Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:56:46 (2170942): wrapper (7.7.26015): starting
14:56:46 (2170942): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 14:56:46] Arguments: --nthreads 8
[2025-11-25 14:56:46] Threads: 8
[2025-11-25 14:56:46] Checking for CVMFS
[2025-11-25 14:56:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 14:56:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 14:56:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 14:56:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 14:56:46] 2.13.2.0 12053 34842 260728 153295 0 180 37347898 40960000 9089 16776704 0 36036518 99.724 24074304 38493 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 14:56:46] CVMFS is ok
[2025-11-25 14:56:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 14:56:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 14:56:46] Further information can be found at the LHC@home message board.
[2025-11-25 14:56:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 14:56:46] Checking for apptainer binary...
[2025-11-25 14:56:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 14:56:46] Running /usr/bin/apptainer --version
[2025-11-25 14:56:46] apptainer version 1.4.4-1.el9
[2025-11-25 14:56:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 14:56:46] c-210-31-4.aglt2.org
[2025-11-25 14:56:46] apptainer works
[2025-11-25 14:56:46] Set ATHENA_PROC_NUMBER=8
[2025-11-25 14:56:46] Set ATHENA_CORE_NUMBER=8
[2025-11-25 14:56:46] Starting ATLAS job with PandaID=6896243469
[2025-11-25 14:56:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 05:40:39]  *** The last 200 lines of the pilot log: ***
[2025-11-26 05:40:39] 2025-11-26 10:40:03,722 | INFO     | time since job start (52986s) is within the limit (172800.0s)
[2025-11-26 05:40:39] 2025-11-26 10:40:04,974 | INFO     | monitor loop #3376: job 0:6896243469 is in state 'finished'
[2025-11-26 05:40:39] 2025-11-26 10:40:04,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:40:39] 2025-11-26 10:40:05,096 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 05:40:39] 2025-11-26 10:40:05,101 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2900.7075000000004
[2025-11-26 05:40:39] 2025-11-26 10:40:05,112 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896243469/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 05:40:39] 2025-11-26 10:40:05,113 | INFO     | extracted standard info from prmon json
[2025-11-26 05:40:39] 2025-11-26 10:40:05,113 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 05:40:39] 2025-11-26 10:40:05,113 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 05:40:39] 2025-11-26 10:40:05,131 | INFO     | fitting pss+swap vs Time
[2025-11-26 05:40:39] 2025-11-26 10:40:05,132 | INFO     | sum of square deviations: 202780535994.2342
[2025-11-26 05:40:39] 2025-11-26 10:40:05,147 | INFO     | sum of deviations: 1672064467617.8503
[2025-11-26 05:40:39] 2025-11-26 10:40:05,147 | INFO     | mean x: 1764127088.9435484
[2025-11-26 05:40:39] 2025-11-26 10:40:05,147 | INFO     | mean y: 2956897.160138249
[2025-11-26 05:40:39] 2025-11-26 10:40:05,147 | INFO     | intersect: -14543479758.22228
[2025-11-26 05:40:39] 2025-11-26 10:40:05,149 | INFO     | chi2: 4.998521011419698
[2025-11-26 05:40:39] 2025-11-26 10:40:05,150 | INFO     | sum of square deviations: 199296968704.206
[2025-11-26 05:40:39] 2025-11-26 10:40:05,183 | INFO     | sum of deviations: 1934592189269.9624
[2025-11-26 05:40:39] 2025-11-26 10:40:05,183 | INFO     | mean x: 1764126936.4577057
[2025-11-26 05:40:39] 2025-11-26 10:40:05,183 | INFO     | mean y: 2968385.0811123988
[2025-11-26 05:40:39] 2025-11-26 10:40:05,183 | INFO     | intersect: -17121557965.428299
[2025-11-26 05:40:39] 2025-11-26 10:40:05,184 | INFO     | chi2: 2.4546405832054266
[2025-11-26 05:40:39] 2025-11-26 10:40:05,184 | INFO     | current chi2=2.4546405832054266 (change=50.892662497616456 %)
[2025-11-26 05:40:39] 2025-11-26 10:40:05,185 | INFO     | sum of square deviations: 195853436789.21216
[2025-11-26 05:40:39] 2025-11-26 10:40:05,210 | INFO     | sum of deviations: 1984716827384.7578
[2025-11-26 05:40:39] 2025-11-26 10:40:05,215 | INFO     | mean x: 1764126783.969697
[2025-11-26 05:40:39] 2025-11-26 10:40:05,215 | INFO     | mean y: 2970597.913752914
[2025-11-26 05:40:39] 2025-11-26 10:40:05,215 | INFO     | intersect: -17874132664.52779
[2025-11-26 05:40:39] 2025-11-26 10:40:05,216 | INFO     | chi2: 2.189780938921732
[2025-11-26 05:40:39] 2025-11-26 10:40:05,216 | INFO     | current chi2=2.189780938921732 (change=10.790159915706425 %)
[2025-11-26 05:40:39] 2025-11-26 10:40:05,216 | INFO     | right removable region: 857
[2025-11-26 05:40:39] 2025-11-26 10:40:05,217 | INFO     | sum of square deviations: 199295674894.20618
[2025-11-26 05:40:39] 2025-11-26 10:40:05,242 | INFO     | sum of deviations: 1453885210341.6907
[2025-11-26 05:40:39] 2025-11-26 10:40:05,247 | INFO     | mean x: 1764127241.4577057
[2025-11-26 05:40:39] 2025-11-26 10:40:05,247 | INFO     | mean y: 2966428.5805330244
[2025-11-26 05:40:39] 2025-11-26 10:40:05,247 | INFO     | intersect: -12866547708.531364
[2025-11-26 05:40:39] 2025-11-26 10:40:05,248 | INFO     | chi2: 3.0719603793248327
[2025-11-26 05:40:39] 2025-11-26 10:40:05,248 | INFO     | current chi2=3.0719603793248327 (change=38.54261345892946 %)
[2025-11-26 05:40:39] 2025-11-26 10:40:05,249 | INFO     | sum of square deviations: 195851217316.0196
[2025-11-26 05:40:39] 2025-11-26 10:40:05,278 | INFO     | sum of deviations: 1394834691206.3162
[2025-11-26 05:40:39] 2025-11-26 10:40:05,278 | INFO     | mean x: 1764127393.9662004
[2025-11-26 05:40:39] 2025-11-26 10:40:05,278 | INFO     | mean y: 2969041.872960373
[2025-11-26 05:40:39] 2025-11-26 10:40:05,278 | INFO     | intersect: -12560987018.92084
[2025-11-26 05:40:39] 2025-11-26 10:40:05,279 | INFO     | chi2: 3.032227563078953
[2025-11-26 05:40:39] 2025-11-26 10:40:05,280 | INFO     | current chi2=3.032227563078953 (change=1.293402626976989 %)
[2025-11-26 05:40:39] 2025-11-26 10:40:05,280 | INFO     | left removable region: 20
[2025-11-26 05:40:39] 2025-11-26 10:40:05,285 | INFO     | sum of square deviations: 181819837637.18262
[2025-11-26 05:40:39] 2025-11-26 10:40:05,304 | INFO     | sum of deviations: 1617282624472.946
[2025-11-26 05:40:39] 2025-11-26 10:40:05,304 | INFO     | mean x: 1764127363.5089605
[2025-11-26 05:40:39] 2025-11-26 10:40:05,304 | INFO     | mean y: 2986848.3405017923
[2025-11-26 05:40:39] 2025-11-26 10:40:05,305 | INFO     | intersect: -15688879173.74666
[2025-11-26 05:40:39] 2025-11-26 10:40:05,313 | INFO     | chi2: 0.19780438921532728
[2025-11-26 05:40:39] 2025-11-26 10:40:05,314 | INFO     | current memory leak: 8.89 B/s (using 837 data points, chi2=0.20)
[2025-11-26 05:40:39] 2025-11-26 10:40:05,315 | INFO     | could have reported an average CPU frequency of 2861 MHz (32 samples)
[2025-11-26 05:40:39] 2025-11-26 10:40:05,315 | INFO     | ..............................
[2025-11-26 05:40:39] 2025-11-26 10:40:05,315 | INFO     | . Timing measurements:
[2025-11-26 05:40:39] 2025-11-26 10:40:05,316 | INFO     | . get job = 0 s
[2025-11-26 05:40:39] 2025-11-26 10:40:05,316 | INFO     | . initial setup = 2 s
[2025-11-26 05:40:39] 2025-11-26 10:40:05,316 | INFO     | . payload setup = 5 s
[2025-11-26 05:40:39] 2025-11-26 10:40:05,316 | INFO     | . stage-in = 0 s
[2025-11-26 05:40:39] 2025-11-26 10:40:05,316 | INFO     | . payload execution = 52946 s
[2025-11-26 05:40:39] 2025-11-26 10:40:05,316 | INFO     | . stage-out = 6 s
[2025-11-26 05:40:39] 2025-11-26 10:40:05,316 | INFO     | . log creation = 2 s
[2025-11-26 05:40:39] 2025-11-26 10:40:05,316 | INFO     | ..............................
[2025-11-26 05:40:39] 2025-11-26 10:40:05,512 | INFO     | 
[2025-11-26 05:40:39] 2025-11-26 10:40:05,513 | INFO     | job summary report
[2025-11-26 05:40:39] 2025-11-26 10:40:05,513 | INFO     | --------------------------------------------------
[2025-11-26 05:40:39] 2025-11-26 10:40:05,513 | INFO     | PanDA job id: 6896243469
[2025-11-26 05:40:39] 2025-11-26 10:40:05,513 | INFO     | task id: 47556149
[2025-11-26 05:40:39] 2025-11-26 10:40:05,513 | INFO     | errors: (none)
[2025-11-26 05:40:39] 2025-11-26 10:40:05,513 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 05:40:39] 2025-11-26 10:40:05,513 | INFO     | pilot state: finished 
[2025-11-26 05:40:39] 2025-11-26 10:40:05,513 | INFO     | transexitcode: 0
[2025-11-26 05:40:39] 2025-11-26 10:40:05,513 | INFO     | exeerrorcode: 0
[2025-11-26 05:40:39] 2025-11-26 10:40:05,518 | INFO     | exeerrordiag: 
[2025-11-26 05:40:39] 2025-11-26 10:40:05,518 | INFO     | exitcode: 0
[2025-11-26 05:40:39] 2025-11-26 10:40:05,518 | INFO     | exitmsg: OK
[2025-11-26 05:40:39] 2025-11-26 10:40:05,518 | INFO     | cpuconsumptiontime: 239573 s
[2025-11-26 05:40:39] 2025-11-26 10:40:05,518 | INFO     | nevents: 1000
[2025-11-26 05:40:39] 2025-11-26 10:40:05,518 | INFO     | neventsw: 0
[2025-11-26 05:40:39] 2025-11-26 10:40:05,518 | INFO     | pid: 2182207
[2025-11-26 05:40:39] 2025-11-26 10:40:05,518 | INFO     | pgrp: 2182207
[2025-11-26 05:40:39] 2025-11-26 10:40:05,518 | INFO     | corecount: 8
[2025-11-26 05:40:39] 2025-11-26 10:40:05,518 | INFO     | event service: False
[2025-11-26 05:40:39] 2025-11-26 10:40:05,518 | INFO     | sizes: {0: 2284144, 1: 2284343, 4: 2284605, 11: 2284633, 52953: 2334368, 52960: 2343362, 52964: 2343546, 52973: 2343792}
[2025-11-26 05:40:39] 2025-11-26 10:40:05,518 | INFO     | --------------------------------------------------
[2025-11-26 05:40:39] 2025-11-26 10:40:05,519 | INFO     | 
[2025-11-26 05:40:39] 2025-11-26 10:40:05,519 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 05:40:39] 2025-11-26 10:40:05,556 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,556 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,556 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,556 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,557 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 05:40:39] 2025-11-26 10:40:05,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,558 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 05:40:39] 2025-11-26 10:40:05,558 | INFO     | job 6896243469 has completed (purged errors)
[2025-11-26 05:40:39] 2025-11-26 10:40:05,558 | INFO     | overall cleanup function is called
[2025-11-26 05:40:39] 2025-11-26 10:40:06,587 | INFO     | --- collectZombieJob: --- 10, [2182207]
[2025-11-26 05:40:39] 2025-11-26 10:40:06,588 | INFO     | zombie collector waiting for pid 2182207
[2025-11-26 05:40:39] 2025-11-26 10:40:06,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 05:40:39] 2025-11-26 10:40:06,588 | INFO     | collected zombie processes
[2025-11-26 05:40:39] 2025-11-26 10:40:06,588 | INFO     | will attempt to kill all subprocesses of pid=2182207
[2025-11-26 05:40:39] 2025-11-26 10:40:07,277 | INFO     | process IDs to be killed: [2182207] (in reverse order)
[2025-11-26 05:40:39] 2025-11-26 10:40:07,554 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 05:40:39] 2025-11-26 10:40:07,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 05:40:39] 2025-11-26 10:40:07,573 | INFO     | did not find any defunct processes belonging to 2182207
[2025-11-26 05:40:39] 2025-11-26 10:40:07,587 | INFO     | did not find any defunct processes belonging to 2182207
[2025-11-26 05:40:39] 2025-11-26 10:40:07,592 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 05:40:39] 2025-11-26 10:40:07,592 | INFO     | ready for new job
[2025-11-26 05:40:39] 2025-11-26 10:40:07,592 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 05:40:39] 2025-11-26 10:40:07,601 | INFO     | ***************************************
[2025-11-26 05:40:39] 2025-11-26 10:40:07,601 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 05:40:39] 2025-11-26 10:40:07,601 | INFO     | ***************************************
[2025-11-26 05:40:39] 2025-11-26 10:40:07,601 | INFO     | 
[2025-11-26 05:40:39] 2025-11-26 10:40:07,609 | INFO     | architecture information:
[2025-11-26 05:40:39] 2025-11-26 10:40:07,610 | INFO     | executing command: cat /etc/os-release
[2025-11-26 05:40:39] 2025-11-26 10:40:07,684 | INFO     | cat /etc/os-release:
[2025-11-26 05:40:39] NAME="CentOS Linux"
[2025-11-26 05:40:39] VERSION="7 (Core)"
[2025-11-26 05:40:39] ID="centos"
[2025-11-26 05:40:39] ID_LIKE="rhel fedora"
[2025-11-26 05:40:39] VERSION_ID="7"
[2025-11-26 05:40:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 05:40:39] ANSI_COLOR="0;31"
[2025-11-26 05:40:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 05:40:39] HOME_URL="https://www.centos.org/"
[2025-11-26 05:40:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 05:40:39] 
[2025-11-26 05:40:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 05:40:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 05:40:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 05:40:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 05:40:39] 
[2025-11-26 05:40:39] 2025-11-26 10:40:07,684 | INFO     | ***************************************
[2025-11-26 05:40:39] 2025-11-26 10:40:08,189 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 05:40:39] 2025-11-26 10:40:08,230 | INFO     | sufficient remaining disk space (67672997888 B)
[2025-11-26 05:40:39] 2025-11-26 10:40:08,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 05:40:39] 2025-11-26 10:40:08,231 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 05:40:39] 2025-11-26 10:40:08,231 | INFO     | update_server=False
[2025-11-26 05:40:39] 2025-11-26 10:40:08,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 05:40:39] 2025-11-26 10:40:08,231 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 05:40:39] 2025-11-26 10:40:08,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:40:39] 2025-11-26 10:40:08,486 | INFO     | aborting loop
[2025-11-26 05:40:39] 2025-11-26 10:40:08,763 | INFO     | all job control threads have been joined
[2025-11-26 05:40:39] 2025-11-26 10:40:08,764 | INFO     | all payload control threads have been joined
[2025-11-26 05:40:39] 2025-11-26 10:40:09,237 | INFO     | [job] retrieve thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:09,320 | INFO     | all data control threads have been joined
[2025-11-26 05:40:39] 2025-11-26 10:40:09,492 | INFO     | [job] job monitor thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:09,739 | INFO     | [data] copytool_in thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:09,752 | INFO     | [job] validate thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:09,764 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:09,770 | INFO     | [job] control thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:09,781 | INFO     | [payload] control thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:10,239 | INFO     | [data] copytool_out thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:10,250 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:10,281 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:10,327 | INFO     | [data] control thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:10,451 | INFO     | [payload] failed_post thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:10,459 | INFO     | [payload] validate_post thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:10,547 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:10,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:40:39] 2025-11-26 10:40:11,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 05:40:39] 2025-11-26 10:40:11,566 | INFO     | [job] queue monitor thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:15,095 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 05:40:39] 2025-11-26 10:40:28,823 | INFO     | [monitor] cgroup control has ended
[2025-11-26 05:40:39] 2025-11-26 10:40:30,327 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139988060751680)>', '<ExcThread(monitor, started 139987269969664)>']
[2025-11-26 05:40:39] 2025-11-26 10:40:35,351 | INFO     | all workflow threads have been joined
[2025-11-26 05:40:39] 2025-11-26 10:40:35,352 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 05:40:39] 2025-11-26 10:40:35,352 | INFO     | traces error code: 0
[2025-11-26 05:40:39] 2025-11-26 10:40:35,352 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 05:40:39] 2025-11-26 10:40:38,003 | INFO     | PID=2174611 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 05:40:39] 2025-11-26 10:40:38,016 | INFO     | .. there are 13 such processes running
[2025-11-26 05:40:39] 2025-11-26 10:40:38,025 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 05:40:39] 2025-11-26 10:40:38,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 05:40:39] 2025-11-26 10:40:38,025 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 05:40:39] 2025-11-26 10:40:38,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 05:40:39] 2025-11-26 10:40:38,025 | INFO     | [monitor] control thread has ended
[2025-11-26 05:40:39] 2025-11-26 10:40:38,739 [wrapper] ==== pilot stdout END ====
[2025-11-26 05:40:39] 2025-11-26 10:40:38,755 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 05:40:39] 2025-11-26 10:40:38,778 [wrapper] pilotpid: 2174611
[2025-11-26 05:40:39] 2025-11-26 10:40:38,799 [wrapper] Pilot exit status: 0
[2025-11-26 05:40:39] 2025-11-26 10:40:38,886 [wrapper] pandaids: 6896243469
[2025-11-26 05:40:39] 2025-11-26 10:40:38,962 [wrapper] cleanup supervisor_pilot 3514055 2174612
[2025-11-26 05:40:39] 2025-11-26 10:40:38,965 [wrapper] Test setup, not cleaning
[2025-11-26 05:40:39] 2025-11-26 10:40:38,968 [wrapper] apfmon messages muted
[2025-11-26 05:40:39] 2025-11-26 10:40:38,970 [wrapper] ==== wrapper stdout END ====
[2025-11-26 05:40:39] 2025-11-26 10:40:38,972 [wrapper] ==== wrapper stderr END ====
[2025-11-26 05:40:39]  *** Error codes and diagnostics ***
[2025-11-26 05:40:39]     "exeErrorCode": 0,
[2025-11-26 05:40:39]     "exeErrorDiag": "",
[2025-11-26 05:40:39]     "pilotErrorCode": 0,
[2025-11-26 05:40:39]     "pilotErrorDiag": "",
[2025-11-26 05:40:39]  *** Listing of results directory ***
[2025-11-26 05:40:39] total 1320556
[2025-11-26 05:40:39] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 16:08 pilot3.tar.gz
[2025-11-26 05:40:39] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 16:56 queuedata.json
[2025-11-26 05:40:39] -rwx------. 1 boincer umatlas     36292 Nov 24 16:57 runpilot2-wrapper.sh
[2025-11-26 05:40:39] -rw-r--r--. 1 boincer umatlas       100 Nov 25 14:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 05:40:39] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 14:56 run_atlas
[2025-11-26 05:40:39] -rw-r--r--. 1 boincer umatlas       105 Nov 25 14:56 job.xml
[2025-11-26 05:40:39] -rw-r--r--. 2 boincer umatlas 413193420 Nov 25 14:56 EVNT.47483658._001424.pool.root.1
[2025-11-26 05:40:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 14:56 start_atlas.sh
[2025-11-26 05:40:39] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 14:56 shared
[2025-11-26 05:40:39] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 14:56 input.tar.gz
[2025-11-26 05:40:39] -rw-r--r--. 1 boincer umatlas         0 Nov 25 14:56 boinc_lockfile
[2025-11-26 05:40:39] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 14:56 pandaJob.out
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas        57 Nov 25 14:56 setup.sh.local
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas    991893 Nov 25 14:56 agis_schedconf.cvmfs.json
[2025-11-26 05:40:39] drwx------. 5 boincer umatlas      4096 Nov 25 14:56 pilot3
[2025-11-26 05:40:39] -rw-r--r--. 1 boincer umatlas       533 Nov 26 05:30 boinc_task_state.xml
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas 917157355 Nov 26 05:39 HITS.47556149._004105.pool.root.1
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas      1056 Nov 26 05:39 memory_monitor_summary.json
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas   1516240 Nov 26 05:39 agis_ddmendpoints.agis.ALL.json
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas   2042101 Nov 26 05:39 log.47556149._004105.job.log.tgz.1
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas      8621 Nov 26 05:40 heartbeat.json
[2025-11-26 05:40:39] -rw-r--r--. 1 boincer umatlas      6842 Nov 26 05:40 init_data.xml
[2025-11-26 05:40:39] -rw-r--r--. 1 boincer umatlas        29 Nov 26 05:40 wrapper_checkpoint.txt
[2025-11-26 05:40:39] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 05:40 boinc_mmap_file
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas        95 Nov 26 05:40 pilot_heartbeat.json
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas       823 Nov 26 05:40 pilotlog.txt
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas   6945586 Nov 26 05:40 log.47556149._004105.job.log.1
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas       353 Nov 26 05:40 output.list
[2025-11-26 05:40:39] -rw-r--r--. 1 boincer umatlas       620 Nov 26 05:40 runtime_log
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas   9011200 Nov 26 05:40 result.tar.gz
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas       662 Nov 26 05:40 sxBMDmljth8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgDJKDmji42Wo.diag
[2025-11-26 05:40:39] -rw-r--r--. 1 boincer umatlas      9353 Nov 26 05:40 runtime_log.err
[2025-11-26 05:40:39] -rw-r--r--. 1 boincer umatlas     21345 Nov 26 05:40 stderr.txt
[2025-11-26 05:40:39] HITS file was successfully produced:
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas 917157355 Nov 26 05:39 shared/HITS.pool.root.1
[2025-11-26 05:40:39]  *** Contents of shared directory: ***
[2025-11-26 05:40:39] total 1308580
[2025-11-26 05:40:39] -rw-r--r--. 2 boincer umatlas 413193420 Nov 25 14:56 ATLAS.root_0
[2025-11-26 05:40:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 14:56 start_atlas.sh
[2025-11-26 05:40:39] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 14:56 input.tar.gz
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas 917157355 Nov 26 05:39 HITS.pool.root.1
[2025-11-26 05:40:39] -rw-------. 1 boincer umatlas   9011200 Nov 26 05:40 result.tar.gz
05:40:41 (2170942): run_atlas exited; CPU time 240256.088308
05:40:41 (2170942): called boinc_finish(0)

</stderr_txt>
]]>

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