Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:41:15 (15863): wrapper (7.7.26015): starting
13:41:15 (15863): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 13:41:15] Arguments: --nthreads 12
[2025-11-25 13:41:15] Threads: 12
[2025-11-25 13:41:15] Checking for CVMFS
[2025-11-25 13:41:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 13:41:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 13:41:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 13:41:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 13:41:15] 2.11.2.0 2933 286615 92720 153293 0 81 17893001 20275200 1 130560 2 128388639 99.962 17168003 14699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 13:41:15] CVMFS is ok
[2025-11-25 13:41:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:41:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:41:15] Further information can be found at the LHC@home message board.
[2025-11-25 13:41:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:41:15] Checking for apptainer binary...
[2025-11-25 13:41:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 13:41:15] Running /usr/bin/apptainer --version
[2025-11-25 13:41:15] apptainer version 1.3.2-1.el7
[2025-11-25 13:41:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:41:17] c-205-15.aglt2.org
[2025-11-25 13:41:17] apptainer works
[2025-11-25 13:41:17] Set ATHENA_PROC_NUMBER=12
[2025-11-25 13:41:17] Set ATHENA_CORE_NUMBER=12
[2025-11-25 13:41:17] Starting ATLAS job with PandaID=6891107098
[2025-11-25 13:41:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:48:37]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:48:37] 2025-11-26 01:48:02,176 | INFO     | time since job start (25590s) is within the limit (172800.0s)
[2025-11-25 20:48:37] 2025-11-26 01:48:03,529 | INFO     | monitor loop #1910: job 0:6891107098 is in state 'finished'
[2025-11-25 20:48:37] 2025-11-26 01:48:03,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 20:48:37] 2025-11-26 01:48:04,182 | INFO     | time since job start (25592s) is within the limit (172800.0s)
[2025-11-25 20:48:37] 2025-11-26 01:48:05,095 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 20:48:37] 2025-11-26 01:48:05,099 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-11-25 20:48:37] 2025-11-26 01:48:05,102 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891107098/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 20:48:37] 2025-11-26 01:48:05,103 | INFO     | extracted standard info from prmon json
[2025-11-25 20:48:37] 2025-11-26 01:48:05,103 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 20:48:37] 2025-11-26 01:48:05,103 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 20:48:37] 2025-11-26 01:48:05,110 | INFO     | fitting pss+swap vs Time
[2025-11-25 20:48:37] 2025-11-26 01:48:05,111 | INFO     | sum of square deviations: 22809661635.680187
[2025-11-25 20:48:37] 2025-11-26 01:48:05,115 | INFO     | sum of deviations: 419402711811.13586
[2025-11-25 20:48:37] 2025-11-26 01:48:05,115 | INFO     | mean x: 1764108870.2458234
[2025-11-25 20:48:37] 2025-11-26 01:48:05,115 | INFO     | mean y: 3424820.6491646776
[2025-11-25 20:48:37] 2025-11-26 01:48:05,115 | INFO     | intersect: -32433358150.029675
[2025-11-25 20:48:37] 2025-11-26 01:48:05,116 | INFO     | chi2: 5.396029886770636
[2025-11-25 20:48:37] 2025-11-26 01:48:05,116 | INFO     | sum of square deviations: 22002822107.87431
[2025-11-25 20:48:37] 2025-11-26 01:48:05,120 | INFO     | sum of deviations: 561138400735.5167
[2025-11-25 20:48:37] 2025-11-26 01:48:05,120 | INFO     | mean x: 1764108717.7487922
[2025-11-25 20:48:37] 2025-11-26 01:48:05,120 | INFO     | mean y: 3451570.033816425
[2025-11-25 20:48:37] 2025-11-26 01:48:05,120 | INFO     | intersect: -44986647415.8083
[2025-11-25 20:48:37] 2025-11-26 01:48:05,121 | INFO     | chi2: 2.9010008765972413
[2025-11-25 20:48:37] 2025-11-26 01:48:05,121 | INFO     | current chi2=2.9010008765972413 (change=46.23823556445488 %)
[2025-11-25 20:48:37] 2025-11-26 01:48:05,121 | INFO     | sum of square deviations: 21215213622.562355
[2025-11-25 20:48:37] 2025-11-26 01:48:05,125 | INFO     | sum of deviations: 587201363591.7952
[2025-11-25 20:48:37] 2025-11-26 01:48:05,125 | INFO     | mean x: 1764108565.2493887
[2025-11-25 20:48:37] 2025-11-26 01:48:05,125 | INFO     | mean y: 3456567.1784841074
[2025-11-25 20:48:37] 2025-11-26 01:48:05,125 | INFO     | intersect: -48824095842.510284
[2025-11-25 20:48:37] 2025-11-26 01:48:05,126 | INFO     | chi2: 2.589311653358077
[2025-11-25 20:48:37] 2025-11-26 01:48:05,126 | INFO     | current chi2=2.589311653358077 (change=10.744196106716226 %)
[2025-11-25 20:48:37] 2025-11-26 01:48:05,126 | INFO     | right removable region: 408
[2025-11-25 20:48:37] 2025-11-26 01:48:05,126 | INFO     | sum of square deviations: 22002759277.874325
[2025-11-25 20:48:37] 2025-11-26 01:48:05,130 | INFO     | sum of deviations: 275530468243.20245
[2025-11-25 20:48:37] 2025-11-26 01:48:05,130 | INFO     | mean x: 1764109022.7487922
[2025-11-25 20:48:37] 2025-11-26 01:48:05,130 | INFO     | mean y: 3451936.9057971016
[2025-11-25 20:48:37] 2025-11-26 01:48:05,130 | INFO     | intersect: -22087676677.077366
[2025-11-25 20:48:37] 2025-11-26 01:48:05,131 | INFO     | chi2: 2.9511507680248963
[2025-11-25 20:48:37] 2025-11-26 01:48:05,131 | INFO     | current chi2=2.9511507680248963 (change=45.30885058179185 %)
[2025-11-25 20:48:37] 2025-11-26 01:48:05,132 | INFO     | sum of square deviations: 21215138104.56235
[2025-11-25 20:48:37] 2025-11-26 01:48:05,135 | INFO     | sum of deviations: 243361602382.4178
[2025-11-25 20:48:37] 2025-11-26 01:48:05,135 | INFO     | mean x: 1764109175.2493887
[2025-11-25 20:48:37] 2025-11-26 01:48:05,136 | INFO     | mean y: 3458157.672371638
[2025-11-25 20:48:37] 2025-11-26 01:48:05,136 | INFO     | intersect: -20232867128.086266
[2025-11-25 20:48:37] 2025-11-26 01:48:05,136 | INFO     | chi2: 2.9016276374197587
[2025-11-25 20:48:37] 2025-11-26 01:48:05,136 | INFO     | current chi2=2.9016276374197587 (change=1.6780955802634816 %)
[2025-11-25 20:48:37] 2025-11-26 01:48:05,136 | INFO     | left removable region: 20
[2025-11-25 20:48:37] 2025-11-26 01:48:05,137 | INFO     | sum of square deviations: 18112264642.75
[2025-11-25 20:48:37] 2025-11-26 01:48:05,140 | INFO     | sum of deviations: 370531864292.7501
[2025-11-25 20:48:37] 2025-11-26 01:48:05,140 | INFO     | mean x: 1764109144.75
[2025-11-25 20:48:37] 2025-11-26 01:48:05,140 | INFO     | mean y: 3499262.533505155
[2025-11-25 20:48:37] 2025-11-26 01:48:05,141 | INFO     | intersect: -36085784055.31785
[2025-11-25 20:48:37] 2025-11-26 01:48:05,141 | INFO     | chi2: 0.05403368043649684
[2025-11-25 20:48:37] 2025-11-26 01:48:05,141 | INFO     | current memory leak: 20.46 B/s (using 388 data points, chi2=0.05)
[2025-11-25 20:48:37] 2025-11-26 01:48:05,141 | INFO     | could have reported an average CPU frequency of 2371 MHz (18 samples)
[2025-11-25 20:48:37] 2025-11-26 01:48:05,142 | INFO     | ..............................
[2025-11-25 20:48:37] 2025-11-26 01:48:05,142 | INFO     | . Timing measurements:
[2025-11-25 20:48:37] 2025-11-26 01:48:05,142 | INFO     | . get job = 0 s
[2025-11-25 20:48:37] 2025-11-26 01:48:05,142 | INFO     | . initial setup = 2 s
[2025-11-25 20:48:37] 2025-11-26 01:48:05,142 | INFO     | . payload setup = 7 s
[2025-11-25 20:48:37] 2025-11-26 01:48:05,142 | INFO     | . stage-in = 0 s
[2025-11-25 20:48:37] 2025-11-26 01:48:05,142 | INFO     | . payload execution = 25557 s
[2025-11-25 20:48:37] 2025-11-26 01:48:05,142 | INFO     | . stage-out = 3 s
[2025-11-25 20:48:37] 2025-11-26 01:48:05,142 | INFO     | . log creation = 0 s
[2025-11-25 20:48:37] 2025-11-26 01:48:05,143 | INFO     | ..............................
[2025-11-25 20:48:37] 2025-11-26 01:48:05,223 | INFO     | 
[2025-11-25 20:48:37] 2025-11-26 01:48:05,224 | INFO     | job summary report
[2025-11-25 20:48:37] 2025-11-26 01:48:05,224 | INFO     | --------------------------------------------------
[2025-11-25 20:48:37] 2025-11-26 01:48:05,224 | INFO     | PanDA job id: 6891107098
[2025-11-25 20:48:37] 2025-11-26 01:48:05,224 | INFO     | task id: 47483661
[2025-11-25 20:48:37] 2025-11-26 01:48:05,224 | INFO     | errors: (none)
[2025-11-25 20:48:37] 2025-11-26 01:48:05,225 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:48:37] 2025-11-26 01:48:05,225 | INFO     | pilot state: finished 
[2025-11-25 20:48:37] 2025-11-26 01:48:05,225 | INFO     | transexitcode: 0
[2025-11-25 20:48:37] 2025-11-26 01:48:05,225 | INFO     | exeerrorcode: 0
[2025-11-25 20:48:37] 2025-11-26 01:48:05,225 | INFO     | exeerrordiag: 
[2025-11-25 20:48:37] 2025-11-26 01:48:05,225 | INFO     | exitcode: 0
[2025-11-25 20:48:37] 2025-11-26 01:48:05,225 | INFO     | exitmsg: OK
[2025-11-25 20:48:37] 2025-11-26 01:48:05,226 | INFO     | cpuconsumptiontime: 294196 s
[2025-11-25 20:48:37] 2025-11-26 01:48:05,226 | INFO     | nevents: 1000
[2025-11-25 20:48:37] 2025-11-26 01:48:05,226 | INFO     | neventsw: 0
[2025-11-25 20:48:37] 2025-11-26 01:48:05,226 | INFO     | pid: 25942
[2025-11-25 20:48:37] 2025-11-26 01:48:05,226 | INFO     | pgrp: 25942
[2025-11-25 20:48:37] 2025-11-26 01:48:05,227 | INFO     | corecount: 12
[2025-11-25 20:48:37] 2025-11-26 01:48:05,227 | INFO     | event service: False
[2025-11-25 20:48:37] 2025-11-26 01:48:05,227 | INFO     | sizes: {0: 2284077, 1: 2284332, 6: 2284594, 12: 2284622, 25568: 2321737, 25569: 2321736, 25572: 2330914, 25573: 2330970, 25577: 2331216}
[2025-11-25 20:48:37] 2025-11-26 01:48:05,227 | INFO     | --------------------------------------------------
[2025-11-25 20:48:37] 2025-11-26 01:48:05,227 | INFO     | 
[2025-11-25 20:48:37] 2025-11-26 01:48:05,227 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 20:48:37] 2025-11-26 01:48:05,250 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,251 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,251 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,251 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,251 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,254 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:48:37] 2025-11-26 01:48:05,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,254 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:48:37] 2025-11-26 01:48:05,254 | INFO     | job 6891107098 has completed (purged errors)
[2025-11-25 20:48:37] 2025-11-26 01:48:05,254 | INFO     | overall cleanup function is called
[2025-11-25 20:48:37] 2025-11-26 01:48:06,271 | INFO     | --- collectZombieJob: --- 10, [25942]
[2025-11-25 20:48:37] 2025-11-26 01:48:06,277 | INFO     | zombie collector waiting for pid 25942
[2025-11-25 20:48:37] 2025-11-26 01:48:06,277 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:48:37] 2025-11-26 01:48:06,277 | INFO     | collected zombie processes
[2025-11-25 20:48:37] 2025-11-26 01:48:06,277 | INFO     | will attempt to kill all subprocesses of pid=25942
[2025-11-25 20:48:37] 2025-11-26 01:48:06,367 | INFO     | process IDs to be killed: [25942] (in reverse order)
[2025-11-25 20:48:37] 2025-11-26 01:48:06,419 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:48:37] 2025-11-26 01:48:06,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:48:37] 2025-11-26 01:48:06,421 | INFO     | did not find any defunct processes belonging to 25942
[2025-11-25 20:48:37] 2025-11-26 01:48:06,423 | INFO     | did not find any defunct processes belonging to 25942
[2025-11-25 20:48:37] 2025-11-26 01:48:06,425 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:48:37] 2025-11-26 01:48:06,425 | INFO     | ready for new job
[2025-11-25 20:48:37] 2025-11-26 01:48:06,426 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:48:37] 2025-11-26 01:48:06,428 | INFO     | ***************************************
[2025-11-25 20:48:37] 2025-11-26 01:48:06,428 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:48:37] 2025-11-26 01:48:06,428 | INFO     | ***************************************
[2025-11-25 20:48:37] 2025-11-26 01:48:06,428 | INFO     | 
[2025-11-25 20:48:37] 2025-11-26 01:48:06,429 | INFO     | architecture information:
[2025-11-25 20:48:37] 2025-11-26 01:48:06,429 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:48:37] 2025-11-26 01:48:06,443 | INFO     | cat /etc/os-release:
[2025-11-25 20:48:37] NAME="CentOS Linux"
[2025-11-25 20:48:37] VERSION="7 (Core)"
[2025-11-25 20:48:37] ID="centos"
[2025-11-25 20:48:37] ID_LIKE="rhel fedora"
[2025-11-25 20:48:37] VERSION_ID="7"
[2025-11-25 20:48:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:48:37] ANSI_COLOR="0;31"
[2025-11-25 20:48:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:48:37] HOME_URL="https://www.centos.org/"
[2025-11-25 20:48:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:48:37] 
[2025-11-25 20:48:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:48:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:48:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:48:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:48:37] 
[2025-11-25 20:48:37] 2025-11-26 01:48:06,444 | INFO     | ***************************************
[2025-11-25 20:48:37] 2025-11-26 01:48:06,947 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 20:48:37] 2025-11-26 01:48:06,963 | INFO     | sufficient remaining disk space (28247588864 B)
[2025-11-25 20:48:37] 2025-11-26 01:48:06,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:48:37] 2025-11-26 01:48:06,964 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:48:37] 2025-11-26 01:48:06,964 | INFO     | update_server=False
[2025-11-25 20:48:37] 2025-11-26 01:48:06,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:48:37] 2025-11-26 01:48:06,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:48:37] 2025-11-26 01:48:06,964 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:48:37] 2025-11-26 01:48:07,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:48:37] 2025-11-26 01:48:07,037 | INFO     | aborting loop
[2025-11-25 20:48:37] 2025-11-26 01:48:07,079 | INFO     | all job control threads have been joined
[2025-11-25 20:48:37] 2025-11-26 01:48:07,432 | INFO     | all data control threads have been joined
[2025-11-25 20:48:37] 2025-11-26 01:48:07,706 | INFO     | all payload control threads have been joined
[2025-11-25 20:48:37] 2025-11-26 01:48:07,968 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:07,970 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:08,043 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:08,084 | INFO     | [job] control thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:08,197 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:08,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:48:37] 2025-11-26 01:48:08,361 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:08,437 | INFO     | [data] control thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:08,712 | INFO     | [payload] control thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:08,734 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:08,804 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:09,146 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:09,304 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:09,304 | INFO     | [job] validate thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:09,420 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:10,346 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:10,971 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:48:37] 2025-11-26 01:48:13,673 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:48:37] 2025-11-26 01:48:15,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139635037300544)>', '<ExcThread(monitor, started 139634579318528)>']
[2025-11-25 20:48:37] 2025-11-26 01:48:20,532 | INFO     | all workflow threads have been joined
[2025-11-25 20:48:37] 2025-11-26 01:48:20,532 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:48:37] 2025-11-26 01:48:20,532 | INFO     | traces error code: 0
[2025-11-25 20:48:37] 2025-11-26 01:48:20,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:48:37] 2025-11-26 01:48:37,387 | INFO     | PID=19549 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 20:48:37] 2025-11-26 01:48:37,387 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:48:37] 2025-11-26 01:48:37,387 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:48:37] 2025-11-26 01:48:37,387 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:48:37] 2025-11-26 01:48:37,387 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:48:37] 2025-11-26 01:48:37,388 | INFO     | [monitor] control thread has ended
[2025-11-25 20:48:37] 2025-11-26 01:48:37,474 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:48:37] 2025-11-26 01:48:37,478 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:48:37] 2025-11-26 01:48:37,482 [wrapper] pilotpid: 19549
[2025-11-25 20:48:37] 2025-11-26 01:48:37,486 [wrapper] Pilot exit status: 0
[2025-11-25 20:48:37] 2025-11-26 01:48:37,501 [wrapper] pandaids: 6891107098
[2025-11-25 20:48:37] 2025-11-26 01:48:37,541 [wrapper] cleanup supervisor_pilot 11171 19550
[2025-11-25 20:48:37] 2025-11-26 01:48:37,545 [wrapper] Test setup, not cleaning
[2025-11-25 20:48:37] 2025-11-26 01:48:37,549 [wrapper] apfmon messages muted
[2025-11-25 20:48:37] 2025-11-26 01:48:37,553 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:48:37] 2025-11-26 01:48:37,557 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:48:37]  *** Error codes and diagnostics ***
[2025-11-25 20:48:37]     "exeErrorCode": 0,
[2025-11-25 20:48:37]     "exeErrorDiag": "",
[2025-11-25 20:48:37]     "pilotErrorCode": 0,
[2025-11-25 20:48:37]     "pilotErrorDiag": "",
[2025-11-25 20:48:37]  *** Listing of results directory ***
[2025-11-25 20:48:37] total 1313100
[2025-11-25 20:48:37] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 02:02 pilot3.tar.gz
[2025-11-25 20:48:37] -rwx------ 1 boincer umatlas     36292 Nov 18 02:02 runpilot2-wrapper.sh
[2025-11-25 20:48:37] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 02:03 queuedata.json
[2025-11-25 20:48:37] -rw-r--r-- 1 boincer umatlas       100 Nov 25 13:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:48:37] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 13:41 run_atlas
[2025-11-25 20:48:37] -rw-r--r-- 1 boincer umatlas       105 Nov 25 13:41 job.xml
[2025-11-25 20:48:37] -rw-r--r-- 2 boincer umatlas 408915294 Nov 25 13:41 EVNT.47483658._000291.pool.root.1
[2025-11-25 20:48:37] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 13:41 input.tar.gz
[2025-11-25 20:48:37] -rw-r--r-- 2 boincer umatlas     15120 Nov 25 13:41 start_atlas.sh
[2025-11-25 20:48:37] drwxrwx--x 2 boincer umatlas      4096 Nov 25 13:41 shared
[2025-11-25 20:48:37] -rw-r--r-- 1 boincer umatlas         0 Nov 25 13:41 boinc_lockfile
[2025-11-25 20:48:37] -rw-r--r-- 1 boincer umatlas      2773 Nov 25 13:41 pandaJob.out
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas    991543 Nov 25 13:41 agis_schedconf.cvmfs.json
[2025-11-25 20:48:37] drwx------ 5 boincer umatlas      4096 Nov 25 13:41 pilot3
[2025-11-25 20:48:37] -rw-r--r-- 1 boincer umatlas       532 Nov 25 20:39 boinc_task_state.xml
[2025-11-25 20:48:37] -rw-r--r-- 1 boincer umatlas      5956 Nov 25 20:47 init_data.xml
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas 920299137 Nov 25 20:47 HITS.47483661._002603.pool.root.1
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas        95 Nov 25 20:47 pilot_heartbeat.json
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas      1065 Nov 25 20:47 memory_monitor_summary.json
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas   1516240 Nov 25 20:47 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas   2167860 Nov 25 20:48 log.47483661._002603.job.log.tgz.1
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas      8674 Nov 25 20:48 heartbeat.json
[2025-11-25 20:48:37] -rw-r--r-- 1 boincer umatlas        29 Nov 25 20:48 wrapper_checkpoint.txt
[2025-11-25 20:48:37] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 20:48 boinc_mmap_file
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas       745 Nov 25 20:48 pilotlog.txt
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas   3572658 Nov 25 20:48 log.47483661._002603.job.log.1
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas       353 Nov 25 20:48 output.list
[2025-11-25 20:48:37] -rw-r--r-- 1 boincer umatlas       620 Nov 25 20:48 runtime_log
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas   5765120 Nov 25 20:48 result.tar.gz
[2025-11-25 20:48:37] -rw-r--r-- 1 boincer umatlas      8706 Nov 25 20:48 runtime_log.err
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas       670 Nov 25 20:48 GkHMDmbuUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnTKODmujlXcn.diag
[2025-11-25 20:48:37] -rw-r--r-- 1 boincer umatlas     21336 Nov 25 20:48 stderr.txt
[2025-11-25 20:48:37] HITS file was successfully produced:
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas 920299137 Nov 25 20:47 shared/HITS.pool.root.1
[2025-11-25 20:48:37]  *** Contents of shared directory: ***
[2025-11-25 20:48:37] total 1304296
[2025-11-25 20:48:37] -rw-r--r-- 2 boincer umatlas 408915294 Nov 25 13:41 ATLAS.root_0
[2025-11-25 20:48:37] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 13:41 input.tar.gz
[2025-11-25 20:48:37] -rw-r--r-- 2 boincer umatlas     15120 Nov 25 13:41 start_atlas.sh
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas 920299137 Nov 25 20:47 HITS.pool.root.1
[2025-11-25 20:48:37] -rw------- 1 boincer umatlas   5765120 Nov 25 20:48 result.tar.gz
20:48:39 (15863): run_atlas exited; CPU time 288294.291428
20:48:39 (15863): called boinc_finish(0)

</stderr_txt>
]]>

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