Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:25:14 (3846445): wrapper (7.7.26015): starting
17:25:14 (3846445): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 17:25:14] Arguments: --nthreads 8
[2025-11-25 17:25:14] Threads: 8
[2025-11-25 17:25:14] Checking for CVMFS
[2025-11-25 17:25:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:25:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:25:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:25:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:25:15] 2.13.3.0 9702 29209 324608 153300 3 331 28531449 32935936 21749 16776704 0 149014048 99.704 105135340 32933 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 17:25:15] CVMFS is ok
[2025-11-25 17:25:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:25:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:25:15] Further information can be found at the LHC@home message board.
[2025-11-25 17:25:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:25:15] Checking for apptainer binary...
[2025-11-25 17:25:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:25:15] Running /usr/bin/apptainer --version
[2025-11-25 17:25:15] apptainer version 1.4.4-1.el9
[2025-11-25 17:25:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:25:16] c-4-37.aglt2.org
[2025-11-25 17:25:16] apptainer works
[2025-11-25 17:25:16] Set ATHENA_PROC_NUMBER=8
[2025-11-25 17:25:16] Set ATHENA_CORE_NUMBER=8
[2025-11-25 17:25:16] Starting ATLAS job with PandaID=6896242895
[2025-11-25 17:25:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:17:47]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:17:47] 2025-11-26 17:16:51,731 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 12:17:47] 2025-11-26 17:16:51,731 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 12:17:47] 2025-11-26 17:16:51,778 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:17:47] 2025-11-26 17:16:51,780 | INFO     | sum of square deviations: 426383495885.06537
[2025-11-26 12:17:47] 2025-11-26 17:16:51,850 | INFO     | sum of deviations: 2079605856188.4033
[2025-11-26 12:17:47] 2025-11-26 17:16:51,850 | INFO     | mean x: 1764143459.7302158
[2025-11-26 12:17:47] 2025-11-26 17:16:51,850 | INFO     | mean y: 3000697.404676259
[2025-11-26 12:17:47] 2025-11-26 17:16:51,850 | INFO     | intersect: -8601279499.688969
[2025-11-26 12:17:47] 2025-11-26 17:16:51,856 | INFO     | chi2: 8.766045660516815
[2025-11-26 12:17:47] 2025-11-26 17:16:51,858 | INFO     | sum of square deviations: 420658261577.46356
[2025-11-26 12:17:47] 2025-11-26 17:16:51,922 | INFO     | sum of deviations: 2478060979688.372
[2025-11-26 12:17:47] 2025-11-26 17:16:51,922 | INFO     | mean x: 1764143307.2357724
[2025-11-26 12:17:47] 2025-11-26 17:16:51,922 | INFO     | mean y: 3011310.293586269
[2025-11-26 12:17:47] 2025-11-26 17:16:51,923 | INFO     | intersect: -10389402417.290672
[2025-11-26 12:17:47] 2025-11-26 17:16:51,928 | INFO     | chi2: 5.433388582102231
[2025-11-26 12:17:47] 2025-11-26 17:16:51,929 | INFO     | current chi2=5.433388582102231 (change=38.017792827902085 %)
[2025-11-26 12:17:47] 2025-11-26 17:16:51,930 | INFO     | sum of square deviations: 414984516607.29315
[2025-11-26 12:17:47] 2025-11-26 17:16:51,995 | INFO     | sum of deviations: 2766493932920.737
[2025-11-26 12:17:47] 2025-11-26 17:16:51,995 | INFO     | mean x: 1764143154.7413793
[2025-11-26 12:17:47] 2025-11-26 17:16:51,995 | INFO     | mean y: 3019057.209618875
[2025-11-26 12:17:47] 2025-11-26 17:16:51,995 | INFO     | intersect: -11757639808.562391
[2025-11-26 12:17:47] 2025-11-26 17:16:52,001 | INFO     | chi2: 3.450775612506246
[2025-11-26 12:17:47] 2025-11-26 17:16:52,001 | INFO     | current chi2=3.450775612506246 (change=36.489438214060016 %)
[2025-11-26 12:17:47] 2025-11-26 17:16:52,003 | INFO     | sum of square deviations: 409362028412.0526
[2025-11-26 12:17:47] 2025-11-26 17:16:52,065 | INFO     | sum of deviations: 2912362259282.0786
[2025-11-26 12:17:47] 2025-11-26 17:16:52,065 | INFO     | mean x: 1764143002.2470374
[2025-11-26 12:17:47] 2025-11-26 17:16:52,066 | INFO     | mean y: 3023011.4092980856
[2025-11-26 12:17:47] 2025-11-26 17:16:52,066 | INFO     | intersect: -12547783226.411222
[2025-11-26 12:17:47] 2025-11-26 17:16:52,071 | INFO     | chi2: 2.8551759008273825
[2025-11-26 12:17:47] 2025-11-26 17:16:52,071 | INFO     | current chi2=2.8551759008273825 (change=17.259879475220018 %)
[2025-11-26 12:17:47] 2025-11-26 17:16:52,072 | INFO     | right removable region: 1096
[2025-11-26 12:17:47] 2025-11-26 17:16:52,073 | INFO     | sum of square deviations: 420657427097.4628
[2025-11-26 12:17:47] 2025-11-26 17:16:52,107 | INFO     | sum of deviations: 1739525721252.293
[2025-11-26 12:17:47] 2025-11-26 17:16:52,107 | INFO     | mean x: 1764143612.2357724
[2025-11-26 12:17:47] 2025-11-26 17:16:52,107 | INFO     | mean y: 3009748.113821138
[2025-11-26 12:17:47] 2025-11-26 17:16:52,107 | INFO     | intersect: -7292173913.902084
[2025-11-26 12:17:47] 2025-11-26 17:16:52,109 | INFO     | chi2: 6.4673792045370435
[2025-11-26 12:17:47] 2025-11-26 17:16:52,109 | INFO     | current chi2=6.4673792045370435 (change=26.222387436711685 %)
[2025-11-26 12:17:47] 2025-11-26 17:16:52,110 | INFO     | sum of square deviations: 414983253060.1568
[2025-11-26 12:17:47] 2025-11-26 17:16:52,140 | INFO     | sum of deviations: 1655816166473.7004
[2025-11-26 12:17:47] 2025-11-26 17:16:52,141 | INFO     | mean x: 1764143764.7359347
[2025-11-26 12:17:47] 2025-11-26 17:16:52,141 | INFO     | mean y: 3011997.38384755
[2025-11-26 12:17:47] 2025-11-26 17:16:52,141 | INFO     | intersect: -7036061854.615884
[2025-11-26 12:17:47] 2025-11-26 17:16:52,142 | INFO     | chi2: 6.401343244604946
[2025-11-26 12:17:47] 2025-11-26 17:16:52,142 | INFO     | current chi2=6.401343244604946 (change=1.0210621310989716 %)
[2025-11-26 12:17:47] 2025-11-26 17:16:52,143 | INFO     | left removable region: 20
[2025-11-26 12:17:47] 2025-11-26 17:16:52,144 | INFO     | sum of square deviations: 386299849162.7164
[2025-11-26 12:17:47] 2025-11-26 17:16:52,174 | INFO     | sum of deviations: 2412987502755.8154
[2025-11-26 12:17:47] 2025-11-26 17:16:52,175 | INFO     | mean x: 1764143581.7555761
[2025-11-26 12:17:47] 2025-11-26 17:16:52,175 | INFO     | mean y: 3037949.1133828997
[2025-11-26 12:17:47] 2025-11-26 17:16:52,175 | INFO     | intersect: -11016527357.654375
[2025-11-26 12:17:47] 2025-11-26 17:16:52,176 | INFO     | chi2: 0.38573623316661876
[2025-11-26 12:17:47] 2025-11-26 17:16:52,177 | INFO     | current memory leak: 6.25 B/s (using 1076 data points, chi2=0.39)
[2025-11-26 12:17:47] 2025-11-26 17:16:52,178 | INFO     | could have reported an average CPU frequency of 2599 MHz (40 samples)
[2025-11-26 12:17:47] 2025-11-26 17:16:52,178 | INFO     | ..............................
[2025-11-26 12:17:47] 2025-11-26 17:16:52,178 | INFO     | . Timing measurements:
[2025-11-26 12:17:47] 2025-11-26 17:16:52,178 | INFO     | . get job = 0 s
[2025-11-26 12:17:47] 2025-11-26 17:16:52,178 | INFO     | . initial setup = 3 s
[2025-11-26 12:17:47] 2025-11-26 17:16:52,178 | INFO     | . payload setup = 7 s
[2025-11-26 12:17:47] 2025-11-26 17:16:52,179 | INFO     | . stage-in = 0 s
[2025-11-26 12:17:47] 2025-11-26 17:16:52,179 | INFO     | . payload execution = 67814 s
[2025-11-26 12:17:47] 2025-11-26 17:16:52,179 | INFO     | . stage-out = 5 s
[2025-11-26 12:17:47] 2025-11-26 17:16:52,179 | INFO     | . log creation = 1 s
[2025-11-26 12:17:47] 2025-11-26 17:16:52,179 | INFO     | ..............................
[2025-11-26 12:17:47] 2025-11-26 17:16:52,307 | INFO     | 
[2025-11-26 12:17:47] 2025-11-26 17:16:52,307 | INFO     | job summary report
[2025-11-26 12:17:47] 2025-11-26 17:16:52,307 | INFO     | --------------------------------------------------
[2025-11-26 12:17:47] 2025-11-26 17:16:52,307 | INFO     | PanDA job id: 6896242895
[2025-11-26 12:17:47] 2025-11-26 17:16:52,307 | INFO     | task id: 47556173
[2025-11-26 12:17:47] 2025-11-26 17:16:52,308 | INFO     | errors: (none)
[2025-11-26 12:17:47] 2025-11-26 17:16:52,308 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:17:47] 2025-11-26 17:16:52,308 | INFO     | pilot state: finished 
[2025-11-26 12:17:47] 2025-11-26 17:16:52,308 | INFO     | transexitcode: 0
[2025-11-26 12:17:47] 2025-11-26 17:16:52,308 | INFO     | exeerrorcode: 0
[2025-11-26 12:17:47] 2025-11-26 17:16:52,308 | INFO     | exeerrordiag: 
[2025-11-26 12:17:47] 2025-11-26 17:16:52,308 | INFO     | exitcode: 0
[2025-11-26 12:17:47] 2025-11-26 17:16:52,308 | INFO     | exitmsg: OK
[2025-11-26 12:17:47] 2025-11-26 17:16:52,308 | INFO     | cpuconsumptiontime: 297426 s
[2025-11-26 12:17:47] 2025-11-26 17:16:52,308 | INFO     | nevents: 1000
[2025-11-26 12:17:47] 2025-11-26 17:16:52,309 | INFO     | neventsw: 0
[2025-11-26 12:17:47] 2025-11-26 17:16:52,309 | INFO     | pid: 3868277
[2025-11-26 12:17:47] 2025-11-26 17:16:52,309 | INFO     | pgrp: 3868277
[2025-11-26 12:17:47] 2025-11-26 17:16:52,309 | INFO     | corecount: 8
[2025-11-26 12:17:47] 2025-11-26 17:16:52,309 | INFO     | event service: False
[2025-11-26 12:17:47] 2025-11-26 17:16:52,309 | INFO     | sizes: {0: 2284262, 1: 2284290, 9: 2284552, 12: 2284580, 67826: 2341028, 67827: 2341027, 67833: 2350205, 67835: 2350261, 67855: 2350507}
[2025-11-26 12:17:47] 2025-11-26 17:16:52,309 | INFO     | --------------------------------------------------
[2025-11-26 12:17:47] 2025-11-26 17:16:52,309 | INFO     | 
[2025-11-26 12:17:47] 2025-11-26 17:16:52,309 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 12:17:47] 2025-11-26 17:16:52,335 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,336 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,336 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,336 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,336 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,336 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,337 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:17:47] 2025-11-26 17:16:52,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,338 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:17:47] 2025-11-26 17:16:52,338 | INFO     | job 6896242895 has completed (purged errors)
[2025-11-26 12:17:47] 2025-11-26 17:16:52,338 | INFO     | overall cleanup function is called
[2025-11-26 12:17:47] 2025-11-26 17:16:53,365 | INFO     | --- collectZombieJob: --- 10, [3868277]
[2025-11-26 12:17:47] 2025-11-26 17:16:53,365 | INFO     | zombie collector waiting for pid 3868277
[2025-11-26 12:17:47] 2025-11-26 17:16:53,365 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:17:47] 2025-11-26 17:16:53,365 | INFO     | collected zombie processes
[2025-11-26 12:17:47] 2025-11-26 17:16:53,365 | INFO     | will attempt to kill all subprocesses of pid=3868277
[2025-11-26 12:17:47] 2025-11-26 17:16:53,956 | INFO     | process IDs to be killed: [3868277] (in reverse order)
[2025-11-26 12:17:47] 2025-11-26 17:16:54,095 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:17:47] 2025-11-26 17:16:54,096 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:17:47] 2025-11-26 17:16:54,123 | INFO     | did not find any defunct processes belonging to 3868277
[2025-11-26 12:17:47] 2025-11-26 17:16:54,139 | INFO     | did not find any defunct processes belonging to 3868277
[2025-11-26 12:17:47] 2025-11-26 17:16:54,141 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:17:47] 2025-11-26 17:16:54,141 | INFO     | ready for new job
[2025-11-26 12:17:47] 2025-11-26 17:16:54,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:17:47] 2025-11-26 17:16:54,146 | INFO     | ***************************************
[2025-11-26 12:17:47] 2025-11-26 17:16:54,146 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:17:47] 2025-11-26 17:16:54,147 | INFO     | ***************************************
[2025-11-26 12:17:47] 2025-11-26 17:16:54,147 | INFO     | 
[2025-11-26 12:17:47] 2025-11-26 17:16:54,148 | INFO     | architecture information:
[2025-11-26 12:17:47] 2025-11-26 17:16:54,158 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:17:47] 2025-11-26 17:16:54,211 | INFO     | cat /etc/os-release:
[2025-11-26 12:17:47] NAME="CentOS Linux"
[2025-11-26 12:17:47] VERSION="7 (Core)"
[2025-11-26 12:17:47] ID="centos"
[2025-11-26 12:17:47] ID_LIKE="rhel fedora"
[2025-11-26 12:17:47] VERSION_ID="7"
[2025-11-26 12:17:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:17:47] ANSI_COLOR="0;31"
[2025-11-26 12:17:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:17:47] HOME_URL="https://www.centos.org/"
[2025-11-26 12:17:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:17:47] 
[2025-11-26 12:17:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:17:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:17:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:17:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:17:47] 
[2025-11-26 12:17:47] 2025-11-26 17:16:54,211 | INFO     | ***************************************
[2025-11-26 12:17:47] 2025-11-26 17:16:54,715 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 12:17:47] 2025-11-26 17:16:54,791 | INFO     | sufficient remaining disk space (71775027200 B)
[2025-11-26 12:17:47] 2025-11-26 17:16:54,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:17:47] 2025-11-26 17:16:54,792 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:17:47] 2025-11-26 17:16:54,792 | INFO     | update_server=False
[2025-11-26 12:17:47] 2025-11-26 17:16:54,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:17:47] 2025-11-26 17:16:55,206 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:17:47] 2025-11-26 17:16:55,206 | INFO     | aborting loop
[2025-11-26 12:17:47] 2025-11-26 17:16:55,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:17:47] 2025-11-26 17:16:55,605 | INFO     | all data control threads have been joined
[2025-11-26 12:17:47] 2025-11-26 17:16:55,744 | INFO     | all job control threads have been joined
[2025-11-26 12:17:47] 2025-11-26 17:16:55,798 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:55,910 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:56,035 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:56,040 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:56,211 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:56,283 | INFO     | all payload control threads have been joined
[2025-11-26 12:17:47] 2025-11-26 17:16:56,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:17:47] 2025-11-26 17:16:56,611 | INFO     | [data] control thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:56,750 | INFO     | [job] control thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:56,909 | INFO     | [job] validate thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:56,929 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:56,943 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:56,975 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:57,170 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:57,290 | INFO     | [payload] control thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:57,320 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:17:47] 2025-11-26 17:16:57,597 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:16:58,326 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:17:00,437 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:17:47] 2025-11-26 17:17:25,739 | INFO     | PID=3856160 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 12:17:47] 2025-11-26 17:17:25,740 | INFO     | .. there are 43 such processes running
[2025-11-26 12:17:47] 2025-11-26 17:17:25,741 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:17:47] 2025-11-26 17:17:25,745 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:17:47] 2025-11-26 17:17:25,745 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:17:47] 2025-11-26 17:17:39,400 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:17:47] 2025-11-26 17:17:41,350 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109560620864)>', '<ExcThread(monitor, started 140108913161984)>']
[2025-11-26 12:17:47] 2025-11-26 17:17:41,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:17:47] 2025-11-26 17:17:41,843 | INFO     | [monitor] control thread has ended
[2025-11-26 12:17:47] 2025-11-26 17:17:46,376 | INFO     | all workflow threads have been joined
[2025-11-26 12:17:47] 2025-11-26 17:17:46,376 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:17:47] 2025-11-26 17:17:46,376 | INFO     | traces error code: 0
[2025-11-26 12:17:47] 2025-11-26 17:17:46,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:17:47] 2025-11-26 17:17:46,795 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:17:47] 2025-11-26 17:17:46,844 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:17:47] 2025-11-26 17:17:46,896 [wrapper] pilotpid: 3856160
[2025-11-26 12:17:47] 2025-11-26 17:17:46,942 [wrapper] Pilot exit status: 0
[2025-11-26 12:17:47] 2025-11-26 17:17:47,119 [wrapper] pandaids: 6896242895
[2025-11-26 12:17:47] 2025-11-26 17:17:47,292 [wrapper] cleanup supervisor_pilot 3633200 3856161
[2025-11-26 12:17:47] 2025-11-26 17:17:47,296 [wrapper] Test setup, not cleaning
[2025-11-26 12:17:47] 2025-11-26 17:17:47,299 [wrapper] apfmon messages muted
[2025-11-26 12:17:47] 2025-11-26 17:17:47,301 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:17:47] 2025-11-26 17:17:47,304 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:17:47]  *** Error codes and diagnostics ***
[2025-11-26 12:17:47]     "exeErrorCode": 0,
[2025-11-26 12:17:47]     "exeErrorDiag": "",
[2025-11-26 12:17:47]     "pilotErrorCode": 0,
[2025-11-26 12:17:47]     "pilotErrorDiag": "",
[2025-11-26 12:17:47]  *** Listing of results directory ***
[2025-11-26 12:17:47] total 1330452
[2025-11-26 12:17:47] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 15:01 pilot3.tar.gz
[2025-11-26 12:17:47] -rwx------. 1 boincer umatlas     36292 Nov 24 15:34 runpilot2-wrapper.sh
[2025-11-26 12:17:47] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 15:34 queuedata.json
[2025-11-26 12:17:47] -rw-r--r--. 1 boincer umatlas       100 Nov 25 17:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:17:47] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 17:25 run_atlas
[2025-11-26 12:17:47] -rw-r--r--. 1 boincer umatlas       105 Nov 25 17:25 job.xml
[2025-11-26 12:17:47] -rw-r--r--. 2 boincer umatlas 409295967 Nov 25 17:25 EVNT.47483658._003055.pool.root.1
[2025-11-26 12:17:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:25 start_atlas.sh
[2025-11-26 12:17:47] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 17:25 shared
[2025-11-26 12:17:47] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 17:25 input.tar.gz
[2025-11-26 12:17:47] -rw-r--r--. 1 boincer umatlas         0 Nov 25 17:25 boinc_lockfile
[2025-11-26 12:17:47] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 17:25 pandaJob.out
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas        57 Nov 25 17:25 setup.sh.local
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas    991877 Nov 25 17:25 agis_schedconf.cvmfs.json
[2025-11-26 12:17:47] drwx------. 5 boincer umatlas      4096 Nov 25 17:25 pilot3
[2025-11-26 12:17:47] -rw-r--r--. 1 boincer umatlas       533 Nov 26 11:56 boinc_task_state.xml
[2025-11-26 12:17:47] -rw-r--r--. 1 boincer umatlas      6661 Nov 26 12:13 init_data.xml
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas 927210494 Nov 26 12:15 HITS.47556173._000374.pool.root.1
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas      1057 Nov 26 12:16 memory_monitor_summary.json
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas   1516240 Nov 26 12:16 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas   2226962 Nov 26 12:16 log.47556173._000374.job.log.tgz.1
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas      8610 Nov 26 12:16 heartbeat.json
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas        95 Nov 26 12:17 pilot_heartbeat.json
[2025-11-26 12:17:47] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 12:17 boinc_mmap_file
[2025-11-26 12:17:47] -rw-r--r--. 1 boincer umatlas        29 Nov 26 12:17 wrapper_checkpoint.txt
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas      4824 Nov 26 12:17 pilotlog.txt
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas   8749255 Nov 26 12:17 log.47556173._000374.job.log.1
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas       353 Nov 26 12:17 output.list
[2025-11-26 12:17:47] -rw-r--r--. 1 boincer umatlas       620 Nov 26 12:17 runtime_log
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas  10997760 Nov 26 12:17 result.tar.gz
[2025-11-26 12:17:47] -rw-r--r--. 1 boincer umatlas      9333 Nov 26 12:17 runtime_log.err
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas       658 Nov 26 12:17 PoLMDm5Rsh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsuLKDmHABYAo.diag
[2025-11-26 12:17:47] -rw-r--r--. 1 boincer umatlas     21152 Nov 26 12:17 stderr.txt
[2025-11-26 12:17:47] HITS file was successfully produced:
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas 927210494 Nov 26 12:15 shared/HITS.pool.root.1
[2025-11-26 12:17:47]  *** Contents of shared directory: ***
[2025-11-26 12:17:47] total 1316528
[2025-11-26 12:17:47] -rw-r--r--. 2 boincer umatlas 409295967 Nov 25 17:25 ATLAS.root_0
[2025-11-26 12:17:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:25 start_atlas.sh
[2025-11-26 12:17:47] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 17:25 input.tar.gz
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas 927210494 Nov 26 12:15 HITS.pool.root.1
[2025-11-26 12:17:47] -rw-------. 1 boincer umatlas  10997760 Nov 26 12:17 result.tar.gz
12:17:49 (3846445): run_atlas exited; CPU time 299642.321356
12:17:49 (3846445): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN