Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:52:52 (2120313): wrapper (7.7.26015): starting
20:52:52 (2120313): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 20:52:52] Arguments: --nthreads 12
[2025-11-25 20:52:52] Threads: 12
[2025-11-25 20:52:52] Checking for CVMFS
[2025-11-25 20:52:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:52:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:52:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:52:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:52:52] 2.13.3.0 8990 6062 86676 153295 3 56 3812881 4097025 1044 130560 0 4651309 99.990 222670 11362 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-25 20:52:52] CVMFS is ok
[2025-11-25 20:52:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:52:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:52:52] Further information can be found at the LHC@home message board.
[2025-11-25 20:52:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:52:52] Checking for apptainer binary...
[2025-11-25 20:52:52] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-25 20:52:52] apptainer is not installed, using version from CVMFS
[2025-11-25 20:52:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:52:53] pckelar2.cern.ch
[2025-11-25 20:52:53] apptainer works
[2025-11-25 20:52:53] Set ATHENA_PROC_NUMBER=12
[2025-11-25 20:52:53] Set ATHENA_CORE_NUMBER=12
[2025-11-25 20:52:53] Starting ATLAS job with PandaID=6896243490
[2025-11-25 20:52:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 09:11:27]  *** The last 200 lines of the pilot log: ***
[2025-11-26 09:11:27] 2025-11-26 08:10:23,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 09:11:27] 2025-11-26 08:10:23,756 | INFO     | time since job start (44236s) is within the limit (172800.0s)
[2025-11-26 09:11:27] 2025-11-26 08:10:25,561 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 09:11:27] 2025-11-26 08:10:25,564 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2824.974125
[2025-11-26 09:11:27] 2025-11-26 08:10:25,567 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6896243490/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 09:11:27] 2025-11-26 08:10:25,568 | INFO     | extracted standard info from prmon json
[2025-11-26 09:11:27] 2025-11-26 08:10:25,568 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 09:11:27] 2025-11-26 08:10:25,568 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 09:11:27] 2025-11-26 08:10:25,577 | INFO     | fitting pss+swap vs Time
[2025-11-26 09:11:27] 2025-11-26 08:10:25,578 | INFO     | sum of square deviations: 118165529889.6471
[2025-11-26 09:11:27] 2025-11-26 08:10:25,587 | INFO     | sum of deviations: 1806919343586.844
[2025-11-26 09:11:27] 2025-11-26 08:10:25,587 | INFO     | mean x: 1764122507.977931
[2025-11-26 09:11:27] 2025-11-26 08:10:25,588 | INFO     | mean y: 3559010.9903448275
[2025-11-26 09:11:27] 2025-11-26 08:10:25,588 | INFO     | intersect: -26972388095.573933
[2025-11-26 09:11:27] 2025-11-26 08:10:25,588 | INFO     | chi2: 6.623330012001314
[2025-11-26 09:11:27] 2025-11-26 08:10:25,589 | INFO     | sum of square deviations: 115737756419.83205
[2025-11-26 09:11:27] 2025-11-26 08:10:25,598 | INFO     | sum of deviations: 2094385663384.574
[2025-11-26 09:11:27] 2025-11-26 08:10:25,598 | INFO     | mean x: 1764122355.4847221
[2025-11-26 09:11:27] 2025-11-26 08:10:25,599 | INFO     | mean y: 3577053.6430555554
[2025-11-26 09:11:27] 2025-11-26 08:10:25,599 | INFO     | intersect: -31919908281.435715
[2025-11-26 09:11:27] 2025-11-26 08:10:25,599 | INFO     | chi2: 3.5648706074587415
[2025-11-26 09:11:27] 2025-11-26 08:10:25,599 | INFO     | current chi2=3.5648706074587415 (change=46.17706499601738 %)
[2025-11-26 09:11:27] 2025-11-26 08:10:25,600 | INFO     | sum of square deviations: 113343471949.94958
[2025-11-26 09:11:27] 2025-11-26 08:10:25,609 | INFO     | sum of deviations: 2196208278481.1643
[2025-11-26 09:11:27] 2025-11-26 08:10:25,609 | INFO     | mean x: 1764122202.9916084
[2025-11-26 09:11:27] 2025-11-26 08:10:25,610 | INFO     | mean y: 3583531.3608391606
[2025-11-26 09:11:27] 2025-11-26 08:10:25,610 | INFO     | intersect: -34179062542.63145
[2025-11-26 09:11:27] 2025-11-26 08:10:25,610 | INFO     | chi2: 2.981036137293771
[2025-11-26 09:11:27] 2025-11-26 08:10:25,610 | INFO     | current chi2=2.981036137293771 (change=16.37743790597672 %)
[2025-11-26 09:11:27] 2025-11-26 08:10:25,610 | INFO     | right removable region: 714
[2025-11-26 09:11:27] 2025-11-26 08:10:25,611 | INFO     | sum of square deviations: 115737323929.83203
[2025-11-26 09:11:27] 2025-11-26 08:10:25,620 | INFO     | sum of deviations: 1516075198787.376
[2025-11-26 09:11:27] 2025-11-26 08:10:25,620 | INFO     | mean x: 1764122660.4847221
[2025-11-26 09:11:27] 2025-11-26 08:10:25,621 | INFO     | mean y: 3577260.4430555557
[2025-11-26 09:11:27] 2025-11-26 08:10:25,621 | INFO     | intersect: -23105153115.949463
[2025-11-26 09:11:27] 2025-11-26 08:10:25,621 | INFO     | chi2: 3.9028199730346675
[2025-11-26 09:11:27] 2025-11-26 08:10:25,621 | INFO     | current chi2=3.9028199730346675 (change=41.07465631392589 %)
[2025-11-26 09:11:27] 2025-11-26 08:10:25,622 | INFO     | sum of square deviations: 113342826574.8312
[2025-11-26 09:11:27] 2025-11-26 08:10:25,631 | INFO     | sum of deviations: 1435140461233.9546
[2025-11-26 09:11:27] 2025-11-26 08:10:25,631 | INFO     | mean x: 1764122812.9846153
[2025-11-26 09:11:27] 2025-11-26 08:10:25,632 | INFO     | mean y: 3582413.3594405595
[2025-11-26 09:11:27] 2025-11-26 08:10:25,632 | INFO     | intersect: -22333640894.094967
[2025-11-26 09:11:27] 2025-11-26 08:10:25,632 | INFO     | chi2: 3.8204018062986584
[2025-11-26 09:11:27] 2025-11-26 08:10:25,632 | INFO     | current chi2=3.8204018062986584 (change=2.1117593766930587 %)
[2025-11-26 09:11:27] 2025-11-26 08:10:25,633 | INFO     | left removable region: 20
[2025-11-26 09:11:27] 2025-11-26 08:10:25,633 | INFO     | sum of square deviations: 103646804981.49847
[2025-11-26 09:11:27] 2025-11-26 08:10:25,642 | INFO     | sum of deviations: 1714157174174.0757
[2025-11-26 09:11:27] 2025-11-26 08:10:25,642 | INFO     | mean x: 1764122782.498559
[2025-11-26 09:11:27] 2025-11-26 08:10:25,642 | INFO     | mean y: 3614211.574927954
[2025-11-26 09:11:27] 2025-11-26 08:10:25,642 | INFO     | intersect: -29172236643.486496
[2025-11-26 09:11:27] 2025-11-26 08:10:25,643 | INFO     | chi2: 0.12690978086433313
[2025-11-26 09:11:27] 2025-11-26 08:10:25,643 | INFO     | current memory leak: 16.54 B/s (using 694 data points, chi2=0.13)
[2025-11-26 09:11:27] 2025-11-26 08:10:25,644 | INFO     | could have reported an average CPU frequency of 2801 MHz (28 samples)
[2025-11-26 09:11:27] 2025-11-26 08:10:25,644 | INFO     | ..............................
[2025-11-26 09:11:27] 2025-11-26 08:10:25,644 | INFO     | . Timing measurements:
[2025-11-26 09:11:27] 2025-11-26 08:10:25,644 | INFO     | . get job = 0 s
[2025-11-26 09:11:27] 2025-11-26 08:10:25,644 | INFO     | . initial setup = 1 s
[2025-11-26 09:11:27] 2025-11-26 08:10:25,644 | INFO     | . payload setup = 12 s
[2025-11-26 09:11:27] 2025-11-26 08:10:25,644 | INFO     | . stage-in = 0 s
[2025-11-26 09:11:27] 2025-11-26 08:10:25,644 | INFO     | . payload execution = 44195 s
[2025-11-26 09:11:27] 2025-11-26 08:10:25,644 | INFO     | . stage-out = 1 s
[2025-11-26 09:11:27] 2025-11-26 08:10:25,644 | INFO     | . log creation = 0 s
[2025-11-26 09:11:27] 2025-11-26 08:10:25,645 | INFO     | ..............................
[2025-11-26 09:11:27] 2025-11-26 08:10:25,715 | INFO     | 
[2025-11-26 09:11:27] 2025-11-26 08:10:25,715 | INFO     | job summary report
[2025-11-26 09:11:27] 2025-11-26 08:10:25,715 | INFO     | --------------------------------------------------
[2025-11-26 09:11:27] 2025-11-26 08:10:25,715 | INFO     | PanDA job id: 6896243490
[2025-11-26 09:11:27] 2025-11-26 08:10:25,715 | INFO     | task id: 47556149
[2025-11-26 09:11:27] 2025-11-26 08:10:25,715 | INFO     | errors: (none)
[2025-11-26 09:11:27] 2025-11-26 08:10:25,715 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 09:11:27] 2025-11-26 08:10:25,715 | INFO     | pilot state: finished 
[2025-11-26 09:11:27] 2025-11-26 08:10:25,715 | INFO     | transexitcode: 0
[2025-11-26 09:11:27] 2025-11-26 08:10:25,716 | INFO     | exeerrorcode: 0
[2025-11-26 09:11:27] 2025-11-26 08:10:25,716 | INFO     | exeerrordiag: 
[2025-11-26 09:11:27] 2025-11-26 08:10:25,716 | INFO     | exitcode: 0
[2025-11-26 09:11:27] 2025-11-26 08:10:25,716 | INFO     | exitmsg: OK
[2025-11-26 09:11:27] 2025-11-26 08:10:25,716 | INFO     | cpuconsumptiontime: 512513 s
[2025-11-26 09:11:27] 2025-11-26 08:10:25,716 | INFO     | nevents: 1000
[2025-11-26 09:11:27] 2025-11-26 08:10:25,716 | INFO     | neventsw: 0
[2025-11-26 09:11:27] 2025-11-26 08:10:25,716 | INFO     | pid: 2131684
[2025-11-26 09:11:27] 2025-11-26 08:10:25,716 | INFO     | pgrp: 2131684
[2025-11-26 09:11:27] 2025-11-26 08:10:25,716 | INFO     | corecount: 12
[2025-11-26 09:11:27] 2025-11-26 08:10:25,716 | INFO     | event service: False
[2025-11-26 09:11:27] 2025-11-26 08:10:25,717 | INFO     | sizes: {0: 2284093, 1: 2284292, 8: 2284554, 12: 2284582, 44212: 2330160, 44214: 2339338, 44220: 2339528}
[2025-11-26 09:11:27] 2025-11-26 08:10:25,717 | INFO     | --------------------------------------------------
[2025-11-26 09:11:27] 2025-11-26 08:10:25,717 | INFO     | 
[2025-11-26 09:11:27] 2025-11-26 08:10:25,717 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-26 09:11:27] 2025-11-26 08:10:25,732 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,732 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,732 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,732 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,733 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,734 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,734 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 09:11:27] 2025-11-26 08:10:25,734 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,734 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 09:11:27] 2025-11-26 08:10:25,734 | INFO     | job 6896243490 has completed (purged errors)
[2025-11-26 09:11:27] 2025-11-26 08:10:25,734 | INFO     | overall cleanup function is called
[2025-11-26 09:11:27] 2025-11-26 08:10:26,750 | INFO     | --- collectZombieJob: --- 10, [2131684]
[2025-11-26 09:11:27] 2025-11-26 08:10:26,750 | INFO     | zombie collector waiting for pid 2131684
[2025-11-26 09:11:27] 2025-11-26 08:10:26,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 09:11:27] 2025-11-26 08:10:26,750 | INFO     | collected zombie processes
[2025-11-26 09:11:27] 2025-11-26 08:10:26,751 | INFO     | will attempt to kill all subprocesses of pid=2131684
[2025-11-26 09:11:27] 2025-11-26 08:10:26,867 | INFO     | process IDs to be killed: [2131684] (in reverse order)
[2025-11-26 09:11:27] 2025-11-26 08:10:26,908 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 09:11:27] 2025-11-26 08:10:26,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 09:11:27] 2025-11-26 08:10:26,915 | INFO     | did not find any defunct processes belonging to 2131684
[2025-11-26 09:11:27] 2025-11-26 08:10:26,920 | INFO     | did not find any defunct processes belonging to 2131684
[2025-11-26 09:11:27] 2025-11-26 08:10:26,922 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 09:11:27] 2025-11-26 08:10:26,922 | INFO     | ready for new job
[2025-11-26 09:11:27] 2025-11-26 08:10:26,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 09:11:27] 2025-11-26 08:10:26,925 | INFO     | ***************************************
[2025-11-26 09:11:27] 2025-11-26 08:10:26,925 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 09:11:27] 2025-11-26 08:10:26,925 | INFO     | ***************************************
[2025-11-26 09:11:27] 2025-11-26 08:10:26,925 | INFO     | 
[2025-11-26 09:11:27] 2025-11-26 08:10:26,926 | INFO     | architecture information:
[2025-11-26 09:11:27] 2025-11-26 08:10:26,927 | INFO     | executing command: cat /etc/os-release
[2025-11-26 09:11:27] 2025-11-26 08:10:26,939 | INFO     | cat /etc/os-release:
[2025-11-26 09:11:27] NAME="CentOS Linux"
[2025-11-26 09:11:27] VERSION="7 (Core)"
[2025-11-26 09:11:27] ID="centos"
[2025-11-26 09:11:27] ID_LIKE="rhel fedora"
[2025-11-26 09:11:27] VERSION_ID="7"
[2025-11-26 09:11:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 09:11:27] ANSI_COLOR="0;31"
[2025-11-26 09:11:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 09:11:27] HOME_URL="https://www.centos.org/"
[2025-11-26 09:11:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 09:11:27] 
[2025-11-26 09:11:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 09:11:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 09:11:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 09:11:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 09:11:27] 
[2025-11-26 09:11:27] 2025-11-26 08:10:26,939 | INFO     | ***************************************
[2025-11-26 09:11:27] 2025-11-26 08:10:27,441 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-26 09:11:27] 2025-11-26 08:10:27,459 | INFO     | sufficient remaining disk space (229740904448 B)
[2025-11-26 09:11:27] 2025-11-26 08:10:27,460 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 09:11:27] 2025-11-26 08:10:27,461 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 09:11:27] 2025-11-26 08:10:27,461 | INFO     | update_server=False
[2025-11-26 09:11:27] 2025-11-26 08:10:27,461 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 09:11:27] 2025-11-26 08:10:27,461 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:11:27] 2025-11-26 08:10:27,462 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:11:27] 2025-11-26 08:10:27,462 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 09:11:27] 2025-11-26 08:10:27,462 | INFO     | aborting loop
[2025-11-26 09:11:27] 2025-11-26 08:10:28,242 | INFO     | all payload control threads have been joined
[2025-11-26 09:11:27] 2025-11-26 08:10:28,344 | INFO     | all job control threads have been joined
[2025-11-26 09:11:27] 2025-11-26 08:10:28,394 | INFO     | all data control threads have been joined
[2025-11-26 09:11:27] 2025-11-26 08:10:28,465 | INFO     | [job] queue monitor thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:28,466 | INFO     | [job] retrieve thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:28,468 | INFO     | [job] job monitor thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:28,508 | INFO     | [job] validate thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:28,723 | INFO     | [payload] failed_post thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:28,997 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:29,063 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:29,248 | INFO     | [payload] control thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:29,257 | INFO     | [payload] validate_post thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:29,349 | INFO     | [job] control thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:29,400 | INFO     | [data] control thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:29,468 | INFO     | [data] copytool_out thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:29,669 | INFO     | [data] copytool_in thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:29,901 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:29,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 09:11:27] 2025-11-26 08:10:33,955 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:37,921 | INFO     | job.realtimelogging is not enabled
[2025-11-26 09:11:27] 2025-11-26 08:10:38,923 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 09:11:27] 2025-11-26 08:10:57,074 | INFO     | PID=2124152 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 09:11:27] 2025-11-26 08:10:57,074 | INFO     | .. there are 2 such processes running
[2025-11-26 09:11:27] 2025-11-26 08:10:57,075 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 09:11:27] 2025-11-26 08:10:57,076 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 09:11:27] 2025-11-26 08:10:57,076 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 09:11:27] 2025-11-26 08:11:20,905 | INFO     | [monitor] cgroup control has ended
[2025-11-26 09:11:27] 2025-11-26 08:11:22,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140390516258624)>', '<ExcThread(monitor, started 140389973477120)>']
[2025-11-26 09:11:27] 2025-11-26 08:11:22,195 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 09:11:27] 2025-11-26 08:11:22,195 | INFO     | [monitor] control thread has ended
[2025-11-26 09:11:27] 2025-11-26 08:11:27,121 | INFO     | all workflow threads have been joined
[2025-11-26 09:11:27] 2025-11-26 08:11:27,121 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 09:11:27] 2025-11-26 08:11:27,122 | INFO     | traces error code: 0
[2025-11-26 09:11:27] 2025-11-26 08:11:27,122 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 09:11:27] 2025-11-26 08:11:27,242 [wrapper] ==== pilot stdout END ====
[2025-11-26 09:11:27] 2025-11-26 08:11:27,245 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 09:11:27] 2025-11-26 08:11:27,247 [wrapper] pilotpid: 2124152
[2025-11-26 09:11:27] 2025-11-26 08:11:27,250 [wrapper] Pilot exit status: 0
[2025-11-26 09:11:27] 2025-11-26 08:11:27,259 [wrapper] pandaids: 6896243490
[2025-11-26 09:11:27] 2025-11-26 08:11:27,299 [wrapper] cleanup supervisor_pilot 2373483 2124153
[2025-11-26 09:11:27] 2025-11-26 08:11:27,301 [wrapper] Test setup, not cleaning
[2025-11-26 09:11:27] 2025-11-26 08:11:27,303 [wrapper] apfmon messages muted
[2025-11-26 09:11:27] 2025-11-26 08:11:27,304 [wrapper] ==== wrapper stdout END ====
[2025-11-26 09:11:27] 2025-11-26 08:11:27,306 [wrapper] ==== wrapper stderr END ====
[2025-11-26 09:11:27]  *** Error codes and diagnostics ***
[2025-11-26 09:11:27]     "exeErrorCode": 0,
[2025-11-26 09:11:27]     "exeErrorDiag": "",
[2025-11-26 09:11:27]     "pilotErrorCode": 0,
[2025-11-26 09:11:27]     "pilotErrorDiag": "",
[2025-11-26 09:11:27]  *** Listing of results directory ***
[2025-11-26 09:11:27] total 1340372
[2025-11-26 09:11:27] -rw-r--r-- 1 boinc boinc    576529 Nov 24 22:08 pilot3.tar.gz
[2025-11-26 09:11:27] -rw-r--r-- 1 boinc boinc      5112 Nov 24 22:56 queuedata.json
[2025-11-26 09:11:27] -rwx------ 1 boinc boinc     36292 Nov 24 22:58 runpilot2-wrapper.sh
[2025-11-26 09:11:27] -rw-r--r-- 1 boinc boinc       100 Nov 25 20:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 09:11:27] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 20:52 run_atlas
[2025-11-26 09:11:27] -rw-r--r-- 1 boinc boinc       105 Nov 25 20:52 job.xml
[2025-11-26 09:11:27] -rw-r--r-- 1 boinc boinc      6295 Nov 25 20:52 init_data.xml
[2025-11-26 09:11:27] -rw-r--r-- 2 boinc boinc 410380940 Nov 25 20:52 EVNT.47483658._001426.pool.root.1
[2025-11-26 09:11:27] -rw-r--r-- 2 boinc boinc     15847 Nov 25 20:52 start_atlas.sh
[2025-11-26 09:11:27] drwxrwx--x 2 boinc boinc        68 Nov 25 20:52 shared
[2025-11-26 09:11:27] -rw-r--r-- 2 boinc boinc    590107 Nov 25 20:52 input.tar.gz
[2025-11-26 09:11:27] -rw-r--r-- 1 boinc boinc         0 Nov 25 20:52 boinc_lockfile
[2025-11-26 09:11:27] -rw-r--r-- 1 boinc boinc      2785 Nov 25 20:52 pandaJob.out
[2025-11-26 09:11:27] -rw------- 1 boinc boinc    991893 Nov 25 20:53 agis_schedconf.cvmfs.json
[2025-11-26 09:11:27] drwx------ 5 boinc boinc      4096 Nov 25 20:53 pilot3
[2025-11-26 09:11:27] -rw-r--r-- 1 boinc boinc       533 Nov 26 08:59 boinc_task_state.xml
[2025-11-26 09:11:27] -rw------- 1 boinc boinc 940901397 Nov 26 09:09 HITS.47556149._004126.pool.root.1
[2025-11-26 09:11:27] -rw------- 1 boinc boinc      1037 Nov 26 09:10 memory_monitor_summary.json
[2025-11-26 09:11:27] -rw------- 1 boinc boinc   1516240 Nov 26 09:10 agis_ddmendpoints.agis.ALL.json
[2025-11-26 09:11:27] -rw------- 1 boinc boinc   2438082 Nov 26 09:10 log.47556149._004126.job.log.tgz.1
[2025-11-26 09:11:27] -rw------- 1 boinc boinc      8612 Nov 26 09:10 heartbeat.json
[2025-11-26 09:11:27] -rw------- 1 boinc boinc        95 Nov 26 09:10 pilot_heartbeat.json
[2025-11-26 09:11:27] -rw-r--r-- 1 boinc boinc        29 Nov 26 09:11 wrapper_checkpoint.txt
[2025-11-26 09:11:27] -rw-r--r-- 1 boinc boinc      8192 Nov 26 09:11 boinc_mmap_file
[2025-11-26 09:11:27] -rw------- 1 boinc boinc      4896 Nov 26 09:11 pilotlog.txt
[2025-11-26 09:11:27] -rw------- 1 boinc boinc   6236612 Nov 26 09:11 log.47556149._004126.job.log.1
[2025-11-26 09:11:27] -rw------- 1 boinc boinc       353 Nov 26 09:11 output.list
[2025-11-26 09:11:27] -rw-r--r-- 1 boinc boinc       620 Nov 26 09:11 runtime_log
[2025-11-26 09:11:27] -rw------- 1 boinc boinc   8693760 Nov 26 09:11 result.tar.gz
[2025-11-26 09:11:27] -rw-r--r-- 1 boinc boinc      8842 Nov 26 09:11 runtime_log.err
[2025-11-26 09:11:27] -rw------- 1 boinc boinc       666 Nov 26 09:11 QYVNDm7kth8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkwLKDmGoJXAn.diag
[2025-11-26 09:11:27] -rw-r--r-- 1 boinc boinc     21397 Nov 26 09:11 stderr.txt
[2025-11-26 09:11:27] HITS file was successfully produced:
[2025-11-26 09:11:27] -rw------- 1 boinc boinc 940901397 Nov 26 09:09 shared/HITS.pool.root.1
[2025-11-26 09:11:27]  *** Contents of shared directory: ***
[2025-11-26 09:11:27] total 1328704
[2025-11-26 09:11:27] -rw-r--r-- 2 boinc boinc 410380940 Nov 25 20:52 ATLAS.root_0
[2025-11-26 09:11:27] -rw-r--r-- 2 boinc boinc     15847 Nov 25 20:52 start_atlas.sh
[2025-11-26 09:11:27] -rw-r--r-- 2 boinc boinc    590107 Nov 25 20:52 input.tar.gz
[2025-11-26 09:11:27] -rw------- 1 boinc boinc 940901397 Nov 26 09:09 HITS.pool.root.1
[2025-11-26 09:11:27] -rw------- 1 boinc boinc   8693760 Nov 26 09:11 result.tar.gz
09:11:29 (2120313): run_atlas exited; CPU time 511377.216953
09:11:29 (2120313): called boinc_finish(0)

</stderr_txt>
]]>

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