Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:55:40 (504392): wrapper (7.7.26015): starting
23:55:40 (504392): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 23:55:40] Arguments: --nthreads 8
[2025-11-25 23:55:40] Threads: 8
[2025-11-25 23:55:40] Checking for CVMFS
[2025-11-25 23:55:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:55:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:55:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:55:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:55:42] 2.13.2.0 5678 32449 179812 153309 3 268 36559427 39288833 5043 16776704 0 24460790 99.751 15255253 34166 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 23:55:42] CVMFS is ok
[2025-11-25 23:55:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:55:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:55:42] Further information can be found at the LHC@home message board.
[2025-11-25 23:55:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:55:42] Checking for apptainer binary...
[2025-11-25 23:55:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:55:42] Running /usr/bin/apptainer --version
[2025-11-25 23:55:42] apptainer version 1.4.4-1.el9
[2025-11-25 23:55:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:55:43] c-210-21.aglt2.org
[2025-11-25 23:55:43] apptainer works
[2025-11-25 23:55:43] Set ATHENA_PROC_NUMBER=8
[2025-11-25 23:55:43] Set ATHENA_CORE_NUMBER=8
[2025-11-25 23:55:43] Starting ATLAS job with PandaID=6895476663
[2025-11-25 23:55:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:15:33]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:15:33] 2025-11-27 23:14:20,066 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 18:15:33] 2025-11-27 23:14:20,094 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2550.1786000000006
[2025-11-27 18:15:33] 2025-11-27 23:14:20,116 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895476663/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 18:15:33] 2025-11-27 23:14:20,119 | INFO     | extracted standard info from prmon json
[2025-11-27 18:15:33] 2025-11-27 23:14:20,120 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 18:15:33] 2025-11-27 23:14:20,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:15:33] 2025-11-27 23:14:20,194 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:15:33] 2025-11-27 23:14:20,205 | INFO     | sum of square deviations: 4810342797036.325
[2025-11-27 18:15:33] 2025-11-27 23:14:20,583 | INFO     | sum of deviations: 14632624383571.646
[2025-11-27 18:15:33] 2025-11-27 23:14:20,583 | INFO     | mean x: 1764209172.9835606
[2025-11-27 18:15:33] 2025-11-27 23:14:20,588 | INFO     | mean y: 2970579.6263031275
[2025-11-27 18:15:33] 2025-11-27 23:14:20,588 | INFO     | intersect: -5363592938.097375
[2025-11-27 18:15:33] 2025-11-27 23:14:20,596 | INFO     | chi2: 12.986383804910016
[2025-11-27 18:15:33] 2025-11-27 23:14:20,600 | INFO     | sum of square deviations: 4781473989498.177
[2025-11-27 18:15:33] 2025-11-27 23:14:20,868 | INFO     | time since job start (152260s) is within the limit (172800.0s)
[2025-11-27 18:15:33] 2025-11-27 23:14:20,991 | INFO     | sum of deviations: 15509947994894.744
[2025-11-27 18:15:33] 2025-11-27 23:14:20,992 | INFO     | mean x: 1764209020.4945762
[2025-11-27 18:15:33] 2025-11-27 23:14:20,992 | INFO     | mean y: 2975213.128565689
[2025-11-27 18:15:33] 2025-11-27 23:14:20,992 | INFO     | intersect: -5719693198.347377
[2025-11-27 18:15:33] 2025-11-27 23:14:20,998 | INFO     | chi2: 9.712005182404871
[2025-11-27 18:15:33] 2025-11-27 23:14:20,999 | INFO     | current chi2=9.712005182404871 (change=25.21393693344514 %)
[2025-11-27 18:15:33] 2025-11-27 23:14:21,006 | INFO     | monitor loop #9037: job 0:6895476663 is in state 'finished'
[2025-11-27 18:15:33] 2025-11-27 23:14:21,006 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:15:33] 2025-11-27 23:14:21,005 | INFO     | sum of square deviations: 4752720799874.936
[2025-11-27 18:15:33] 2025-11-27 23:14:21,183 | INFO     | sum of deviations: 16209193489378.879
[2025-11-27 18:15:33] 2025-11-27 23:14:21,183 | INFO     | mean x: 1764208868.0052335
[2025-11-27 18:15:33] 2025-11-27 23:14:21,183 | INFO     | mean y: 2978920.468599034
[2025-11-27 18:15:33] 2025-11-27 23:14:21,184 | INFO     | intersect: -6013869975.415924
[2025-11-27 18:15:33] 2025-11-27 23:14:21,187 | INFO     | chi2: 7.437901357967852
[2025-11-27 18:15:33] 2025-11-27 23:14:21,188 | INFO     | current chi2=7.437901357967852 (change=23.41538932204224 %)
[2025-11-27 18:15:33] 2025-11-27 23:14:21,188 | INFO     | right removable region: 2483
[2025-11-27 18:15:33] 2025-11-27 23:14:21,192 | INFO     | sum of square deviations: 4781465647138.169
[2025-11-27 18:15:33] 2025-11-27 23:14:21,363 | INFO     | sum of deviations: 13704239070402.158
[2025-11-27 18:15:33] 2025-11-27 23:14:21,364 | INFO     | mean x: 1764209325.4945762
[2025-11-27 18:15:33] 2025-11-27 23:14:21,364 | INFO     | mean y: 2975481.97468863
[2025-11-27 18:15:33] 2025-11-27 23:14:21,364 | INFO     | intersect: -5053454523.181003
[2025-11-27 18:15:33] 2025-11-27 23:14:21,368 | INFO     | chi2: 9.663751483143283
[2025-11-27 18:15:33] 2025-11-27 23:14:21,368 | INFO     | current chi2=9.663751483143283 (change=25.58550841929129 %)
[2025-11-27 18:15:33] 2025-11-27 23:14:21,372 | INFO     | sum of square deviations: 4752704570651.942
[2025-11-27 18:15:33] 2025-11-27 23:14:21,677 | INFO     | sum of deviations: 13125015754852.4
[2025-11-27 18:15:33] 2025-11-27 23:14:21,677 | INFO     | mean x: 1764209478.0048308
[2025-11-27 18:15:33] 2025-11-27 23:14:21,677 | INFO     | mean y: 2978553.217391304
[2025-11-27 18:15:33] 2025-11-27 23:14:21,678 | INFO     | intersect: -4869042597.993583
[2025-11-27 18:15:33] 2025-11-27 23:14:21,681 | INFO     | chi2: 8.557038333666812
[2025-11-27 18:15:33] 2025-11-27 23:14:21,682 | INFO     | current chi2=8.557038333666812 (change=11.452210369926606 %)
[2025-11-27 18:15:33] 2025-11-27 23:14:21,682 | INFO     | left removable region: 20
[2025-11-27 18:15:33] 2025-11-27 23:14:21,685 | INFO     | sum of square deviations: 4633188457630.122
[2025-11-27 18:15:33] 2025-11-27 23:14:21,896 | INFO     | sum of deviations: 14301475121292.709
[2025-11-27 18:15:33] 2025-11-27 23:14:21,896 | INFO     | mean x: 1764209447.5383677
[2025-11-27 18:15:33] 2025-11-27 23:14:21,897 | INFO     | mean y: 2990089.1774259033
[2025-11-27 18:15:33] 2025-11-27 23:14:21,897 | INFO     | intersect: -5442676054.872559
[2025-11-27 18:15:33] 2025-11-27 23:14:21,900 | INFO     | chi2: 2.5584179864397867
[2025-11-27 18:15:33] 2025-11-27 23:14:21,901 | INFO     | current memory leak: 3.09 B/s (using 2463 data points, chi2=2.56)
[2025-11-27 18:15:33] 2025-11-27 23:14:21,904 | INFO     | could have reported an average CPU frequency of 2586 MHz (86 samples)
[2025-11-27 18:15:33] 2025-11-27 23:14:21,905 | INFO     | ..............................
[2025-11-27 18:15:33] 2025-11-27 23:14:21,905 | INFO     | . Timing measurements:
[2025-11-27 18:15:33] 2025-11-27 23:14:21,905 | INFO     | . get job = 0 s
[2025-11-27 18:15:33] 2025-11-27 23:14:21,905 | INFO     | . initial setup = 6 s
[2025-11-27 18:15:33] 2025-11-27 23:14:21,905 | INFO     | . payload setup = 33 s
[2025-11-27 18:15:33] 2025-11-27 23:14:21,905 | INFO     | . stage-in = 0 s
[2025-11-27 18:15:33] 2025-11-27 23:14:21,905 | INFO     | . payload execution = 152100 s
[2025-11-27 18:15:33] 2025-11-27 23:14:21,905 | INFO     | . stage-out = 9 s
[2025-11-27 18:15:33] 2025-11-27 23:14:21,905 | INFO     | . log creation = 2 s
[2025-11-27 18:15:33] 2025-11-27 23:14:21,906 | INFO     | ..............................
[2025-11-27 18:15:33] 2025-11-27 23:14:22,060 | INFO     | 
[2025-11-27 18:15:33] 2025-11-27 23:14:22,061 | INFO     | job summary report
[2025-11-27 18:15:33] 2025-11-27 23:14:22,061 | INFO     | --------------------------------------------------
[2025-11-27 18:15:33] 2025-11-27 23:14:22,061 | INFO     | PanDA job id: 6895476663
[2025-11-27 18:15:33] 2025-11-27 23:14:22,061 | INFO     | task id: 47556149
[2025-11-27 18:15:33] 2025-11-27 23:14:22,061 | INFO     | errors: (none)
[2025-11-27 18:15:33] 2025-11-27 23:14:22,061 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:15:33] 2025-11-27 23:14:22,061 | INFO     | pilot state: finished 
[2025-11-27 18:15:33] 2025-11-27 23:14:22,062 | INFO     | transexitcode: 0
[2025-11-27 18:15:33] 2025-11-27 23:14:22,062 | INFO     | exeerrorcode: 0
[2025-11-27 18:15:33] 2025-11-27 23:14:22,062 | INFO     | exeerrordiag: 
[2025-11-27 18:15:33] 2025-11-27 23:14:22,062 | INFO     | exitcode: 0
[2025-11-27 18:15:33] 2025-11-27 23:14:22,062 | INFO     | exitmsg: OK
[2025-11-27 18:15:33] 2025-11-27 23:14:22,062 | INFO     | cpuconsumptiontime: 313017 s
[2025-11-27 18:15:33] 2025-11-27 23:14:22,062 | INFO     | nevents: 1000
[2025-11-27 18:15:33] 2025-11-27 23:14:22,062 | INFO     | neventsw: 0
[2025-11-27 18:15:33] 2025-11-27 23:14:22,062 | INFO     | pid: 519529
[2025-11-27 18:15:33] 2025-11-27 23:14:22,063 | INFO     | pgrp: 519529
[2025-11-27 18:15:33] 2025-11-27 23:14:22,063 | INFO     | corecount: 8
[2025-11-27 18:15:33] 2025-11-27 23:14:22,063 | INFO     | event service: False
[2025-11-27 18:15:33] 2025-11-27 23:14:22,063 | INFO     | sizes: {0: 2283486, 1: 2284171, 3: 2284171, 4: 2284370, 6: 2284398, 7: 2284426, 18: 2284582, 29: 2284610, 31: 2284900, 40: 2284928, 152139: 2380762, 152140: 238104
[2025-11-27 18:15:33] 2025-11-27 23:14:22,063 | INFO     | --------------------------------------------------
[2025-11-27 18:15:33] 2025-11-27 23:14:22,063 | INFO     | 
[2025-11-27 18:15:33] 2025-11-27 23:14:22,063 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 18:15:33] 2025-11-27 23:14:22,091 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,091 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,092 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,092 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,092 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,092 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,092 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,092 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,092 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,092 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,093 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,093 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,093 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,093 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:15:33] 2025-11-27 23:14:22,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,094 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:15:33] 2025-11-27 23:14:22,094 | INFO     | job 6895476663 has completed (purged errors)
[2025-11-27 18:15:33] 2025-11-27 23:14:22,094 | INFO     | overall cleanup function is called
[2025-11-27 18:15:33] 2025-11-27 23:14:23,115 | INFO     | --- collectZombieJob: --- 10, [519529]
[2025-11-27 18:15:33] 2025-11-27 23:14:23,115 | INFO     | zombie collector waiting for pid 519529
[2025-11-27 18:15:33] 2025-11-27 23:14:23,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:15:33] 2025-11-27 23:14:23,115 | INFO     | collected zombie processes
[2025-11-27 18:15:33] 2025-11-27 23:14:23,115 | INFO     | will attempt to kill all subprocesses of pid=519529
[2025-11-27 18:15:33] 2025-11-27 23:14:25,533 | INFO     | process IDs to be killed: [519529] (in reverse order)
[2025-11-27 18:15:33] 2025-11-27 23:14:25,885 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:15:33] 2025-11-27 23:14:25,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:15:33] 2025-11-27 23:14:25,970 | INFO     | did not find any defunct processes belonging to 519529
[2025-11-27 18:15:33] 2025-11-27 23:14:26,064 | INFO     | did not find any defunct processes belonging to 519529
[2025-11-27 18:15:33] 2025-11-27 23:14:26,080 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:15:33] 2025-11-27 23:14:26,080 | INFO     | ready for new job
[2025-11-27 18:15:33] 2025-11-27 23:14:26,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:15:33] 2025-11-27 23:14:26,181 | INFO     | ***************************************
[2025-11-27 18:15:33] 2025-11-27 23:14:26,182 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:15:33] 2025-11-27 23:14:26,182 | INFO     | ***************************************
[2025-11-27 18:15:33] 2025-11-27 23:14:26,182 | INFO     | 
[2025-11-27 18:15:33] 2025-11-27 23:14:26,184 | INFO     | architecture information:
[2025-11-27 18:15:33] 2025-11-27 23:14:26,194 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:15:33] 2025-11-27 23:14:26,377 | INFO     | cat /etc/os-release:
[2025-11-27 18:15:33] NAME="CentOS Linux"
[2025-11-27 18:15:33] VERSION="7 (Core)"
[2025-11-27 18:15:33] ID="centos"
[2025-11-27 18:15:33] ID_LIKE="rhel fedora"
[2025-11-27 18:15:33] VERSION_ID="7"
[2025-11-27 18:15:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:15:33] ANSI_COLOR="0;31"
[2025-11-27 18:15:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:15:33] HOME_URL="https://www.centos.org/"
[2025-11-27 18:15:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:15:33] 
[2025-11-27 18:15:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:15:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:15:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:15:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:15:33] 
[2025-11-27 18:15:33] 2025-11-27 23:14:26,377 | INFO     | ***************************************
[2025-11-27 18:15:33] 2025-11-27 23:14:26,883 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 18:15:33] 2025-11-27 23:14:26,985 | INFO     | sufficient remaining disk space (48939139072 B)
[2025-11-27 18:15:33] 2025-11-27 23:14:26,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:15:33] 2025-11-27 23:14:26,986 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:15:33] 2025-11-27 23:14:26,986 | INFO     | update_server=False
[2025-11-27 18:15:33] 2025-11-27 23:14:26,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:15:33] 2025-11-27 23:14:27,050 | INFO     | all job control threads have been joined
[2025-11-27 18:15:33] 2025-11-27 23:14:27,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:15:33] 2025-11-27 23:14:27,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:15:33] 2025-11-27 23:14:27,110 | INFO     | aborting loop
[2025-11-27 18:15:33] 2025-11-27 23:14:27,544 | INFO     | all data control threads have been joined
[2025-11-27 18:15:33] 2025-11-27 23:14:27,992 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:28,038 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:15:33] 2025-11-27 23:14:28,055 | INFO     | [job] control thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:28,093 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:28,111 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:28,113 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:28,120 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:28,151 | INFO     | all payload control threads have been joined
[2025-11-27 18:15:33] 2025-11-27 23:14:28,559 | INFO     | [data] control thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:28,694 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:28,748 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:29,119 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:29,157 | INFO     | [payload] control thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:29,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:29,474 | INFO     | [job] validate thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:29,587 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:29,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:15:33] 2025-11-27 23:14:30,045 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:33,924 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:15:33] 2025-11-27 23:14:57,985 | INFO     | PID=508539 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 18:15:33] 2025-11-27 23:14:58,035 | INFO     | .. there are 7 such processes running
[2025-11-27 18:15:33] 2025-11-27 23:14:58,035 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:15:33] 2025-11-27 23:14:58,035 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:15:33] 2025-11-27 23:14:58,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:15:33] 2025-11-27 23:15:24,820 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:15:33] 2025-11-27 23:15:26,638 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140705266231104)>', '<ExcThread(monitor, started 140704906983168)>']
[2025-11-27 18:15:33] 2025-11-27 23:15:27,245 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:15:33] 2025-11-27 23:15:27,245 | INFO     | [monitor] control thread has ended
[2025-11-27 18:15:33] 2025-11-27 23:15:31,664 | INFO     | all workflow threads have been joined
[2025-11-27 18:15:33] 2025-11-27 23:15:31,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:15:33] 2025-11-27 23:15:31,665 | INFO     | traces error code: 0
[2025-11-27 18:15:33] 2025-11-27 23:15:31,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:15:33] 2025-11-27 23:15:33,063 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:15:33] 2025-11-27 23:15:33,073 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:15:33] 2025-11-27 23:15:33,078 [wrapper] pilotpid: 508539
[2025-11-27 18:15:33] 2025-11-27 23:15:33,096 [wrapper] Pilot exit status: 0
[2025-11-27 18:15:33] 2025-11-27 23:15:33,144 [wrapper] pandaids: 6895476663
[2025-11-27 18:15:33] 2025-11-27 23:15:33,241 [wrapper] cleanup supervisor_pilot  992841 508540
[2025-11-27 18:15:33] 2025-11-27 23:15:33,245 [wrapper] Test setup, not cleaning
[2025-11-27 18:15:33] 2025-11-27 23:15:33,250 [wrapper] apfmon messages muted
[2025-11-27 18:15:33] 2025-11-27 23:15:33,284 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:15:33] 2025-11-27 23:15:33,304 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:15:33]  *** Error codes and diagnostics ***
[2025-11-27 18:15:33]     "exeErrorCode": 0,
[2025-11-27 18:15:33]     "exeErrorDiag": "",
[2025-11-27 18:15:33]     "pilotErrorCode": 0,
[2025-11-27 18:15:33]     "pilotErrorDiag": "",
[2025-11-27 18:15:33]  *** Listing of results directory ***
[2025-11-27 18:15:33] total 1357720
[2025-11-27 18:15:33] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 04:01 pilot3.tar.gz
[2025-11-27 18:15:33] -rwx------. 1 boincer umatlas     36292 Nov 24 04:33 runpilot2-wrapper.sh
[2025-11-27 18:15:33] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 04:33 queuedata.json
[2025-11-27 18:15:33] -rw-r--r--. 1 boincer umatlas       100 Nov 25 23:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:15:33] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 23:55 run_atlas
[2025-11-27 18:15:33] -rw-r--r--. 1 boincer umatlas       105 Nov 25 23:55 job.xml
[2025-11-27 18:15:33] -rw-r--r--. 2 boincer umatlas 410743187 Nov 25 23:55 EVNT.47483658._001299.pool.root.1
[2025-11-27 18:15:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:55 start_atlas.sh
[2025-11-27 18:15:33] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 23:55 shared
[2025-11-27 18:15:33] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 23:55 input.tar.gz
[2025-11-27 18:15:33] -rw-r--r--. 1 boincer umatlas         0 Nov 25 23:55 boinc_lockfile
[2025-11-27 18:15:33] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 23:55 pandaJob.out
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas        57 Nov 25 23:55 setup.sh.local
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas    991877 Nov 25 23:56 agis_schedconf.cvmfs.json
[2025-11-27 18:15:33] drwx------. 5 boincer umatlas      4096 Nov 25 23:56 pilot3
[2025-11-27 18:15:33] -rw-r--r--. 1 boincer umatlas       534 Nov 27 17:43 boinc_task_state.xml
[2025-11-27 18:15:33] -rw-r--r--. 1 boincer umatlas      6662 Nov 27 18:09 init_data.xml
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas 931138405 Nov 27 18:12 HITS.47556149._002854.pool.root.1
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas      1066 Nov 27 18:13 memory_monitor_summary.json
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas   1516240 Nov 27 18:13 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas   3202028 Nov 27 18:13 log.47556149._002854.job.log.tgz.1
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas        95 Nov 27 18:14 pilot_heartbeat.json
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas      8637 Nov 27 18:14 heartbeat.json
[2025-11-27 18:15:33] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 18:15 boinc_mmap_file
[2025-11-27 18:15:33] -rw-r--r--. 1 boincer umatlas        30 Nov 27 18:15 wrapper_checkpoint.txt
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas      4822 Nov 27 18:15 pilotlog.txt
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas  19047701 Nov 27 18:15 log.47556149._002854.job.log.1
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas       353 Nov 27 18:15 output.list
[2025-11-27 18:15:33] -rw-r--r--. 1 boincer umatlas       620 Nov 27 18:15 runtime_log
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas  22272000 Nov 27 18:15 result.tar.gz
[2025-11-27 18:15:33] -rw-r--r--. 1 boincer umatlas      9344 Nov 27 18:15 runtime_log.err
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas       665 Nov 27 18:15 DUkLDmH8hh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzaLKDmuSkGun.diag
[2025-11-27 18:15:33] -rw-r--r--. 1 boincer umatlas     21366 Nov 27 18:15 stderr.txt
[2025-11-27 18:15:33] HITS file was successfully produced:
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas 931138405 Nov 27 18:12 shared/HITS.pool.root.1
[2025-11-27 18:15:33]  *** Contents of shared directory: ***
[2025-11-27 18:15:33] total 1332788
[2025-11-27 18:15:33] -rw-r--r--. 2 boincer umatlas 410743187 Nov 25 23:55 ATLAS.root_0
[2025-11-27 18:15:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:55 start_atlas.sh
[2025-11-27 18:15:33] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 23:55 input.tar.gz
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas 931138405 Nov 27 18:12 HITS.pool.root.1
[2025-11-27 18:15:33] -rw-------. 1 boincer umatlas  22272000 Nov 27 18:15 result.tar.gz
18:15:34 (504392): run_atlas exited; CPU time 315702.102406
18:15:34 (504392): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN