Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:46:17 (1968927): wrapper (7.7.26015): starting
13:46:17 (1968927): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 13:46:17] Arguments: --nthreads 8
[2025-11-25 13:46:17] Threads: 8
[2025-11-25 13:46:17] Checking for CVMFS
[2025-11-25 13:46:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 13:46:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 13:46:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 13:46:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 13:46:18] 2.10.1.0 4440 250809 169492 153293 3 81 9480440 18432000 3769 130560 2 278494789 99.988 10150453 6491 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-25 13:46:18] CVMFS is ok
[2025-11-25 13:46:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:46:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:46:18] Further information can be found at the LHC@home message board.
[2025-11-25 13:46:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:46:18] Checking for apptainer binary...
[2025-11-25 13:46:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 13:46:18] Running /usr/bin/apptainer --version
[2025-11-25 13:46:18] apptainer version 1.1.9-1.el8
[2025-11-25 13:46:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:46:19] c-16-31.aglt2.org
[2025-11-25 13:46:19] apptainer works
[2025-11-25 13:46:19] Set ATHENA_PROC_NUMBER=8
[2025-11-25 13:46:19] Set ATHENA_CORE_NUMBER=8
[2025-11-25 13:46:19] Starting ATLAS job with PandaID=6895401843
[2025-11-25 13:46:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:52:48]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:52:48] 2025-11-26 12:52:09,625 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-26 07:52:48] 2025-11-26 12:52:09,625 | INFO     | log transfer has been attempted: DONE
[2025-11-26 07:52:48] 2025-11-26 12:52:09,625 | INFO     | job 6895401843 has finished - writing final server update
[2025-11-26 07:52:48] 2025-11-26 12:52:09,625 | INFO     | total number of processed events: 1000 (read)
[2025-11-26 07:52:48] 2025-11-26 12:52:09,627 | INFO     | executing command: lscpu
[2025-11-26 07:52:48] 2025-11-26 12:52:09,689 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 07:52:48] 2025-11-26 12:52:09,834 | INFO     | monitor loop #4650: job 0:6895401843 is in state 'finished'
[2025-11-26 07:52:48] 2025-11-26 12:52:09,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:52:48] 2025-11-26 12:52:10,131 | INFO     | time since job start (65139s) is within the limit (172800.0s)
[2025-11-26 07:52:48] 2025-11-26 12:52:12,136 | INFO     | time since job start (65141s) is within the limit (172800.0s)
[2025-11-26 07:52:48] 2025-11-26 12:52:12,337 | INFO     | monitor loop #4651: job 0:6895401843 is in state 'finished'
[2025-11-26 07:52:48] 2025-11-26 12:52:12,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:52:48] 2025-11-26 12:52:14,144 | INFO     | time since job start (65143s) is within the limit (172800.0s)
[2025-11-26 07:52:48] 2025-11-26 12:52:14,771 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 07:52:48] 2025-11-26 12:52:14,778 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2949.8571749999996
[2025-11-26 07:52:48] 2025-11-26 12:52:14,784 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895401843/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:52:48] 2025-11-26 12:52:14,785 | INFO     | extracted standard info from prmon json
[2025-11-26 07:52:48] 2025-11-26 12:52:14,785 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:52:48] 2025-11-26 12:52:14,785 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:52:48] 2025-11-26 12:52:14,800 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:52:48] 2025-11-26 12:52:14,802 | INFO     | sum of square deviations: 377740924635.4159
[2025-11-26 07:52:48] 2025-11-26 12:52:14,824 | INFO     | sum of deviations: 20915309202421.293
[2025-11-26 07:52:48] 2025-11-26 12:52:14,824 | INFO     | mean x: 1764128961.5842698
[2025-11-26 07:52:48] 2025-11-26 12:52:14,824 | INFO     | mean y: 3622387.36329588
[2025-11-26 07:52:48] 2025-11-26 12:52:14,824 | INFO     | intersect: -97675237111.6268
[2025-11-26 07:52:48] 2025-11-26 12:52:14,826 | INFO     | chi2: 49.42438801351859
[2025-11-26 07:52:48] 2025-11-26 12:52:14,827 | INFO     | sum of square deviations: 372460425170.3804
[2025-11-26 07:52:48] 2025-11-26 12:52:14,845 | INFO     | monitor loop #4652: job 0:6895401843 is in state 'finished'
[2025-11-26 07:52:48] 2025-11-26 12:52:14,849 | INFO     | sum of deviations: 21339092094084.758
[2025-11-26 07:52:48] 2025-11-26 12:52:14,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:52:48] 2025-11-26 12:52:14,849 | INFO     | mean x: 1764128809.084666
[2025-11-26 07:52:48] 2025-11-26 12:52:14,849 | INFO     | mean y: 3634619.169332079
[2025-11-26 07:52:48] 2025-11-26 12:52:14,849 | INFO     | intersect: -101067256618.91393
[2025-11-26 07:52:48] 2025-11-26 12:52:14,850 | INFO     | chi2: 47.858170520358215
[2025-11-26 07:52:48] 2025-11-26 12:52:14,850 | INFO     | current chi2=47.858170520358215 (change=3.1689163105711704 %)
[2025-11-26 07:52:48] 2025-11-26 12:52:14,850 | INFO     | right removable region: 1062
[2025-11-26 07:52:48] 2025-11-26 12:52:14,851 | INFO     | sum of square deviations: 372460370270.3801
[2025-11-26 07:52:48] 2025-11-26 12:52:14,873 | INFO     | sum of deviations: 20514625098946.79
[2025-11-26 07:52:48] 2025-11-26 12:52:14,873 | INFO     | mean x: 1764129114.084666
[2025-11-26 07:52:48] 2025-11-26 12:52:14,873 | INFO     | mean y: 3633949.73565381
[2025-11-26 07:52:48] 2025-11-26 12:52:14,873 | INFO     | intersect: -97162266882.3779
[2025-11-26 07:52:48] 2025-11-26 12:52:14,875 | INFO     | chi2: 47.27590751389358
[2025-11-26 07:52:48] 2025-11-26 12:52:14,875 | INFO     | current chi2=47.27590751389358 (change=4.347004760154754 %)
[2025-11-26 07:52:48] 2025-11-26 12:52:14,875 | INFO     | left removable region: 10
[2025-11-26 07:52:48] 2025-11-26 12:52:14,876 | INFO     | sum of square deviations: 361016927711.29974
[2025-11-26 07:52:48] 2025-11-26 12:52:14,897 | INFO     | sum of deviations: 20795209480348.65
[2025-11-26 07:52:48] 2025-11-26 12:52:14,898 | INFO     | mean x: 1764129083.5855513
[2025-11-26 07:52:48] 2025-11-26 12:52:14,898 | INFO     | mean y: 3653123.7927756654
[2025-11-26 07:52:48] 2025-11-26 12:52:14,898 | INFO     | intersect: -101613282337.12242
[2025-11-26 07:52:48] 2025-11-26 12:52:14,899 | INFO     | chi2: 45.60696642780557
[2025-11-26 07:52:48] 2025-11-26 12:52:14,900 | INFO     | current memory leak: 57.60 B/s (using 1052 data points, chi2=45.61)
[2025-11-26 07:52:48] 2025-11-26 12:52:14,900 | INFO     | could have reported an average CPU frequency of 2905 MHz (39 samples)
[2025-11-26 07:52:48] 2025-11-26 12:52:14,900 | INFO     | ..............................
[2025-11-26 07:52:48] 2025-11-26 12:52:14,901 | INFO     | . Timing measurements:
[2025-11-26 07:52:48] 2025-11-26 12:52:14,901 | INFO     | . get job = 0 s
[2025-11-26 07:52:48] 2025-11-26 12:52:14,901 | INFO     | . initial setup = 2 s
[2025-11-26 07:52:48] 2025-11-26 12:52:14,901 | INFO     | . payload setup = 6 s
[2025-11-26 07:52:48] 2025-11-26 12:52:14,901 | INFO     | . stage-in = 0 s
[2025-11-26 07:52:48] 2025-11-26 12:52:14,901 | INFO     | . payload execution = 65102 s
[2025-11-26 07:52:48] 2025-11-26 12:52:14,901 | INFO     | . stage-out = 3 s
[2025-11-26 07:52:48] 2025-11-26 12:52:14,901 | INFO     | . log creation = 0 s
[2025-11-26 07:52:48] 2025-11-26 12:52:14,901 | INFO     | ..............................
[2025-11-26 07:52:48] 2025-11-26 12:52:15,201 | INFO     | 
[2025-11-26 07:52:48] 2025-11-26 12:52:15,201 | INFO     | job summary report
[2025-11-26 07:52:48] 2025-11-26 12:52:15,201 | INFO     | --------------------------------------------------
[2025-11-26 07:52:48] 2025-11-26 12:52:15,201 | INFO     | PanDA job id: 6895401843
[2025-11-26 07:52:48] 2025-11-26 12:52:15,202 | INFO     | task id: 47556149
[2025-11-26 07:52:48] 2025-11-26 12:52:15,202 | INFO     | errors: (none)
[2025-11-26 07:52:48] 2025-11-26 12:52:15,202 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:52:48] 2025-11-26 12:52:15,202 | INFO     | pilot state: finished 
[2025-11-26 07:52:48] 2025-11-26 12:52:15,202 | INFO     | transexitcode: 0
[2025-11-26 07:52:48] 2025-11-26 12:52:15,203 | INFO     | exeerrorcode: 0
[2025-11-26 07:52:48] 2025-11-26 12:52:15,203 | INFO     | exeerrordiag: 
[2025-11-26 07:52:48] 2025-11-26 12:52:15,203 | INFO     | exitcode: 0
[2025-11-26 07:52:48] 2025-11-26 12:52:15,203 | INFO     | exitmsg: OK
[2025-11-26 07:52:48] 2025-11-26 12:52:15,203 | INFO     | cpuconsumptiontime: 487279 s
[2025-11-26 07:52:48] 2025-11-26 12:52:15,203 | INFO     | nevents: 1000
[2025-11-26 07:52:48] 2025-11-26 12:52:15,203 | INFO     | neventsw: 0
[2025-11-26 07:52:48] 2025-11-26 12:52:15,204 | INFO     | pid: 1991332
[2025-11-26 07:52:48] 2025-11-26 12:52:15,204 | INFO     | pgrp: 1991332
[2025-11-26 07:52:48] 2025-11-26 12:52:15,204 | INFO     | corecount: 8
[2025-11-26 07:52:48] 2025-11-26 12:52:15,204 | INFO     | event service: False
[2025-11-26 07:52:48] 2025-11-26 12:52:15,204 | INFO     | sizes: {0: 2284093, 1: 2284292, 5: 2284554, 12: 2284610, 65113: 2339548, 65117: 2348542, 65120: 2348726, 65128: 2348972}
[2025-11-26 07:52:48] 2025-11-26 12:52:15,204 | INFO     | --------------------------------------------------
[2025-11-26 07:52:48] 2025-11-26 12:52:15,205 | INFO     | 
[2025-11-26 07:52:48] 2025-11-26 12:52:15,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 07:52:48] 2025-11-26 12:52:15,225 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,225 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,225 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,226 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,226 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,226 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,226 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,226 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,226 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,228 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,228 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,228 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:52:48] 2025-11-26 12:52:15,228 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,228 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:52:48] 2025-11-26 12:52:15,229 | INFO     | job 6895401843 has completed (purged errors)
[2025-11-26 07:52:48] 2025-11-26 12:52:15,229 | INFO     | overall cleanup function is called
[2025-11-26 07:52:48] 2025-11-26 12:52:16,247 | INFO     | --- collectZombieJob: --- 10, [1991332]
[2025-11-26 07:52:48] 2025-11-26 12:52:16,247 | INFO     | zombie collector waiting for pid 1991332
[2025-11-26 07:52:48] 2025-11-26 12:52:16,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:52:48] 2025-11-26 12:52:16,247 | INFO     | collected zombie processes
[2025-11-26 07:52:48] 2025-11-26 12:52:16,248 | INFO     | will attempt to kill all subprocesses of pid=1991332
[2025-11-26 07:52:48] 2025-11-26 12:52:16,560 | INFO     | process IDs to be killed: [1991332] (in reverse order)
[2025-11-26 07:52:48] 2025-11-26 12:52:16,651 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:52:48] 2025-11-26 12:52:16,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:52:48] 2025-11-26 12:52:16,668 | INFO     | did not find any defunct processes belonging to 1991332
[2025-11-26 07:52:48] 2025-11-26 12:52:16,679 | INFO     | did not find any defunct processes belonging to 1991332
[2025-11-26 07:52:48] 2025-11-26 12:52:16,680 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:52:48] 2025-11-26 12:52:16,681 | INFO     | ready for new job
[2025-11-26 07:52:48] 2025-11-26 12:52:16,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:52:48] 2025-11-26 12:52:16,686 | INFO     | ***************************************
[2025-11-26 07:52:48] 2025-11-26 12:52:16,687 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:52:48] 2025-11-26 12:52:16,687 | INFO     | ***************************************
[2025-11-26 07:52:48] 2025-11-26 12:52:16,687 | INFO     | 
[2025-11-26 07:52:48] 2025-11-26 12:52:16,702 | INFO     | architecture information:
[2025-11-26 07:52:48] 2025-11-26 12:52:16,702 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:52:48] 2025-11-26 12:52:16,715 | INFO     | cat /etc/os-release:
[2025-11-26 07:52:48] NAME="CentOS Linux"
[2025-11-26 07:52:48] VERSION="7 (Core)"
[2025-11-26 07:52:48] ID="centos"
[2025-11-26 07:52:48] ID_LIKE="rhel fedora"
[2025-11-26 07:52:48] VERSION_ID="7"
[2025-11-26 07:52:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:52:48] ANSI_COLOR="0;31"
[2025-11-26 07:52:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:52:48] HOME_URL="https://www.centos.org/"
[2025-11-26 07:52:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:52:48] 
[2025-11-26 07:52:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:52:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:52:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:52:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:52:48] 
[2025-11-26 07:52:48] 2025-11-26 12:52:16,715 | INFO     | ***************************************
[2025-11-26 07:52:48] 2025-11-26 12:52:17,218 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 07:52:48] 2025-11-26 12:52:17,230 | INFO     | sufficient remaining disk space (99498328064 B)
[2025-11-26 07:52:48] 2025-11-26 12:52:17,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:52:48] 2025-11-26 12:52:17,231 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:52:48] 2025-11-26 12:52:17,231 | INFO     | update_server=False
[2025-11-26 07:52:48] 2025-11-26 12:52:17,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:52:48] 2025-11-26 12:52:17,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:52:48] 2025-11-26 12:52:17,352 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 07:52:48] 2025-11-26 12:52:17,352 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 07:52:48] 2025-11-26 12:52:17,352 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:52:48] 2025-11-26 12:52:17,353 | INFO     | will abort loop
[2025-11-26 07:52:48] 2025-11-26 12:52:17,761 | INFO     | all data control threads have been joined
[2025-11-26 07:52:48] 2025-11-26 12:52:17,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:52:48] 2025-11-26 12:52:18,162 | INFO     | all job control threads have been joined
[2025-11-26 07:52:48] 2025-11-26 12:52:18,221 | INFO     | all payload control threads have been joined
[2025-11-26 07:52:48] 2025-11-26 12:52:18,237 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:18,358 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:18,645 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:18,766 | INFO     | [data] control thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:18,832 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:18,904 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:18,917 | INFO     | [job] validate thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:19,048 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:19,073 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:19,106 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:19,167 | INFO     | [job] control thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:19,226 | INFO     | [payload] control thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:19,237 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:19,397 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:19,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:52:48] 2025-11-26 12:52:20,997 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:21,157 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:52:48] 2025-11-26 12:52:21,921 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:52:48] 2025-11-26 12:52:22,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139999004231488)>', '<ExcThread(monitor, started 139998342932224)>']
[2025-11-26 07:52:48] 2025-11-26 12:52:27,467 | INFO     | all workflow threads have been joined
[2025-11-26 07:52:48] 2025-11-26 12:52:27,468 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:52:48] 2025-11-26 12:52:27,468 | INFO     | traces error code: 0
[2025-11-26 07:52:48] 2025-11-26 12:52:27,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:52:48] 2025-11-26 12:52:47,584 | INFO     | PID=1975772 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 07:52:48] 2025-11-26 12:52:47,585 | INFO     | .. there are 5 such processes running
[2025-11-26 07:52:48] 2025-11-26 12:52:47,585 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:52:48] 2025-11-26 12:52:47,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:52:48] 2025-11-26 12:52:47,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:52:48] 2025-11-26 12:52:47,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:52:48] 2025-11-26 12:52:47,586 | INFO     | [monitor] control thread has ended
[2025-11-26 07:52:48] 2025-11-26 12:52:47,691 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:52:48] 2025-11-26 12:52:47,694 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:52:48] 2025-11-26 12:52:47,697 [wrapper] pilotpid: 1975772
[2025-11-26 07:52:48] 2025-11-26 12:52:47,699 [wrapper] Pilot exit status: 0
[2025-11-26 07:52:48] 2025-11-26 12:52:47,708 [wrapper] pandaids: 6895401843
[2025-11-26 07:52:48] 2025-11-26 12:52:47,766 [wrapper] cleanup supervisor_pilot 2563684 1975773
[2025-11-26 07:52:48] 2025-11-26 12:52:47,769 [wrapper] Test setup, not cleaning
[2025-11-26 07:52:48] 2025-11-26 12:52:47,771 [wrapper] apfmon messages muted
[2025-11-26 07:52:48] 2025-11-26 12:52:47,773 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:52:48] 2025-11-26 12:52:47,775 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:52:48]  *** Error codes and diagnostics ***
[2025-11-26 07:52:48]     "exeErrorCode": 0,
[2025-11-26 07:52:48]     "exeErrorDiag": "",
[2025-11-26 07:52:48]     "pilotErrorCode": 0,
[2025-11-26 07:52:48]     "pilotErrorDiag": "",
[2025-11-26 07:52:48]  *** Listing of results directory ***
[2025-11-26 07:52:48] total 1326256
[2025-11-26 07:52:48] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 02:32 pilot3.tar.gz
[2025-11-26 07:52:48] -rwx------ 1 boincer umatlas     36292 Nov 24 02:49 runpilot2-wrapper.sh
[2025-11-26 07:52:48] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 02:49 queuedata.json
[2025-11-26 07:52:48] -rw-r--r-- 1 boincer umatlas       100 Nov 25 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:52:48] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 13:46 run_atlas
[2025-11-26 07:52:48] -rw-r--r-- 1 boincer umatlas       105 Nov 25 13:46 job.xml
[2025-11-26 07:52:48] -rw-r--r-- 2 boincer umatlas 412228251 Nov 25 13:46 EVNT.47483658._001264.pool.root.1
[2025-11-26 07:52:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 13:46 start_atlas.sh
[2025-11-26 07:52:48] drwxrwx--x 2 boincer umatlas      4096 Nov 25 13:46 shared
[2025-11-26 07:52:48] -rw-r--r-- 2 boincer umatlas    590098 Nov 25 13:46 input.tar.gz
[2025-11-26 07:52:48] -rw-r--r-- 1 boincer umatlas         0 Nov 25 13:46 boinc_lockfile
[2025-11-26 07:52:48] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 13:46 pandaJob.out
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas        57 Nov 25 13:46 setup.sh.local
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas    991543 Nov 25 13:46 agis_schedconf.cvmfs.json
[2025-11-26 07:52:48] drwx------ 5 boincer umatlas      4096 Nov 25 13:46 pilot3
[2025-11-26 07:52:48] -rw-r--r-- 1 boincer umatlas       533 Nov 26 07:37 boinc_task_state.xml
[2025-11-26 07:52:48] -rw-r--r-- 1 boincer umatlas      6014 Nov 26 07:47 init_data.xml
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas 919368289 Nov 26 07:51 HITS.47556149._002504.pool.root.1
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas      1065 Nov 26 07:51 memory_monitor_summary.json
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas   1516240 Nov 26 07:52 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas   2257121 Nov 26 07:52 log.47556149._002504.job.log.tgz.1
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas        95 Nov 26 07:52 pilot_heartbeat.json
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas      8647 Nov 26 07:52 heartbeat.json
[2025-11-26 07:52:48] -rw-r--r-- 1 boincer umatlas        29 Nov 26 07:52 wrapper_checkpoint.txt
[2025-11-26 07:52:48] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 07:52 boinc_mmap_file
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas       822 Nov 26 07:52 pilotlog.txt
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas   9026257 Nov 26 07:52 log.47556149._002504.job.log.1
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas       353 Nov 26 07:52 output.list
[2025-11-26 07:52:48] -rw-r--r-- 1 boincer umatlas       620 Nov 26 07:52 runtime_log
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas  11304960 Nov 26 07:52 result.tar.gz
[2025-11-26 07:52:48] -rw-r--r-- 1 boincer umatlas      9338 Nov 26 07:52 runtime_log.err
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas       666 Nov 26 07:52 OUfLDmmVgh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlxIKDmvNT2ln.diag
[2025-11-26 07:52:48] -rw-r--r-- 1 boincer umatlas     21753 Nov 26 07:52 stderr.txt
[2025-11-26 07:52:48] HITS file was successfully produced:
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas 919368289 Nov 26 07:51 shared/HITS.pool.root.1
[2025-11-26 07:52:48]  *** Contents of shared directory: ***
[2025-11-26 07:52:48] total 1312036
[2025-11-26 07:52:48] -rw-r--r-- 2 boincer umatlas 412228251 Nov 25 13:46 ATLAS.root_0
[2025-11-26 07:52:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 13:46 start_atlas.sh
[2025-11-26 07:52:48] -rw-r--r-- 2 boincer umatlas    590098 Nov 25 13:46 input.tar.gz
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas 919368289 Nov 26 07:51 HITS.pool.root.1
[2025-11-26 07:52:48] -rw------- 1 boincer umatlas  11304960 Nov 26 07:52 result.tar.gz
07:52:50 (1968927): run_atlas exited; CPU time 486667.284040
07:52:50 (1968927): called boinc_finish(0)

</stderr_txt>
]]>

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