:6896766442 is in state 'failed'
[2025-11-25 13:02:29] 2025-11-25 21:01:32,382 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-25 13:02:29] 2025-11-25 21:01:32,387 | WARNING  | 
[2025-11-25 13:02:29] [begin log extracts]
[2025-11-25 13:02:29] - Log from pilotlog.txt -
[2025-11-25 13:02:29] 2025-11-25 21:01:32,365 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 13:02:29] 2025-11-25 21:01:32,365 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 13:02:29] 2025-11-25 21:01:32,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 13:02:29] 2025-11-25 21:01:32,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 13:02:29] 2025-11-25 21:01:32,366 | WARNING  | wrong length of table data, x=[1764104205.0, 1764104266.0, 1764104327.0], y=[29588.0, 585272.0, 574998.0] (must be same and length>=4)
[2025-11-25 13:02:29] 2025-11-25 21:01:32,367 | INFO     | could have reported an average CPU frequency of 1481 MHz (4 samples)
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | ..............................
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . Timing measurements:
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . get job = 0 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . initial setup = 4 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . payload setup = 35 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . stage-in = 0 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . payload execution = 178 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . stage-out = 1 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | . log creation = 0 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,368 | INFO     | ..............................
[2025-11-25 13:02:29] 2025-11-25 21:01:32,369 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 13:02:29] 2025-11-25 21:01:32,369 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896766442/pilotlog.txt
[2025-11-25 13:02:29] 2025-11-25 21:01:32,381 | INFO     | monitor loop #96: job 0:6896766442 is in state 'failed'
[2025-11-25 13:02:29] 2025-11-25 21:01:32,382 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-25 13:02:29] [end log extracts]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,388 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-25 13:02:29] 2025-11-25 21:01:32,389 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-25 13:02:29] 2025-11-25 21:01:32,479 | INFO     | 
[2025-11-25 13:02:29] 2025-11-25 21:01:32,479 | INFO     | job summary report
[2025-11-25 13:02:29] 2025-11-25 21:01:32,479 | INFO     | --------------------------------------------------
[2025-11-25 13:02:29] 2025-11-25 21:01:32,479 | INFO     | PanDA job id: 6896766442
[2025-11-25 13:02:29] 2025-11-25 21:01:32,479 | INFO     | task id: 47556185
[2025-11-25 13:02:29] 2025-11-25 21:01:32,479 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-25 12:58:58,664 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-25 13:02:29] 2025-11-25 21:01:32,479 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-25 13:02:29] 2025-11-25 21:01:32,480 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 13:02:29] 2025-11-25 21:01:32,480 | INFO     | pilot state: failed 
[2025-11-25 13:02:29] 2025-11-25 21:01:32,480 | INFO     | transexitcode: 65
[2025-11-25 13:02:29] 2025-11-25 21:01:32,480 | INFO     | exeerrorcode: 65
[2025-11-25 13:02:29] 2025-11-25 21:01:32,480 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-25 13:02:29] 2025-11-25 21:01:32,480 | INFO     | exitcode: 65
[2025-11-25 13:02:29] 2025-11-25 21:01:32,480 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-25 13:02:29] 2025-11-25 21:01:32,480 | INFO     | cpuconsumptiontime: 68 s
[2025-11-25 13:02:29] 2025-11-25 21:01:32,480 | INFO     | nevents: 0
[2025-11-25 13:02:29] 2025-11-25 21:01:32,480 | INFO     | neventsw: 0
[2025-11-25 13:02:29] 2025-11-25 21:01:32,480 | INFO     | pid: 1073473
[2025-11-25 13:02:29] 2025-11-25 21:01:32,480 | INFO     | pgrp: 1073473
[2025-11-25 13:02:29] 2025-11-25 21:01:32,481 | INFO     | corecount: 12
[2025-11-25 13:02:29] 2025-11-25 21:01:32,481 | INFO     | event service: False
[2025-11-25 13:02:29] 2025-11-25 21:01:32,481 | INFO     | sizes: {0: 2283485, 1: 2284167, 2: 2284338, 3: 2284366, 15: 2284394, 26: 2284840, 36: 2284840, 217: 2310288, 218: 2310264, 220: 2314610, 362: 2314748}
[2025-11-25 13:02:29] 2025-11-25 21:01:32,481 | INFO     | --------------------------------------------------
[2025-11-25 13:02:29] 2025-11-25 21:01:32,481 | INFO     | 
[2025-11-25 13:02:29] 2025-11-25 21:01:32,481 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-25 13:02:29] 2025-11-25 21:01:32,513 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,514 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,514 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,514 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,515 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,515 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,515 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,515 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,515 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 13:02:29] 2025-11-25 21:01:32,515 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,515 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 13:02:29] 2025-11-25 21:01:32,516 | INFO     | job 6896766442 has completed (purged errors)
[2025-11-25 13:02:29] 2025-11-25 21:01:32,516 | INFO     | overall cleanup function is called
[2025-11-25 13:02:29] 2025-11-25 21:01:33,536 | INFO     | --- collectZombieJob: --- 10, [1073473]
[2025-11-25 13:02:29] 2025-11-25 21:01:33,536 | INFO     | zombie collector waiting for pid 1073473
[2025-11-25 13:02:29] 2025-11-25 21:01:33,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 13:02:29] 2025-11-25 21:01:33,536 | INFO     | collected zombie processes
[2025-11-25 13:02:29] 2025-11-25 21:01:33,536 | INFO     | will attempt to kill all subprocesses of pid=1073473
[2025-11-25 13:02:29] 2025-11-25 21:01:34,682 | INFO     | process IDs to be killed: [1073473] (in reverse order)
[2025-11-25 13:02:29] 2025-11-25 21:01:34,782 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 13:02:29] 2025-11-25 21:01:34,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 13:02:29] 2025-11-25 21:01:34,808 | INFO     | did not find any defunct processes belonging to 1073473
[2025-11-25 13:02:29] 2025-11-25 21:01:34,838 | INFO     | did not find any defunct processes belonging to 1073473
[2025-11-25 13:02:29] 2025-11-25 21:01:34,839 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 13:02:29] 2025-11-25 21:01:34,839 | INFO     | ready for new job
[2025-11-25 13:02:29] 2025-11-25 21:01:34,840 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 13:02:29] 2025-11-25 21:01:34,851 | INFO     | ***************************************
[2025-11-25 13:02:29] 2025-11-25 21:01:34,851 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 13:02:29] 2025-11-25 21:01:34,851 | INFO     | ***************************************
[2025-11-25 13:02:29] 2025-11-25 21:01:34,851 | INFO     | 
[2025-11-25 13:02:29] 2025-11-25 21:01:34,855 | INFO     | architecture information:
[2025-11-25 13:02:29] 2025-11-25 21:01:34,866 | INFO     | executing command: cat /etc/os-release
[2025-11-25 13:02:29] 2025-11-25 21:01:35,002 | INFO     | cat /etc/os-release:
[2025-11-25 13:02:29] NAME="CentOS Linux"
[2025-11-25 13:02:29] VERSION="7 (Core)"
[2025-11-25 13:02:29] ID="centos"
[2025-11-25 13:02:29] ID_LIKE="rhel fedora"
[2025-11-25 13:02:29] VERSION_ID="7"
[2025-11-25 13:02:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 13:02:29] ANSI_COLOR="0;31"
[2025-11-25 13:02:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 13:02:29] HOME_URL="https://www.centos.org/"
[2025-11-25 13:02:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 13:02:29] 
[2025-11-25 13:02:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 13:02:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 13:02:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 13:02:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 13:02:29] 
[2025-11-25 13:02:29] 2025-11-25 21:01:35,002 | INFO     | ***************************************
[2025-11-25 13:02:29] 2025-11-25 21:01:35,505 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-25 13:02:29] 2025-11-25 21:01:35,588 | INFO     | sufficient remaining disk space (1958830145536 B)
[2025-11-25 13:02:29] 2025-11-25 21:01:35,589 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 13:02:29] 2025-11-25 21:01:35,589 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 13:02:29] 2025-11-25 21:01:35,589 | INFO     | update_server=False
[2025-11-25 13:02:29] 2025-11-25 21:01:35,589 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 13:02:29] 2025-11-25 21:01:35,600 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 13:02:29] 2025-11-25 21:01:35,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 13:02:29] 2025-11-25 21:01:35,950 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:02:29] 2025-11-25 21:01:35,950 | INFO     | aborting loop
[2025-11-25 13:02:29] 2025-11-25 21:01:36,569 | INFO     | all data control threads have been joined
[2025-11-25 13:02:29] 2025-11-25 21:01:36,590 | INFO     | all job control threads have been joined
[2025-11-25 13:02:29] 2025-11-25 21:01:36,595 | INFO     | [job] retrieve thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:36,762 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:36,872 | INFO     | all payload control threads have been joined
[2025-11-25 13:02:29] 2025-11-25 21:01:36,956 | INFO     | [job] job monitor thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:36,992 | INFO     | [payload] validate_post thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:37,161 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:37,161 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:37,201 | INFO     | [payload] failed_post thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:37,368 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:37,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:02:29] 2025-11-25 21:01:37,575 | INFO     | [data] control thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:37,596 | INFO     | [job] control thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:37,760 | INFO     | [data] copytool_in thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:37,861 | INFO     | [data] copytool_out thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:37,878 | INFO     | [payload] control thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:38,073 | INFO     | [job] validate thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:38,563 | INFO     | [job] queue monitor thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:01:39,609 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 13:02:29] 2025-11-25 21:02:04,113 | INFO     | PID=1066586 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 13:02:29] 2025-11-25 21:02:04,114 | INFO     | .. there are 21 such processes running
[2025-11-25 13:02:29] 2025-11-25 21:02:04,115 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 13:02:29] 2025-11-25 21:02:04,115 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 13:02:29] 2025-11-25 21:02:04,115 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 13:02:29] 2025-11-25 21:02:22,786 | INFO     | [monitor] cgroup control has ended
[2025-11-25 13:02:29] 2025-11-25 21:02:23,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140268415420224)>', '<ExcThread(monitor, started 140267650803456)>']
[2025-11-25 13:02:29] 2025-11-25 21:02:24,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 13:02:29] 2025-11-25 21:02:24,241 | INFO     | [monitor] control thread has ended
[2025-11-25 13:02:29] 2025-11-25 21:02:28,831 | INFO     | all workflow threads have been joined
[2025-11-25 13:02:29] 2025-11-25 21:02:28,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 13:02:29] 2025-11-25 21:02:28,831 | INFO     | traces error code: 0
[2025-11-25 13:02:29] 2025-11-25 21:02:28,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 13:02:29] 2025-11-25 21:02:28,964 [wrapper] ==== pilot stdout END ====
[2025-11-25 13:02:29] 2025-11-25 21:02:28,967 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 13:02:29] 2025-11-25 21:02:28,969 [wrapper] pilotpid: 1066586
[2025-11-25 13:02:29] 2025-11-25 21:02:28,972 [wrapper] Pilot exit status: 0
[2025-11-25 13:02:29] 2025-11-25 21:02:29,065 [wrapper] pandaids: 6896766442
[2025-11-25 13:02:29] 2025-11-25 21:02:29,131 [wrapper] cleanup supervisor_pilot 1066592 1066587
[2025-11-25 13:02:29] 2025-11-25 21:02:29,135 [wrapper] Test setup, not cleaning
[2025-11-25 13:02:29] 2025-11-25 21:02:29,160 [wrapper] apfmon messages muted
[2025-11-25 13:02:29] 2025-11-25 21:02:29,188 [wrapper] ==== wrapper stdout END ====
[2025-11-25 13:02:29] 2025-11-25 21:02:29,208 [wrapper] ==== wrapper stderr END ====
[2025-11-25 13:02:29]  *** Error codes and diagnostics ***
[2025-11-25 13:02:29]     "exeErrorCode": 65,
[2025-11-25 13:02:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-25 13:02:29]     "pilotErrorCode": 1305,
[2025-11-25 13:02:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-25 13:02:29]  *** Listing of results directory ***
[2025-11-25 13:02:29] total 404948
[2025-11-25 13:02:29] -rw-r--r--. 1 boinc boinc    576529 Nov 25 01:44 pilot3.tar.gz
[2025-11-25 13:02:29] -rwx------. 1 boinc boinc     36292 Nov 25 02:06 runpilot2-wrapper.sh
[2025-11-25 13:02:29] -rw-r--r--. 1 boinc boinc      5112 Nov 25 02:06 queuedata.json
[2025-11-25 13:02:29] -rw-r--r--. 1 boinc boinc       100 Nov 25 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 13:02:29] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 12:53 run_atlas
[2025-11-25 13:02:29] -rw-r--r--. 1 boinc boinc       105 Nov 25 12:53 job.xml
[2025-11-25 13:02:29] -rw-r--r--. 1 boinc boinc      6595 Nov 25 12:53 init_data.xml
[2025-11-25 13:02:29] -rw-r--r--. 2 boinc boinc 410421682 Nov 25 12:53 EVNT.47483658._004278.pool.root.1
[2025-11-25 13:02:29] -rw-r--r--. 2 boinc boinc     15847 Nov 25 12:53 start_atlas.sh
[2025-11-25 13:02:29] drwxrwx--x. 2 boinc boinc      4096 Nov 25 12:53 shared
[2025-11-25 13:02:29] -rw-r--r--. 2 boinc boinc    590100 Nov 25 12:53 input.tar.gz
[2025-11-25 13:02:29] -rw-r--r--. 1 boinc boinc         0 Nov 25 12:53 boinc_lockfile
[2025-11-25 13:02:29] -rw-r--r--. 1 boinc boinc      2785 Nov 25 12:53 pandaJob.out
[2025-11-25 13:02:29] -rw-------. 1 boinc boinc    991893 Nov 25 12:54 agis_schedconf.cvmfs.json
[2025-11-25 13:02:29] -rw-------. 1 boinc boinc   1516240 Nov 25 12:54 agis_ddmendpoints.agis.ALL.json
[2025-11-25 13:02:29] drwx------. 5 boinc boinc      4096 Nov 25 12:54 pilot3
[2025-11-25 13:02:29] -rw-r--r--. 1 boinc boinc       525 Nov 25 12:58 boinc_task_state.xml
[2025-11-25 13:02:29] -rw-------. 1 boinc boinc      1006 Nov 25 12:59 memory_monitor_summary.json
[2025-11-25 13:02:29] -rw-------. 1 boinc boinc     49858 Nov 25 12:59 log.47556185._000419.job.log.tgz.1
[2025-11-25 13:02:29] -rw-------. 1 boinc boinc        95 Nov 25 13:01 pilot_heartbeat.json
[2025-11-25 13:02:29] -rw-------. 1 boinc boinc     10343 Nov 25 13:01 heartbeat.json
[2025-11-25 13:02:29] -rw-r--r--. 1 boinc boinc        23 Nov 25 13:02 wrapper_checkpoint.txt
[2025-11-25 13:02:29] -rw-r--r--. 1 boinc boinc      8192 Nov 25 13:02 boinc_mmap_file
[2025-11-25 13:02:29] -rw-------. 1 boinc boinc      4823 Nov 25 13:02 pilotlog.txt
[2025-11-25 13:02:29] -rw-------. 1 boinc boinc    115582 Nov 25 13:02 log.47556185._000419.job.log.1
[2025-11-25 13:02:29] -rw-------. 1 boinc boinc       186 Nov 25 13:02 output.list
[2025-11-25 13:02:29] -rw-r--r--. 1 boinc boinc       620 Nov 25 13:02 runtime_log
[2025-11-25 13:02:29] -rw-------. 1 boinc boinc    184320 Nov 25 13:02 result.tar.gz
[2025-11-25 13:02:29] -rw-r--r--. 1 boinc boinc      8636 Nov 25 13:02 runtime_log.err
[2025-11-25 13:02:29] -rw-------. 1 boinc boinc       644 Nov 25 13:02 jdnKDmP74h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnJMKDmgBn2bm.diag
[2025-11-25 13:02:29] -rw-r--r--. 1 boinc boinc     22545 Nov 25 13:02 stderr.txt
[2025-11-25 13:02:29] No HITS result produced
[2025-11-25 13:02:29]  *** Contents of shared directory: ***
[2025-11-25 13:02:29] total 401584
[2025-11-25 13:02:29] -rw-r--r--. 2 boinc boinc 410421682 Nov 25 12:53 ATLAS.root_0
[2025-11-25 13:02:29] -rw-r--r--. 2 boinc boinc     15847 Nov 25 12:53 start_atlas.sh
[2025-11-25 13:02:29] -rw-r--r--. 2 boinc boinc    590100 Nov 25 12:53 input.tar.gz
[2025-11-25 13:02:29] -rw-------. 1 boinc boinc    184320 Nov 25 13:02 result.tar.gz
13:02:31 (1062840): run_atlas exited; CPU time 76.182022
13:02:31 (1062840): called boinc_finish(0)

</stderr_txt>
]]>

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