Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:02:14 (1308526): wrapper (7.7.26015): starting
21:02:14 (1308526): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 21:02:14] Arguments: --nthreads 3
[2025-11-25 21:02:14] Threads: 3
[2025-11-25 21:02:14] Checking for CVMFS
[2025-11-25 21:02:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:02:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:02:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:02:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:02:17] 2.9.2.0 1308651 0 30036 153295 3 1 35311789 36864001 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 21:02:17] CVMFS is ok
[2025-11-25 21:02:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:02:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:02:17] Further information can be found at the LHC@home message board.
[2025-11-25 21:02:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:02:17] Checking for apptainer binary...
[2025-11-25 21:02:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:02:17] Running /usr/bin/apptainer --version
[2025-11-25 21:02:17] apptainer version 1.4.1-1.1
[2025-11-25 21:02:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:02:17] thA335
[2025-11-25 21:02:17] apptainer works
[2025-11-25 21:02:17] Set ATHENA_PROC_NUMBER=3
[2025-11-25 21:02:17] Set ATHENA_CORE_NUMBER=3
[2025-11-25 21:02:17] Starting ATLAS job with PandaID=6893846724
[2025-11-25 21:02:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 21:06:39]  *** The last 200 lines of the pilot log: ***
[2025-11-25 21:06:39] 2025-11-25 20:05:51,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 21:06:39] 2025-11-25 20:05:51,854 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 21:06:39] 2025-11-25 20:05:51,854 | INFO     | update_server=False
[2025-11-25 21:06:39] 2025-11-25 20:05:51,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 21:06:39] 2025-11-25 20:05:51,854 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:06:39] 2025-11-25 20:05:51,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:06:39] 2025-11-25 20:05:51,854 | INFO     | aborting loop
[2025-11-25 21:06:39] 2025-11-25 20:05:52,661 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 21:06:39] 2025-11-25 20:05:52,778 | INFO     | all job control threads have been joined
[2025-11-25 21:06:39] 2025-11-25 20:05:52,860 | INFO     | [job] queue monitor thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:52,861 | INFO     | [job] retrieve thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:52,861 | INFO     | [job] job monitor thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:52,863 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:52,885 | INFO     | all data control threads have been joined
[2025-11-25 21:06:39] 2025-11-25 20:05:52,916 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:53,153 | INFO     | [payload] failed_post thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:53,339 | INFO     | all payload control threads have been joined
[2025-11-25 21:06:39] 2025-11-25 20:05:53,483 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:53,784 | INFO     | [job] control thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:53,891 | INFO     | [data] control thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:54,135 | INFO     | [data] copytool_in thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:54,136 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:54,217 | INFO     | [payload] validate_post thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:54,284 | INFO     | [job] validate thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:54,346 | INFO     | [payload] control thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:54,667 | INFO     | [data] copytool_out thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:05:54,962 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 21:06:39] 2025-11-25 20:05:58,969 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 21:06:39] 2025-11-25 20:06:21,953 | INFO     | PID=1312737 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 21:06:39] 2025-11-25 20:06:21,953 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 21:06:39] 2025-11-25 20:06:21,953 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 21:06:39] 2025-11-25 20:06:21,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 21:06:39] 2025-11-25 20:06:32,943 | INFO     | [monitor] cgroup control has ended
[2025-11-25 21:06:39] 2025-11-25 20:06:34,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139735832127296)>', '<ExcThread(monitor, started 139735326508800)>']
[2025-11-25 21:06:39] 2025-11-25 20:06:35,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 21:06:39] 2025-11-25 20:06:35,017 | INFO     | [monitor] control thread has ended
[2025-11-25 21:06:39] 2025-11-25 20:06:39,807 | INFO     | all workflow threads have been joined
[2025-11-25 21:06:39] 2025-11-25 20:06:39,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 21:06:39] 2025-11-25 20:06:39,808 | INFO     | traces error code: 0
[2025-11-25 21:06:39] 2025-11-25 20:06:39,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 21:06:39] 2025-11-25 20:06:39,853 [wrapper] ==== pilot stdout END ====
[2025-11-25 21:06:39] 2025-11-25 20:06:39,857 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 21:06:39] 2025-11-25 20:06:39,860 [wrapper] pilotpid: 1312737
[2025-11-25 21:06:39] 2025-11-25 20:06:39,863 [wrapper] Pilot exit status: 0
[2025-11-25 21:06:39] 2025-11-25 20:06:39,869 [wrapper] pandaids: 6893846724
[2025-11-25 21:06:39] 2025-11-25 20:06:39,887 [wrapper] cleanup supervisor_pilot 1312743 1312738
[2025-11-25 21:06:39] 2025-11-25 20:06:39,890 [wrapper] Test setup, not cleaning
[2025-11-25 21:06:39] 2025-11-25 20:06:39,893 [wrapper] apfmon messages muted
[2025-11-25 21:06:39] 2025-11-25 20:06:39,896 [wrapper] ==== wrapper stdout END ====
[2025-11-25 21:06:39] 2025-11-25 20:06:39,899 [wrapper] ==== wrapper stderr END ====
[2025-11-25 21:06:39]  *** Error codes and diagnostics ***
[2025-11-25 21:06:39]     "exeErrorCode": 65,
[2025-11-25 21:06:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 21:06:39]     "pilotErrorCode": 1305,
[2025-11-25 21:06:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 21:06:39]  *** Listing of results directory ***
[2025-11-25 21:06:39] total 403660
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-25 21:06:39] -rwx------ 1 boinc boinc     36292 Nov 20 11:23 runpilot2-wrapper.sh
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:25 queuedata.json
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc       100 Nov 25 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 21:06:39] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 21:02 run_atlas
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc       105 Nov 25 21:02 job.xml
[2025-11-25 21:06:39] -rw-r--r-- 2 boinc boinc 409146226 Nov 25 21:02 EVNT.47493127._000229.pool.root.1
[2025-11-25 21:06:39] -rw-r--r-- 2 boinc boinc    590103 Nov 25 21:02 input.tar.gz
[2025-11-25 21:06:39] -rw-r--r-- 2 boinc boinc     15847 Nov 25 21:02 start_atlas.sh
[2025-11-25 21:06:39] drwxrwx--x 2 boinc boinc      4096 Nov 25 21:02 shared
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc         0 Nov 25 21:02 boinc_setup_complete
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc      6196 Nov 25 21:02 init_data.xml
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc         0 Nov 25 21:02 boinc_lockfile
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc      2786 Nov 25 21:02 pandaJob.out
[2025-11-25 21:06:39] -rw------- 1 boinc boinc    991893 Nov 25 21:02 agis_schedconf.cvmfs.json
[2025-11-25 21:06:39] -rw------- 1 boinc boinc   1516240 Nov 25 21:02 agis_ddmendpoints.agis.ALL.json
[2025-11-25 21:06:39] drwx------ 5 boinc boinc      4096 Nov 25 21:02 pilot3
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc       523 Nov 25 21:03 boinc_task_state.xml
[2025-11-25 21:06:39] -rw------- 1 boinc boinc       956 Nov 25 21:03 memory_monitor_summary.json
[2025-11-25 21:06:39] -rw------- 1 boinc boinc     55872 Nov 25 21:03 log.47523449._002287.job.log.tgz.1
[2025-11-25 21:06:39] -rw------- 1 boinc boinc        95 Nov 25 21:05 pilot_heartbeat.json
[2025-11-25 21:06:39] -rw------- 1 boinc boinc      8414 Nov 25 21:05 heartbeat.json
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc      8192 Nov 25 21:06 boinc_mmap_file
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc        23 Nov 25 21:06 wrapper_checkpoint.txt
[2025-11-25 21:06:39] -rw------- 1 boinc boinc      4752 Nov 25 21:06 pilotlog.txt
[2025-11-25 21:06:39] -rw------- 1 boinc boinc     93636 Nov 25 21:06 log.47523449._002287.job.log.1
[2025-11-25 21:06:39] -rw------- 1 boinc boinc       186 Nov 25 21:06 output.list
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc       620 Nov 25 21:06 runtime_log
[2025-11-25 21:06:39] -rw------- 1 boinc boinc    174080 Nov 25 21:06 result.tar.gz
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc      8744 Nov 25 21:06 runtime_log.err
[2025-11-25 21:06:39] -rw------- 1 boinc boinc       648 Nov 25 21:06 jf2LDmqzGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLRHKDmOxhNbn.diag
[2025-11-25 21:06:39] -rw-r--r-- 1 boinc boinc      8003 Nov 25 21:06 stderr.txt
[2025-11-25 21:06:39] No HITS result produced
[2025-11-25 21:06:39]  *** Contents of shared directory: ***
[2025-11-25 21:06:39] total 400332
[2025-11-25 21:06:39] -rw-r--r-- 2 boinc boinc 409146226 Nov 25 21:02 ATLAS.root_0
[2025-11-25 21:06:39] -rw-r--r-- 2 boinc boinc    590103 Nov 25 21:02 input.tar.gz
[2025-11-25 21:06:39] -rw-r--r-- 2 boinc boinc     15847 Nov 25 21:02 start_atlas.sh
[2025-11-25 21:06:39] -rw------- 1 boinc boinc    174080 Nov 25 21:06 result.tar.gz
21:06:41 (1308526): run_atlas exited; CPU time 31.556062
21:06:41 (1308526): called boinc_finish(0)

</stderr_txt>
]]>

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