Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:00:10 (1366885): wrapper (7.7.26015): starting
21:00:10 (1366885): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 21:00:10] Arguments: --nthreads 3
[2025-11-27 21:00:10] Threads: 3
[2025-11-27 21:00:10] Checking for CVMFS
[2025-11-27 21:00:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 21:01:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 21:01:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 21:01:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 21:01:04] 2.13.3.0 1367104 0 28976 153363 3 1 41691024 52428800 0 130560 0 0 0.000 1293 51 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-27 21:01:04] CVMFS is ok
[2025-11-27 21:01:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 21:01:04] Checking for apptainer binary...
[2025-11-27 21:01:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 21:01:04] Running /usr/bin/apptainer --version
[2025-11-27 21:01:04] apptainer version 1.4.4-1.el9
[2025-11-27 21:01:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 21:01:04] testio004
[2025-11-27 21:01:04] apptainer works
[2025-11-27 21:01:04] Set ATHENA_PROC_NUMBER=3
[2025-11-27 21:01:04] Set ATHENA_CORE_NUMBER=3
[2025-11-27 21:01:05] Starting ATLAS job with PandaID=6896218920
[2025-11-27 21:01:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 08:59:21]  *** The last 200 lines of the pilot log: ***
[2025-11-28 08:59:21] 2025-11-27 23:58:49,378 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 08:59:21] 2025-11-27 23:58:49,378 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 08:59:21] 2025-11-27 23:58:49,383 | INFO     | fitting pss+swap vs Time
[2025-11-28 08:59:21] 2025-11-27 23:58:49,384 | INFO     | sum of square deviations: 107733367429.00395
[2025-11-28 08:59:21] 2025-11-27 23:58:49,389 | INFO     | sum of deviations: 322436072067.4945
[2025-11-28 08:59:21] 2025-11-27 23:58:49,389 | INFO     | mean x: 1764266400.0753913
[2025-11-28 08:59:21] 2025-11-27 23:58:49,389 | INFO     | mean y: 2191815.3869132292
[2025-11-28 08:59:21] 2025-11-27 23:58:49,389 | INFO     | intersect: -5278095450.263142
[2025-11-28 08:59:21] 2025-11-27 23:58:49,389 | INFO     | chi2: 6.807786435135853
[2025-11-28 08:59:21] 2025-11-27 23:58:49,390 | INFO     | sum of square deviations: 105451005916.47556
[2025-11-28 08:59:21] 2025-11-27 23:58:49,394 | INFO     | sum of deviations: 473372984764.5243
[2025-11-28 08:59:21] 2025-11-27 23:58:49,395 | INFO     | mean x: 1764266247.5759313
[2025-11-28 08:59:21] 2025-11-27 23:58:49,395 | INFO     | mean y: 2201903.424068768
[2025-11-28 08:59:21] 2025-11-27 23:58:49,395 | INFO     | intersect: -7917646487.551232
[2025-11-28 08:59:21] 2025-11-27 23:58:49,395 | INFO     | chi2: 4.65373946632812
[2025-11-28 08:59:21] 2025-11-27 23:58:49,395 | INFO     | current chi2=4.65373946632812 (change=31.64093041594874 %)
[2025-11-28 08:59:21] 2025-11-27 23:58:49,395 | INFO     | sum of square deviations: 103201110128.94702
[2025-11-28 08:59:21] 2025-11-27 23:58:49,400 | INFO     | sum of deviations: 504442388277.5071
[2025-11-28 08:59:21] 2025-11-27 23:58:49,400 | INFO     | mean x: 1764266095.076479
[2025-11-28 08:59:21] 2025-11-27 23:58:49,400 | INFO     | mean y: 2203994.896103896
[2025-11-28 08:59:21] 2025-11-27 23:58:49,400 | INFO     | intersect: -8621449388.729479
[2025-11-28 08:59:21] 2025-11-27 23:58:49,401 | INFO     | chi2: 4.137463288673249
[2025-11-28 08:59:21] 2025-11-27 23:58:49,401 | INFO     | current chi2=4.137463288673249 (change=11.0937920223158 %)
[2025-11-28 08:59:21] 2025-11-27 23:58:49,401 | INFO     | right removable region: 692
[2025-11-28 08:59:21] 2025-11-27 23:58:49,401 | INFO     | sum of square deviations: 105450973586.47556
[2025-11-28 08:59:21] 2025-11-27 23:58:49,406 | INFO     | sum of deviations: 154577443988.28705
[2025-11-28 08:59:21] 2025-11-27 23:58:49,406 | INFO     | mean x: 1764266552.5759313
[2025-11-28 08:59:21] 2025-11-27 23:58:49,406 | INFO     | mean y: 2203024.636103152
[2025-11-28 08:59:21] 2025-11-27 23:58:49,406 | INFO     | intersect: -2583982810.6949706
[2025-11-28 08:59:21] 2025-11-27 23:58:49,406 | INFO     | chi2: 4.139264249996202
[2025-11-28 08:59:21] 2025-11-27 23:58:49,406 | INFO     | current chi2=4.139264249996202 (change=39.19808899067497 %)
[2025-11-28 08:59:21] 2025-11-27 23:58:49,407 | INFO     | sum of square deviations: 103201045468.94704
[2025-11-28 08:59:21] 2025-11-27 23:58:49,412 | INFO     | sum of deviations: 32714830445.140133
[2025-11-28 08:59:21] 2025-11-27 23:58:49,412 | INFO     | mean x: 1764266705.076479
[2025-11-28 08:59:21] 2025-11-27 23:58:49,412 | INFO     | mean y: 2211279.2049062047
[2025-11-28 08:59:21] 2025-11-27 23:58:49,412 | INFO     | intersect: -557062959.2905767
[2025-11-28 08:59:21] 2025-11-27 23:58:49,412 | INFO     | chi2: 2.7846021641216727
[2025-11-28 08:59:21] 2025-11-27 23:58:49,412 | INFO     | current chi2=2.7846021641216727 (change=32.72712260097365 %)
[2025-11-28 08:59:21] 2025-11-27 23:58:49,412 | INFO     | sum of square deviations: 100983350513.91676
[2025-11-28 08:59:21] 2025-11-27 23:58:49,417 | INFO     | sum of deviations: 16324124486.111973
[2025-11-28 08:59:21] 2025-11-27 23:58:49,417 | INFO     | mean x: 1764266857.577035
[2025-11-28 08:59:21] 2025-11-27 23:58:49,417 | INFO     | mean y: 2212405.0450581396
[2025-11-28 08:59:21] 2025-11-27 23:58:49,417 | INFO     | intersect: -282984230.47200257
[2025-11-28 08:59:21] 2025-11-27 23:58:49,418 | INFO     | chi2: 2.7642088923810566
[2025-11-28 08:59:21] 2025-11-27 23:58:49,418 | INFO     | current chi2=2.7642088923810566 (change=0.7323585395204424 %)
[2025-11-28 08:59:21] 2025-11-27 23:58:49,418 | INFO     | left removable region: 30
[2025-11-28 08:59:21] 2025-11-27 23:58:49,418 | INFO     | sum of square deviations: 89962009075.25677
[2025-11-28 08:59:21] 2025-11-27 23:58:49,422 | INFO     | sum of deviations: 169280856662.41995
[2025-11-28 08:59:21] 2025-11-27 23:58:49,422 | INFO     | mean x: 1764266979.5800605
[2025-11-28 08:59:21] 2025-11-27 23:58:49,422 | INFO     | mean y: 2227126.501510574
[2025-11-28 08:59:21] 2025-11-27 23:58:49,422 | INFO     | intersect: -3317581187.635791
[2025-11-28 08:59:21] 2025-11-27 23:58:49,423 | INFO     | chi2: 0.051123486839027725
[2025-11-28 08:59:21] 2025-11-27 23:58:49,423 | INFO     | current memory leak: 1.88 B/s (using 662 data points, chi2=0.05)
[2025-11-28 08:59:21] 2025-11-27 23:58:49,423 | INFO     | could have reported an average CPU frequency of 3606 MHz (26 samples)
[2025-11-28 08:59:21] 2025-11-27 23:58:49,423 | INFO     | ..............................
[2025-11-28 08:59:21] 2025-11-27 23:58:49,423 | INFO     | . Timing measurements:
[2025-11-28 08:59:21] 2025-11-27 23:58:49,423 | INFO     | . get job = 0 s
[2025-11-28 08:59:21] 2025-11-27 23:58:49,423 | INFO     | . initial setup = 7 s
[2025-11-28 08:59:21] 2025-11-27 23:58:49,423 | INFO     | . payload setup = 4 s
[2025-11-28 08:59:21] 2025-11-27 23:58:49,423 | INFO     | . stage-in = 0 s
[2025-11-28 08:59:21] 2025-11-27 23:58:49,423 | INFO     | . payload execution = 42870 s
[2025-11-28 08:59:21] 2025-11-27 23:58:49,424 | INFO     | . stage-out = 5 s
[2025-11-28 08:59:21] 2025-11-27 23:58:49,424 | INFO     | . log creation = 0 s
[2025-11-28 08:59:21] 2025-11-27 23:58:49,424 | INFO     | ..............................
[2025-11-28 08:59:21] 2025-11-27 23:58:49,744 | INFO     | 
[2025-11-28 08:59:21] 2025-11-27 23:58:49,744 | INFO     | job summary report
[2025-11-28 08:59:21] 2025-11-27 23:58:49,744 | INFO     | --------------------------------------------------
[2025-11-28 08:59:21] 2025-11-27 23:58:49,744 | INFO     | PanDA job id: 6896218920
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | task id: 47556149
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | errors: (none)
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | pilot state: finished 
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | transexitcode: 0
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | exeerrorcode: 0
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | exeerrordiag: 
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | exitcode: 0
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | exitmsg: OK
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | cpuconsumptiontime: 115742 s
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | nevents: 1000
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | neventsw: 0
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | pid: 1377689
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | pgrp: 1377689
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | corecount: 3
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | event service: False
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | sizes: {0: 2284315, 1: 2284315, 3: 2284605, 11: 2284633, 42879: 2329060, 42885: 2338054, 42888: 2338238, 42949: 2338484}
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | --------------------------------------------------
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | 
[2025-11-28 08:59:21] 2025-11-27 23:58:49,745 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-11-28 08:59:21] 2025-11-27 23:58:49,756 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,756 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,756 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,756 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,756 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,756 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,756 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,756 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,756 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,757 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,757 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,757 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,757 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,757 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,757 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,757 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,757 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,757 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 08:59:21] 2025-11-27 23:58:49,757 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,757 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 08:59:21] 2025-11-27 23:58:49,757 | INFO     | job 6896218920 has completed (purged errors)
[2025-11-28 08:59:21] 2025-11-27 23:58:49,757 | INFO     | overall cleanup function is called
[2025-11-28 08:59:21] 2025-11-27 23:58:50,766 | INFO     | --- collectZombieJob: --- 10, [1377689]
[2025-11-28 08:59:21] 2025-11-27 23:58:50,766 | INFO     | zombie collector waiting for pid 1377689
[2025-11-28 08:59:21] 2025-11-27 23:58:50,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 08:59:21] 2025-11-27 23:58:50,766 | INFO     | collected zombie processes
[2025-11-28 08:59:21] 2025-11-27 23:58:50,766 | INFO     | will attempt to kill all subprocesses of pid=1377689
[2025-11-28 08:59:21] 2025-11-27 23:58:50,798 | INFO     | process IDs to be killed: [1377689] (in reverse order)
[2025-11-28 08:59:21] 2025-11-27 23:58:50,817 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 08:59:21] 2025-11-27 23:58:50,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 08:59:21] 2025-11-27 23:58:50,818 | INFO     | did not find any defunct processes belonging to 1377689
[2025-11-28 08:59:21] 2025-11-27 23:58:50,819 | INFO     | did not find any defunct processes belonging to 1377689
[2025-11-28 08:59:21] 2025-11-27 23:58:50,820 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 08:59:21] 2025-11-27 23:58:50,820 | INFO     | ready for new job
[2025-11-28 08:59:21] 2025-11-27 23:58:50,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 08:59:21] 2025-11-27 23:58:50,822 | INFO     | ***************************************
[2025-11-28 08:59:21] 2025-11-27 23:58:50,822 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 08:59:21] 2025-11-27 23:58:50,822 | INFO     | ***************************************
[2025-11-28 08:59:21] 2025-11-27 23:58:50,822 | INFO     | 
[2025-11-28 08:59:21] 2025-11-27 23:58:50,822 | INFO     | architecture information:
[2025-11-28 08:59:21] 2025-11-27 23:58:50,822 | INFO     | executing command: cat /etc/os-release
[2025-11-28 08:59:21] 2025-11-27 23:58:50,830 | INFO     | cat /etc/os-release:
[2025-11-28 08:59:21] NAME="CentOS Linux"
[2025-11-28 08:59:21] VERSION="7 (Core)"
[2025-11-28 08:59:21] ID="centos"
[2025-11-28 08:59:21] ID_LIKE="rhel fedora"
[2025-11-28 08:59:21] VERSION_ID="7"
[2025-11-28 08:59:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 08:59:21] ANSI_COLOR="0;31"
[2025-11-28 08:59:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 08:59:21] HOME_URL="https://www.centos.org/"
[2025-11-28 08:59:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 08:59:21] 
[2025-11-28 08:59:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 08:59:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 08:59:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 08:59:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 08:59:21] 
[2025-11-28 08:59:21] 2025-11-27 23:58:50,830 | INFO     | ***************************************
[2025-11-28 08:59:21] 2025-11-27 23:58:51,332 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-11-28 08:59:21] 2025-11-27 23:58:51,340 | INFO     | sufficient remaining disk space (322962456576 B)
[2025-11-28 08:59:21] 2025-11-27 23:58:51,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 08:59:21] 2025-11-27 23:58:51,341 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 08:59:21] 2025-11-27 23:58:51,341 | INFO     | update_server=False
[2025-11-28 08:59:21] 2025-11-27 23:58:51,341 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 08:59:21] 2025-11-27 23:58:51,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:59:21] 2025-11-27 23:58:51,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 08:59:21] 2025-11-27 23:58:51,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:59:21] 2025-11-27 23:58:51,553 | INFO     | aborting loop
[2025-11-28 08:59:21] 2025-11-27 23:58:52,171 | INFO     | all data control threads have been joined
[2025-11-28 08:59:21] 2025-11-27 23:58:52,346 | INFO     | [job] retrieve thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:52,346 | INFO     | [job] queue monitor thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:52,411 | INFO     | all payload control threads have been joined
[2025-11-28 08:59:21] 2025-11-27 23:58:52,516 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:52,559 | INFO     | [job] job monitor thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:52,852 | INFO     | all job control threads have been joined
[2025-11-28 08:59:21] 2025-11-27 23:58:53,109 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 08:59:21] 2025-11-27 23:58:53,177 | INFO     | [data] control thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:53,198 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:53,233 | INFO     | [data] copytool_in thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:53,249 | INFO     | [job] validate thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:53,343 | INFO     | [data] copytool_out thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:53,417 | INFO     | [payload] control thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:53,582 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:53,624 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:53,787 | INFO     | [payload] validate_post thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:53,857 | INFO     | [payload] failed_post thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:53,857 | INFO     | [job] control thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:58:57,115 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 08:59:21] 2025-11-27 23:59:01,694 | INFO     | [monitor] cgroup control has ended
[2025-11-28 08:59:21] 2025-11-27 23:59:02,023 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140454343939904)>', '<ExcThread(monitor, started 140453978547968)>']
[2025-11-28 08:59:21] 2025-11-27 23:59:07,048 | INFO     | all workflow threads have been joined
[2025-11-28 08:59:21] 2025-11-27 23:59:07,048 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 08:59:21] 2025-11-27 23:59:07,048 | INFO     | traces error code: 0
[2025-11-28 08:59:21] 2025-11-27 23:59:07,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 08:59:21] 2025-11-27 23:59:20,374 | INFO     | 42969s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-28 08:59:21] 2025-11-27 23:59:21,416 | INFO     | PID=1371158 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 08:59:21] 2025-11-27 23:59:21,416 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 08:59:21] 2025-11-27 23:59:21,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 08:59:21] 2025-11-27 23:59:21,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 08:59:21] 2025-11-27 23:59:21,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 08:59:21] 2025-11-27 23:59:21,417 | INFO     | [monitor] control thread has ended
[2025-11-28 08:59:21] 2025-11-27 23:59:21,475 [wrapper] ==== pilot stdout END ====
[2025-11-28 08:59:21] 2025-11-27 23:59:21,476 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 08:59:21] 2025-11-27 23:59:21,478 [wrapper] pilotpid: 1371158
[2025-11-28 08:59:21] 2025-11-27 23:59:21,480 [wrapper] Pilot exit status: 0
[2025-11-28 08:59:21] 2025-11-27 23:59:21,485 [wrapper] pandaids: 6896218920
[2025-11-28 08:59:21] 2025-11-27 23:59:21,496 [wrapper] cleanup supervisor_pilot 1443905 1371159
[2025-11-28 08:59:21] 2025-11-27 23:59:21,497 [wrapper] Test setup, not cleaning
[2025-11-28 08:59:21] 2025-11-27 23:59:21,499 [wrapper] apfmon messages muted
[2025-11-28 08:59:21] 2025-11-27 23:59:21,501 [wrapper] ==== wrapper stdout END ====
[2025-11-28 08:59:21] 2025-11-27 23:59:21,502 [wrapper] ==== wrapper stderr END ====
[2025-11-28 08:59:21]  *** Error codes and diagnostics ***
[2025-11-28 08:59:21]     "exeErrorCode": 0,
[2025-11-28 08:59:21]     "exeErrorDiag": "",
[2025-11-28 08:59:21]     "pilotErrorCode": 0,
[2025-11-28 08:59:21]     "pilotErrorDiag": "",
[2025-11-28 08:59:21]  *** Listing of results directory ***
[2025-11-28 08:59:21] total 1307164
[2025-11-28 08:59:21] -rw-r--r--. 1 boinc boinc    576529 Nov 25 04:02 pilot3.tar.gz
[2025-11-28 08:59:21] -rw-r--r--. 1 boinc boinc      5112 Nov 25 04:46 queuedata.json
[2025-11-28 08:59:21] -rwx------. 1 boinc boinc     36292 Nov 25 04:46 runpilot2-wrapper.sh
[2025-11-28 08:59:21] -rw-r--r--. 1 boinc boinc       100 Nov 27 21:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 08:59:21] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 21:00 run_atlas
[2025-11-28 08:59:21] -rw-r--r--. 1 boinc boinc       105 Nov 27 21:00 job.xml
[2025-11-28 08:59:21] -rw-r--r--. 2 boinc boinc 408621800 Nov 27 21:00 EVNT.47483658._001408.pool.root.1
[2025-11-28 08:59:21] -rw-r--r--. 2 boinc boinc     15847 Nov 27 21:00 start_atlas.sh
[2025-11-28 08:59:21] drwxrwx--x. 2 boinc boinc        68 Nov 27 21:00 shared
[2025-11-28 08:59:21] -rw-r--r--. 2 boinc boinc    590099 Nov 27 21:00 input.tar.gz
[2025-11-28 08:59:21] -rw-r--r--. 1 boinc boinc         0 Nov 27 21:00 boinc_lockfile
[2025-11-28 08:59:21] -rw-r--r--. 1 boinc boinc      2786 Nov 27 21:01 pandaJob.out
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc    991572 Nov 27 21:02 agis_schedconf.cvmfs.json
[2025-11-28 08:59:21] drwx------. 5 boinc boinc      4096 Nov 27 21:02 pilot3
[2025-11-28 08:59:21] -rw-r--r--. 1 boinc boinc      9324 Nov 28 06:55 init_data.xml
[2025-11-28 08:59:21] -rw-r--r--. 1 boinc boinc       532 Nov 28 08:50 boinc_task_state.xml
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc 911667217 Nov 28 08:57 HITS.47556149._003950.pool.root.1
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc      1029 Nov 28 08:57 memory_monitor_summary.json
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc   1516240 Nov 28 08:57 agis_ddmendpoints.agis.ALL.json
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc   1332401 Nov 28 08:57 log.47556149._003950.job.log.tgz.1
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc        95 Nov 28 08:58 pilot_heartbeat.json
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc      8598 Nov 28 08:58 heartbeat.json
[2025-11-28 08:59:21] -rw-r--r--. 1 boinc boinc      8192 Nov 28 08:59 boinc_mmap_file
[2025-11-28 08:59:21] -rw-r--r--. 1 boinc boinc        29 Nov 28 08:59 wrapper_checkpoint.txt
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc       863 Nov 28 08:59 pilotlog.txt
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc   5837348 Nov 28 08:59 log.47556149._003950.job.log.1
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc       353 Nov 28 08:59 output.list
[2025-11-28 08:59:21] -rw-r--r--. 1 boinc boinc       620 Nov 28 08:59 runtime_log
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc   7188480 Nov 28 08:59 result.tar.gz
[2025-11-28 08:59:21] -rw-r--r--. 1 boinc boinc      8776 Nov 28 08:59 runtime_log.err
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc       653 Nov 28 08:59 HLtNDmGhrh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVtLKDmHcLFen.diag
[2025-11-28 08:59:21] -rw-r--r--. 1 boinc boinc     20834 Nov 28 08:59 stderr.txt
[2025-11-28 08:59:21] HITS file was successfully produced:
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc 911667217 Nov 28 08:57 shared/HITS.pool.root.1
[2025-11-28 08:59:21]  *** Contents of shared directory: ***
[2025-11-28 08:59:21] total 1296968
[2025-11-28 08:59:21] -rw-r--r--. 2 boinc boinc 408621800 Nov 27 21:00 ATLAS.root_0
[2025-11-28 08:59:21] -rw-r--r--. 2 boinc boinc     15847 Nov 27 21:00 start_atlas.sh
[2025-11-28 08:59:21] -rw-r--r--. 2 boinc boinc    590099 Nov 27 21:00 input.tar.gz
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc 911667217 Nov 28 08:57 HITS.pool.root.1
[2025-11-28 08:59:21] -rw-------. 1 boinc boinc   7188480 Nov 28 08:59 result.tar.gz
08:59:23 (1366885): run_atlas exited; CPU time 115774.367988
08:59:23 (1366885): called boinc_finish(0)

</stderr_txt>
]]>

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