Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:11:28 (3270616): wrapper (7.7.26015): starting
19:11:28 (3270616): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 19:11:28] Arguments: --nthreads 9
[2025-11-25 19:11:28] Threads: 9
[2025-11-25 19:11:28] Checking for CVMFS
[2025-11-25 19:11:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:11:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:11:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:11:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:11:29] 2.13.2.0 5795 32173 185196 153302 3 569 35013036 39288832 9066 16776704 0 23017305 99.577 21878931 36538 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 19:11:29] CVMFS is ok
[2025-11-25 19:11:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:11:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:11:29] Further information can be found at the LHC@home message board.
[2025-11-25 19:11:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:11:29] Checking for apptainer binary...
[2025-11-25 19:11:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:11:29] Running /usr/bin/apptainer --version
[2025-11-25 19:11:29] apptainer version 1.4.4-1.el9
[2025-11-25 19:11:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:11:29] c-210-14.aglt2.org
[2025-11-25 19:11:29] apptainer works
[2025-11-25 19:11:29] Set ATHENA_PROC_NUMBER=9
[2025-11-25 19:11:29] Set ATHENA_CORE_NUMBER=9
[2025-11-25 19:11:29] Starting ATLAS job with PandaID=6895371412
[2025-11-25 19:11:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:22:50]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:22:50] 2025-11-27 02:22:11,463 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 21:22:50] 2025-11-27 02:22:12,377 | INFO     | time since job start (94230s) is within the limit (172800.0s)
[2025-11-26 21:22:50] 2025-11-27 02:22:13,497 | INFO     | monitor loop #6026: job 0:6895371412 is in state 'finished'
[2025-11-26 21:22:50] 2025-11-27 02:22:13,497 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:22:50] 2025-11-27 02:22:13,835 | INFO     | PID=3274275 has CPU usage=16.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 21:22:50] 2025-11-27 02:22:13,835 | INFO     | .. there are 8 such processes running
[2025-11-26 21:22:50] 2025-11-27 02:22:14,836 | INFO     | time since job start (94232s) is within the limit (172800.0s)
[2025-11-26 21:22:50] 2025-11-27 02:22:16,003 | INFO     | monitor loop #6027: job 0:6895371412 is in state 'finished'
[2025-11-26 21:22:50] 2025-11-27 02:22:16,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:22:50] 2025-11-27 02:22:16,842 | INFO     | time since job start (94234s) is within the limit (172800.0s)
[2025-11-26 21:22:50] 2025-11-27 02:22:17,725 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 21:22:50] 2025-11-27 02:22:17,736 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1761999999994
[2025-11-26 21:22:50] 2025-11-27 02:22:17,751 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895371412/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:22:50] 2025-11-27 02:22:17,752 | INFO     | extracted standard info from prmon json
[2025-11-26 21:22:50] 2025-11-27 02:22:17,752 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:22:50] 2025-11-27 02:22:17,752 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:22:50] 2025-11-27 02:22:17,781 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:22:50] 2025-11-27 02:22:17,783 | INFO     | sum of square deviations: 1142146688378.7637
[2025-11-26 21:22:50] 2025-11-27 02:22:17,842 | INFO     | sum of deviations: 4022291165377.4785
[2025-11-26 21:22:50] 2025-11-27 02:22:17,842 | INFO     | mean x: 1764163008.0123057
[2025-11-26 21:22:50] 2025-11-27 02:22:17,842 | INFO     | mean y: 3130291.396373057
[2025-11-26 21:22:50] 2025-11-27 02:22:17,842 | INFO     | intersect: -6209712028.784182
[2025-11-26 21:22:50] 2025-11-27 02:22:17,844 | INFO     | chi2: 10.885189704290022
[2025-11-26 21:22:50] 2025-11-27 02:22:17,847 | INFO     | sum of square deviations: 1131093104962.7246
[2025-11-26 21:22:50] 2025-11-27 02:22:17,906 | INFO     | sum of deviations: 4627094594270.948
[2025-11-26 21:22:50] 2025-11-27 02:22:17,906 | INFO     | mean x: 1764162855.5042236
[2025-11-26 21:22:50] 2025-11-27 02:22:17,907 | INFO     | mean y: 3138637.545159194
[2025-11-26 21:22:50] 2025-11-27 02:22:17,907 | INFO     | intersect: -7213728281.987697
[2025-11-26 21:22:50] 2025-11-27 02:22:17,909 | INFO     | chi2: 7.2649961946912995
[2025-11-26 21:22:50] 2025-11-27 02:22:17,909 | INFO     | current chi2=7.2649961946912995 (change=33.25797352132456 %)
[2025-11-26 21:22:50] 2025-11-27 02:22:17,912 | INFO     | sum of square deviations: 1120111104283.9749
[2025-11-26 21:22:50] 2025-11-27 02:22:17,970 | INFO     | sum of deviations: 4954763369981.576
[2025-11-26 21:22:50] 2025-11-27 02:22:17,970 | INFO     | mean x: 1764162702.9960887
[2025-11-26 21:22:50] 2025-11-27 02:22:17,970 | INFO     | mean y: 3143187.9282920468
[2025-11-26 21:22:50] 2025-11-27 02:22:17,970 | INFO     | intersect: -7800554772.088228
[2025-11-26 21:22:50] 2025-11-27 02:22:17,973 | INFO     | chi2: 6.07627053320583
[2025-11-26 21:22:50] 2025-11-27 02:22:17,973 | INFO     | current chi2=6.07627053320583 (change=16.362371426348428 %)
[2025-11-26 21:22:50] 2025-11-27 02:22:17,973 | INFO     | right removable region: 1533
[2025-11-26 21:22:50] 2025-11-27 02:22:17,975 | INFO     | sum of square deviations: 1131086970236.6975
[2025-11-26 21:22:50] 2025-11-27 02:22:18,034 | INFO     | sum of deviations: 3559556409090.2485
[2025-11-26 21:22:50] 2025-11-27 02:22:18,034 | INFO     | mean x: 1764163160.5627031
[2025-11-26 21:22:50] 2025-11-27 02:22:18,035 | INFO     | mean y: 3136669.2514619883
[2025-11-26 21:22:50] 2025-11-27 02:22:18,035 | INFO     | intersect: -5548724902.938489
[2025-11-26 21:22:50] 2025-11-27 02:22:18,037 | INFO     | chi2: 8.702902391572964
[2025-11-26 21:22:50] 2025-11-27 02:22:18,037 | INFO     | current chi2=8.702902391572964 (change=20.04822490008589 %)
[2025-11-26 21:22:50] 2025-11-27 02:22:18,037 | INFO     | left removable region: 10
[2025-11-26 21:22:50] 2025-11-27 02:22:18,040 | INFO     | sum of square deviations: 1096189845475.6033
[2025-11-26 21:22:50] 2025-11-27 02:22:18,098 | INFO     | sum of deviations: 4412481143661.434
[2025-11-26 21:22:50] 2025-11-27 02:22:18,098 | INFO     | mean x: 1764162977.5929086
[2025-11-26 21:22:50] 2025-11-27 02:22:18,098 | INFO     | mean y: 3152614.1135915956
[2025-11-26 21:22:50] 2025-11-27 02:22:18,098 | INFO     | intersect: -7098113562.637875
[2025-11-26 21:22:50] 2025-11-27 02:22:18,100 | INFO     | chi2: 3.5363478137882236
[2025-11-26 21:22:50] 2025-11-27 02:22:18,101 | INFO     | current memory leak: 4.03 B/s (using 1523 data points, chi2=3.54)
[2025-11-26 21:22:50] 2025-11-27 02:22:18,102 | INFO     | could have reported an average CPU frequency of 2591 MHz (55 samples)
[2025-11-26 21:22:50] 2025-11-27 02:22:18,102 | INFO     | ..............................
[2025-11-26 21:22:50] 2025-11-27 02:22:18,103 | INFO     | . Timing measurements:
[2025-11-26 21:22:50] 2025-11-27 02:22:18,103 | INFO     | . get job = 0 s
[2025-11-26 21:22:50] 2025-11-27 02:22:18,103 | INFO     | . initial setup = 2 s
[2025-11-26 21:22:50] 2025-11-27 02:22:18,103 | INFO     | . payload setup = 6 s
[2025-11-26 21:22:50] 2025-11-27 02:22:18,103 | INFO     | . stage-in = 0 s
[2025-11-26 21:22:50] 2025-11-27 02:22:18,103 | INFO     | . payload execution = 94196 s
[2025-11-26 21:22:50] 2025-11-27 02:22:18,103 | INFO     | . stage-out = 5 s
[2025-11-26 21:22:50] 2025-11-27 02:22:18,103 | INFO     | . log creation = 1 s
[2025-11-26 21:22:50] 2025-11-27 02:22:18,103 | INFO     | ..............................
[2025-11-26 21:22:50] 2025-11-27 02:22:18,211 | INFO     | 
[2025-11-26 21:22:50] 2025-11-27 02:22:18,211 | INFO     | job summary report
[2025-11-26 21:22:50] 2025-11-27 02:22:18,211 | INFO     | --------------------------------------------------
[2025-11-26 21:22:50] 2025-11-27 02:22:18,212 | INFO     | PanDA job id: 6895371412
[2025-11-26 21:22:50] 2025-11-27 02:22:18,212 | INFO     | task id: 47556149
[2025-11-26 21:22:50] 2025-11-27 02:22:18,212 | INFO     | errors: (none)
[2025-11-26 21:22:50] 2025-11-27 02:22:18,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:22:50] 2025-11-27 02:22:18,212 | INFO     | pilot state: finished 
[2025-11-26 21:22:50] 2025-11-27 02:22:18,212 | INFO     | transexitcode: 0
[2025-11-26 21:22:50] 2025-11-27 02:22:18,212 | INFO     | exeerrorcode: 0
[2025-11-26 21:22:50] 2025-11-27 02:22:18,212 | INFO     | exeerrordiag: 
[2025-11-26 21:22:50] 2025-11-27 02:22:18,212 | INFO     | exitcode: 0
[2025-11-26 21:22:50] 2025-11-27 02:22:18,212 | INFO     | exitmsg: OK
[2025-11-26 21:22:50] 2025-11-27 02:22:18,213 | INFO     | cpuconsumptiontime: 306162 s
[2025-11-26 21:22:50] 2025-11-27 02:22:18,213 | INFO     | nevents: 1000
[2025-11-26 21:22:50] 2025-11-27 02:22:18,213 | INFO     | neventsw: 0
[2025-11-26 21:22:50] 2025-11-27 02:22:18,213 | INFO     | pid: 3281893
[2025-11-26 21:22:50] 2025-11-27 02:22:18,213 | INFO     | pgrp: 3281893
[2025-11-26 21:22:50] 2025-11-27 02:22:18,213 | INFO     | corecount: 9
[2025-11-26 21:22:50] 2025-11-27 02:22:18,213 | INFO     | event service: False
[2025-11-26 21:22:50] 2025-11-27 02:22:18,213 | INFO     | sizes: {0: 2284037, 1: 2284292, 5: 2284554, 12: 2284610, 94203: 2354428, 94209: 2363422, 94212: 2363606, 94219: 2363852}
[2025-11-26 21:22:50] 2025-11-27 02:22:18,213 | INFO     | --------------------------------------------------
[2025-11-26 21:22:50] 2025-11-27 02:22:18,214 | INFO     | 
[2025-11-26 21:22:50] 2025-11-27 02:22:18,214 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 21:22:50] 2025-11-27 02:22:18,292 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,293 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,293 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,311 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:22:50] 2025-11-27 02:22:18,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,311 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:22:50] 2025-11-27 02:22:18,312 | INFO     | job 6895371412 has completed (purged errors)
[2025-11-26 21:22:50] 2025-11-27 02:22:18,312 | INFO     | overall cleanup function is called
[2025-11-26 21:22:50] 2025-11-27 02:22:19,344 | INFO     | --- collectZombieJob: --- 10, [3281893]
[2025-11-26 21:22:50] 2025-11-27 02:22:19,344 | INFO     | zombie collector waiting for pid 3281893
[2025-11-26 21:22:50] 2025-11-27 02:22:19,344 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:22:50] 2025-11-27 02:22:19,344 | INFO     | collected zombie processes
[2025-11-26 21:22:50] 2025-11-27 02:22:19,344 | INFO     | will attempt to kill all subprocesses of pid=3281893
[2025-11-26 21:22:50] 2025-11-27 02:22:19,598 | INFO     | process IDs to be killed: [3281893] (in reverse order)
[2025-11-26 21:22:50] 2025-11-27 02:22:19,777 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:22:50] 2025-11-27 02:22:19,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:22:50] 2025-11-27 02:22:19,786 | INFO     | did not find any defunct processes belonging to 3281893
[2025-11-26 21:22:50] 2025-11-27 02:22:19,794 | INFO     | did not find any defunct processes belonging to 3281893
[2025-11-26 21:22:50] 2025-11-27 02:22:19,796 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:22:50] 2025-11-27 02:22:19,796 | INFO     | ready for new job
[2025-11-26 21:22:50] 2025-11-27 02:22:19,796 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:22:50] 2025-11-27 02:22:19,804 | INFO     | ***************************************
[2025-11-26 21:22:50] 2025-11-27 02:22:19,804 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:22:50] 2025-11-27 02:22:19,804 | INFO     | ***************************************
[2025-11-26 21:22:50] 2025-11-27 02:22:19,804 | INFO     | 
[2025-11-26 21:22:50] 2025-11-27 02:22:19,806 | INFO     | architecture information:
[2025-11-26 21:22:50] 2025-11-27 02:22:19,807 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:22:50] 2025-11-27 02:22:19,824 | INFO     | cat /etc/os-release:
[2025-11-26 21:22:50] NAME="CentOS Linux"
[2025-11-26 21:22:50] VERSION="7 (Core)"
[2025-11-26 21:22:50] ID="centos"
[2025-11-26 21:22:50] ID_LIKE="rhel fedora"
[2025-11-26 21:22:50] VERSION_ID="7"
[2025-11-26 21:22:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:22:50] ANSI_COLOR="0;31"
[2025-11-26 21:22:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:22:50] HOME_URL="https://www.centos.org/"
[2025-11-26 21:22:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:22:50] 
[2025-11-26 21:22:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:22:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:22:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:22:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:22:50] 
[2025-11-26 21:22:50] 2025-11-27 02:22:19,824 | INFO     | ***************************************
[2025-11-26 21:22:50] 2025-11-27 02:22:20,327 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 21:22:50] 2025-11-27 02:22:20,364 | INFO     | sufficient remaining disk space (49789534208 B)
[2025-11-26 21:22:50] 2025-11-27 02:22:20,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:22:50] 2025-11-27 02:22:20,365 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:22:50] 2025-11-27 02:22:20,365 | INFO     | update_server=False
[2025-11-26 21:22:50] 2025-11-27 02:22:20,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:22:50] 2025-11-27 02:22:20,367 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:22:50] 2025-11-27 02:22:20,367 | INFO     | aborting loop
[2025-11-26 21:22:50] 2025-11-27 02:22:20,696 | INFO     | all job control threads have been joined
[2025-11-26 21:22:50] 2025-11-27 02:22:20,696 | INFO     | all payload control threads have been joined
[2025-11-26 21:22:50] 2025-11-27 02:22:21,103 | INFO     | all data control threads have been joined
[2025-11-26 21:22:50] 2025-11-27 02:22:21,371 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:21,373 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:21,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:22:50] 2025-11-27 02:22:21,410 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:21,445 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:21,558 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:21,648 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:22:50] 2025-11-27 02:22:21,701 | INFO     | [job] control thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:21,702 | INFO     | [payload] control thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:22,109 | INFO     | [data] control thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:22,490 | INFO     | [job] validate thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:22,514 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:22,595 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:22,666 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:22,905 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:23,226 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:22:50] 2025-11-27 02:22:23,401 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:24,231 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:25,656 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:22:50] 2025-11-27 02:22:30,992 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:22:50] 2025-11-27 02:22:31,901 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413007370048)>', '<ExcThread(monitor, started 140412505270016)>']
[2025-11-26 21:22:50] 2025-11-27 02:22:36,927 | INFO     | all workflow threads have been joined
[2025-11-26 21:22:50] 2025-11-27 02:22:36,927 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:22:50] 2025-11-27 02:22:36,927 | INFO     | traces error code: 0
[2025-11-26 21:22:50] 2025-11-27 02:22:36,928 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:22:50] 2025-11-27 02:22:50,376 | INFO     | PID=3274275 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:22:50] 2025-11-27 02:22:50,377 | INFO     | .. there are 8 such processes running
[2025-11-26 21:22:50] 2025-11-27 02:22:50,378 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:22:50] 2025-11-27 02:22:50,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:22:50] 2025-11-27 02:22:50,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:22:50] 2025-11-27 02:22:50,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:22:50] 2025-11-27 02:22:50,378 | INFO     | [monitor] control thread has ended
[2025-11-26 21:22:50] 2025-11-27 02:22:50,684 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:22:50] 2025-11-27 02:22:50,687 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:22:50] 2025-11-27 02:22:50,689 [wrapper] pilotpid: 3274275
[2025-11-26 21:22:50] 2025-11-27 02:22:50,692 [wrapper] Pilot exit status: 0
[2025-11-26 21:22:50] 2025-11-27 02:22:50,706 [wrapper] pandaids: 6895371412
[2025-11-26 21:22:50] 2025-11-27 02:22:50,769 [wrapper] cleanup supervisor_pilot 1414359 3274276
[2025-11-26 21:22:50] 2025-11-27 02:22:50,772 [wrapper] Test setup, not cleaning
[2025-11-26 21:22:50] 2025-11-27 02:22:50,775 [wrapper] apfmon messages muted
[2025-11-26 21:22:50] 2025-11-27 02:22:50,778 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:22:50] 2025-11-27 02:22:50,780 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:22:50]  *** Error codes and diagnostics ***
[2025-11-26 21:22:50]     "exeErrorCode": 0,
[2025-11-26 21:22:50]     "exeErrorDiag": "",
[2025-11-26 21:22:50]     "pilotErrorCode": 0,
[2025-11-26 21:22:50]     "pilotErrorDiag": "",
[2025-11-26 21:22:50]  *** Listing of results directory ***
[2025-11-26 21:22:50] total 1317172
[2025-11-26 21:22:50] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 15:16 pilot3.tar.gz
[2025-11-26 21:22:50] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 15:40 queuedata.json
[2025-11-26 21:22:50] -rwx------. 1 boincer umatlas     36292 Nov 23 15:40 runpilot2-wrapper.sh
[2025-11-26 21:22:50] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:22:50] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:11 run_atlas
[2025-11-26 21:22:50] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:11 job.xml
[2025-11-26 21:22:50] -rw-r--r--. 2 boincer umatlas 410517669 Nov 25 19:11 EVNT.47483658._001193.pool.root.1
[2025-11-26 21:22:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:11 start_atlas.sh
[2025-11-26 21:22:50] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:11 shared
[2025-11-26 21:22:50] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 19:11 input.tar.gz
[2025-11-26 21:22:50] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:11 boinc_lockfile
[2025-11-26 21:22:50] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 19:11 pandaJob.out
[2025-11-26 21:22:50] -rw-------. 1 boincer umatlas        57 Nov 25 19:11 setup.sh.local
[2025-11-26 21:22:50] -rw-------. 1 boincer umatlas    991877 Nov 25 19:11 agis_schedconf.cvmfs.json
[2025-11-26 21:22:50] drwx------. 5 boincer umatlas      4096 Nov 25 19:11 pilot3
[2025-11-26 21:22:50] -rw-r--r--. 1 boincer umatlas       533 Nov 26 20:53 boinc_task_state.xml
[2025-11-26 21:22:50] -rw-r--r--. 1 boincer umatlas      6661 Nov 26 21:19 init_data.xml
[2025-11-26 21:22:50] -rw-------. 1 boincer umatlas 904247121 Nov 26 21:21 HITS.47556149._001796.pool.root.1
[2025-11-26 21:22:50] -rw-------. 1 boincer umatlas      1057 Nov 26 21:22 memory_monitor_summary.json
[2025-11-26 21:22:50] -rw-------. 1 boincer umatlas   1516240 Nov 26 21:22 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:22:50] -rw-------. 1 boincer umatlas   2671595 Nov 26 21:22 log.47556149._001796.job.log.tgz.1
[2025-11-26 21:22:50] -rw-------. 1 boincer umatlas      8617 Nov 26 21:22 heartbeat.json
[2025-11-26 21:22:50] -rw-------. 1 boincer umatlas       822 Nov 26 21:22 pilotlog.txt
[2025-11-26 21:22:50] -rw-------. 1 boincer umatlas        95 Nov 26 21:22 pilot_heartbeat.json
[2025-11-26 21:22:50] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 21:22 boinc_mmap_file
[2025-11-26 21:22:50] -rw-------. 1 boincer umatlas  12377414 Nov 26 21:22 log.47556149._001796.job.log.1
[2025-11-26 21:22:50] -rw-------. 1 boincer umatlas       353 Nov 26 21:22 output.list
[2025-11-26 21:22:50] -rw-r--r--. 1 boincer umatlas       620 Nov 26 21:22 runtime_log
[2025-11-26 21:22:50] -rw-------. 1 boincer umatlas  15073280 Nov 26 21:22 result.tar.gz
[2025-11-26 21:22:50] -rw-r--r--. 1 boincer umatlas        29 Nov 26 21:22 wrapper_checkpoint.txt
[2025-11-26 21:22:50] -rw-------. 1 boincer umatlas       660 Nov 26 21:22 YyDLDm53Vh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrBLKDmCOvnBo.diag
[2025-11-26 21:22:50] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 21:22 runtime_log.err
[2025-11-26 21:22:50] -rw-r--r--. 1 boincer umatlas     21719 Nov 26 21:22 stderr.txt
[2025-11-26 21:22:51] HITS file was successfully produced:
[2025-11-26 21:22:51] -rw-------. 1 boincer umatlas 904247121 Nov 26 21:21 shared/HITS.pool.root.1
[2025-11-26 21:22:51]  *** Contents of shared directory: ***
[2025-11-26 21:22:51] total 1299276
[2025-11-26 21:22:51] -rw-r--r--. 2 boincer umatlas 410517669 Nov 25 19:11 ATLAS.root_0
[2025-11-26 21:22:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:11 start_atlas.sh
[2025-11-26 21:22:51] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 19:11 input.tar.gz
[2025-11-26 21:22:51] -rw-------. 1 boincer umatlas 904247121 Nov 26 21:21 HITS.pool.root.1
[2025-11-26 21:22:51] -rw-------. 1 boincer umatlas  15073280 Nov 26 21:22 result.tar.gz
21:22:52 (3270616): run_atlas exited; CPU time 307563.074599
21:22:52 (3270616): called boinc_finish(0)

</stderr_txt>
]]>

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