Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:16 (3096725): wrapper (7.7.26015): starting
13:59:16 (3096725): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 13:59:16] Arguments: --nthreads 9
[2025-11-25 13:59:16] Threads: 9
[2025-11-25 13:59:16] Checking for CVMFS
[2025-11-25 13:59:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 13:59:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 13:59:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 13:59:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 13:59:18] 2.13.3.0 5308 7386 225628 153293 3 446 31194522 32935936 22392 16776704 0 19505787 99.385 35069376 40264 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 13:59:18] CVMFS is ok
[2025-11-25 13:59:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:59:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:59:18] Further information can be found at the LHC@home message board.
[2025-11-25 13:59:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:59:18] Checking for apptainer binary...
[2025-11-25 13:59:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 13:59:18] Running /usr/bin/apptainer --version
[2025-11-25 13:59:18] apptainer version 1.4.4-1.el9
[2025-11-25 13:59:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:59:18] c6-1-24-1.aglt2.org
[2025-11-25 13:59:18] apptainer works
[2025-11-25 13:59:18] Set ATHENA_PROC_NUMBER=9
[2025-11-25 13:59:18] Set ATHENA_CORE_NUMBER=9
[2025-11-25 13:59:18] Starting ATLAS job with PandaID=6895382863
[2025-11-25 13:59:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:55:56]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:55:56] 2025-11-27 03:54:46,383 | INFO     | monitor loop #7088: job 0:6895382863 is in state 'finished'
[2025-11-26 22:55:56] 2025-11-27 03:54:46,383 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 22:55:56] 2025-11-27 03:54:46,618 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 22:55:56] 2025-11-27 03:54:46,622 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2804.2208214285715
[2025-11-26 22:55:56] 2025-11-27 03:54:46,632 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895382863/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 22:55:56] 2025-11-27 03:54:46,633 | INFO     | extracted standard info from prmon json
[2025-11-26 22:55:56] 2025-11-27 03:54:46,633 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 22:55:56] 2025-11-27 03:54:46,633 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 22:55:56] 2025-11-27 03:54:46,666 | INFO     | fitting pss+swap vs Time
[2025-11-26 22:55:56] 2025-11-27 03:54:46,668 | INFO     | sum of square deviations: 2263946649679.6504
[2025-11-26 22:55:56] 2025-11-27 03:54:46,947 | INFO     | sum of deviations: 9827599439030.25
[2025-11-26 22:55:56] 2025-11-27 03:54:46,947 | INFO     | mean x: 1764156479.986598
[2025-11-26 22:55:56] 2025-11-27 03:54:46,947 | INFO     | mean y: 3116467.355154639
[2025-11-26 22:55:56] 2025-11-27 03:54:46,947 | INFO     | intersect: -7654936444.594482
[2025-11-26 22:55:56] 2025-11-27 03:54:46,949 | INFO     | chi2: 14.721841358517
[2025-11-26 22:55:56] 2025-11-27 03:54:46,951 | INFO     | sum of square deviations: 2246487164703.5703
[2025-11-26 22:55:56] 2025-11-27 03:54:47,033 | INFO     | sum of deviations: 10576163484964.484
[2025-11-26 22:55:56] 2025-11-27 03:54:47,033 | INFO     | mean x: 1764156327.4904392
[2025-11-26 22:55:56] 2025-11-27 03:54:47,033 | INFO     | mean y: 3123005.456847545
[2025-11-26 22:55:56] 2025-11-27 03:54:47,033 | INFO     | intersect: -8302290898.40376
[2025-11-26 22:55:56] 2025-11-27 03:54:47,035 | INFO     | chi2: 11.217493511071321
[2025-11-26 22:55:56] 2025-11-27 03:54:47,036 | INFO     | current chi2=11.217493511071321 (change=23.803733256630395 %)
[2025-11-26 22:55:56] 2025-11-27 03:54:47,036 | INFO     | right removable region: 1934
[2025-11-26 22:55:56] 2025-11-27 03:54:47,038 | INFO     | sum of square deviations: 2246485405463.5713
[2025-11-26 22:55:56] 2025-11-27 03:54:47,117 | INFO     | sum of deviations: 8963160357133.402
[2025-11-26 22:55:56] 2025-11-27 03:54:47,118 | INFO     | mean x: 1764156632.4904392
[2025-11-26 22:55:56] 2025-11-27 03:54:47,118 | INFO     | mean y: 3124016.562273902
[2025-11-26 22:55:56] 2025-11-27 03:54:47,118 | INFO     | intersect: -7035612470.955351
[2025-11-26 22:55:56] 2025-11-27 03:54:47,120 | INFO     | chi2: 10.335068673050216
[2025-11-26 22:55:56] 2025-11-27 03:54:47,120 | INFO     | current chi2=10.335068673050216 (change=29.79771740937089 %)
[2025-11-26 22:55:56] 2025-11-27 03:54:47,122 | INFO     | sum of square deviations: 2229114162934.938
[2025-11-26 22:55:56] 2025-11-27 03:54:47,191 | INFO     | sum of deviations: 8241345302967.999
[2025-11-26 22:55:56] 2025-11-27 03:54:47,191 | INFO     | mean x: 1764156784.9943006
[2025-11-26 22:55:56] 2025-11-27 03:54:47,191 | INFO     | mean y: 3130352.637823834
[2025-11-26 22:55:56] 2025-11-27 03:54:47,192 | INFO     | intersect: -6519202812.465421
[2025-11-26 22:55:56] 2025-11-27 03:54:47,194 | INFO     | chi2: 7.364449980645736
[2025-11-26 22:55:56] 2025-11-27 03:54:47,194 | INFO     | current chi2=7.364449980645736 (change=28.74309582625883 %)
[2025-11-26 22:55:56] 2025-11-27 03:54:47,196 | INFO     | sum of square deviations: 2211833278185.2095
[2025-11-26 22:55:56] 2025-11-27 03:54:47,269 | INFO     | sum of deviations: 7962418420709.777
[2025-11-26 22:55:56] 2025-11-27 03:54:47,269 | INFO     | mean x: 1764156937.4955845
[2025-11-26 22:55:56] 2025-11-27 03:54:47,269 | INFO     | mean y: 3132812.977142857
[2025-11-26 22:55:56] 2025-11-27 03:54:47,269 | INFO     | intersect: -6347687492.820587
[2025-11-26 22:55:56] 2025-11-27 03:54:47,271 | INFO     | chi2: 6.962423222797732
[2025-11-26 22:55:56] 2025-11-27 03:54:47,271 | INFO     | current chi2=6.962423222797732 (change=5.45901946383718 %)
[2025-11-26 22:55:56] 2025-11-27 03:54:47,272 | INFO     | left removable region: 30
[2025-11-26 22:55:56] 2025-11-27 03:54:47,274 | INFO     | sum of square deviations: 2140232208098.9277
[2025-11-26 22:55:56] 2025-11-27 03:54:47,332 | INFO     | time since job start (118478s) is within the limit (172800.0s)
[2025-11-26 22:55:56] 2025-11-27 03:54:47,379 | INFO     | sum of deviations: 8425210299591.505
[2025-11-26 22:55:56] 2025-11-27 03:54:47,379 | INFO     | mean x: 1764157211.9942226
[2025-11-26 22:55:56] 2025-11-27 03:54:47,379 | INFO     | mean y: 3144957.319327731
[2025-11-26 22:55:56] 2025-11-27 03:54:47,379 | INFO     | intersect: -6941613399.436198
[2025-11-26 22:55:56] 2025-11-27 03:54:47,382 | INFO     | chi2: 2.4390050488073594
[2025-11-26 22:55:56] 2025-11-27 03:54:47,382 | INFO     | current memory leak: 3.94 B/s (using 1904 data points, chi2=2.44)
[2025-11-26 22:55:56] 2025-11-27 03:54:47,384 | INFO     | could have reported an average CPU frequency of 2918 MHz (68 samples)
[2025-11-26 22:55:56] 2025-11-27 03:54:47,384 | INFO     | ..............................
[2025-11-26 22:55:56] 2025-11-27 03:54:47,385 | INFO     | . Timing measurements:
[2025-11-26 22:55:56] 2025-11-27 03:54:47,385 | INFO     | . get job = 0 s
[2025-11-26 22:55:56] 2025-11-27 03:54:47,385 | INFO     | . initial setup = 4 s
[2025-11-26 22:55:56] 2025-11-27 03:54:47,385 | INFO     | . payload setup = 42 s
[2025-11-26 22:55:56] 2025-11-27 03:54:47,385 | INFO     | . stage-in = 0 s
[2025-11-26 22:55:56] 2025-11-27 03:54:47,385 | INFO     | . payload execution = 118351 s
[2025-11-26 22:55:56] 2025-11-27 03:54:47,385 | INFO     | . stage-out = 4 s
[2025-11-26 22:55:56] 2025-11-27 03:54:47,385 | INFO     | . log creation = 1 s
[2025-11-26 22:55:56] 2025-11-27 03:54:47,385 | INFO     | ..............................
[2025-11-26 22:55:56] 2025-11-27 03:54:47,489 | INFO     | 
[2025-11-26 22:55:56] 2025-11-27 03:54:47,489 | INFO     | job summary report
[2025-11-26 22:55:56] 2025-11-27 03:54:47,489 | INFO     | --------------------------------------------------
[2025-11-26 22:55:56] 2025-11-27 03:54:47,489 | INFO     | PanDA job id: 6895382863
[2025-11-26 22:55:56] 2025-11-27 03:54:47,489 | INFO     | task id: 47556137
[2025-11-26 22:55:56] 2025-11-27 03:54:47,489 | INFO     | errors: (none)
[2025-11-26 22:55:56] 2025-11-27 03:54:47,489 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 22:55:56] 2025-11-27 03:54:47,489 | INFO     | pilot state: finished 
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | transexitcode: 0
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | exeerrorcode: 0
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | exeerrordiag: 
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | exitcode: 0
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | exitmsg: OK
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | cpuconsumptiontime: 259705 s
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | nevents: 1000
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | neventsw: 0
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | pid: 3119371
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | pgrp: 3119371
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | corecount: 9
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | event service: False
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | sizes: {0: 2283486, 1: 2284171, 2: 2284370, 13: 2284370, 24: 2284426, 28: 2284716, 35: 2284872, 118398: 2364874, 118403: 2373868, 118405: 2373924, 118417: 2374170}
[2025-11-26 22:55:56] 2025-11-27 03:54:47,490 | INFO     | --------------------------------------------------
[2025-11-26 22:55:56] 2025-11-27 03:54:47,491 | INFO     | 
[2025-11-26 22:55:56] 2025-11-27 03:54:47,491 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 22:55:56] 2025-11-27 03:54:47,511 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,512 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,513 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 22:55:56] 2025-11-27 03:54:47,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 22:55:56] 2025-11-27 03:54:47,513 | INFO     | job 6895382863 has completed (purged errors)
[2025-11-26 22:55:56] 2025-11-27 03:54:47,513 | INFO     | overall cleanup function is called
[2025-11-26 22:55:56] 2025-11-27 03:54:48,530 | INFO     | --- collectZombieJob: --- 10, [3119371]
[2025-11-26 22:55:56] 2025-11-27 03:54:48,530 | INFO     | zombie collector waiting for pid 3119371
[2025-11-26 22:55:56] 2025-11-27 03:54:48,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 22:55:56] 2025-11-27 03:54:48,530 | INFO     | collected zombie processes
[2025-11-26 22:55:56] 2025-11-27 03:54:48,530 | INFO     | will attempt to kill all subprocesses of pid=3119371
[2025-11-26 22:55:56] 2025-11-27 03:54:48,919 | INFO     | process IDs to be killed: [3119371] (in reverse order)
[2025-11-26 22:55:56] 2025-11-27 03:54:49,036 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 22:55:56] 2025-11-27 03:54:49,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 22:55:56] 2025-11-27 03:54:49,051 | INFO     | did not find any defunct processes belonging to 3119371
[2025-11-26 22:55:56] 2025-11-27 03:54:49,065 | INFO     | did not find any defunct processes belonging to 3119371
[2025-11-26 22:55:56] 2025-11-27 03:54:49,067 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 22:55:56] 2025-11-27 03:54:49,067 | INFO     | ready for new job
[2025-11-26 22:55:56] 2025-11-27 03:54:49,067 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 22:55:56] 2025-11-27 03:54:49,075 | INFO     | ***************************************
[2025-11-26 22:55:56] 2025-11-27 03:54:49,075 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 22:55:56] 2025-11-27 03:54:49,075 | INFO     | ***************************************
[2025-11-26 22:55:56] 2025-11-27 03:54:49,075 | INFO     | 
[2025-11-26 22:55:56] 2025-11-27 03:54:49,078 | INFO     | architecture information:
[2025-11-26 22:55:56] 2025-11-27 03:54:49,078 | INFO     | executing command: cat /etc/os-release
[2025-11-26 22:55:56] 2025-11-27 03:54:49,100 | INFO     | cat /etc/os-release:
[2025-11-26 22:55:56] NAME="CentOS Linux"
[2025-11-26 22:55:56] VERSION="7 (Core)"
[2025-11-26 22:55:56] ID="centos"
[2025-11-26 22:55:56] ID_LIKE="rhel fedora"
[2025-11-26 22:55:56] VERSION_ID="7"
[2025-11-26 22:55:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 22:55:56] ANSI_COLOR="0;31"
[2025-11-26 22:55:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 22:55:56] HOME_URL="https://www.centos.org/"
[2025-11-26 22:55:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 22:55:56] 
[2025-11-26 22:55:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 22:55:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 22:55:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 22:55:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 22:55:56] 
[2025-11-26 22:55:56] 2025-11-27 03:54:49,100 | INFO     | ***************************************
[2025-11-26 22:55:56] 2025-11-27 03:54:49,613 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 22:55:56] 2025-11-27 03:54:49,655 | INFO     | sufficient remaining disk space (72252129280 B)
[2025-11-26 22:55:56] 2025-11-27 03:54:49,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 22:55:56] 2025-11-27 03:54:49,655 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 22:55:56] 2025-11-27 03:54:49,656 | INFO     | update_server=False
[2025-11-26 22:55:56] 2025-11-27 03:54:49,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 22:55:56] 2025-11-27 03:54:49,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:55:56] 2025-11-27 03:54:49,918 | INFO     | aborting loop
[2025-11-26 22:55:56] 2025-11-27 03:54:50,109 | INFO     | all job control threads have been joined
[2025-11-26 22:55:56] 2025-11-27 03:54:50,172 | INFO     | all payload control threads have been joined
[2025-11-26 22:55:56] 2025-11-27 03:54:50,287 | INFO     | all data control threads have been joined
[2025-11-26 22:55:56] 2025-11-27 03:54:50,290 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:55:56] 2025-11-27 03:54:50,661 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:50,797 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:50,924 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:50,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:55:56] 2025-11-27 03:54:51,115 | INFO     | [job] control thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:51,162 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:51,178 | INFO     | [payload] control thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:51,193 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:51,292 | INFO     | [data] control thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:51,422 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:51,435 | INFO     | [job] validate thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:51,463 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:51,899 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:51,958 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:52,503 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:55:56] 2025-11-27 03:54:52,958 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:53,509 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:54:54,299 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:55:56] 2025-11-27 03:55:21,336 | INFO     | PID=3101783 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 22:55:56] 2025-11-27 03:55:21,336 | INFO     | .. there are 31 such processes running
[2025-11-26 22:55:56] 2025-11-27 03:55:21,337 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:55:56] 2025-11-27 03:55:21,337 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:55:56] 2025-11-27 03:55:21,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:55:56] 2025-11-27 03:55:48,524 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:55:56] 2025-11-27 03:55:50,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940280624960)>', '<ExcThread(monitor, started 139939563960064)>']
[2025-11-26 22:55:56] 2025-11-27 03:55:50,534 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:55:56] 2025-11-27 03:55:50,534 | INFO     | [monitor] control thread has ended
[2025-11-26 22:55:56] 2025-11-27 03:55:55,261 | INFO     | all workflow threads have been joined
[2025-11-26 22:55:56] 2025-11-27 03:55:55,261 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:55:56] 2025-11-27 03:55:55,262 | INFO     | traces error code: 0
[2025-11-26 22:55:56] 2025-11-27 03:55:55,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:55:56] 2025-11-27 03:55:55,545 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:55:56] 2025-11-27 03:55:55,548 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:55:56] 2025-11-27 03:55:55,550 [wrapper] pilotpid: 3101783
[2025-11-26 22:55:56] 2025-11-27 03:55:55,553 [wrapper] Pilot exit status: 0
[2025-11-26 22:55:56] 2025-11-27 03:55:55,625 [wrapper] pandaids: 6895382863
[2025-11-26 22:55:56] 2025-11-27 03:55:55,705 [wrapper] cleanup supervisor_pilot 1151846 3101784
[2025-11-26 22:55:56] 2025-11-27 03:55:55,709 [wrapper] Test setup, not cleaning
[2025-11-26 22:55:56] 2025-11-27 03:55:55,712 [wrapper] apfmon messages muted
[2025-11-26 22:55:56] 2025-11-27 03:55:55,714 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:55:56] 2025-11-27 03:55:55,717 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:55:56]  *** Error codes and diagnostics ***
[2025-11-26 22:55:56]     "exeErrorCode": 0,
[2025-11-26 22:55:56]     "exeErrorDiag": "",
[2025-11-26 22:55:56]     "pilotErrorCode": 0,
[2025-11-26 22:55:56]     "pilotErrorDiag": "",
[2025-11-26 22:55:56]  *** Listing of results directory ***
[2025-11-26 22:55:56] total 1340176
[2025-11-26 22:55:56] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 22:19 pilot3.tar.gz
[2025-11-26 22:55:56] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 22:36 queuedata.json
[2025-11-26 22:55:56] -rwx------. 1 boincer umatlas     36292 Nov 23 22:36 runpilot2-wrapper.sh
[2025-11-26 22:55:56] -rw-r--r--. 1 boincer umatlas       100 Nov 25 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:55:56] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 13:59 run_atlas
[2025-11-26 22:55:56] -rw-r--r--. 1 boincer umatlas       105 Nov 25 13:59 job.xml
[2025-11-26 22:55:56] -rw-r--r--. 2 boincer umatlas 410222329 Nov 25 13:59 EVNT.47483658._000998.pool.root.1
[2025-11-26 22:55:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 13:59 start_atlas.sh
[2025-11-26 22:55:56] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 13:59 shared
[2025-11-26 22:55:56] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 13:59 input.tar.gz
[2025-11-26 22:55:56] -rw-r--r--. 1 boincer umatlas         0 Nov 25 13:59 boinc_lockfile
[2025-11-26 22:55:56] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 13:59 pandaJob.out
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas        57 Nov 25 13:59 setup.sh.local
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas    991543 Nov 25 14:00 agis_schedconf.cvmfs.json
[2025-11-26 22:55:56] drwx------. 5 boincer umatlas      4096 Nov 25 14:00 pilot3
[2025-11-26 22:55:56] -rw-r--r--. 1 boincer umatlas       533 Nov 26 22:34 boinc_task_state.xml
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas 922564272 Nov 26 22:53 HITS.47556137._009850.pool.root.1
[2025-11-26 22:55:56] -rw-r--r--. 1 boincer umatlas      6842 Nov 26 22:54 init_data.xml
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas      1068 Nov 26 22:54 memory_monitor_summary.json
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas   1516240 Nov 26 22:54 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas   2946450 Nov 26 22:54 log.47556137._009850.job.log.tgz.1
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas      8641 Nov 26 22:54 heartbeat.json
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas        95 Nov 26 22:55 pilot_heartbeat.json
[2025-11-26 22:55:56] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 22:55 boinc_mmap_file
[2025-11-26 22:55:56] -rw-r--r--. 1 boincer umatlas        29 Nov 26 22:55 wrapper_checkpoint.txt
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas      4824 Nov 26 22:55 pilotlog.txt
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas  14870464 Nov 26 22:55 log.47556137._009850.job.log.1
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas       353 Nov 26 22:55 output.list
[2025-11-26 22:55:56] -rw-r--r--. 1 boincer umatlas       620 Nov 26 22:55 runtime_log
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas  17838080 Nov 26 22:55 result.tar.gz
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas       667 Nov 26 22:55 XbOMDmtYch8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmotIKDmQKUy5m.diag
[2025-11-26 22:55:56] -rw-r--r--. 1 boincer umatlas      9349 Nov 26 22:55 runtime_log.err
[2025-11-26 22:55:56] -rw-r--r--. 1 boincer umatlas     21378 Nov 26 22:55 stderr.txt
[2025-11-26 22:55:56] HITS file was successfully produced:
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas 922564272 Nov 26 22:53 shared/HITS.pool.root.1
[2025-11-26 22:55:56]  *** Contents of shared directory: ***
[2025-11-26 22:55:56] total 1319572
[2025-11-26 22:55:56] -rw-r--r--. 2 boincer umatlas 410222329 Nov 25 13:59 ATLAS.root_0
[2025-11-26 22:55:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 13:59 start_atlas.sh
[2025-11-26 22:55:56] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 13:59 input.tar.gz
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas 922564272 Nov 26 22:53 HITS.pool.root.1
[2025-11-26 22:55:56] -rw-------. 1 boincer umatlas  17838080 Nov 26 22:55 result.tar.gz
22:55:58 (3096725): run_atlas exited; CPU time 262514.207183
22:55:58 (3096725): called boinc_finish(0)

</stderr_txt>
]]>

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