Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:43:06 (31828): wrapper (7.7.26015): starting
05:43:06 (31828): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 05:43:06] Arguments: --nthreads 8
[2025-11-28 05:43:06] Threads: 8
[2025-11-28 05:43:06] Checking for CVMFS
[2025-11-28 05:43:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 05:43:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 05:43:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 05:43:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 05:43:09] 2.11.2.0 16837 287804 135884 153397 3 85 21285789 25165824 1288 130560 11 122185894 99.870 74461113 3373 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-28 05:43:09] CVMFS is ok
[2025-11-28 05:43:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 05:43:09] Checking for apptainer binary...
[2025-11-28 05:43:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 05:43:09] Running /usr/bin/apptainer --version
[2025-11-28 05:43:09] apptainer version 1.3.2-1.el7
[2025-11-28 05:43:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 05:43:14] cg-vwn322.simple-grid.lan
[2025-11-28 05:43:14] apptainer works
[2025-11-28 05:43:14] Set ATHENA_PROC_NUMBER=8
[2025-11-28 05:43:14] Set ATHENA_CORE_NUMBER=8
[2025-11-28 05:43:14] Starting ATLAS job with PandaID=6896219687
[2025-11-28 05:43:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 05:17:30]  *** The last 200 lines of the pilot log: ***
[2025-11-29 05:17:30] 2025-11-29 04:16:41,178 | INFO     | monitor loop #5721: job 0:6896219687 is in state 'finished'
[2025-11-29 05:17:30] 2025-11-29 04:16:41,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 05:17:30] 2025-11-29 04:16:41,692 | INFO     | time since job start (84612s) is within the limit (172800.0s)
[2025-11-29 05:17:30] 2025-11-29 04:16:43,683 | INFO     | monitor loop #5722: job 0:6896219687 is in state 'finished'
[2025-11-29 05:17:30] 2025-11-29 04:16:43,683 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 05:17:30] 2025-11-29 04:16:43,701 | INFO     | time since job start (84614s) is within the limit (172800.0s)
[2025-11-29 05:17:30] 2025-11-29 04:16:45,709 | INFO     | time since job start (84616s) is within the limit (172800.0s)
[2025-11-29 05:17:30] 2025-11-29 04:16:46,188 | INFO     | monitor loop #5723: job 0:6896219687 is in state 'finished'
[2025-11-29 05:17:30] 2025-11-29 04:16:46,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 05:17:30] 2025-11-29 04:16:47,718 | INFO     | time since job start (84618s) is within the limit (172800.0s)
[2025-11-29 05:17:30] 2025-11-29 04:16:48,699 | INFO     | monitor loop #5724: job 0:6896219687 is in state 'finished'
[2025-11-29 05:17:30] 2025-11-29 04:16:48,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 05:17:30] 2025-11-29 04:16:49,724 | INFO     | time since job start (84620s) is within the limit (172800.0s)
[2025-11-29 05:17:30] 2025-11-29 04:16:51,204 | INFO     | monitor loop #5725: job 0:6896219687 is in state 'finished'
[2025-11-29 05:17:30] 2025-11-29 04:16:51,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 05:17:30] 2025-11-29 04:16:51,676 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-29 05:17:30] 2025-11-29 04:16:51,677 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-29 05:17:30] 2025-11-29 04:16:51,679 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6896219687/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 05:17:30] 2025-11-29 04:16:51,680 | INFO     | extracted standard info from prmon json
[2025-11-29 05:17:30] 2025-11-29 04:16:51,680 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 05:17:30] 2025-11-29 04:16:51,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 05:17:30] 2025-11-29 04:16:51,706 | INFO     | fitting pss+swap vs Time
[2025-11-29 05:17:30] 2025-11-29 04:16:51,708 | INFO     | sum of square deviations: 809615758431.3066
[2025-11-29 05:17:30] 2025-11-29 04:16:51,737 | INFO     | time since job start (84622s) is within the limit (172800.0s)
[2025-11-29 05:17:30] 2025-11-29 04:16:51,759 | INFO     | sum of deviations: 3107736446057.106
[2025-11-29 05:17:30] 2025-11-29 04:16:51,762 | INFO     | mean x: 1764347684.1067538
[2025-11-29 05:17:30] 2025-11-29 04:16:51,762 | INFO     | mean y: 2837065.59114016
[2025-11-29 05:17:30] 2025-11-29 04:16:51,762 | INFO     | intersect: -6769668958.796273
[2025-11-29 05:17:30] 2025-11-29 04:16:51,764 | INFO     | chi2: 23.989147630185702
[2025-11-29 05:17:30] 2025-11-29 04:16:51,766 | INFO     | sum of square deviations: 800828839880.1606
[2025-11-29 05:17:30] 2025-11-29 04:16:51,814 | INFO     | sum of deviations: 3587363330786.776
[2025-11-29 05:17:30] 2025-11-29 04:16:51,815 | INFO     | mean x: 1764347531.6107872
[2025-11-29 05:17:30] 2025-11-29 04:16:51,815 | INFO     | mean y: 2845389.3797376095
[2025-11-29 05:17:30] 2025-11-29 04:16:51,815 | INFO     | intersect: -7900660731.368673
[2025-11-29 05:17:30] 2025-11-29 04:16:51,817 | INFO     | chi2: 20.42048254749757
[2025-11-29 05:17:30] 2025-11-29 04:16:51,817 | INFO     | current chi2=20.42048254749757 (change=14.876164579510348 %)
[2025-11-29 05:17:30] 2025-11-29 04:16:51,817 | INFO     | right removable region: 1371
[2025-11-29 05:17:30] 2025-11-29 04:16:51,819 | INFO     | sum of square deviations: 800827910240.1605
[2025-11-29 05:17:30] 2025-11-29 04:16:51,867 | INFO     | sum of deviations: 2536385263888.1787
[2025-11-29 05:17:30] 2025-11-29 04:16:51,868 | INFO     | mean x: 1764347836.6107872
[2025-11-29 05:17:30] 2025-11-29 04:16:51,868 | INFO     | mean y: 2846980.1501457724
[2025-11-29 05:17:30] 2025-11-29 04:16:51,868 | INFO     | intersect: -5585202332.230288
[2025-11-29 05:17:30] 2025-11-29 04:16:51,869 | INFO     | chi2: 19.385129232579388
[2025-11-29 05:17:30] 2025-11-29 04:16:51,870 | INFO     | current chi2=19.385129232579388 (change=19.192088308352595 %)
[2025-11-29 05:17:30] 2025-11-29 04:16:51,870 | INFO     | left removable region: 10
[2025-11-29 05:17:30] 2025-11-29 04:16:51,871 | INFO     | sum of square deviations: 781720061667.4781
[2025-11-29 05:17:30] 2025-11-29 04:16:51,920 | INFO     | sum of deviations: 2621338923669.4224
[2025-11-29 05:17:30] 2025-11-29 04:16:51,920 | INFO     | mean x: 1764347806.1197648
[2025-11-29 05:17:30] 2025-11-29 04:16:51,921 | INFO     | mean y: 2866215.954445261
[2025-11-29 05:17:30] 2025-11-29 04:16:51,921 | INFO     | intersect: -5913514603.551524
[2025-11-29 05:17:30] 2025-11-29 04:16:51,923 | INFO     | chi2: 11.357513738126396
[2025-11-29 05:17:30] 2025-11-29 04:16:51,923 | INFO     | current memory leak: 3.35 B/s (using 1361 data points, chi2=11.36)
[2025-11-29 05:17:30] 2025-11-29 04:16:51,924 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-29 05:17:30] 2025-11-29 04:16:51,925 | INFO     | ..............................
[2025-11-29 05:17:30] 2025-11-29 04:16:51,925 | INFO     | . Timing measurements:
[2025-11-29 05:17:30] 2025-11-29 04:16:51,925 | INFO     | . get job = 0 s
[2025-11-29 05:17:30] 2025-11-29 04:16:51,925 | INFO     | . initial setup = 7 s
[2025-11-29 05:17:30] 2025-11-29 04:16:51,925 | INFO     | . payload setup = 170 s
[2025-11-29 05:17:30] 2025-11-29 04:16:51,925 | INFO     | . stage-in = 0 s
[2025-11-29 05:17:30] 2025-11-29 04:16:51,925 | INFO     | . payload execution = 84151 s
[2025-11-29 05:17:30] 2025-11-29 04:16:51,925 | INFO     | . stage-out = 5 s
[2025-11-29 05:17:30] 2025-11-29 04:16:51,925 | INFO     | . log creation = 2 s
[2025-11-29 05:17:30] 2025-11-29 04:16:51,925 | INFO     | ..............................
[2025-11-29 05:17:30] 2025-11-29 04:16:52,035 | INFO     | 
[2025-11-29 05:17:30] 2025-11-29 04:16:52,036 | INFO     | job summary report
[2025-11-29 05:17:30] 2025-11-29 04:16:52,036 | INFO     | --------------------------------------------------
[2025-11-29 05:17:30] 2025-11-29 04:16:52,036 | INFO     | PanDA job id: 6896219687
[2025-11-29 05:17:30] 2025-11-29 04:16:52,036 | INFO     | task id: 47556149
[2025-11-29 05:17:30] 2025-11-29 04:16:52,036 | INFO     | errors: (none)
[2025-11-29 05:17:30] 2025-11-29 04:16:52,036 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 05:17:30] 2025-11-29 04:16:52,036 | INFO     | pilot state: finished 
[2025-11-29 05:17:30] 2025-11-29 04:16:52,036 | INFO     | transexitcode: 0
[2025-11-29 05:17:30] 2025-11-29 04:16:52,036 | INFO     | exeerrorcode: 0
[2025-11-29 05:17:30] 2025-11-29 04:16:52,037 | INFO     | exeerrordiag: 
[2025-11-29 05:17:30] 2025-11-29 04:16:52,037 | INFO     | exitcode: 0
[2025-11-29 05:17:30] 2025-11-29 04:16:52,037 | INFO     | exitmsg: OK
[2025-11-29 05:17:30] 2025-11-29 04:16:52,037 | INFO     | cpuconsumptiontime: 313419 s
[2025-11-29 05:17:30] 2025-11-29 04:16:52,037 | INFO     | nevents: 1000
[2025-11-29 05:17:30] 2025-11-29 04:16:52,037 | INFO     | neventsw: 0
[2025-11-29 05:17:30] 2025-11-29 04:16:52,037 | INFO     | pid: 9785
[2025-11-29 05:17:30] 2025-11-29 04:16:52,037 | INFO     | pgrp: 9785
[2025-11-29 05:17:30] 2025-11-29 04:16:52,037 | INFO     | corecount: 8
[2025-11-29 05:17:30] 2025-11-29 04:16:52,037 | INFO     | event service: False
[2025-11-29 05:17:30] 2025-11-29 04:16:52,037 | INFO     | sizes: {0: 2284087, 1: 2284171, 2: 2284342, 3: 2284370, 13: 2284398, 24: 2284454, 35: 2284610, 46: 2284638, 56: 2284666, 67: 2284694, 78: 2284722, 88: 2285058, 94:
[2025-11-29 05:17:30] 2025-11-29 04:16:52,038 | INFO     | --------------------------------------------------
[2025-11-29 05:17:30] 2025-11-29 04:16:52,038 | INFO     | 
[2025-11-29 05:17:30] 2025-11-29 04:16:52,038 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-29 05:17:30] 2025-11-29 04:16:52,071 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,071 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,071 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,071 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,072 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,072 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,072 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,072 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,072 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,072 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,072 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,072 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,072 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,073 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,073 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 05:17:30] 2025-11-29 04:16:52,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,073 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 05:17:30] 2025-11-29 04:16:52,073 | INFO     | job 6896219687 has completed (purged errors)
[2025-11-29 05:17:30] 2025-11-29 04:16:52,073 | INFO     | overall cleanup function is called
[2025-11-29 05:17:30] 2025-11-29 04:16:53,089 | INFO     | --- collectZombieJob: --- 10, [9785]
[2025-11-29 05:17:30] 2025-11-29 04:16:53,089 | INFO     | zombie collector waiting for pid 9785
[2025-11-29 05:17:30] 2025-11-29 04:16:53,089 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 05:17:30] 2025-11-29 04:16:53,089 | INFO     | collected zombie processes
[2025-11-29 05:17:30] 2025-11-29 04:16:53,089 | INFO     | will attempt to kill all subprocesses of pid=9785
[2025-11-29 05:17:30] 2025-11-29 04:16:53,179 | INFO     | process IDs to be killed: [9785] (in reverse order)
[2025-11-29 05:17:30] 2025-11-29 04:16:53,988 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 05:17:30] 2025-11-29 04:16:53,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 05:17:30] 2025-11-29 04:16:53,991 | INFO     | did not find any defunct processes belonging to 9785
[2025-11-29 05:17:30] 2025-11-29 04:16:53,993 | INFO     | did not find any defunct processes belonging to 9785
[2025-11-29 05:17:30] 2025-11-29 04:16:54,036 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 05:17:30] 2025-11-29 04:16:54,037 | INFO     | ready for new job
[2025-11-29 05:17:30] 2025-11-29 04:16:54,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 05:17:30] 2025-11-29 04:16:54,042 | INFO     | ***************************************
[2025-11-29 05:17:30] 2025-11-29 04:16:54,042 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 05:17:30] 2025-11-29 04:16:54,043 | INFO     | ***************************************
[2025-11-29 05:17:30] 2025-11-29 04:16:54,043 | INFO     | 
[2025-11-29 05:17:30] 2025-11-29 04:16:54,043 | INFO     | pilot is running in a VM
[2025-11-29 05:17:30] 2025-11-29 04:16:54,043 | INFO     | architecture information:
[2025-11-29 05:17:30] 2025-11-29 04:16:54,052 | INFO     | executing command: cat /etc/os-release
[2025-11-29 05:17:30] 2025-11-29 04:16:54,408 | INFO     | cat /etc/os-release:
[2025-11-29 05:17:30] NAME="CentOS Linux"
[2025-11-29 05:17:30] VERSION="7 (Core)"
[2025-11-29 05:17:30] ID="centos"
[2025-11-29 05:17:30] ID_LIKE="rhel fedora"
[2025-11-29 05:17:30] VERSION_ID="7"
[2025-11-29 05:17:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 05:17:30] ANSI_COLOR="0;31"
[2025-11-29 05:17:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 05:17:30] HOME_URL="https://www.centos.org/"
[2025-11-29 05:17:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 05:17:30] 
[2025-11-29 05:17:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 05:17:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 05:17:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 05:17:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 05:17:30] 
[2025-11-29 05:17:30] 2025-11-29 04:16:54,409 | INFO     | ***************************************
[2025-11-29 05:17:30] 2025-11-29 04:16:54,912 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-29 05:17:30] 2025-11-29 04:16:54,943 | INFO     | sufficient remaining disk space (493731446784 B)
[2025-11-29 05:17:30] 2025-11-29 04:16:54,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 05:17:30] 2025-11-29 04:16:54,944 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 05:17:30] 2025-11-29 04:16:54,944 | INFO     | update_server=False
[2025-11-29 05:17:30] 2025-11-29 04:16:54,944 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 05:17:30] 2025-11-29 04:16:54,944 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 05:17:30] 2025-11-29 04:16:54,945 | INFO     | aborting loop
[2025-11-29 05:17:30] 2025-11-29 04:16:54,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 05:17:30] 2025-11-29 04:16:55,273 | INFO     | all payload control threads have been joined
[2025-11-29 05:17:30] 2025-11-29 04:16:55,950 | INFO     | [job] job monitor thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:55,952 | INFO     | [job] retrieve thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:55,992 | INFO     | all data control threads have been joined
[2025-11-29 05:17:30] 2025-11-29 04:16:56,048 | INFO     | [job] validate thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:56,082 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:56,279 | INFO     | [payload] control thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:56,382 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:56,400 | INFO     | all job control threads have been joined
[2025-11-29 05:17:30] 2025-11-29 04:16:56,411 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 05:17:30] 2025-11-29 04:16:56,509 | INFO     | [monitor] cgroup control has ended
[2025-11-29 05:17:30] 2025-11-29 04:16:56,628 | INFO     | [data] copytool_in thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:56,740 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:56,952 | INFO     | [data] copytool_out thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:56,998 | INFO     | [data] control thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:57,053 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 05:17:30] 2025-11-29 04:16:57,273 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:57,298 | INFO     | [payload] validate_post thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:57,406 | INFO     | [job] control thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:57,475 | INFO     | [payload] failed_post thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:16:58,059 | INFO     | [job] queue monitor thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:17:00,422 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 05:17:30] 2025-11-29 04:17:01,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139761439496000)>', '<ExcThread(monitor, started 139760777553664)>']
[2025-11-29 05:17:30] 2025-11-29 04:17:06,236 | INFO     | all workflow threads have been joined
[2025-11-29 05:17:30] 2025-11-29 04:17:06,236 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 05:17:30] 2025-11-29 04:17:06,236 | INFO     | traces error code: 0
[2025-11-29 05:17:30] 2025-11-29 04:17:06,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 05:17:30] 2025-11-29 04:17:24,895 | INFO     | PID=3184 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-29 05:17:30] 2025-11-29 04:17:24,896 | INFO     | .. there are 9 such processes running
[2025-11-29 05:17:30] 2025-11-29 04:17:24,896 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 05:17:30] 2025-11-29 04:17:24,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 05:17:30] 2025-11-29 04:17:24,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 05:17:30] 2025-11-29 04:17:24,896 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 05:17:30] 2025-11-29 04:17:24,896 | INFO     | [monitor] control thread has ended
[2025-11-29 05:17:30] 2025-11-29 04:17:25,023 [wrapper] ==== pilot stdout END ====
[2025-11-29 05:17:30] 2025-11-29 04:17:25,073 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 05:17:30] 2025-11-29 04:17:25,157 [wrapper] pilotpid: 3184
[2025-11-29 05:17:30] 2025-11-29 04:17:25,237 [wrapper] Pilot exit status: 0
[2025-11-29 05:17:30] 2025-11-29 04:17:25,619 [wrapper] pandaids: 6896219687
[2025-11-29 05:17:30] 2025-11-29 04:17:26,715 [wrapper] cleanup supervisor_pilot  3779 3185
[2025-11-29 05:17:30] 2025-11-29 04:17:26,781 [wrapper] Test setup, not cleaning
[2025-11-29 05:17:30] 2025-11-29 04:17:26,873 [wrapper] apfmon messages muted
[2025-11-29 05:17:30] 2025-11-29 04:17:26,960 [wrapper] ==== wrapper stdout END ====
[2025-11-29 05:17:30] 2025-11-29 04:17:27,078 [wrapper] ==== wrapper stderr END ====
[2025-11-29 05:17:30]  *** Error codes and diagnostics ***
[2025-11-29 05:17:30]     "exeErrorCode": 0,
[2025-11-29 05:17:30]     "exeErrorDiag": "",
[2025-11-29 05:17:30]     "pilotErrorCode": 0,
[2025-11-29 05:17:30]     "pilotErrorDiag": "",
[2025-11-29 05:17:30]  *** Listing of results directory ***
[2025-11-29 05:17:30] total 1319616
[2025-11-29 05:17:30] -rw-r--r--. 1 boinc boinc    576529 Nov 24 21:01 pilot3.tar.gz
[2025-11-29 05:17:30] -rwx------. 1 boinc boinc     36292 Nov 24 21:07 runpilot2-wrapper.sh
[2025-11-29 05:17:30] -rw-r--r--. 1 boinc boinc      5112 Nov 24 21:07 queuedata.json
[2025-11-29 05:17:30] -rw-r--r--. 1 boinc boinc       100 Nov 28 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 05:17:30] -rwxr-xr-x. 1 boinc boinc      7986 Nov 28 05:43 run_atlas
[2025-11-29 05:17:30] -rw-r--r--. 1 boinc boinc       105 Nov 28 05:43 job.xml
[2025-11-29 05:17:30] -rw-r--r--. 1 boinc boinc      6390 Nov 28 05:43 init_data.xml
[2025-11-29 05:17:30] -rw-r--r--. 2 boinc boinc 408250587 Nov 28 05:43 EVNT.47483658._001416.pool.root.1
[2025-11-29 05:17:30] -rw-r--r--. 2 boinc boinc     15847 Nov 28 05:43 start_atlas.sh
[2025-11-29 05:17:30] drwxrwx--x. 2 boinc boinc        68 Nov 28 05:43 shared
[2025-11-29 05:17:30] -rw-r--r--. 2 boinc boinc    590104 Nov 28 05:43 input.tar.gz
[2025-11-29 05:17:30] -rw-r--r--. 1 boinc boinc         0 Nov 28 05:43 boinc_lockfile
[2025-11-29 05:17:30] -rw-r--r--. 1 boinc boinc      2785 Nov 28 05:43 pandaJob.out
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc    991858 Nov 28 05:46 agis_schedconf.cvmfs.json
[2025-11-29 05:17:30] drwx------. 5 boinc boinc      4096 Nov 28 05:46 pilot3
[2025-11-29 05:17:30] -rw-r--r--. 1 boinc boinc       533 Nov 29 04:49 boinc_task_state.xml
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc 911571902 Nov 29 05:14 HITS.47556149._004026.pool.root.1
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc      1033 Nov 29 05:15 memory_monitor_summary.json
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc   1516240 Nov 29 05:15 agis_ddmendpoints.agis.ALL.json
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc   2471342 Nov 29 05:15 log.47556149._004026.job.log.tgz.1
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc        95 Nov 29 05:16 pilot_heartbeat.json
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc      8626 Nov 29 05:16 heartbeat.json
[2025-11-29 05:17:30] -rw-r--r--. 1 boinc boinc      8192 Nov 29 05:17 boinc_mmap_file
[2025-11-29 05:17:30] -rw-r--r--. 1 boinc boinc        29 Nov 29 05:17 wrapper_checkpoint.txt
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc       819 Nov 29 05:17 pilotlog.txt
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc  11308270 Nov 29 05:17 log.47556149._004026.job.log.1
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc       353 Nov 29 05:17 output.list
[2025-11-29 05:17:30] -rw-r--r--. 1 boinc boinc       620 Nov 29 05:17 runtime_log
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc  13803520 Nov 29 05:17 result.tar.gz
[2025-11-29 05:17:30] -rw-r--r--. 1 boinc boinc      8817 Nov 29 05:17 runtime_log.err
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc       662 Nov 29 05:17 CuSLDm21rh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1BJKDmq8XOEm.diag
[2025-11-29 05:17:30] -rw-r--r--. 1 boinc boinc     21433 Nov 29 05:17 stderr.txt
[2025-11-29 05:17:30] HITS file was successfully produced:
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc 911571902 Nov 29 05:14 shared/HITS.pool.root.1
[2025-11-29 05:17:30]  *** Contents of shared directory: ***
[2025-11-29 05:17:30] total 1302968
[2025-11-29 05:17:30] -rw-r--r--. 2 boinc boinc 408250587 Nov 28 05:43 ATLAS.root_0
[2025-11-29 05:17:30] -rw-r--r--. 2 boinc boinc     15847 Nov 28 05:43 start_atlas.sh
[2025-11-29 05:17:30] -rw-r--r--. 2 boinc boinc    590104 Nov 28 05:43 input.tar.gz
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc 911571902 Nov 29 05:14 HITS.pool.root.1
[2025-11-29 05:17:30] -rw-------. 1 boinc boinc  13803520 Nov 29 05:17 result.tar.gz
05:17:31 (31828): run_atlas exited; CPU time 313942.046703
05:17:31 (31828): called boinc_finish(0)

</stderr_txt>
]]>

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