Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:21:19 (231550): wrapper (7.7.26015): starting
14:21:19 (231550): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 14:21:19] Arguments: --nthreads 8
[2025-11-25 14:21:19] Threads: 8
[2025-11-25 14:21:19] Checking for CVMFS
[2025-11-25 14:21:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 14:21:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 14:21:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 14:21:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 14:21:20] 2.13.2.0 5195 35538 119912 153295 3 115 21263594 40960000 20806 16776704 0 68843215 99.773 36100533 37445 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 14:21:20] CVMFS is ok
[2025-11-25 14:21:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 14:21:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 14:21:20] Further information can be found at the LHC@home message board.
[2025-11-25 14:21:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 14:21:20] Checking for apptainer binary...
[2025-11-25 14:21:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 14:21:20] Running /usr/bin/apptainer --version
[2025-11-25 14:21:20] apptainer version 1.4.4-1.el9
[2025-11-25 14:21:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 14:21:20] c-212-19.aglt2.org
[2025-11-25 14:21:20] apptainer works
[2025-11-25 14:21:20] Set ATHENA_PROC_NUMBER=8
[2025-11-25 14:21:20] Set ATHENA_CORE_NUMBER=8
[2025-11-25 14:21:20] Starting ATLAS job with PandaID=6896242939
[2025-11-25 14:21:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 09:21:48]  *** The last 200 lines of the pilot log: ***
[2025-11-26 09:21:48] 2025-11-26 14:20:34,013 | INFO     | time since job start (68334s) is within the limit (172800.0s)
[2025-11-26 09:21:48] 2025-11-26 14:20:34,348 | INFO     | monitor loop #4296: job 0:6896242939 is in state 'finished'
[2025-11-26 09:21:48] 2025-11-26 14:20:34,348 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 09:21:48] 2025-11-26 14:20:36,019 | INFO     | time since job start (68336s) is within the limit (172800.0s)
[2025-11-26 09:21:48] 2025-11-26 14:20:36,854 | INFO     | monitor loop #4297: job 0:6896242939 is in state 'finished'
[2025-11-26 09:21:48] 2025-11-26 14:20:36,854 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 09:21:48] 2025-11-26 14:20:38,026 | INFO     | time since job start (68338s) is within the limit (172800.0s)
[2025-11-26 09:21:48] 2025-11-26 14:20:39,374 | INFO     | monitor loop #4298: job 0:6896242939 is in state 'finished'
[2025-11-26 09:21:48] 2025-11-26 14:20:39,374 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 09:21:48] 2025-11-26 14:20:40,033 | INFO     | time since job start (68340s) is within the limit (172800.0s)
[2025-11-26 09:21:48] 2025-11-26 14:20:41,894 | INFO     | monitor loop #4299: job 0:6896242939 is in state 'finished'
[2025-11-26 09:21:48] 2025-11-26 14:20:41,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 09:21:48] 2025-11-26 14:20:42,040 | INFO     | time since job start (68342s) is within the limit (172800.0s)
[2025-11-26 09:21:48] 2025-11-26 14:20:44,046 | INFO     | time since job start (68344s) is within the limit (172800.0s)
[2025-11-26 09:21:48] 2025-11-26 14:20:44,401 | INFO     | monitor loop #4300: job 0:6896242939 is in state 'finished'
[2025-11-26 09:21:48] 2025-11-26 14:20:44,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 09:21:48] 2025-11-26 14:20:44,573 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 09:21:48] 2025-11-26 14:20:44,660 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3138.5529062499995
[2025-11-26 09:21:48] 2025-11-26 14:20:44,712 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896242939/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 09:21:48] 2025-11-26 14:20:44,717 | INFO     | extracted standard info from prmon json
[2025-11-26 09:21:48] 2025-11-26 14:20:44,717 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 09:21:48] 2025-11-26 14:20:44,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 09:21:48] 2025-11-26 14:20:44,749 | INFO     | fitting pss+swap vs Time
[2025-11-26 09:21:48] 2025-11-26 14:20:44,751 | INFO     | sum of square deviations: 435667372677.76715
[2025-11-26 09:21:48] 2025-11-26 14:20:44,775 | INFO     | sum of deviations: 1318042728308.1157
[2025-11-26 09:21:48] 2025-11-26 14:20:44,776 | INFO     | mean x: 1764132669.044643
[2025-11-26 09:21:48] 2025-11-26 14:20:44,776 | INFO     | mean y: 2869381.3776785713
[2025-11-26 09:21:48] 2025-11-26 14:20:44,776 | INFO     | intersect: -5334234983.159781
[2025-11-26 09:21:48] 2025-11-26 14:20:44,777 | INFO     | chi2: 15.228005568943868
[2025-11-26 09:21:48] 2025-11-26 14:20:44,778 | INFO     | sum of square deviations: 429859382105.7851
[2025-11-26 09:21:48] 2025-11-26 14:20:44,892 | INFO     | sum of deviations: 1697992042762.4368
[2025-11-26 09:21:48] 2025-11-26 14:20:44,892 | INFO     | mean x: 1764132516.5515695
[2025-11-26 09:21:48] 2025-11-26 14:20:44,892 | INFO     | mean y: 2879355.348878924
[2025-11-26 09:21:48] 2025-11-26 14:20:44,892 | INFO     | intersect: -6965638955.938956
[2025-11-26 09:21:48] 2025-11-26 14:20:44,893 | INFO     | chi2: 11.829651566991256
[2025-11-26 09:21:48] 2025-11-26 14:20:44,893 | INFO     | current chi2=11.829651566991256 (change=22.316474646445137 %)
[2025-11-26 09:21:48] 2025-11-26 14:20:44,893 | INFO     | right removable region: 1114
[2025-11-26 09:21:48] 2025-11-26 14:20:44,894 | INFO     | sum of square deviations: 429858395005.8869
[2025-11-26 09:21:48] 2025-11-26 14:20:44,920 | INFO     | sum of deviations: 1050246060289.9944
[2025-11-26 09:21:48] 2025-11-26 14:20:44,920 | INFO     | mean x: 1764132821.5506725
[2025-11-26 09:21:48] 2025-11-26 14:20:44,920 | INFO     | mean y: 2876400.876233184
[2025-11-26 09:21:48] 2025-11-26 14:20:44,920 | INFO     | intersect: -4307318694.037504
[2025-11-26 09:21:48] 2025-11-26 14:20:44,921 | INFO     | chi2: 13.25542929371969
[2025-11-26 09:21:48] 2025-11-26 14:20:44,921 | INFO     | current chi2=13.25542929371969 (change=12.953608837962785 %)
[2025-11-26 09:21:48] 2025-11-26 14:20:44,922 | INFO     | left removable region: 10
[2025-11-26 09:21:48] 2025-11-26 14:20:44,922 | INFO     | sum of square deviations: 417262323453.8117
[2025-11-26 09:21:48] 2025-11-26 14:20:44,951 | INFO     | sum of deviations: 1448722515485.601
[2025-11-26 09:21:48] 2025-11-26 14:20:44,952 | INFO     | mean x: 1764132791.0615942
[2025-11-26 09:21:48] 2025-11-26 14:20:44,952 | INFO     | mean y: 2889758.7264492754
[2025-11-26 09:21:48] 2025-11-26 14:20:44,952 | INFO     | intersect: -6122127409.281271
[2025-11-26 09:21:48] 2025-11-26 14:20:44,953 | INFO     | chi2: 9.221675888684823
[2025-11-26 09:21:48] 2025-11-26 14:20:44,954 | INFO     | current memory leak: 3.47 B/s (using 1104 data points, chi2=9.22)
[2025-11-26 09:21:48] 2025-11-26 14:20:44,955 | INFO     | could have reported an average CPU frequency of 3145 MHz (41 samples)
[2025-11-26 09:21:48] 2025-11-26 14:20:44,956 | INFO     | ..............................
[2025-11-26 09:21:48] 2025-11-26 14:20:44,956 | INFO     | . Timing measurements:
[2025-11-26 09:21:48] 2025-11-26 14:20:44,956 | INFO     | . get job = 0 s
[2025-11-26 09:21:48] 2025-11-26 14:20:44,956 | INFO     | . initial setup = 3 s
[2025-11-26 09:21:48] 2025-11-26 14:20:44,956 | INFO     | . payload setup = 11 s
[2025-11-26 09:21:48] 2025-11-26 14:20:44,956 | INFO     | . stage-in = 0 s
[2025-11-26 09:21:48] 2025-11-26 14:20:44,956 | INFO     | . payload execution = 68280 s
[2025-11-26 09:21:48] 2025-11-26 14:20:44,956 | INFO     | . stage-out = 6 s
[2025-11-26 09:21:48] 2025-11-26 14:20:44,956 | INFO     | . log creation = 2 s
[2025-11-26 09:21:48] 2025-11-26 14:20:44,956 | INFO     | ..............................
[2025-11-26 09:21:48] 2025-11-26 14:20:45,116 | INFO     | 
[2025-11-26 09:21:48] 2025-11-26 14:20:45,116 | INFO     | job summary report
[2025-11-26 09:21:48] 2025-11-26 14:20:45,116 | INFO     | --------------------------------------------------
[2025-11-26 09:21:48] 2025-11-26 14:20:45,116 | INFO     | PanDA job id: 6896242939
[2025-11-26 09:21:48] 2025-11-26 14:20:45,116 | INFO     | task id: 47556185
[2025-11-26 09:21:48] 2025-11-26 14:20:45,116 | INFO     | errors: (none)
[2025-11-26 09:21:48] 2025-11-26 14:20:45,116 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | pilot state: finished 
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | transexitcode: 0
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | exeerrorcode: 0
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | exeerrordiag: 
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | exitcode: 0
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | exitmsg: OK
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | cpuconsumptiontime: 209594 s
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | nevents: 1000
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | neventsw: 0
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | pid: 242288
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | pgrp: 242288
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | corecount: 8
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | event service: False
[2025-11-26 09:21:48] 2025-11-26 14:20:45,117 | INFO     | sizes: {0: 2284310, 1: 2284310, 7: 2284600, 12: 2284628, 68296: 2341006, 68297: 2341005, 68303: 2350183, 68305: 2350239, 68325: 2350581}
[2025-11-26 09:21:48] 2025-11-26 14:20:45,118 | INFO     | --------------------------------------------------
[2025-11-26 09:21:48] 2025-11-26 14:20:45,118 | INFO     | 
[2025-11-26 09:21:48] 2025-11-26 14:20:45,118 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 09:21:48] 2025-11-26 14:20:45,157 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,157 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,157 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,158 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,158 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,158 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,159 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 09:21:48] 2025-11-26 14:20:45,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,159 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 09:21:48] 2025-11-26 14:20:45,159 | INFO     | job 6896242939 has completed (purged errors)
[2025-11-26 09:21:48] 2025-11-26 14:20:45,159 | INFO     | overall cleanup function is called
[2025-11-26 09:21:48] 2025-11-26 14:20:46,186 | INFO     | --- collectZombieJob: --- 10, [242288]
[2025-11-26 09:21:48] 2025-11-26 14:20:46,186 | INFO     | zombie collector waiting for pid 242288
[2025-11-26 09:21:48] 2025-11-26 14:20:46,186 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 09:21:48] 2025-11-26 14:20:46,186 | INFO     | collected zombie processes
[2025-11-26 09:21:48] 2025-11-26 14:20:46,186 | INFO     | will attempt to kill all subprocesses of pid=242288
[2025-11-26 09:21:48] 2025-11-26 14:20:46,774 | INFO     | process IDs to be killed: [242288] (in reverse order)
[2025-11-26 09:21:48] 2025-11-26 14:20:47,005 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 09:21:48] 2025-11-26 14:20:47,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 09:21:48] 2025-11-26 14:20:47,040 | INFO     | did not find any defunct processes belonging to 242288
[2025-11-26 09:21:48] 2025-11-26 14:20:47,070 | INFO     | did not find any defunct processes belonging to 242288
[2025-11-26 09:21:48] 2025-11-26 14:20:47,080 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 09:21:48] 2025-11-26 14:20:47,080 | INFO     | ready for new job
[2025-11-26 09:21:48] 2025-11-26 14:20:47,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 09:21:48] 2025-11-26 14:20:47,097 | INFO     | ***************************************
[2025-11-26 09:21:48] 2025-11-26 14:20:47,097 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 09:21:48] 2025-11-26 14:20:47,097 | INFO     | ***************************************
[2025-11-26 09:21:48] 2025-11-26 14:20:47,097 | INFO     | 
[2025-11-26 09:21:48] 2025-11-26 14:20:47,114 | INFO     | architecture information:
[2025-11-26 09:21:48] 2025-11-26 14:20:47,125 | INFO     | executing command: cat /etc/os-release
[2025-11-26 09:21:48] 2025-11-26 14:20:47,249 | INFO     | cat /etc/os-release:
[2025-11-26 09:21:48] NAME="CentOS Linux"
[2025-11-26 09:21:48] VERSION="7 (Core)"
[2025-11-26 09:21:48] ID="centos"
[2025-11-26 09:21:48] ID_LIKE="rhel fedora"
[2025-11-26 09:21:48] VERSION_ID="7"
[2025-11-26 09:21:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 09:21:48] ANSI_COLOR="0;31"
[2025-11-26 09:21:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 09:21:48] HOME_URL="https://www.centos.org/"
[2025-11-26 09:21:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 09:21:48] 
[2025-11-26 09:21:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 09:21:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 09:21:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 09:21:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 09:21:48] 
[2025-11-26 09:21:48] 2025-11-26 14:20:47,250 | INFO     | ***************************************
[2025-11-26 09:21:48] 2025-11-26 14:20:47,753 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 09:21:48] 2025-11-26 14:20:47,867 | INFO     | sufficient remaining disk space (121666273280 B)
[2025-11-26 09:21:48] 2025-11-26 14:20:47,867 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 09:21:48] 2025-11-26 14:20:47,868 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 09:21:48] 2025-11-26 14:20:47,868 | INFO     | update_server=False
[2025-11-26 09:21:48] 2025-11-26 14:20:47,868 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 09:21:48] 2025-11-26 14:20:47,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:21:48] 2025-11-26 14:20:47,926 | INFO     | aborting loop
[2025-11-26 09:21:48] 2025-11-26 14:20:48,163 | INFO     | all data control threads have been joined
[2025-11-26 09:21:48] 2025-11-26 14:20:48,413 | INFO     | all job control threads have been joined
[2025-11-26 09:21:48] 2025-11-26 14:20:48,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 09:21:48] 2025-11-26 14:20:48,874 | INFO     | [job] retrieve thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:48,932 | INFO     | [job] job monitor thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:48,968 | INFO     | [job] validate thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:49,169 | INFO     | [data] control thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:49,232 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 09:21:48] 2025-11-26 14:20:49,358 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:49,405 | INFO     | all payload control threads have been joined
[2025-11-26 09:21:48] 2025-11-26 14:20:49,418 | INFO     | [job] control thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:49,500 | INFO     | [data] copytool_in thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:49,515 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:49,568 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:49,607 | INFO     | [payload] failed_post thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:49,692 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:49,850 | INFO     | [payload] validate_post thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:50,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:21:48] 2025-11-26 14:20:50,415 | INFO     | [payload] control thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:50,735 | INFO     | [data] copytool_out thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:51,136 | INFO     | [job] queue monitor thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:20:53,241 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 09:21:48] 2025-11-26 14:21:17,605 | INFO     | PID=235405 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 09:21:48] 2025-11-26 14:21:17,605 | INFO     | .. there are 19 such processes running
[2025-11-26 09:21:48] 2025-11-26 14:21:17,611 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 09:21:48] 2025-11-26 14:21:17,611 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 09:21:48] 2025-11-26 14:21:17,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 09:21:48] 2025-11-26 14:21:40,958 | INFO     | [monitor] cgroup control has ended
[2025-11-26 09:21:48] 2025-11-26 14:21:41,950 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140422908950336)>', '<ExcThread(monitor, started 140422236055296)>']
[2025-11-26 09:21:48] 2025-11-26 14:21:42,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 09:21:48] 2025-11-26 14:21:42,914 | INFO     | [monitor] control thread has ended
[2025-11-26 09:21:48] 2025-11-26 14:21:45,444 [wrapper] supervise_pilot (15 min periods counter: 77)
[2025-11-26 09:21:48] 2025-11-26 14:21:46,977 | INFO     | all workflow threads have been joined
[2025-11-26 09:21:48] 2025-11-26 14:21:46,977 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 09:21:48] 2025-11-26 14:21:46,977 | INFO     | traces error code: 0
[2025-11-26 09:21:48] 2025-11-26 14:21:46,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 09:21:48] 2025-11-26 14:21:47,324 [wrapper] ==== pilot stdout END ====
[2025-11-26 09:21:48] 2025-11-26 14:21:47,369 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 09:21:48] 2025-11-26 14:21:47,392 [wrapper] pilotpid: 235405
[2025-11-26 09:21:48] 2025-11-26 14:21:47,416 [wrapper] Pilot exit status: 0
[2025-11-26 09:21:48] 2025-11-26 14:21:47,527 [wrapper] pandaids: 6896242939
[2025-11-26 09:21:48] 2025-11-26 14:21:47,927 [wrapper] cleanup supervisor_pilot 3554253 235406
[2025-11-26 09:21:48] 2025-11-26 14:21:47,967 [wrapper] Test setup, not cleaning
[2025-11-26 09:21:48] 2025-11-26 14:21:47,992 [wrapper] apfmon messages muted
[2025-11-26 09:21:48] 2025-11-26 14:21:48,005 [wrapper] ==== wrapper stdout END ====
[2025-11-26 09:21:48] 2025-11-26 14:21:48,026 [wrapper] ==== wrapper stderr END ====
[2025-11-26 09:21:48]  *** Error codes and diagnostics ***
[2025-11-26 09:21:48]     "exeErrorCode": 0,
[2025-11-26 09:21:48]     "exeErrorDiag": "",
[2025-11-26 09:21:48]     "pilotErrorCode": 0,
[2025-11-26 09:21:48]     "pilotErrorDiag": "",
[2025-11-26 09:21:48]  *** Listing of results directory ***
[2025-11-26 09:21:48] total 1315816
[2025-11-26 09:21:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 15:01 pilot3.tar.gz
[2025-11-26 09:21:48] -rwx------. 1 boincer umatlas     36292 Nov 24 15:46 runpilot2-wrapper.sh
[2025-11-26 09:21:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 15:46 queuedata.json
[2025-11-26 09:21:48] -rw-r--r--. 1 boincer umatlas       100 Nov 25 14:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 09:21:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 14:21 run_atlas
[2025-11-26 09:21:48] -rw-r--r--. 1 boincer umatlas       105 Nov 25 14:21 job.xml
[2025-11-26 09:21:48] -rw-r--r--. 2 boincer umatlas 408886875 Nov 25 14:21 EVNT.47483658._004244.pool.root.1
[2025-11-26 09:21:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 14:21 start_atlas.sh
[2025-11-26 09:21:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 14:21 shared
[2025-11-26 09:21:48] -rw-r--r--. 2 boincer umatlas    590095 Nov 25 14:21 input.tar.gz
[2025-11-26 09:21:48] -rw-r--r--. 1 boincer umatlas         0 Nov 25 14:21 boinc_lockfile
[2025-11-26 09:21:48] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 14:21 pandaJob.out
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas        57 Nov 25 14:21 setup.sh.local
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas    991893 Nov 25 14:21 agis_schedconf.cvmfs.json
[2025-11-26 09:21:48] drwx------. 5 boincer umatlas      4096 Nov 25 14:21 pilot3
[2025-11-26 09:21:48] -rw-r--r--. 1 boincer umatlas       532 Nov 26 08:48 boinc_task_state.xml
[2025-11-26 09:21:48] -rw-r--r--. 1 boincer umatlas      6949 Nov 26 09:18 init_data.xml
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas 912507978 Nov 26 09:18 HITS.47556185._000075.pool.root.1
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas      1070 Nov 26 09:20 memory_monitor_summary.json
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas   1516240 Nov 26 09:20 agis_ddmendpoints.agis.ALL.json
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas   2231108 Nov 26 09:20 log.47556185._000075.job.log.tgz.1
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas      8626 Nov 26 09:20 heartbeat.json
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas        95 Nov 26 09:21 pilot_heartbeat.json
[2025-11-26 09:21:48] -rw-r--r--. 1 boincer umatlas        29 Nov 26 09:21 wrapper_checkpoint.txt
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas      4824 Nov 26 09:21 pilotlog.txt
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas   8808456 Nov 26 09:21 log.47556185._000075.job.log.1
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas       353 Nov 26 09:21 output.list
[2025-11-26 09:21:48] -rw-r--r--. 1 boincer umatlas       620 Nov 26 09:21 runtime_log
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas  11059200 Nov 26 09:21 result.tar.gz
[2025-11-26 09:21:48] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 09:21 runtime_log.err
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas       665 Nov 26 09:21 cJEODmKdsh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4uLKDmnn4Kzn.diag
[2025-11-26 09:21:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 09:21 boinc_mmap_file
[2025-11-26 09:21:48] -rw-r--r--. 1 boincer umatlas     21758 Nov 26 09:21 stderr.txt
[2025-11-26 09:21:48] HITS file was successfully produced:
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas 912507978 Nov 26 09:18 shared/HITS.pool.root.1
[2025-11-26 09:21:48]  *** Contents of shared directory: ***
[2025-11-26 09:21:48] total 1301832
[2025-11-26 09:21:48] -rw-r--r--. 2 boincer umatlas 408886875 Nov 25 14:21 ATLAS.root_0
[2025-11-26 09:21:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 14:21 start_atlas.sh
[2025-11-26 09:21:48] -rw-r--r--. 2 boincer umatlas    590095 Nov 25 14:21 input.tar.gz
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas 912507978 Nov 26 09:18 HITS.pool.root.1
[2025-11-26 09:21:48] -rw-------. 1 boincer umatlas  11059200 Nov 26 09:21 result.tar.gz
09:21:49 (231550): run_atlas exited; CPU time 209509.559602
09:21:49 (231550): called boinc_finish(0)

</stderr_txt>
]]>

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