Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:29:43 (7361): wrapper (7.7.26015): starting
13:29:43 (7361): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 13:29:43] Arguments: --nthreads 12
[2025-11-25 13:29:43] Threads: 12
[2025-11-25 13:29:43] Checking for CVMFS
[2025-11-25 13:29:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 13:29:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 13:29:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 13:29:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 13:29:44] 2.11.2.0 3081 286556 97512 153293 0 81 17606647 20275200 1 130560 1 129144932 99.965 16825499 14332 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 13:29:44] CVMFS is ok
[2025-11-25 13:29:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:29:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:29:44] Further information can be found at the LHC@home message board.
[2025-11-25 13:29:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:29:44] Checking for apptainer binary...
[2025-11-25 13:29:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 13:29:44] Running /usr/bin/apptainer --version
[2025-11-25 13:29:44] apptainer version 1.3.2-1.el7
[2025-11-25 13:29:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:29:45] c-205-29.aglt2.org
[2025-11-25 13:29:45] apptainer works
[2025-11-25 13:29:45] Set ATHENA_PROC_NUMBER=12
[2025-11-25 13:29:45] Set ATHENA_CORE_NUMBER=12
[2025-11-25 13:29:45] Starting ATLAS job with PandaID=6896242872
[2025-11-25 13:29:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:37:08]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:37:08] 2025-11-26 01:36:34,458 | INFO     | monitor loop #1915: job 0:6896242872 is in state 'finished'
[2025-11-25 20:37:08] 2025-11-26 01:36:34,458 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 20:37:08] 2025-11-26 01:36:34,994 | INFO     | time since job start (25594s) is within the limit (172800.0s)
[2025-11-25 20:37:08] 2025-11-26 01:36:35,732 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 20:37:08] 2025-11-26 01:36:35,736 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2025-11-25 20:37:08] 2025-11-26 01:36:35,738 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896242872/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 20:37:08] 2025-11-26 01:36:35,739 | INFO     | extracted standard info from prmon json
[2025-11-25 20:37:08] 2025-11-26 01:36:35,739 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 20:37:08] 2025-11-26 01:36:35,739 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 20:37:08] 2025-11-26 01:36:35,748 | INFO     | fitting pss+swap vs Time
[2025-11-25 20:37:08] 2025-11-26 01:36:35,748 | INFO     | sum of square deviations: 22809591478.667988
[2025-11-25 20:37:08] 2025-11-26 01:36:35,752 | INFO     | sum of deviations: 381703214762.6566
[2025-11-25 20:37:08] 2025-11-26 01:36:35,752 | INFO     | mean x: 1764108178.214797
[2025-11-25 20:37:08] 2025-11-26 01:36:35,752 | INFO     | mean y: 3433607.603818616
[2025-11-25 20:37:08] 2025-11-26 01:36:35,752 | INFO     | intersect: -29517733548.915733
[2025-11-25 20:37:08] 2025-11-26 01:36:35,753 | INFO     | chi2: 4.871839784142523
[2025-11-25 20:37:08] 2025-11-26 01:36:35,753 | INFO     | sum of square deviations: 22002747985.93475
[2025-11-25 20:37:08] 2025-11-26 01:36:35,757 | INFO     | sum of deviations: 522578017377.7386
[2025-11-25 20:37:08] 2025-11-26 01:36:35,757 | INFO     | mean x: 1764108025.7173913
[2025-11-25 20:37:08] 2025-11-26 01:36:35,757 | INFO     | mean y: 3460200.425120773
[2025-11-25 20:37:08] 2025-11-26 01:36:35,757 | INFO     | intersect: -41895127880.88478
[2025-11-25 20:37:08] 2025-11-26 01:36:35,758 | INFO     | chi2: 2.5103430020486925
[2025-11-25 20:37:08] 2025-11-26 01:36:35,758 | INFO     | current chi2=2.5103430020486925 (change=48.4723818254518 %)
[2025-11-25 20:37:08] 2025-11-26 01:36:35,758 | INFO     | sum of square deviations: 21215135657.6333
[2025-11-25 20:37:08] 2025-11-26 01:36:35,762 | INFO     | sum of deviations: 546906313943.3935
[2025-11-25 20:37:08] 2025-11-26 01:36:35,762 | INFO     | mean x: 1764107873.217604
[2025-11-25 20:37:08] 2025-11-26 01:36:35,762 | INFO     | mean y: 3464869.9731051344
[2025-11-25 20:37:08] 2025-11-26 01:36:35,762 | INFO     | intersect: -45473582739.32743
[2025-11-25 20:37:08] 2025-11-26 01:36:35,763 | INFO     | chi2: 2.2633204317069344
[2025-11-25 20:37:08] 2025-11-26 01:36:35,763 | INFO     | current chi2=2.2633204317069344 (change=9.84019196341547 %)
[2025-11-25 20:37:08] 2025-11-26 01:36:35,763 | INFO     | right removable region: 408
[2025-11-25 20:37:08] 2025-11-26 01:36:35,764 | INFO     | sum of square deviations: 22002693085.93474
[2025-11-25 20:37:08] 2025-11-26 01:36:35,767 | INFO     | sum of deviations: 253331894226.71765
[2025-11-25 20:37:08] 2025-11-26 01:36:35,767 | INFO     | mean x: 1764108330.7173913
[2025-11-25 20:37:08] 2025-11-26 01:36:35,767 | INFO     | mean y: 3457781.997584541
[2025-11-25 20:37:08] 2025-11-26 01:36:35,768 | INFO     | intersect: -20307915162.046906
[2025-11-25 20:37:08] 2025-11-26 01:36:35,768 | INFO     | chi2: 2.7297998942997967
[2025-11-25 20:37:08] 2025-11-26 01:36:35,768 | INFO     | current chi2=2.7297998942997967 (change=43.96778188016172 %)
[2025-11-25 20:37:08] 2025-11-26 01:36:35,769 | INFO     | sum of square deviations: 21215101497.066143
[2025-11-25 20:37:08] 2025-11-26 01:36:35,772 | INFO     | sum of deviations: 222382060818.70163
[2025-11-25 20:37:08] 2025-11-26 01:36:35,772 | INFO     | mean x: 1764108483.215159
[2025-11-25 20:37:08] 2025-11-26 01:36:35,772 | INFO     | mean y: 3463767.4352078238
[2025-11-25 20:37:08] 2025-11-26 01:36:35,773 | INFO     | intersect: -18488367631.975883
[2025-11-25 20:37:08] 2025-11-26 01:36:35,773 | INFO     | chi2: 2.682320389708803
[2025-11-25 20:37:08] 2025-11-26 01:36:35,773 | INFO     | current chi2=2.682320389708803 (change=1.7393034811869454 %)
[2025-11-25 20:37:08] 2025-11-26 01:36:35,773 | INFO     | left removable region: 20
[2025-11-25 20:37:08] 2025-11-26 01:36:35,774 | INFO     | sum of square deviations: 18112154775.93817
[2025-11-25 20:37:08] 2025-11-26 01:36:35,777 | INFO     | sum of deviations: 347028501938.031
[2025-11-25 20:37:08] 2025-11-26 01:36:35,777 | INFO     | mean x: 1764108452.7216494
[2025-11-25 20:37:08] 2025-11-26 01:36:35,777 | INFO     | mean y: 3504231.6391752576
[2025-11-25 20:37:08] 2025-11-26 01:36:35,777 | INFO     | intersect: -33796776363.219055
[2025-11-25 20:37:08] 2025-11-26 01:36:35,778 | INFO     | chi2: 0.03967231722138898
[2025-11-25 20:37:08] 2025-11-26 01:36:35,778 | INFO     | current memory leak: 19.16 B/s (using 388 data points, chi2=0.04)
[2025-11-25 20:37:08] 2025-11-26 01:36:35,778 | INFO     | could have reported an average CPU frequency of 2372 MHz (18 samples)
[2025-11-25 20:37:08] 2025-11-26 01:36:35,778 | INFO     | ..............................
[2025-11-25 20:37:08] 2025-11-26 01:36:35,779 | INFO     | . Timing measurements:
[2025-11-25 20:37:08] 2025-11-26 01:36:35,779 | INFO     | . get job = 0 s
[2025-11-25 20:37:08] 2025-11-26 01:36:35,779 | INFO     | . initial setup = 2 s
[2025-11-25 20:37:08] 2025-11-26 01:36:35,779 | INFO     | . payload setup = 7 s
[2025-11-25 20:37:08] 2025-11-26 01:36:35,779 | INFO     | . stage-in = 0 s
[2025-11-25 20:37:08] 2025-11-26 01:36:35,779 | INFO     | . payload execution = 25557 s
[2025-11-25 20:37:08] 2025-11-26 01:36:35,779 | INFO     | . stage-out = 3 s
[2025-11-25 20:37:08] 2025-11-26 01:36:35,779 | INFO     | . log creation = 0 s
[2025-11-25 20:37:08] 2025-11-26 01:36:35,779 | INFO     | ..............................
[2025-11-25 20:37:08] 2025-11-26 01:36:35,859 | INFO     | 
[2025-11-25 20:37:08] 2025-11-26 01:36:35,859 | INFO     | job summary report
[2025-11-25 20:37:08] 2025-11-26 01:36:35,860 | INFO     | --------------------------------------------------
[2025-11-25 20:37:08] 2025-11-26 01:36:35,860 | INFO     | PanDA job id: 6896242872
[2025-11-25 20:37:08] 2025-11-26 01:36:35,860 | INFO     | task id: 47556173
[2025-11-25 20:37:08] 2025-11-26 01:36:35,860 | INFO     | errors: (none)
[2025-11-25 20:37:08] 2025-11-26 01:36:35,860 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:37:08] 2025-11-26 01:36:35,860 | INFO     | pilot state: finished 
[2025-11-25 20:37:08] 2025-11-26 01:36:35,861 | INFO     | transexitcode: 0
[2025-11-25 20:37:08] 2025-11-26 01:36:35,861 | INFO     | exeerrorcode: 0
[2025-11-25 20:37:08] 2025-11-26 01:36:35,861 | INFO     | exeerrordiag: 
[2025-11-25 20:37:08] 2025-11-26 01:36:35,861 | INFO     | exitcode: 0
[2025-11-25 20:37:08] 2025-11-26 01:36:35,861 | INFO     | exitmsg: OK
[2025-11-25 20:37:08] 2025-11-26 01:36:35,861 | INFO     | cpuconsumptiontime: 293631 s
[2025-11-25 20:37:08] 2025-11-26 01:36:35,861 | INFO     | nevents: 1000
[2025-11-25 20:37:08] 2025-11-26 01:36:35,862 | INFO     | neventsw: 0
[2025-11-25 20:37:08] 2025-11-26 01:36:35,862 | INFO     | pid: 17619
[2025-11-25 20:37:08] 2025-11-26 01:36:35,862 | INFO     | pgrp: 17619
[2025-11-25 20:37:08] 2025-11-26 01:36:35,862 | INFO     | corecount: 12
[2025-11-25 20:37:08] 2025-11-26 01:36:35,862 | INFO     | event service: False
[2025-11-25 20:37:08] 2025-11-26 01:36:35,862 | INFO     | sizes: {0: 2284306, 1: 2284306, 5: 2284596, 11: 2284652, 25568: 2321829, 25572: 2330823, 25574: 2331007, 25579: 2331253}
[2025-11-25 20:37:08] 2025-11-26 01:36:35,863 | INFO     | --------------------------------------------------
[2025-11-25 20:37:08] 2025-11-26 01:36:35,863 | INFO     | 
[2025-11-25 20:37:08] 2025-11-26 01:36:35,863 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 20:37:08] 2025-11-26 01:36:35,887 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,888 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,888 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,888 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,889 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,889 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,889 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,890 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,890 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,890 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,890 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,890 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:37:08] 2025-11-26 01:36:35,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,891 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:37:08] 2025-11-26 01:36:35,891 | INFO     | job 6896242872 has completed (purged errors)
[2025-11-25 20:37:08] 2025-11-26 01:36:35,891 | INFO     | overall cleanup function is called
[2025-11-25 20:37:08] 2025-11-26 01:36:36,906 | INFO     | --- collectZombieJob: --- 10, [17619]
[2025-11-25 20:37:08] 2025-11-26 01:36:36,906 | INFO     | zombie collector waiting for pid 17619
[2025-11-25 20:37:08] 2025-11-26 01:36:36,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:37:08] 2025-11-26 01:36:36,907 | INFO     | collected zombie processes
[2025-11-25 20:37:08] 2025-11-26 01:36:36,907 | INFO     | will attempt to kill all subprocesses of pid=17619
[2025-11-25 20:37:08] 2025-11-26 01:36:36,999 | INFO     | process IDs to be killed: [17619] (in reverse order)
[2025-11-25 20:37:08] 2025-11-26 01:36:37,051 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:37:08] 2025-11-26 01:36:37,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:37:08] 2025-11-26 01:36:37,054 | INFO     | did not find any defunct processes belonging to 17619
[2025-11-25 20:37:08] 2025-11-26 01:36:37,057 | INFO     | did not find any defunct processes belonging to 17619
[2025-11-25 20:37:08] 2025-11-26 01:36:37,059 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:37:08] 2025-11-26 01:36:37,059 | INFO     | ready for new job
[2025-11-25 20:37:08] 2025-11-26 01:36:37,059 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:37:08] 2025-11-26 01:36:37,061 | INFO     | ***************************************
[2025-11-25 20:37:08] 2025-11-26 01:36:37,061 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:37:08] 2025-11-26 01:36:37,061 | INFO     | ***************************************
[2025-11-25 20:37:08] 2025-11-26 01:36:37,061 | INFO     | 
[2025-11-25 20:37:08] 2025-11-26 01:36:37,062 | INFO     | architecture information:
[2025-11-25 20:37:08] 2025-11-26 01:36:37,062 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:37:08] 2025-11-26 01:36:37,078 | INFO     | cat /etc/os-release:
[2025-11-25 20:37:08] NAME="CentOS Linux"
[2025-11-25 20:37:08] VERSION="7 (Core)"
[2025-11-25 20:37:08] ID="centos"
[2025-11-25 20:37:08] ID_LIKE="rhel fedora"
[2025-11-25 20:37:08] VERSION_ID="7"
[2025-11-25 20:37:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:37:08] ANSI_COLOR="0;31"
[2025-11-25 20:37:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:37:08] HOME_URL="https://www.centos.org/"
[2025-11-25 20:37:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:37:08] 
[2025-11-25 20:37:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:37:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:37:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:37:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:37:08] 
[2025-11-25 20:37:08] 2025-11-26 01:36:37,078 | INFO     | ***************************************
[2025-11-25 20:37:08] 2025-11-26 01:36:37,581 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 20:37:08] 2025-11-26 01:36:37,599 | INFO     | sufficient remaining disk space (28248637440 B)
[2025-11-25 20:37:08] 2025-11-26 01:36:37,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:37:08] 2025-11-26 01:36:37,599 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:37:08] 2025-11-26 01:36:37,599 | INFO     | update_server=False
[2025-11-25 20:37:08] 2025-11-26 01:36:37,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:37:08] 2025-11-26 01:36:37,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:37:08] 2025-11-26 01:36:37,600 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:37:08] 2025-11-26 01:36:37,922 | INFO     | all payload control threads have been joined
[2025-11-25 20:37:08] 2025-11-26 01:36:37,966 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:37:08] 2025-11-26 01:36:37,967 | INFO     | aborting loop
[2025-11-25 20:37:08] 2025-11-26 01:36:38,312 | INFO     | all data control threads have been joined
[2025-11-25 20:37:08] 2025-11-26 01:36:38,603 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:38,605 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:38,614 | INFO     | all job control threads have been joined
[2025-11-25 20:37:08] 2025-11-26 01:36:38,806 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:38,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:37:08] 2025-11-26 01:36:38,927 | INFO     | [payload] control thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:38,972 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:39,007 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:39,318 | INFO     | [data] control thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:39,341 | INFO     | [job] validate thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:39,400 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:39,619 | INFO     | [job] control thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:40,068 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:40,080 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:40,092 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:40,879 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:41,606 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:42,033 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:37:08] 2025-11-26 01:36:48,289 | INFO     | job.realtimelogging is not enabled
[2025-11-25 20:37:08] 2025-11-26 01:36:49,293 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:37:08] 2025-11-26 01:36:50,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140656469993280)>', '<ExcThread(monitor, started 140655766509312)>']
[2025-11-25 20:37:08] 2025-11-26 01:36:55,761 | INFO     | all workflow threads have been joined
[2025-11-25 20:37:08] 2025-11-26 01:36:55,762 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:37:08] 2025-11-26 01:36:55,762 | INFO     | traces error code: 0
[2025-11-25 20:37:08] 2025-11-26 01:36:55,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:37:08] 2025-11-26 01:37:08,203 | INFO     | PID=11047 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 20:37:08] 2025-11-26 01:37:08,204 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:37:08] 2025-11-26 01:37:08,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:37:08] 2025-11-26 01:37:08,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:37:08] 2025-11-26 01:37:08,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:37:08] 2025-11-26 01:37:08,204 | INFO     | [monitor] control thread has ended
[2025-11-25 20:37:08] 2025-11-26 01:37:08,288 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:37:08] 2025-11-26 01:37:08,292 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:37:08] 2025-11-26 01:37:08,295 [wrapper] pilotpid: 11047
[2025-11-25 20:37:08] 2025-11-26 01:37:08,299 [wrapper] Pilot exit status: 0
[2025-11-25 20:37:08] 2025-11-26 01:37:08,314 [wrapper] pandaids: 6896242872
[2025-11-25 20:37:08] 2025-11-26 01:37:08,351 [wrapper] cleanup supervisor_pilot 28243 11048
[2025-11-25 20:37:08] 2025-11-26 01:37:08,355 [wrapper] Test setup, not cleaning
[2025-11-25 20:37:08] 2025-11-26 01:37:08,359 [wrapper] apfmon messages muted
[2025-11-25 20:37:08] 2025-11-26 01:37:08,362 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:37:08] 2025-11-26 01:37:08,366 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:37:08]  *** Error codes and diagnostics ***
[2025-11-25 20:37:08]     "exeErrorCode": 0,
[2025-11-25 20:37:08]     "exeErrorDiag": "",
[2025-11-25 20:37:08]     "pilotErrorCode": 0,
[2025-11-25 20:37:08]     "pilotErrorDiag": "",
[2025-11-25 20:37:08]  *** Listing of results directory ***
[2025-11-25 20:37:08] total 1313160
[2025-11-25 20:37:08] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 15:01 pilot3.tar.gz
[2025-11-25 20:37:08] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 15:16 queuedata.json
[2025-11-25 20:37:08] -rwx------ 1 boincer umatlas     36292 Nov 24 15:19 runpilot2-wrapper.sh
[2025-11-25 20:37:08] -rw-r--r-- 1 boincer umatlas       100 Nov 25 13:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:37:08] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 13:29 run_atlas
[2025-11-25 20:37:08] -rw-r--r-- 1 boincer umatlas       105 Nov 25 13:29 job.xml
[2025-11-25 20:37:08] -rw-r--r-- 2 boincer umatlas 409154770 Nov 25 13:29 EVNT.47483658._003053.pool.root.1
[2025-11-25 20:37:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 13:29 start_atlas.sh
[2025-11-25 20:37:08] drwxrwx--x 2 boincer umatlas      4096 Nov 25 13:29 shared
[2025-11-25 20:37:08] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 13:29 input.tar.gz
[2025-11-25 20:37:08] -rw-r--r-- 1 boincer umatlas         0 Nov 25 13:29 boinc_lockfile
[2025-11-25 20:37:08] -rw-r--r-- 1 boincer umatlas      2781 Nov 25 13:29 pandaJob.out
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas        57 Nov 25 13:29 setup.sh.local
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas    991543 Nov 25 13:29 agis_schedconf.cvmfs.json
[2025-11-25 20:37:08] drwx------ 5 boincer umatlas      4096 Nov 25 13:30 pilot3
[2025-11-25 20:37:08] -rw-r--r-- 1 boincer umatlas       533 Nov 25 20:27 boinc_task_state.xml
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas 920072440 Nov 25 20:35 HITS.47556173._000351.pool.root.1
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas      1064 Nov 25 20:36 memory_monitor_summary.json
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas   1516240 Nov 25 20:36 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas   2181054 Nov 25 20:36 log.47556173._000351.job.log.tgz.1
[2025-11-25 20:37:08] -rw-r--r-- 1 boincer umatlas      5955 Nov 25 20:36 init_data.xml
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas      8660 Nov 25 20:36 heartbeat.json
[2025-11-25 20:37:08] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 20:37 boinc_mmap_file
[2025-11-25 20:37:08] -rw-r--r-- 1 boincer umatlas        29 Nov 25 20:37 wrapper_checkpoint.txt
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas        95 Nov 25 20:37 pilot_heartbeat.json
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas       745 Nov 25 20:37 pilotlog.txt
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas   3581664 Nov 25 20:37 log.47556173._000351.job.log.1
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas       353 Nov 25 20:37 output.list
[2025-11-25 20:37:08] -rw-r--r-- 1 boincer umatlas       620 Nov 25 20:37 runtime_log
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas   5785600 Nov 25 20:37 result.tar.gz
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas       670 Nov 25 20:37 Sm4KDmBDsh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmICJKDmDnAbqm.diag
[2025-11-25 20:37:08] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 20:37 runtime_log.err
[2025-11-25 20:37:08] -rw-r--r-- 1 boincer umatlas     21292 Nov 25 20:37 stderr.txt
[2025-11-25 20:37:08] HITS file was successfully produced:
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas 920072440 Nov 25 20:35 shared/HITS.pool.root.1
[2025-11-25 20:37:08]  *** Contents of shared directory: ***
[2025-11-25 20:37:08] total 1304332
[2025-11-25 20:37:08] -rw-r--r-- 2 boincer umatlas 409154770 Nov 25 13:29 ATLAS.root_0
[2025-11-25 20:37:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 13:29 start_atlas.sh
[2025-11-25 20:37:08] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 13:29 input.tar.gz
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas 920072440 Nov 25 20:35 HITS.pool.root.1
[2025-11-25 20:37:08] -rw------- 1 boincer umatlas   5785600 Nov 25 20:37 result.tar.gz
20:37:10 (7361): run_atlas exited; CPU time 287021.435413
20:37:10 (7361): called boinc_finish(0)

</stderr_txt>
]]>

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