Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:33 (2051855): wrapper (7.7.26015): starting
00:03:33 (2051855): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:03:33] Arguments: --nthreads 9
[2025-11-26 00:03:33] Threads: 9
[2025-11-26 00:03:33] Checking for CVMFS
[2025-11-26 00:03:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:03:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:03:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:03:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:03:36] 2.13.2.0 3240580 28428 170412 153309 4 66 35178233 40960001 13433 16776704 0 39436859 99.774 19862771 37483 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:03:36] CVMFS is ok
[2025-11-26 00:03:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:03:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:03:36] Further information can be found at the LHC@home message board.
[2025-11-26 00:03:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:03:36] Checking for apptainer binary...
[2025-11-26 00:03:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:03:36] Running /usr/bin/apptainer --version
[2025-11-26 00:03:36] apptainer version 1.4.4-1.el9
[2025-11-26 00:03:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:03:37] c-210-37-4.aglt2.org
[2025-11-26 00:03:37] apptainer works
[2025-11-26 00:03:37] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:03:37] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:03:37] Starting ATLAS job with PandaID=6894216900
[2025-11-26 00:03:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:39:55]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:39:55] 2025-11-27 02:38:44,465 | INFO     | monitor loop #4489: job 0:6894216900 is in state 'finished'
[2025-11-26 21:39:55] 2025-11-27 02:38:44,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:39:55] 2025-11-27 02:38:45,180 | INFO     | time since job start (77606s) is within the limit (172800.0s)
[2025-11-26 21:39:55] 2025-11-27 02:38:46,997 | INFO     | monitor loop #4490: job 0:6894216900 is in state 'finished'
[2025-11-26 21:39:55] 2025-11-27 02:38:46,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:39:55] 2025-11-27 02:38:47,168 | INFO     | PID=2058178 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:39:55] 2025-11-27 02:38:47,168 | INFO     | .. there are 11 such processes running
[2025-11-26 21:39:55] 2025-11-27 02:38:47,510 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 21:39:55] 2025-11-27 02:38:47,514 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2669.8829464285727
[2025-11-26 21:39:55] 2025-11-27 02:38:47,523 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6894216900/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:39:55] 2025-11-27 02:38:47,524 | INFO     | extracted standard info from prmon json
[2025-11-26 21:39:55] 2025-11-27 02:38:47,524 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:39:55] 2025-11-27 02:38:47,524 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:39:55] 2025-11-27 02:38:47,524 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 21:39:55] 2025-11-27 02:38:47,524 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 21:39:55] 2025-11-27 02:38:47,546 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:39:55] 2025-11-27 02:38:47,548 | INFO     | sum of square deviations: 635157226776.4918
[2025-11-26 21:39:55] 2025-11-27 02:38:47,576 | INFO     | sum of deviations: 2390050794825.249
[2025-11-26 21:39:55] 2025-11-27 02:38:47,577 | INFO     | mean x: 1764172358.823622
[2025-11-26 21:39:55] 2025-11-27 02:38:47,577 | INFO     | mean y: 2605389.88503937
[2025-11-26 21:39:55] 2025-11-27 02:38:47,577 | INFO     | intersect: -6635847847.613714
[2025-11-26 21:39:55] 2025-11-27 02:38:47,579 | INFO     | chi2: 5.885327971070692
[2025-11-26 21:39:55] 2025-11-27 02:38:47,580 | INFO     | sum of square deviations: 627684771885.1155
[2025-11-26 21:39:55] 2025-11-27 02:38:47,610 | INFO     | sum of deviations: 2462555516408.6665
[2025-11-26 21:39:55] 2025-11-27 02:38:47,610 | INFO     | mean x: 1764172206.3241107
[2025-11-26 21:39:55] 2025-11-27 02:38:47,610 | INFO     | mean y: 2606864.056916996
[2025-11-26 21:39:55] 2025-11-27 02:38:47,610 | INFO     | intersect: -6918657109.786044
[2025-11-26 21:39:55] 2025-11-27 02:38:47,611 | INFO     | chi2: 5.18978153011467
[2025-11-26 21:39:55] 2025-11-27 02:38:47,612 | INFO     | current chi2=5.18978153011467 (change=11.818312324733256 %)
[2025-11-26 21:39:55] 2025-11-27 02:38:47,612 | INFO     | right removable region: 1264
[2025-11-26 21:39:55] 2025-11-27 02:38:47,614 | INFO     | sum of square deviations: 627684675749.1147
[2025-11-26 21:39:55] 2025-11-27 02:38:47,640 | INFO     | sum of deviations: 2030384942016.254
[2025-11-26 21:39:55] 2025-11-27 02:38:47,641 | INFO     | mean x: 1764172511.3241107
[2025-11-26 21:39:55] 2025-11-27 02:38:47,641 | INFO     | mean y: 2612726.3359683794
[2025-11-26 21:39:55] 2025-11-27 02:38:47,641 | INFO     | intersect: -5703993537.129952
[2025-11-26 21:39:55] 2025-11-27 02:38:47,642 | INFO     | chi2: 3.2364688783481403
[2025-11-26 21:39:55] 2025-11-27 02:38:47,643 | INFO     | current chi2=3.2364688783481403 (change=45.00784163164752 %)
[2025-11-26 21:39:55] 2025-11-27 02:38:47,644 | INFO     | sum of square deviations: 620271272540.8209
[2025-11-26 21:39:55] 2025-11-27 02:38:47,670 | INFO     | sum of deviations: 1837346662638.0352
[2025-11-26 21:39:55] 2025-11-27 02:38:47,671 | INFO     | mean x: 1764172663.8214285
[2025-11-26 21:39:55] 2025-11-27 02:38:47,671 | INFO     | mean y: 2616696.324603175
[2025-11-26 21:39:55] 2025-11-27 02:38:47,671 | INFO     | intersect: -5223156122.254921
[2025-11-26 21:39:55] 2025-11-27 02:38:47,672 | INFO     | chi2: 2.5849156048373776
[2025-11-26 21:39:55] 2025-11-27 02:38:47,672 | INFO     | current chi2=2.5849156048373776 (change=20.131609417585647 %)
[2025-11-26 21:39:55] 2025-11-27 02:38:47,672 | INFO     | left removable region: 20
[2025-11-26 21:39:55] 2025-11-27 02:38:47,674 | INFO     | sum of square deviations: 596940437224.3041
[2025-11-26 21:39:55] 2025-11-27 02:38:47,823 | INFO     | sum of deviations: 1598510755439.6167
[2025-11-26 21:39:55] 2025-11-27 02:38:47,824 | INFO     | mean x: 1764172785.8191319
[2025-11-26 21:39:55] 2025-11-27 02:38:47,824 | INFO     | mean y: 2624709.47829582
[2025-11-26 21:39:55] 2025-11-27 02:38:47,824 | INFO     | intersect: -4721547078.411661
[2025-11-26 21:39:55] 2025-11-27 02:38:47,829 | INFO     | chi2: 1.0728058060096854
[2025-11-26 21:39:55] 2025-11-27 02:38:47,830 | INFO     | current memory leak: 2.68 B/s (using 1244 data points, chi2=1.07)
[2025-11-26 21:39:55] 2025-11-27 02:38:47,831 | INFO     | could have reported an average CPU frequency of 2865 MHz (46 samples)
[2025-11-26 21:39:55] 2025-11-27 02:38:47,832 | INFO     | ..............................
[2025-11-26 21:39:55] 2025-11-27 02:38:47,832 | INFO     | . Timing measurements:
[2025-11-26 21:39:55] 2025-11-27 02:38:47,832 | INFO     | . get job = 0 s
[2025-11-26 21:39:55] 2025-11-27 02:38:47,832 | INFO     | . initial setup = 9 s
[2025-11-26 21:39:55] 2025-11-27 02:38:47,832 | INFO     | . payload setup = 38 s
[2025-11-26 21:39:55] 2025-11-27 02:38:47,832 | INFO     | . stage-in = 0 s
[2025-11-26 21:39:55] 2025-11-27 02:38:47,832 | INFO     | . payload execution = 77459 s
[2025-11-26 21:39:55] 2025-11-27 02:38:47,868 | INFO     | . stage-out = 5 s
[2025-11-26 21:39:55] 2025-11-27 02:38:47,868 | INFO     | . log creation = 0 s
[2025-11-26 21:39:55] 2025-11-27 02:38:47,868 | INFO     | ..............................
[2025-11-26 21:39:55] 2025-11-27 02:38:48,172 | INFO     | time since job start (77609s) is within the limit (172800.0s)
[2025-11-26 21:39:55] 2025-11-27 02:38:48,208 | INFO     | 
[2025-11-26 21:39:55] 2025-11-27 02:38:48,208 | INFO     | job summary report
[2025-11-26 21:39:55] 2025-11-27 02:38:48,208 | INFO     | --------------------------------------------------
[2025-11-26 21:39:55] 2025-11-27 02:38:48,208 | INFO     | PanDA job id: 6894216900
[2025-11-26 21:39:55] 2025-11-27 02:38:48,209 | INFO     | task id: 47523626
[2025-11-26 21:39:55] 2025-11-27 02:38:48,209 | INFO     | errors: (none)
[2025-11-26 21:39:55] 2025-11-27 02:38:48,209 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:39:55] 2025-11-27 02:38:48,209 | INFO     | pilot state: finished 
[2025-11-26 21:39:55] 2025-11-27 02:38:48,209 | INFO     | transexitcode: 0
[2025-11-26 21:39:55] 2025-11-27 02:38:48,209 | INFO     | exeerrorcode: 0
[2025-11-26 21:39:55] 2025-11-27 02:38:48,209 | INFO     | exeerrordiag: 
[2025-11-26 21:39:55] 2025-11-27 02:38:48,209 | INFO     | exitcode: 0
[2025-11-26 21:39:55] 2025-11-27 02:38:48,209 | INFO     | exitmsg: OK
[2025-11-26 21:39:55] 2025-11-27 02:38:48,209 | INFO     | cpuconsumptiontime: 95648 s
[2025-11-26 21:39:55] 2025-11-27 02:38:48,210 | INFO     | nevents: 400
[2025-11-26 21:39:55] 2025-11-27 02:38:48,210 | INFO     | neventsw: 0
[2025-11-26 21:39:55] 2025-11-27 02:38:48,210 | INFO     | pid: 2076198
[2025-11-26 21:39:55] 2025-11-27 02:38:48,210 | INFO     | pgrp: 2076198
[2025-11-26 21:39:55] 2025-11-27 02:38:48,210 | INFO     | corecount: 9
[2025-11-26 21:39:55] 2025-11-27 02:38:48,210 | INFO     | event service: False
[2025-11-26 21:39:55] 2025-11-27 02:38:48,210 | INFO     | sizes: {0: 2283060, 1: 2283745, 2: 2283944, 13: 2283944, 24: 2284000, 35: 2284028, 36: 2284446, 46: 2284474, 77502: 2343910, 77503: 2343909, 77510: 2352963, 77511:
[2025-11-26 21:39:55] 2025-11-27 02:38:48,210 | INFO     | --------------------------------------------------
[2025-11-26 21:39:55] 2025-11-27 02:38:48,210 | INFO     | 
[2025-11-26 21:39:55] 2025-11-27 02:38:48,211 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 21:39:55] 2025-11-27 02:38:48,235 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:39:55] 2025-11-27 02:38:48,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,238 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:39:55] 2025-11-27 02:38:48,238 | INFO     | job 6894216900 has completed (purged errors)
[2025-11-26 21:39:55] 2025-11-27 02:38:48,238 | INFO     | overall cleanup function is called
[2025-11-26 21:39:55] 2025-11-27 02:38:49,248 | INFO     | --- collectZombieJob: --- 10, [2076198]
[2025-11-26 21:39:55] 2025-11-27 02:38:49,248 | INFO     | zombie collector waiting for pid 2076198
[2025-11-26 21:39:55] 2025-11-27 02:38:49,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:39:55] 2025-11-27 02:38:49,248 | INFO     | collected zombie processes
[2025-11-26 21:39:55] 2025-11-27 02:38:49,248 | INFO     | will attempt to kill all subprocesses of pid=2076198
[2025-11-26 21:39:55] 2025-11-27 02:38:49,452 | INFO     | process IDs to be killed: [2076198] (in reverse order)
[2025-11-26 21:39:55] 2025-11-27 02:38:49,536 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:39:55] 2025-11-27 02:38:49,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:39:55] 2025-11-27 02:38:49,580 | INFO     | did not find any defunct processes belonging to 2076198
[2025-11-26 21:39:55] 2025-11-27 02:38:49,601 | INFO     | did not find any defunct processes belonging to 2076198
[2025-11-26 21:39:55] 2025-11-27 02:38:49,603 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:39:55] 2025-11-27 02:38:49,603 | INFO     | ready for new job
[2025-11-26 21:39:55] 2025-11-27 02:38:49,603 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:39:55] 2025-11-27 02:38:49,609 | INFO     | ***************************************
[2025-11-26 21:39:55] 2025-11-27 02:38:49,609 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:39:55] 2025-11-27 02:38:49,609 | INFO     | ***************************************
[2025-11-26 21:39:55] 2025-11-27 02:38:49,609 | INFO     | 
[2025-11-26 21:39:55] 2025-11-27 02:38:49,612 | INFO     | architecture information:
[2025-11-26 21:39:55] 2025-11-27 02:38:49,612 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:39:55] 2025-11-27 02:38:49,628 | INFO     | cat /etc/os-release:
[2025-11-26 21:39:55] NAME="CentOS Linux"
[2025-11-26 21:39:55] VERSION="7 (Core)"
[2025-11-26 21:39:55] ID="centos"
[2025-11-26 21:39:55] ID_LIKE="rhel fedora"
[2025-11-26 21:39:55] VERSION_ID="7"
[2025-11-26 21:39:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:39:55] ANSI_COLOR="0;31"
[2025-11-26 21:39:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:39:55] HOME_URL="https://www.centos.org/"
[2025-11-26 21:39:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:39:55] 
[2025-11-26 21:39:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:39:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:39:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:39:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:39:55] 
[2025-11-26 21:39:55] 2025-11-27 02:38:49,628 | INFO     | ***************************************
[2025-11-26 21:39:55] 2025-11-27 02:38:50,132 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 21:39:55] 2025-11-27 02:38:50,218 | INFO     | sufficient remaining disk space (70393004032 B)
[2025-11-26 21:39:55] 2025-11-27 02:38:50,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:39:55] 2025-11-27 02:38:50,219 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:39:55] 2025-11-27 02:38:50,219 | INFO     | update_server=False
[2025-11-26 21:39:55] 2025-11-27 02:38:50,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:39:55] 2025-11-27 02:38:50,220 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:39:55] 2025-11-27 02:38:50,411 | INFO     | all data control threads have been joined
[2025-11-26 21:39:55] 2025-11-27 02:38:50,611 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:39:55] 2025-11-27 02:38:50,611 | INFO     | aborting loop
[2025-11-26 21:39:55] 2025-11-27 02:38:50,938 | INFO     | all job control threads have been joined
[2025-11-26 21:39:55] 2025-11-27 02:38:51,085 | INFO     | all payload control threads have been joined
[2025-11-26 21:39:55] 2025-11-27 02:38:51,226 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:51,417 | INFO     | [data] control thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:51,617 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:51,623 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:39:55] 2025-11-27 02:38:51,750 | INFO     | [job] validate thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:51,830 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:51,845 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:51,886 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:51,944 | INFO     | [job] control thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:52,021 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:52,091 | INFO     | [payload] control thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:52,227 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:52,591 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:52,628 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:52,696 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:53,223 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:39:55] 2025-11-27 02:38:54,229 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:38:55,634 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:39:55] 2025-11-27 02:39:23,780 | INFO     | PID=2058178 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:39:55] 2025-11-27 02:39:23,780 | INFO     | .. there are 11 such processes running
[2025-11-26 21:39:55] 2025-11-27 02:39:23,781 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:39:55] 2025-11-27 02:39:23,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:39:55] 2025-11-27 02:39:23,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:39:55] 2025-11-27 02:39:46,360 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:39:55] 2025-11-27 02:39:47,721 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507597616960)>', '<ExcThread(monitor, started 140507315406592)>']
[2025-11-26 21:39:55] 2025-11-27 02:39:47,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:39:55] 2025-11-27 02:39:47,983 | INFO     | [monitor] control thread has ended
[2025-11-26 21:39:55] 2025-11-27 02:39:52,748 | INFO     | all workflow threads have been joined
[2025-11-26 21:39:55] 2025-11-27 02:39:52,748 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:39:55] 2025-11-27 02:39:52,748 | INFO     | traces error code: 0
[2025-11-26 21:39:55] 2025-11-27 02:39:52,748 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:39:55] 2025-11-27 02:39:53,182 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:39:55] 2025-11-27 02:39:53,218 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:39:55] 2025-11-27 02:39:53,265 [wrapper] pilotpid: 2058178
[2025-11-26 21:39:55] 2025-11-27 02:39:53,309 [wrapper] Pilot exit status: 0
[2025-11-26 21:39:55] 2025-11-27 02:39:53,445 [wrapper] pandaids: 6894216900
[2025-11-26 21:39:55] 2025-11-27 02:39:54,237 [wrapper] cleanup supervisor_pilot 4029639 2058179
[2025-11-26 21:39:55] 2025-11-27 02:39:54,271 [wrapper] Test setup, not cleaning
[2025-11-26 21:39:55] 2025-11-27 02:39:54,323 [wrapper] apfmon messages muted
[2025-11-26 21:39:55] 2025-11-27 02:39:54,356 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:39:55] 2025-11-27 02:39:54,412 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:39:55]  *** Error codes and diagnostics ***
[2025-11-26 21:39:55]     "exeErrorCode": 0,
[2025-11-26 21:39:55]     "exeErrorDiag": "",
[2025-11-26 21:39:55]     "pilotErrorCode": 0,
[2025-11-26 21:39:55]     "pilotErrorDiag": "",
[2025-11-26 21:39:55]  *** Listing of results directory ***
[2025-11-26 21:39:55] total 641072
[2025-11-26 21:39:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 18:11 pilot3.tar.gz
[2025-11-26 21:39:55] -rwx------. 1 boincer umatlas     36292 Nov 23 18:56 runpilot2-wrapper.sh
[2025-11-26 21:39:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 18:56 queuedata.json
[2025-11-26 21:39:55] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:39:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:03 run_atlas
[2025-11-26 21:39:55] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:03 job.xml
[2025-11-26 21:39:55] -rw-r--r--. 2 boincer umatlas 307057584 Nov 26 00:03 EVNT.47523624._000002.pool.root.1
[2025-11-26 21:39:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:03 start_atlas.sh
[2025-11-26 21:39:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:03 shared
[2025-11-26 21:39:55] -rw-r--r--. 2 boincer umatlas    589940 Nov 26 00:03 input.tar.gz
[2025-11-26 21:39:55] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:03 boinc_lockfile
[2025-11-26 21:39:55] -rw-r--r--. 1 boincer umatlas      2604 Nov 26 00:03 pandaJob.out
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas        57 Nov 26 00:03 setup.sh.local
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-26 21:39:55] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas 324089976 Nov 26 21:36 HITS.47523626._000005.pool.root.1
[2025-11-26 21:39:55] -rw-r--r--. 1 boincer umatlas       531 Nov 26 21:36 boinc_task_state.xml
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas      1045 Nov 26 21:38 memory_monitor_summary.json
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas   1516240 Nov 26 21:38 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:39:55] -rw-r--r--. 1 boincer umatlas      6843 Nov 26 21:38 init_data.xml
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas   1253434 Nov 26 21:38 log.47523626._000005.job.log.tgz.1
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas      7817 Nov 26 21:38 heartbeat.json
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas        95 Nov 26 21:39 pilot_heartbeat.json
[2025-11-26 21:39:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 21:39 boinc_mmap_file
[2025-11-26 21:39:55] -rw-r--r--. 1 boincer umatlas        28 Nov 26 21:39 wrapper_checkpoint.txt
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas      4824 Nov 26 21:39 pilotlog.txt
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas   9443097 Nov 26 21:39 log.47523626._000005.job.log.1
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas       357 Nov 26 21:39 output.list
[2025-11-26 21:39:55] -rw-r--r--. 1 boincer umatlas       620 Nov 26 21:39 runtime_log
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas  10711040 Nov 26 21:39 result.tar.gz
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas       661 Nov 26 21:39 smYMDm37Yh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaILKDmFfsMTm.diag
[2025-11-26 21:39:55] -rw-r--r--. 1 boincer umatlas      9353 Nov 26 21:39 runtime_log.err
[2025-11-26 21:39:55] -rw-r--r--. 1 boincer umatlas     21619 Nov 26 21:39 stderr.txt
[2025-11-26 21:39:55] HITS file was successfully produced:
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas 324089976 Nov 26 21:36 shared/HITS.pool.root.1
[2025-11-26 21:39:55]  *** Contents of shared directory: ***
[2025-11-26 21:39:55] total 627424
[2025-11-26 21:39:55] -rw-r--r--. 2 boincer umatlas 307057584 Nov 26 00:03 ATLAS.root_0
[2025-11-26 21:39:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:03 start_atlas.sh
[2025-11-26 21:39:55] -rw-r--r--. 2 boincer umatlas    589940 Nov 26 00:03 input.tar.gz
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas 324089976 Nov 26 21:36 HITS.pool.root.1
[2025-11-26 21:39:55] -rw-------. 1 boincer umatlas  10711040 Nov 26 21:39 result.tar.gz
21:39:56 (2051855): run_atlas exited; CPU time 97994.028722
21:39:56 (2051855): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN