Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:38:52 (23129): wrapper (7.7.26015): starting
14:38:52 (23129): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 14:38:52] Arguments: --nthreads 12
[2025-11-25 14:38:52] Threads: 12
[2025-11-25 14:38:52] Checking for CVMFS
[2025-11-25 14:38:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 14:38:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 14:38:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 14:38:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 14:38:53] 2.11.2.0 2979 286686 92828 153295 0 82 15734554 20275201 1 130560 1 128286621 99.975 16006436 13863 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 14:38:53] CVMFS is ok
[2025-11-25 14:38:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 14:38:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 14:38:53] Further information can be found at the LHC@home message board.
[2025-11-25 14:38:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 14:38:53] Checking for apptainer binary...
[2025-11-25 14:38:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 14:38:53] Running /usr/bin/apptainer --version
[2025-11-25 14:38:53] apptainer version 1.3.2-1.el7
[2025-11-25 14:38:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 14:38:54] c-205-21.aglt2.org
[2025-11-25 14:38:54] apptainer works
[2025-11-25 14:38:54] Set ATHENA_PROC_NUMBER=12
[2025-11-25 14:38:54] Set ATHENA_CORE_NUMBER=12
[2025-11-25 14:38:54] Starting ATLAS job with PandaID=6896243380
[2025-11-25 14:38:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 21:47:58]  *** The last 200 lines of the pilot log: ***
[2025-11-25 21:47:58] 2025-11-26 02:47:00,422 | INFO     | number of running child processes to parent process 895: 1
[2025-11-25 21:47:58] 2025-11-26 02:47:00,422 | INFO     | maximum number of monitored processes: 18
[2025-11-25 21:47:58] 2025-11-26 02:47:00,606 | INFO     | time since job start (25670s) is within the limit (172800.0s)
[2025-11-25 21:47:58] 2025-11-26 02:47:02,066 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 21:47:58] 2025-11-26 02:47:02,070 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-11-25 21:47:58] 2025-11-26 02:47:02,072 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896243380/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 21:47:58] 2025-11-26 02:47:02,072 | INFO     | extracted standard info from prmon json
[2025-11-25 21:47:58] 2025-11-26 02:47:02,072 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 21:47:58] 2025-11-26 02:47:02,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 21:47:58] 2025-11-26 02:47:02,079 | INFO     | fitting pss+swap vs Time
[2025-11-25 21:47:58] 2025-11-26 02:47:02,079 | INFO     | sum of square deviations: 23137444266.280205
[2025-11-25 21:47:58] 2025-11-26 02:47:02,083 | INFO     | sum of deviations: 335206101515.4841
[2025-11-25 21:47:58] 2025-11-26 02:47:02,084 | INFO     | mean x: 1764112390.1805227
[2025-11-25 21:47:58] 2025-11-26 02:47:02,084 | INFO     | mean y: 3427479.888361045
[2025-11-25 21:47:58] 2025-11-26 02:47:02,084 | INFO     | intersect: -25554332060.968876
[2025-11-25 21:47:58] 2025-11-26 02:47:02,084 | INFO     | chi2: 6.001431103617648
[2025-11-25 21:47:58] 2025-11-26 02:47:02,085 | INFO     | sum of square deviations: 22322828916.115467
[2025-11-25 21:47:58] 2025-11-26 02:47:02,088 | INFO     | sum of deviations: 505071447970.221
[2025-11-25 21:47:58] 2025-11-26 02:47:02,089 | INFO     | mean x: 1764112237.6826923
[2025-11-25 21:47:58] 2025-11-26 02:47:02,089 | INFO     | mean y: 3459250.266826923
[2025-11-25 21:47:58] 2025-11-26 02:47:02,089 | INFO     | intersect: -39910958658.70816
[2025-11-25 21:47:58] 2025-11-26 02:47:02,089 | INFO     | chi2: 2.7065012580978576
[2025-11-25 21:47:58] 2025-11-26 02:47:02,089 | INFO     | current chi2=2.7065012580978576 (change=54.90240225424924 %)
[2025-11-25 21:47:58] 2025-11-26 02:47:02,090 | INFO     | sum of square deviations: 21527562765.946396
[2025-11-25 21:47:58] 2025-11-26 02:47:02,094 | INFO     | sum of deviations: 544945150909.6109
[2025-11-25 21:47:58] 2025-11-26 02:47:02,094 | INFO     | mean x: 1764112085.1849148
[2025-11-25 21:47:58] 2025-11-26 02:47:02,094 | INFO     | mean y: 3466856.1630170317
[2025-11-25 21:47:58] 2025-11-26 02:47:02,094 | INFO     | intersect: -44652973677.05306
[2025-11-25 21:47:58] 2025-11-26 02:47:02,094 | INFO     | chi2: 2.323157423031505
[2025-11-25 21:47:58] 2025-11-26 02:47:02,094 | INFO     | current chi2=2.323157423031505 (change=14.163815143975528 %)
[2025-11-25 21:47:58] 2025-11-26 02:47:02,095 | INFO     | right removable region: 410
[2025-11-25 21:47:58] 2025-11-26 02:47:02,095 | INFO     | sum of square deviations: 22322807992.478394
[2025-11-25 21:47:58] 2025-11-26 02:47:02,099 | INFO     | sum of deviations: 205553539397.83914
[2025-11-25 21:47:58] 2025-11-26 02:47:02,099 | INFO     | mean x: 1764112542.6802886
[2025-11-25 21:47:58] 2025-11-26 02:47:02,099 | INFO     | mean y: 3451662.675480769
[2025-11-25 21:47:58] 2025-11-26 02:47:02,099 | INFO     | intersect: -16240901519.33632
[2025-11-25 21:47:58] 2025-11-26 02:47:02,100 | INFO     | chi2: 3.8248661448225905
[2025-11-25 21:47:58] 2025-11-26 02:47:02,100 | INFO     | current chi2=3.8248661448225905 (change=36.26743223767127 %)
[2025-11-25 21:47:58] 2025-11-26 02:47:02,100 | INFO     | sum of square deviations: 21527495787.31406
[2025-11-25 21:47:58] 2025-11-26 02:47:02,104 | INFO     | sum of deviations: 173672880506.75867
[2025-11-25 21:47:58] 2025-11-26 02:47:02,104 | INFO     | mean x: 1764112695.1824818
[2025-11-25 21:47:58] 2025-11-26 02:47:02,104 | INFO     | mean y: 3457768.2165450123
[2025-11-25 21:47:58] 2025-11-26 02:47:02,104 | INFO     | intersect: -14228505686.233599
[2025-11-25 21:47:58] 2025-11-26 02:47:02,105 | INFO     | chi2: 3.770542477440696
[2025-11-25 21:47:58] 2025-11-26 02:47:02,105 | INFO     | current chi2=3.770542477440696 (change=1.420276300529571 %)
[2025-11-25 21:47:58] 2025-11-26 02:47:02,105 | INFO     | left removable region: 20
[2025-11-25 21:47:58] 2025-11-26 02:47:02,105 | INFO     | sum of square deviations: 18393403472.207714
[2025-11-25 21:47:58] 2025-11-26 02:47:02,109 | INFO     | sum of deviations: 341941205596.015
[2025-11-25 21:47:58] 2025-11-26 02:47:02,109 | INFO     | mean x: 1764112664.6846154
[2025-11-25 21:47:58] 2025-11-26 02:47:02,109 | INFO     | mean y: 3506431.902564103
[2025-11-25 21:47:58] 2025-11-26 02:47:02,109 | INFO     | intersect: -32792099464.57662
[2025-11-25 21:47:58] 2025-11-26 02:47:02,109 | INFO     | chi2: 0.03645836837122188
[2025-11-25 21:47:58] 2025-11-26 02:47:02,110 | INFO     | current memory leak: 18.59 B/s (using 390 data points, chi2=0.04)
[2025-11-25 21:47:58] 2025-11-26 02:47:02,110 | INFO     | could have reported an average CPU frequency of 2351 MHz (18 samples)
[2025-11-25 21:47:58] 2025-11-26 02:47:02,110 | INFO     | ..............................
[2025-11-25 21:47:58] 2025-11-26 02:47:02,110 | INFO     | . Timing measurements:
[2025-11-25 21:47:58] 2025-11-26 02:47:02,110 | INFO     | . get job = 0 s
[2025-11-25 21:47:58] 2025-11-26 02:47:02,110 | INFO     | . initial setup = 2 s
[2025-11-25 21:47:58] 2025-11-26 02:47:02,111 | INFO     | . payload setup = 7 s
[2025-11-25 21:47:58] 2025-11-26 02:47:02,111 | INFO     | . stage-in = 0 s
[2025-11-25 21:47:58] 2025-11-26 02:47:02,111 | INFO     | . payload execution = 25638 s
[2025-11-25 21:47:58] 2025-11-26 02:47:02,111 | INFO     | . stage-out = 3 s
[2025-11-25 21:47:58] 2025-11-26 02:47:02,111 | INFO     | . log creation = 0 s
[2025-11-25 21:47:58] 2025-11-26 02:47:02,111 | INFO     | ..............................
[2025-11-25 21:47:58] 2025-11-26 02:47:02,199 | INFO     | 
[2025-11-25 21:47:58] 2025-11-26 02:47:02,199 | INFO     | job summary report
[2025-11-25 21:47:58] 2025-11-26 02:47:02,199 | INFO     | --------------------------------------------------
[2025-11-25 21:47:58] 2025-11-26 02:47:02,199 | INFO     | PanDA job id: 6896243380
[2025-11-25 21:47:58] 2025-11-26 02:47:02,200 | INFO     | task id: 47556149
[2025-11-25 21:47:58] 2025-11-26 02:47:02,200 | INFO     | errors: (none)
[2025-11-25 21:47:58] 2025-11-26 02:47:02,200 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 21:47:58] 2025-11-26 02:47:02,200 | INFO     | pilot state: finished 
[2025-11-25 21:47:58] 2025-11-26 02:47:02,200 | INFO     | transexitcode: 0
[2025-11-25 21:47:58] 2025-11-26 02:47:02,200 | INFO     | exeerrorcode: 0
[2025-11-25 21:47:58] 2025-11-26 02:47:02,201 | INFO     | exeerrordiag: 
[2025-11-25 21:47:58] 2025-11-26 02:47:02,201 | INFO     | exitcode: 0
[2025-11-25 21:47:58] 2025-11-26 02:47:02,201 | INFO     | exitmsg: OK
[2025-11-25 21:47:58] 2025-11-26 02:47:02,201 | INFO     | cpuconsumptiontime: 294318 s
[2025-11-25 21:47:58] 2025-11-26 02:47:02,201 | INFO     | nevents: 1000
[2025-11-25 21:47:58] 2025-11-26 02:47:02,201 | INFO     | neventsw: 0
[2025-11-25 21:47:58] 2025-11-26 02:47:02,201 | INFO     | pid: 895
[2025-11-25 21:47:58] 2025-11-26 02:47:02,202 | INFO     | pgrp: 895
[2025-11-25 21:47:58] 2025-11-26 02:47:02,202 | INFO     | corecount: 12
[2025-11-25 21:47:58] 2025-11-26 02:47:02,202 | INFO     | event service: False
[2025-11-25 21:47:58] 2025-11-26 02:47:02,202 | INFO     | sizes: {0: 2284314, 5: 2284576, 11: 2284632, 25646: 2321840, 25647: 2321839, 25650: 2331073, 25655: 2331263}
[2025-11-25 21:47:58] 2025-11-26 02:47:02,202 | INFO     | --------------------------------------------------
[2025-11-25 21:47:58] 2025-11-26 02:47:02,202 | INFO     | 
[2025-11-25 21:47:58] 2025-11-26 02:47:02,203 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 21:47:58] 2025-11-26 02:47:02,227 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,227 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,227 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,227 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,227 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,228 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,228 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,228 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,228 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,228 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,228 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,230 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 21:47:58] 2025-11-26 02:47:02,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,230 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 21:47:58] 2025-11-26 02:47:02,230 | INFO     | job 6896243380 has completed (purged errors)
[2025-11-25 21:47:58] 2025-11-26 02:47:02,230 | INFO     | overall cleanup function is called
[2025-11-25 21:47:58] 2025-11-26 02:47:03,248 | INFO     | --- collectZombieJob: --- 10, [895]
[2025-11-25 21:47:58] 2025-11-26 02:47:03,248 | INFO     | zombie collector waiting for pid 895
[2025-11-25 21:47:58] 2025-11-26 02:47:03,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 21:47:58] 2025-11-26 02:47:03,248 | INFO     | collected zombie processes
[2025-11-25 21:47:58] 2025-11-26 02:47:03,248 | INFO     | will attempt to kill all subprocesses of pid=895
[2025-11-25 21:47:58] 2025-11-26 02:47:03,341 | INFO     | process IDs to be killed: [895] (in reverse order)
[2025-11-25 21:47:58] 2025-11-26 02:47:03,391 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 21:47:58] 2025-11-26 02:47:03,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 21:47:58] 2025-11-26 02:47:03,396 | INFO     | did not find any defunct processes belonging to 895
[2025-11-25 21:47:58] 2025-11-26 02:47:03,399 | INFO     | did not find any defunct processes belonging to 895
[2025-11-25 21:47:58] 2025-11-26 02:47:03,402 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 21:47:58] 2025-11-26 02:47:03,402 | INFO     | ready for new job
[2025-11-25 21:47:58] 2025-11-26 02:47:03,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 21:47:58] 2025-11-26 02:47:03,404 | INFO     | ***************************************
[2025-11-25 21:47:58] 2025-11-26 02:47:03,404 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 21:47:58] 2025-11-26 02:47:03,404 | INFO     | ***************************************
[2025-11-25 21:47:58] 2025-11-26 02:47:03,404 | INFO     | 
[2025-11-25 21:47:58] 2025-11-26 02:47:03,405 | INFO     | architecture information:
[2025-11-25 21:47:58] 2025-11-26 02:47:03,406 | INFO     | executing command: cat /etc/os-release
[2025-11-25 21:47:58] 2025-11-26 02:47:03,419 | INFO     | cat /etc/os-release:
[2025-11-25 21:47:58] NAME="CentOS Linux"
[2025-11-25 21:47:58] VERSION="7 (Core)"
[2025-11-25 21:47:58] ID="centos"
[2025-11-25 21:47:58] ID_LIKE="rhel fedora"
[2025-11-25 21:47:58] VERSION_ID="7"
[2025-11-25 21:47:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 21:47:58] ANSI_COLOR="0;31"
[2025-11-25 21:47:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 21:47:58] HOME_URL="https://www.centos.org/"
[2025-11-25 21:47:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 21:47:58] 
[2025-11-25 21:47:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 21:47:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 21:47:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 21:47:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 21:47:58] 
[2025-11-25 21:47:58] 2025-11-26 02:47:03,420 | INFO     | ***************************************
[2025-11-25 21:47:58] 2025-11-26 02:47:03,923 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 21:47:58] 2025-11-26 02:47:03,939 | INFO     | sufficient remaining disk space (28242345984 B)
[2025-11-25 21:47:58] 2025-11-26 02:47:03,939 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 21:47:58] 2025-11-26 02:47:03,939 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 21:47:58] 2025-11-26 02:47:03,939 | INFO     | update_server=False
[2025-11-25 21:47:58] 2025-11-26 02:47:03,940 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 21:47:58] 2025-11-26 02:47:03,940 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:47:58] 2025-11-26 02:47:03,940 | INFO     | aborting loop
[2025-11-25 21:47:58] 2025-11-26 02:47:03,940 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 21:47:58] 2025-11-26 02:47:03,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:47:58] 2025-11-26 02:47:04,398 | INFO     | all data control threads have been joined
[2025-11-25 21:47:58] 2025-11-26 02:47:04,943 | INFO     | [job] job monitor thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:04,945 | INFO     | [job] retrieve thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:04,946 | INFO     | [job] queue monitor thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:05,022 | INFO     | all payload control threads have been joined
[2025-11-25 21:47:58] 2025-11-26 02:47:05,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 21:47:58] 2025-11-26 02:47:05,246 | INFO     | all job control threads have been joined
[2025-11-25 21:47:58] 2025-11-26 02:47:05,254 | INFO     | [job] validate thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:05,342 | INFO     | [data] copytool_in thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:05,403 | INFO     | [data] control thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:05,413 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:05,556 | INFO     | [payload] failed_post thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:05,624 | INFO     | [payload] validate_post thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:05,744 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:06,027 | INFO     | [payload] control thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:06,251 | INFO     | [job] control thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:06,264 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:07,189 | INFO     | [data] copytool_out thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:07,944 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:14,337 | INFO     | job.realtimelogging is not enabled
[2025-11-25 21:47:58] 2025-11-26 02:47:15,339 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 21:47:58] 2025-11-26 02:47:33,806 | INFO     | PID=26872 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 21:47:58] 2025-11-26 02:47:33,806 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 21:47:58] 2025-11-26 02:47:33,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 21:47:58] 2025-11-26 02:47:33,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 21:47:58] 2025-11-26 02:47:52,024 | INFO     | [monitor] cgroup control has ended
[2025-11-25 21:47:58] 2025-11-26 02:47:53,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139694082860864)>', '<ExcThread(monitor, started 139693031139072)>']
[2025-11-25 21:47:58] 2025-11-26 02:47:53,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 21:47:58] 2025-11-26 02:47:53,906 | INFO     | [monitor] control thread has ended
[2025-11-25 21:47:58] 2025-11-26 02:47:58,045 | INFO     | all workflow threads have been joined
[2025-11-25 21:47:58] 2025-11-26 02:47:58,045 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 21:47:58] 2025-11-26 02:47:58,046 | INFO     | traces error code: 0
[2025-11-25 21:47:58] 2025-11-26 02:47:58,046 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 21:47:58] 2025-11-26 02:47:58,135 [wrapper] ==== pilot stdout END ====
[2025-11-25 21:47:58] 2025-11-26 02:47:58,139 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 21:47:58] 2025-11-26 02:47:58,143 [wrapper] pilotpid: 26872
[2025-11-25 21:47:58] 2025-11-26 02:47:58,147 [wrapper] Pilot exit status: 0
[2025-11-25 21:47:58] 2025-11-26 02:47:58,161 [wrapper] pandaids: 6896243380
[2025-11-25 21:47:58] 2025-11-26 02:47:58,209 [wrapper] cleanup supervisor_pilot  8945 26873
[2025-11-25 21:47:58] 2025-11-26 02:47:58,213 [wrapper] Test setup, not cleaning
[2025-11-25 21:47:58] 2025-11-26 02:47:58,217 [wrapper] apfmon messages muted
[2025-11-25 21:47:58] 2025-11-26 02:47:58,221 [wrapper] ==== wrapper stdout END ====
[2025-11-25 21:47:58] 2025-11-26 02:47:58,225 [wrapper] ==== wrapper stderr END ====
[2025-11-25 21:47:58]  *** Error codes and diagnostics ***
[2025-11-25 21:47:58]     "exeErrorCode": 0,
[2025-11-25 21:47:58]     "exeErrorDiag": "",
[2025-11-25 21:47:58]     "pilotErrorCode": 0,
[2025-11-25 21:47:58]     "pilotErrorDiag": "",
[2025-11-25 21:47:58]  *** Listing of results directory ***
[2025-11-25 21:47:58] total 1310204
[2025-11-25 21:47:58] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 16:08 pilot3.tar.gz
[2025-11-25 21:47:58] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 16:46 queuedata.json
[2025-11-25 21:47:58] -rwx------ 1 boincer umatlas     36292 Nov 24 16:46 runpilot2-wrapper.sh
[2025-11-25 21:47:58] -rw-r--r-- 1 boincer umatlas       100 Nov 25 14:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 21:47:58] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 14:38 run_atlas
[2025-11-25 21:47:58] -rw-r--r-- 1 boincer umatlas       105 Nov 25 14:38 job.xml
[2025-11-25 21:47:58] -rw-r--r-- 2 boincer umatlas 410184991 Nov 25 14:38 EVNT.47483658._001420.pool.root.1
[2025-11-25 21:47:58] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 14:38 start_atlas.sh
[2025-11-25 21:47:58] drwxrwx--x 2 boincer umatlas      4096 Nov 25 14:38 shared
[2025-11-25 21:47:58] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 14:38 input.tar.gz
[2025-11-25 21:47:58] -rw-r--r-- 1 boincer umatlas         0 Nov 25 14:38 boinc_lockfile
[2025-11-25 21:47:58] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 14:38 pandaJob.out
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas        57 Nov 25 14:38 setup.sh.local
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas    991893 Nov 25 14:39 agis_schedconf.cvmfs.json
[2025-11-25 21:47:58] drwx------ 5 boincer umatlas      4096 Nov 25 14:39 pilot3
[2025-11-25 21:47:58] -rw-r--r-- 1 boincer umatlas      5956 Nov 25 21:36 init_data.xml
[2025-11-25 21:47:58] -rw-r--r-- 1 boincer umatlas       532 Nov 25 21:38 boinc_task_state.xml
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas 916009789 Nov 25 21:46 HITS.47556149._004069.pool.root.1
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas      1061 Nov 25 21:46 memory_monitor_summary.json
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas   1516240 Nov 25 21:46 agis_ddmendpoints.agis.ALL.json
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas   2182231 Nov 25 21:46 log.47556149._004069.job.log.tgz.1
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas      8677 Nov 25 21:47 heartbeat.json
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas        95 Nov 25 21:47 pilot_heartbeat.json
[2025-11-25 21:47:58] -rw-r--r-- 1 boincer umatlas        29 Nov 25 21:47 wrapper_checkpoint.txt
[2025-11-25 21:47:58] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 21:47 boinc_mmap_file
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas      4818 Nov 25 21:47 pilotlog.txt
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas   3586762 Nov 25 21:47 log.47556149._004069.job.log.1
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas       353 Nov 25 21:47 output.list
[2025-11-25 21:47:58] -rw-r--r-- 1 boincer umatlas       620 Nov 25 21:47 runtime_log
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas   5785600 Nov 25 21:47 result.tar.gz
[2025-11-25 21:47:58] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 21:47 runtime_log.err
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas       670 Nov 25 21:47 gndMDmmZth8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKwLKDm97TKnm.diag
[2025-11-25 21:47:58] -rw-r--r-- 1 boincer umatlas     21229 Nov 25 21:47 stderr.txt
[2025-11-25 21:47:58] HITS file was successfully produced:
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas 916009789 Nov 25 21:46 shared/HITS.pool.root.1
[2025-11-25 21:47:58]  *** Contents of shared directory: ***
[2025-11-25 21:47:58] total 1301368
[2025-11-25 21:47:58] -rw-r--r-- 2 boincer umatlas 410184991 Nov 25 14:38 ATLAS.root_0
[2025-11-25 21:47:58] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 14:38 start_atlas.sh
[2025-11-25 21:47:58] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 14:38 input.tar.gz
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas 916009789 Nov 25 21:46 HITS.pool.root.1
[2025-11-25 21:47:58] -rw------- 1 boincer umatlas   5785600 Nov 25 21:47 result.tar.gz
21:48:00 (23129): run_atlas exited; CPU time 286804.599874
21:48:00 (23129): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN