Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:54:37 (1213299): wrapper (7.7.26015): starting
14:54:37 (1213299): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 14:54:37] Arguments: --nthreads 12
[2025-11-25 14:54:37] Threads: 12
[2025-11-25 14:54:37] Checking for CVMFS
[2025-11-25 14:54:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 14:54:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 14:54:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 14:54:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 14:54:37] 2.13.3.0 14328 29034 264772 153295 2 648 22651338 40960001 38338 16776704 0 357194490 99.723 255654605 51335 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 14:54:37] CVMFS is ok
[2025-11-25 14:54:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 14:54:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 14:54:37] Further information can be found at the LHC@home message board.
[2025-11-25 14:54:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 14:54:37] Checking for apptainer binary...
[2025-11-25 14:54:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 14:54:37] Running /usr/bin/apptainer --version
[2025-11-25 14:54:37] apptainer version 1.4.4-1.el9
[2025-11-25 14:54:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 14:54:37] c8-16-2.aglt2.org
[2025-11-25 14:54:37] apptainer works
[2025-11-25 14:54:37] Set ATHENA_PROC_NUMBER=12
[2025-11-25 14:54:37] Set ATHENA_CORE_NUMBER=12
[2025-11-25 14:54:37] Starting ATLAS job with PandaID=6895401978
[2025-11-25 14:54:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:01:49]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:01:49] 2025-11-26 04:00:52,152 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:01:49] 2025-11-26 04:00:52,153 | INFO     | sum of square deviations: 33654021258.57038
[2025-11-25 23:01:49] 2025-11-26 04:00:52,157 | INFO     | sum of deviations: -7556230720.9142685
[2025-11-25 23:01:49] 2025-11-26 04:00:52,157 | INFO     | mean x: 1764115036.1614256
[2025-11-25 23:01:49] 2025-11-26 04:00:52,157 | INFO     | mean y: 3408910.1677148845
[2025-11-25 23:01:49] 2025-11-26 04:00:52,157 | INFO     | intersect: 399500067.5676674
[2025-11-25 23:01:49] 2025-11-26 04:00:52,194 | INFO     | chi2: 12.815349272489419
[2025-11-25 23:01:49] 2025-11-26 04:00:52,195 | INFO     | sum of square deviations: 32606951981.754333
[2025-11-25 23:01:49] 2025-11-26 04:00:52,198 | INFO     | sum of deviations: 204551287127.07663
[2025-11-25 23:01:49] 2025-11-26 04:00:52,198 | INFO     | mean x: 1764114883.6737287
[2025-11-25 23:01:49] 2025-11-26 04:00:52,208 | INFO     | mean y: 3439817.377118644
[2025-11-25 23:01:49] 2025-11-26 04:00:52,208 | INFO     | intersect: -11063279031.333853
[2025-11-25 23:01:49] 2025-11-26 04:00:52,208 | INFO     | chi2: 8.532552830826212
[2025-11-25 23:01:49] 2025-11-26 04:00:52,208 | INFO     | current chi2=8.532552830826212 (change=33.41927208224471 %)
[2025-11-25 23:01:49] 2025-11-26 04:00:52,209 | INFO     | sum of square deviations: 31581836604.792206
[2025-11-25 23:01:49] 2025-11-26 04:00:52,212 | INFO     | sum of deviations: 423124345430.39417
[2025-11-25 23:01:49] 2025-11-26 04:00:52,212 | INFO     | mean x: 1764114731.1862955
[2025-11-25 23:01:49] 2025-11-26 04:00:52,212 | INFO     | mean y: 3472328.811563169
[2025-11-25 23:01:49] 2025-11-26 04:00:52,212 | INFO     | intersect: -23631628448.831398
[2025-11-25 23:01:49] 2025-11-26 04:00:52,224 | INFO     | chi2: 4.265206918330935
[2025-11-25 23:01:49] 2025-11-26 04:00:52,224 | INFO     | current chi2=4.265206918330935 (change=50.01253431538457 %)
[2025-11-25 23:01:49] 2025-11-26 04:00:52,225 | INFO     | sum of square deviations: 30578414323.575676
[2025-11-25 23:01:49] 2025-11-26 04:00:52,227 | INFO     | sum of deviations: 580762444761.9094
[2025-11-25 23:01:49] 2025-11-26 04:00:52,227 | INFO     | mean x: 1764114578.6969697
[2025-11-25 23:01:49] 2025-11-26 04:00:52,228 | INFO     | mean y: 3496231.577922078
[2025-11-25 23:01:49] 2025-11-26 04:00:52,228 | INFO     | intersect: -33501560136.70713
[2025-11-25 23:01:49] 2025-11-26 04:00:52,228 | INFO     | chi2: 1.7450663614874116
[2025-11-25 23:01:49] 2025-11-26 04:00:52,228 | INFO     | current chi2=1.7450663614874116 (change=59.08600930971263 %)
[2025-11-25 23:01:49] 2025-11-26 04:00:52,249 | INFO     | sum of square deviations: 29596283303.05449
[2025-11-25 23:01:49] 2025-11-26 04:00:52,252 | INFO     | sum of deviations: 593340423111.4944
[2025-11-25 23:01:49] 2025-11-26 04:00:52,252 | INFO     | mean x: 1764114426.1925602
[2025-11-25 23:01:49] 2025-11-26 04:00:52,252 | INFO     | mean y: 3498154.3807439823
[2025-11-25 23:01:49] 2025-11-26 04:00:52,252 | INFO     | intersect: -35363118299.9954
[2025-11-25 23:01:49] 2025-11-26 04:00:52,252 | INFO     | chi2: 1.5843722321246623
[2025-11-25 23:01:49] 2025-11-26 04:00:52,252 | INFO     | current chi2=1.5843722321246623 (change=9.208482434202745 %)
[2025-11-25 23:01:49] 2025-11-26 04:00:52,252 | INFO     | right removable region: 456
[2025-11-25 23:01:49] 2025-11-26 04:00:52,253 | INFO     | sum of square deviations: 32606700970.777546
[2025-11-25 23:01:49] 2025-11-26 04:00:52,272 | INFO     | sum of deviations: -119415785457.30478
[2025-11-25 23:01:49] 2025-11-26 04:00:52,272 | INFO     | mean x: 1764115188.667373
[2025-11-25 23:01:49] 2025-11-26 04:00:52,272 | INFO     | mean y: 3425133.915254237
[2025-11-25 23:01:49] 2025-11-26 04:00:52,272 | INFO     | intersect: 6464158499.142059
[2025-11-25 23:01:49] 2025-11-26 04:00:52,272 | INFO     | chi2: 11.400924749697891
[2025-11-25 23:01:49] 2025-11-26 04:00:52,272 | INFO     | current chi2=11.400924749697891 (change=11.036956486452215 %)
[2025-11-25 23:01:49] 2025-11-26 04:00:52,272 | INFO     | left removable region: 10
[2025-11-25 23:01:49] 2025-11-26 04:00:52,273 | INFO     | sum of square deviations: 27510082231.739918
[2025-11-25 23:01:49] 2025-11-26 04:00:52,303 | INFO     | sum of deviations: 444074788057.48444
[2025-11-25 23:01:49] 2025-11-26 04:00:52,303 | INFO     | mean x: 1764114700.6995516
[2025-11-25 23:01:49] 2025-11-26 04:00:52,303 | INFO     | mean y: 3521085.9215246635
[2025-11-25 23:01:49] 2025-11-26 04:00:52,303 | INFO     | intersect: -28473269903.76134
[2025-11-25 23:01:49] 2025-11-26 04:00:52,303 | INFO     | chi2: 0.041402380457148974
[2025-11-25 23:01:49] 2025-11-26 04:00:52,303 | INFO     | current memory leak: 16.14 B/s (using 446 data points, chi2=0.04)
[2025-11-25 23:01:49] 2025-11-26 04:00:52,304 | INFO     | could have reported an average CPU frequency of 3793 MHz (19 samples)
[2025-11-25 23:01:49] 2025-11-26 04:00:52,304 | INFO     | ..............................
[2025-11-25 23:01:49] 2025-11-26 04:00:52,304 | INFO     | . Timing measurements:
[2025-11-25 23:01:49] 2025-11-26 04:00:52,304 | INFO     | . get job = 0 s
[2025-11-25 23:01:49] 2025-11-26 04:00:52,304 | INFO     | . initial setup = 2 s
[2025-11-25 23:01:49] 2025-11-26 04:00:52,304 | INFO     | . payload setup = 6 s
[2025-11-25 23:01:49] 2025-11-26 04:00:52,304 | INFO     | . stage-in = 0 s
[2025-11-25 23:01:49] 2025-11-26 04:00:52,304 | INFO     | . payload execution = 29097 s
[2025-11-25 23:01:49] 2025-11-26 04:00:52,304 | INFO     | . stage-out = 6 s
[2025-11-25 23:01:49] 2025-11-26 04:00:52,304 | INFO     | . log creation = 1 s
[2025-11-25 23:01:49] 2025-11-26 04:00:52,304 | INFO     | ..............................
[2025-11-25 23:01:49] 2025-11-26 04:00:52,934 | INFO     | 
[2025-11-25 23:01:49] 2025-11-26 04:00:52,935 | INFO     | job summary report
[2025-11-25 23:01:49] 2025-11-26 04:00:52,935 | INFO     | --------------------------------------------------
[2025-11-25 23:01:49] 2025-11-26 04:00:52,935 | INFO     | PanDA job id: 6895401978
[2025-11-25 23:01:49] 2025-11-26 04:00:52,935 | INFO     | task id: 47556149
[2025-11-25 23:01:49] 2025-11-26 04:00:52,935 | INFO     | errors: (none)
[2025-11-25 23:01:49] 2025-11-26 04:00:52,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:01:49] 2025-11-26 04:00:52,935 | INFO     | pilot state: finished 
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | transexitcode: 0
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | exeerrorcode: 0
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | exeerrordiag: 
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | exitcode: 0
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | exitmsg: OK
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | cpuconsumptiontime: 137727 s
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | nevents: 1000
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | neventsw: 0
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | pid: 1236804
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | pgrp: 1236804
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | corecount: 12
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | event service: False
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | sizes: {0: 2284309, 5: 2284571, 11: 2284627, 29104: 2323140, 29112: 2332190, 29147: 2332380}
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | --------------------------------------------------
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | 
[2025-11-25 23:01:49] 2025-11-26 04:00:52,936 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,208 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:01:49] 2025-11-26 04:00:53,209 | INFO     | job 6895401978 has completed (purged errors)
[2025-11-25 23:01:49] 2025-11-26 04:00:53,209 | INFO     | overall cleanup function is called
[2025-11-25 23:01:49] 2025-11-26 04:00:54,096 | INFO     | PID=1220120 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 23:01:49] 2025-11-26 04:00:54,096 | INFO     | .. there are 61 such processes running
[2025-11-25 23:01:49] 2025-11-26 04:00:54,371 | INFO     | --- collectZombieJob: --- 10, [1236804]
[2025-11-25 23:01:49] 2025-11-26 04:00:54,371 | INFO     | zombie collector waiting for pid 1236804
[2025-11-25 23:01:49] 2025-11-26 04:00:54,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:01:49] 2025-11-26 04:00:54,371 | INFO     | collected zombie processes
[2025-11-25 23:01:49] 2025-11-26 04:00:54,371 | INFO     | will attempt to kill all subprocesses of pid=1236804
[2025-11-25 23:01:49] 2025-11-26 04:00:55,618 | INFO     | process IDs to be killed: [1236804] (in reverse order)
[2025-11-25 23:01:49] 2025-11-26 04:00:55,966 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:01:49] 2025-11-26 04:00:55,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:01:49] 2025-11-26 04:00:56,043 | INFO     | did not find any defunct processes belonging to 1236804
[2025-11-25 23:01:49] 2025-11-26 04:00:56,073 | INFO     | did not find any defunct processes belonging to 1236804
[2025-11-25 23:01:49] 2025-11-26 04:00:56,074 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:01:49] 2025-11-26 04:00:56,075 | INFO     | ready for new job
[2025-11-25 23:01:49] 2025-11-26 04:00:56,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:01:49] 2025-11-26 04:00:56,078 | INFO     | ***************************************
[2025-11-25 23:01:49] 2025-11-26 04:00:56,078 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:01:49] 2025-11-26 04:00:56,078 | INFO     | ***************************************
[2025-11-25 23:01:49] 2025-11-26 04:00:56,078 | INFO     | 
[2025-11-25 23:01:49] 2025-11-26 04:00:56,083 | INFO     | architecture information:
[2025-11-25 23:01:49] 2025-11-26 04:00:56,089 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:01:49] 2025-11-26 04:00:56,155 | INFO     | cat /etc/os-release:
[2025-11-25 23:01:49] NAME="CentOS Linux"
[2025-11-25 23:01:49] VERSION="7 (Core)"
[2025-11-25 23:01:49] ID="centos"
[2025-11-25 23:01:49] ID_LIKE="rhel fedora"
[2025-11-25 23:01:49] VERSION_ID="7"
[2025-11-25 23:01:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:01:49] ANSI_COLOR="0;31"
[2025-11-25 23:01:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:01:49] HOME_URL="https://www.centos.org/"
[2025-11-25 23:01:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:01:49] 
[2025-11-25 23:01:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:01:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:01:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:01:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:01:49] 
[2025-11-25 23:01:49] 2025-11-26 04:00:56,156 | INFO     | ***************************************
[2025-11-25 23:01:49] 2025-11-26 04:00:56,659 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 23:01:49] 2025-11-26 04:00:56,721 | INFO     | sufficient remaining disk space (156444393472 B)
[2025-11-25 23:01:49] 2025-11-26 04:00:56,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:01:49] 2025-11-26 04:00:56,722 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:01:49] 2025-11-26 04:00:56,722 | INFO     | update_server=False
[2025-11-25 23:01:49] 2025-11-26 04:00:56,722 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:01:49] 2025-11-26 04:00:56,722 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:01:49] 2025-11-26 04:00:56,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:01:49] 2025-11-26 04:00:56,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:01:49] 2025-11-26 04:00:56,722 | INFO     | aborting loop
[2025-11-25 23:01:49] 2025-11-26 04:00:56,844 | INFO     | all data control threads have been joined
[2025-11-25 23:01:49] 2025-11-26 04:00:57,361 | INFO     | all payload control threads have been joined
[2025-11-25 23:01:49] 2025-11-26 04:00:57,566 | INFO     | all job control threads have been joined
[2025-11-25 23:01:49] 2025-11-26 04:00:57,726 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:57,730 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:57,858 | INFO     | [data] control thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:57,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:01:49] 2025-11-26 04:00:58,367 | INFO     | [payload] control thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:58,398 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:58,399 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:58,402 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:58,420 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:58,572 | INFO     | [job] control thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:58,720 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:58,729 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:58,754 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:58,915 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:58,987 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:00:59,233 | INFO     | [job] validate thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:01:00,731 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:01:49] 2025-11-26 04:01:27,370 | INFO     | PID=1220120 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 23:01:49] 2025-11-26 04:01:27,370 | INFO     | .. there are 61 such processes running
[2025-11-25 23:01:49] 2025-11-26 04:01:27,370 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:01:49] 2025-11-26 04:01:27,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:01:49] 2025-11-26 04:01:27,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:01:49] 2025-11-26 04:01:40,303 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:01:49] 2025-11-26 04:01:42,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048053909312)>', '<ExcThread(monitor, started 140047693092608)>']
[2025-11-25 23:01:49] 2025-11-26 04:01:42,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:01:49] 2025-11-26 04:01:42,506 | INFO     | [monitor] control thread has ended
[2025-11-25 23:01:49] 2025-11-26 04:01:47,183 | INFO     | all workflow threads have been joined
[2025-11-25 23:01:49] 2025-11-26 04:01:47,183 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:01:49] 2025-11-26 04:01:47,184 | INFO     | traces error code: 0
[2025-11-25 23:01:49] 2025-11-26 04:01:47,184 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:01:49] 2025-11-26 04:01:48,592 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:01:49] 2025-11-26 04:01:48,634 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:01:49] 2025-11-26 04:01:48,655 [wrapper] pilotpid: 1220120
[2025-11-25 23:01:49] 2025-11-26 04:01:48,673 [wrapper] Pilot exit status: 0
[2025-11-25 23:01:49] 2025-11-26 04:01:48,758 [wrapper] pandaids: 6895401978
[2025-11-25 23:01:49] 2025-11-26 04:01:48,993 [wrapper] cleanup supervisor_pilot  110024 1220122
[2025-11-25 23:01:49] 2025-11-26 04:01:49,009 [wrapper] Test setup, not cleaning
[2025-11-25 23:01:49] 2025-11-26 04:01:49,033 [wrapper] apfmon messages muted
[2025-11-25 23:01:49] 2025-11-26 04:01:49,054 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:01:49] 2025-11-26 04:01:49,077 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:01:49]  *** Error codes and diagnostics ***
[2025-11-25 23:01:49]     "exeErrorCode": 0,
[2025-11-25 23:01:49]     "exeErrorDiag": "",
[2025-11-25 23:01:49]     "pilotErrorCode": 0,
[2025-11-25 23:01:49]     "pilotErrorDiag": "",
[2025-11-25 23:01:49]  *** Listing of results directory ***
[2025-11-25 23:01:49] total 1310684
[2025-11-25 23:01:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 02:53 pilot3.tar.gz
[2025-11-25 23:01:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 03:07 queuedata.json
[2025-11-25 23:01:49] -rwx------. 1 boincer umatlas     36292 Nov 24 03:07 runpilot2-wrapper.sh
[2025-11-25 23:01:49] -rw-r--r--. 1 boincer umatlas       100 Nov 25 14:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:01:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 14:54 run_atlas
[2025-11-25 23:01:49] -rw-r--r--. 1 boincer umatlas       105 Nov 25 14:54 job.xml
[2025-11-25 23:01:49] -rw-r--r--. 2 boincer umatlas 408420298 Nov 25 14:54 EVNT.47483658._001269.pool.root.1
[2025-11-25 23:01:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 14:54 start_atlas.sh
[2025-11-25 23:01:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 14:54 shared
[2025-11-25 23:01:49] -rw-r--r--. 2 boincer umatlas    590101 Nov 25 14:54 input.tar.gz
[2025-11-25 23:01:49] -rw-r--r--. 1 boincer umatlas         0 Nov 25 14:54 boinc_lockfile
[2025-11-25 23:01:49] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 14:54 pandaJob.out
[2025-11-25 23:01:49] -rw-------. 1 boincer umatlas        57 Nov 25 14:54 setup.sh.local
[2025-11-25 23:01:49] -rw-------. 1 boincer umatlas    991893 Nov 25 14:54 agis_schedconf.cvmfs.json
[2025-11-25 23:01:49] drwx------. 5 boincer umatlas      4096 Nov 25 14:54 pilot3
[2025-11-25 23:01:49] -rw-r--r--. 1 boincer umatlas       533 Nov 25 22:41 boinc_task_state.xml
[2025-11-25 23:01:49] -rw-------. 1 boincer umatlas 917979443 Nov 25 22:59 HITS.47556149._002551.pool.root.1
[2025-11-25 23:01:49] -rw-------. 1 boincer umatlas      1053 Nov 25 23:00 memory_monitor_summary.json
[2025-11-25 23:01:49] -rw-------. 1 boincer umatlas   1516240 Nov 25 23:00 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:01:49] -rw-------. 1 boincer umatlas   2166056 Nov 25 23:00 log.47556149._002551.job.log.tgz.1
[2025-11-25 23:01:49] -rw-r--r--. 1 boincer umatlas      7174 Nov 25 23:00 init_data.xml
[2025-11-25 23:01:49] -rw-------. 1 boincer umatlas      8583 Nov 25 23:00 heartbeat.json
[2025-11-25 23:01:49] -rw-------. 1 boincer umatlas        95 Nov 25 23:00 pilot_heartbeat.json
[2025-11-25 23:01:49] -rw-r--r--. 1 boincer umatlas        29 Nov 25 23:01 wrapper_checkpoint.txt
[2025-11-25 23:01:49] -rw-------. 1 boincer umatlas      4825 Nov 25 23:01 pilotlog.txt
[2025-11-25 23:01:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 23:01 boinc_mmap_file
[2025-11-25 23:01:49] -rw-------. 1 boincer umatlas   3751934 Nov 25 23:01 log.47556149._002551.job.log.1
[2025-11-25 23:01:49] -rw-------. 1 boincer umatlas       353 Nov 25 23:01 output.list
[2025-11-25 23:01:49] -rw-r--r--. 1 boincer umatlas       620 Nov 25 23:01 runtime_log
[2025-11-25 23:01:49] -rw-------. 1 boincer umatlas   5939200 Nov 25 23:01 result.tar.gz
[2025-11-25 23:01:49] -rw-r--r--. 1 boincer umatlas      9340 Nov 25 23:01 runtime_log.err
[2025-11-25 23:01:49] -rw-------. 1 boincer umatlas       659 Nov 25 23:01 rhKODmGngh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6WLKDmjyGHEo.diag
[2025-11-25 23:01:49] -rw-r--r--. 1 boincer umatlas      4105 Nov 25 23:01 stderr.txt
[2025-11-25 23:02:09] HITS file was successfully produced:
[2025-11-25 23:02:09] -rw-------. 1 boincer umatlas 917979443 Nov 25 22:59 shared/HITS.pool.root.1
[2025-11-25 23:02:09]  *** Contents of shared directory: ***
[2025-11-25 23:02:09] total 1301720
[2025-11-25 23:02:09] -rw-r--r--. 2 boincer umatlas 408420298 Nov 25 14:54 ATLAS.root_0
[2025-11-25 23:02:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 14:54 start_atlas.sh
[2025-11-25 23:02:09] -rw-r--r--. 2 boincer umatlas    590101 Nov 25 14:54 input.tar.gz
[2025-11-25 23:02:09] -rw-------. 1 boincer umatlas 917979443 Nov 25 22:59 HITS.pool.root.1
[2025-11-25 23:02:09] -rw-------. 1 boincer umatlas   5939200 Nov 25 23:01 result.tar.gz
23:02:10 (1213299): run_atlas exited; CPU time 138134.523763
23:02:10 (1213299): called boinc_finish(0)

</stderr_txt>
]]>

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