Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:39 (618116): wrapper (7.7.26015): starting
13:59:39 (618116): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 13:59:39] Arguments: --nthreads 8
[2025-11-25 13:59:39] Threads: 8
[2025-11-25 13:59:39] Checking for CVMFS
[2025-11-25 13:59:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 13:59:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 13:59:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 13:59:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 13:59:40] 2.13.3.0 11900 29002 401352 153293 3 402 23911225 32935937 35307 16776704 0 154337399 99.513 191399807 34095 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 13:59:40] CVMFS is ok
[2025-11-25 13:59:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:59:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:59:40] Further information can be found at the LHC@home message board.
[2025-11-25 13:59:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:59:40] Checking for apptainer binary...
[2025-11-25 13:59:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 13:59:40] Running /usr/bin/apptainer --version
[2025-11-25 13:59:41] apptainer version 1.4.4-1.el9
[2025-11-25 13:59:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:59:41] c6-12-27-1.aglt2.org
[2025-11-25 13:59:41] apptainer works
[2025-11-25 13:59:41] Set ATHENA_PROC_NUMBER=8
[2025-11-25 13:59:41] Set ATHENA_CORE_NUMBER=8
[2025-11-25 13:59:41] Starting ATLAS job with PandaID=6895417692
[2025-11-25 13:59:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:48:33 (731248): wrapper (7.7.26015): starting
05:48:33 (731248): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 05:48:33] Arguments: --nthreads 9
[2025-11-26 05:48:33] Threads: 9
[2025-11-26 05:48:33] This job has been restarted, cleaning up previous attempt
[2025-11-26 05:48:33] Checking for CVMFS
[2025-11-26 05:48:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 05:48:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 05:48:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 05:48:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 05:48:33] 2.13.3.0 11900 29951 384292 153318 0 294 28963208 32935937 33552 16776704 0 160350867 99.510 198371356 33911 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 05:48:33] CVMFS is ok
[2025-11-26 05:48:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 05:48:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 05:48:33] Further information can be found at the LHC@home message board.
[2025-11-26 05:48:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 05:48:33] Checking for apptainer binary...
[2025-11-26 05:48:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 05:48:33] Running /usr/bin/apptainer --version
[2025-11-26 05:48:33] apptainer version 1.4.4-1.el9
[2025-11-26 05:48:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 05:48:33] c6-12-27-1.aglt2.org
[2025-11-26 05:48:33] apptainer works
[2025-11-26 05:48:34] Set ATHENA_PROC_NUMBER=9
[2025-11-26 05:48:34] Set ATHENA_CORE_NUMBER=9
[2025-11-26 05:48:34] Starting ATLAS job with PandaID=6895417692
[2025-11-26 05:48:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:40:09 (731248): BOINC client no longer exists - exiting
07:40:09 (731248): timer handler: client dead, exiting
07:48:09 (1249032): wrapper (7.7.26015): starting
07:48:09 (1249032): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 07:48:09] Arguments: --nthreads 8
[2025-11-26 07:48:09] Threads: 8
[2025-11-26 07:48:09] This job has been restarted, cleaning up previous attempt
[2025-11-26 07:48:09] Checking for CVMFS
[2025-11-26 07:48:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 07:48:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 07:48:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 07:48:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 07:48:10] 2.13.3.0 11900 30070 396584 153322 1 668 30817014 32935937 33081 16776704 0 161141885 99.511 198929568 33882 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 07:48:10] CVMFS is ok
[2025-11-26 07:48:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 07:48:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 07:48:10] Further information can be found at the LHC@home message board.
[2025-11-26 07:48:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 07:48:10] Checking for apptainer binary...
[2025-11-26 07:48:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 07:48:10] Running /usr/bin/apptainer --version
[2025-11-26 07:48:10] apptainer version 1.4.4-1.el9
[2025-11-26 07:48:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 07:48:10] c6-12-27-1.aglt2.org
[2025-11-26 07:48:10] apptainer works
[2025-11-26 07:48:10] Set ATHENA_PROC_NUMBER=8
[2025-11-26 07:48:10] Set ATHENA_CORE_NUMBER=8
[2025-11-26 07:48:10] Starting ATLAS job with PandaID=6895417692
[2025-11-26 07:48:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:58:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:58:04] 2025-11-27 11:56:57,279 | INFO     | monitor loop #4406: job 0:6895417692 is in state 'finished'
[2025-11-27 06:58:04] 2025-11-27 11:56:57,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:58:04] 2025-11-27 11:56:58,974 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 06:58:04] 2025-11-27 11:56:59,002 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2668.2519791666655
[2025-11-27 06:58:04] 2025-11-27 11:56:59,021 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895417692/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:58:04] 2025-11-27 11:56:59,033 | INFO     | extracted standard info from prmon json
[2025-11-27 06:58:04] 2025-11-27 11:56:59,033 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:58:04] 2025-11-27 11:56:59,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:58:04] 2025-11-27 11:56:59,043 | INFO     | time since job start (83316s) is within the limit (172800.0s)
[2025-11-27 06:58:04] 2025-11-27 11:56:59,134 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:58:04] 2025-11-27 11:56:59,136 | INFO     | sum of square deviations: 788676414300.2949
[2025-11-27 06:58:04] 2025-11-27 11:56:59,176 | INFO     | sum of deviations: 3590581008865.585
[2025-11-27 06:58:04] 2025-11-27 11:56:59,176 | INFO     | mean x: 1764202941.8893774
[2025-11-27 06:58:04] 2025-11-27 11:56:59,177 | INFO     | mean y: 2922336.778754579
[2025-11-27 06:58:04] 2025-11-27 11:56:59,177 | INFO     | intersect: -8028906007.616082
[2025-11-27 06:58:04] 2025-11-27 11:56:59,178 | INFO     | chi2: 9.465915424835194
[2025-11-27 06:58:04] 2025-11-27 11:56:59,180 | INFO     | sum of square deviations: 780042999468.3994
[2025-11-27 06:58:04] 2025-11-27 11:56:59,219 | INFO     | sum of deviations: 4076637865630.1978
[2025-11-27 06:58:04] 2025-11-27 11:56:59,219 | INFO     | mean x: 1764202789.4
[2025-11-27 06:58:04] 2025-11-27 11:56:59,219 | INFO     | mean y: 2930921.4095588233
[2025-11-27 06:58:04] 2025-11-27 11:56:59,220 | INFO     | intersect: -9217093998.780518
[2025-11-27 06:58:04] 2025-11-27 11:56:59,221 | INFO     | chi2: 6.018007147126545
[2025-11-27 06:58:04] 2025-11-27 11:56:59,222 | INFO     | current chi2=6.018007147126545 (change=36.42445683237951 %)
[2025-11-27 06:58:04] 2025-11-27 11:56:59,223 | INFO     | sum of square deviations: 771472758925.0157
[2025-11-27 06:58:04] 2025-11-27 11:56:59,261 | INFO     | sum of deviations: 4494429330735.692
[2025-11-27 06:58:04] 2025-11-27 11:56:59,262 | INFO     | mean x: 1764202636.9099631
[2025-11-27 06:58:04] 2025-11-27 11:56:59,262 | INFO     | mean y: 2938350.112177122
[2025-11-27 06:58:04] 2025-11-27 11:56:59,262 | INFO     | intersect: -10274915255.163427
[2025-11-27 06:58:04] 2025-11-27 11:56:59,264 | INFO     | chi2: 3.158869734689128
[2025-11-27 06:58:04] 2025-11-27 11:56:59,264 | INFO     | current chi2=3.158869734689128 (change=47.50970450080949 %)
[2025-11-27 06:58:04] 2025-11-27 11:56:59,266 | INFO     | sum of square deviations: 762965460410.6993
[2025-11-27 06:58:04] 2025-11-27 11:56:59,304 | INFO     | sum of deviations: 4655503939367.038
[2025-11-27 06:58:04] 2025-11-27 11:56:59,304 | INFO     | mean x: 1764202484.4192593
[2025-11-27 06:58:04] 2025-11-27 11:56:59,304 | INFO     | mean y: 2941235.6288888888
[2025-11-27 06:58:04] 2025-11-27 11:56:59,304 | INFO     | intersect: -10761964965.542835
[2025-11-27 06:58:04] 2025-11-27 11:56:59,306 | INFO     | chi2: 2.6112759134607684
[2025-11-27 06:58:04] 2025-11-27 11:56:59,306 | INFO     | current chi2=2.6112759134607684 (change=17.335118799454058 %)
[2025-11-27 06:58:04] 2025-11-27 11:56:59,306 | INFO     | right removable region: 1349
[2025-11-27 06:58:04] 2025-11-27 11:56:59,308 | INFO     | sum of square deviations: 780040759677.9967
[2025-11-27 06:58:04] 2025-11-27 11:56:59,418 | INFO     | sum of deviations: 3216075630213.4663
[2025-11-27 06:58:04] 2025-11-27 11:56:59,422 | INFO     | mean x: 1764203094.3985295
[2025-11-27 06:58:04] 2025-11-27 11:56:59,422 | INFO     | mean y: 2928944.7352941176
[2025-11-27 06:58:04] 2025-11-27 11:56:59,423 | INFO     | intersect: -7270807085.397882
[2025-11-27 06:58:04] 2025-11-27 11:56:59,424 | INFO     | chi2: 7.358734608479421
[2025-11-27 06:58:04] 2025-11-27 11:56:59,424 | INFO     | current chi2=7.358734608479421 (change=22.260718818882328 %)
[2025-11-27 06:58:04] 2025-11-27 11:56:59,424 | INFO     | left removable region: 10
[2025-11-27 06:58:04] 2025-11-27 11:56:59,426 | INFO     | sum of square deviations: 744466559466.8164
[2025-11-27 06:58:04] 2025-11-27 11:56:59,523 | INFO     | sum of deviations: 4154015827834.676
[2025-11-27 06:58:04] 2025-11-27 11:56:59,524 | INFO     | mean x: 1764202758.9320388
[2025-11-27 06:58:04] 2025-11-27 11:56:59,524 | INFO     | mean y: 2950298.7326362957
[2025-11-27 06:58:04] 2025-11-27 11:56:59,524 | INFO     | intersect: -9841046172.192734
[2025-11-27 06:58:04] 2025-11-27 11:56:59,526 | INFO     | chi2: 0.36542983226337805
[2025-11-27 06:58:04] 2025-11-27 11:56:59,526 | INFO     | current memory leak: 5.58 B/s (using 1339 data points, chi2=0.37)
[2025-11-27 06:58:04] 2025-11-27 11:56:59,527 | INFO     | could have reported an average CPU frequency of 2664 MHz (49 samples)
[2025-11-27 06:58:04] 2025-11-27 11:56:59,527 | INFO     | ..............................
[2025-11-27 06:58:04] 2025-11-27 11:56:59,528 | INFO     | . Timing measurements:
[2025-11-27 06:58:04] 2025-11-27 11:56:59,528 | INFO     | . get job = 0 s
[2025-11-27 06:58:04] 2025-11-27 11:56:59,528 | INFO     | . initial setup = 1 s
[2025-11-27 06:58:04] 2025-11-27 11:56:59,528 | INFO     | . payload setup = 7 s
[2025-11-27 06:58:04] 2025-11-27 11:56:59,528 | INFO     | . stage-in = 0 s
[2025-11-27 06:58:04] 2025-11-27 11:56:59,528 | INFO     | . payload execution = 83257 s
[2025-11-27 06:58:04] 2025-11-27 11:56:59,528 | INFO     | . stage-out = 6 s
[2025-11-27 06:58:04] 2025-11-27 11:56:59,528 | INFO     | . log creation = 2 s
[2025-11-27 06:58:04] 2025-11-27 11:56:59,553 | INFO     | ..............................
[2025-11-27 06:58:04] 2025-11-27 11:56:59,850 | INFO     | 
[2025-11-27 06:58:04] 2025-11-27 11:56:59,851 | INFO     | job summary report
[2025-11-27 06:58:04] 2025-11-27 11:56:59,851 | INFO     | --------------------------------------------------
[2025-11-27 06:58:04] 2025-11-27 11:56:59,851 | INFO     | PanDA job id: 6895417692
[2025-11-27 06:58:04] 2025-11-27 11:56:59,851 | INFO     | task id: 47556149
[2025-11-27 06:58:04] 2025-11-27 11:56:59,851 | INFO     | errors: (none)
[2025-11-27 06:58:04] 2025-11-27 11:56:59,851 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:58:04] 2025-11-27 11:56:59,851 | INFO     | pilot state: finished 
[2025-11-27 06:58:04] 2025-11-27 11:56:59,851 | INFO     | transexitcode: 0
[2025-11-27 06:58:04] 2025-11-27 11:56:59,851 | INFO     | exeerrorcode: 0
[2025-11-27 06:58:04] 2025-11-27 11:56:59,851 | INFO     | exeerrordiag: 
[2025-11-27 06:58:04] 2025-11-27 11:56:59,851 | INFO     | exitcode: 0
[2025-11-27 06:58:04] 2025-11-27 11:56:59,851 | INFO     | exitmsg: OK
[2025-11-27 06:58:04] 2025-11-27 11:56:59,851 | INFO     | cpuconsumptiontime: 269408 s
[2025-11-27 06:58:04] 2025-11-27 11:56:59,852 | INFO     | nevents: 1000
[2025-11-27 06:58:04] 2025-11-27 11:56:59,852 | INFO     | neventsw: 0
[2025-11-27 06:58:04] 2025-11-27 11:56:59,852 | INFO     | pid: 1309744
[2025-11-27 06:58:04] 2025-11-27 11:56:59,852 | INFO     | pgrp: 1309744
[2025-11-27 06:58:04] 2025-11-27 11:56:59,852 | INFO     | corecount: 8
[2025-11-27 06:58:04] 2025-11-27 11:56:59,852 | INFO     | event service: False
[2025-11-27 06:58:04] 2025-11-27 11:56:59,852 | INFO     | sizes: {0: 2284093, 1: 2284292, 6: 2284554, 12: 2284582, 83270: 2347214, 83278: 2356208, 83279: 2356392, 83300: 2356638}
[2025-11-27 06:58:04] 2025-11-27 11:56:59,852 | INFO     | --------------------------------------------------
[2025-11-27 06:58:04] 2025-11-27 11:56:59,852 | INFO     | 
[2025-11-27 06:58:04] 2025-11-27 11:56:59,852 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 06:58:04] 2025-11-27 11:56:59,917 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,917 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,919 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:58:04] 2025-11-27 11:56:59,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,919 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:56:59,919 | INFO     | job 6895417692 has completed (purged errors)
[2025-11-27 06:58:04] 2025-11-27 11:56:59,919 | INFO     | overall cleanup function is called
[2025-11-27 06:58:04] 2025-11-27 11:57:00,946 | INFO     | --- collectZombieJob: --- 10, [1309744]
[2025-11-27 06:58:04] 2025-11-27 11:57:00,946 | INFO     | zombie collector waiting for pid 1309744
[2025-11-27 06:58:04] 2025-11-27 11:57:00,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:58:04] 2025-11-27 11:57:00,947 | INFO     | collected zombie processes
[2025-11-27 06:58:04] 2025-11-27 11:57:00,947 | INFO     | will attempt to kill all subprocesses of pid=1309744
[2025-11-27 06:58:04] 2025-11-27 11:57:01,942 | INFO     | process IDs to be killed: [1309744] (in reverse order)
[2025-11-27 06:58:04] 2025-11-27 11:57:02,349 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:58:04] 2025-11-27 11:57:02,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:58:04] 2025-11-27 11:57:02,374 | INFO     | did not find any defunct processes belonging to 1309744
[2025-11-27 06:58:04] 2025-11-27 11:57:02,421 | INFO     | did not find any defunct processes belonging to 1309744
[2025-11-27 06:58:04] 2025-11-27 11:57:02,422 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:58:04] 2025-11-27 11:57:02,422 | INFO     | ready for new job
[2025-11-27 06:58:04] 2025-11-27 11:57:02,422 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:58:04] 2025-11-27 11:57:02,428 | INFO     | ***************************************
[2025-11-27 06:58:04] 2025-11-27 11:57:02,429 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:58:04] 2025-11-27 11:57:02,429 | INFO     | ***************************************
[2025-11-27 06:58:04] 2025-11-27 11:57:02,429 | INFO     | 
[2025-11-27 06:58:04] 2025-11-27 11:57:02,435 | INFO     | architecture information:
[2025-11-27 06:58:04] 2025-11-27 11:57:02,435 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:58:04] 2025-11-27 11:57:02,511 | INFO     | cat /etc/os-release:
[2025-11-27 06:58:04] NAME="CentOS Linux"
[2025-11-27 06:58:04] VERSION="7 (Core)"
[2025-11-27 06:58:04] ID="centos"
[2025-11-27 06:58:04] ID_LIKE="rhel fedora"
[2025-11-27 06:58:04] VERSION_ID="7"
[2025-11-27 06:58:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:58:04] ANSI_COLOR="0;31"
[2025-11-27 06:58:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:58:04] HOME_URL="https://www.centos.org/"
[2025-11-27 06:58:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:58:04] 
[2025-11-27 06:58:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:58:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:58:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:58:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:58:04] 
[2025-11-27 06:58:04] 2025-11-27 11:57:02,512 | INFO     | ***************************************
[2025-11-27 06:58:04] 2025-11-27 11:57:03,017 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 06:58:04] 2025-11-27 11:57:03,102 | INFO     | sufficient remaining disk space (87438655488 B)
[2025-11-27 06:58:04] 2025-11-27 11:57:03,102 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:58:04] 2025-11-27 11:57:03,102 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:58:04] 2025-11-27 11:57:03,102 | INFO     | update_server=False
[2025-11-27 06:58:04] 2025-11-27 11:57:03,102 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:58:04] 2025-11-27 11:57:03,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:58:04] 2025-11-27 11:57:03,317 | INFO     | aborting loop
[2025-11-27 06:58:04] 2025-11-27 11:57:03,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:58:04] 2025-11-27 11:57:03,693 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:58:04] 2025-11-27 11:57:03,916 | INFO     | all data control threads have been joined
[2025-11-27 06:58:04] 2025-11-27 11:57:03,957 | INFO     | all payload control threads have been joined
[2025-11-27 06:58:04] 2025-11-27 11:57:04,108 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:04,184 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:04,298 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:04,306 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:04,327 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:04,602 | INFO     | all job control threads have been joined
[2025-11-27 06:58:04] 2025-11-27 11:57:04,815 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:04,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:58:04] 2025-11-27 11:57:04,925 | INFO     | [data] control thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:04,935 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:04,936 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:04,963 | INFO     | [payload] control thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:04,998 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:05,485 | INFO     | [job] validate thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:05,609 | INFO     | [job] control thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:05,699 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:05,887 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:07,349 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:33,058 | INFO     | PID=1271481 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 06:58:04] 2025-11-27 11:57:33,059 | INFO     | .. there are 59 such processes running
[2025-11-27 06:58:04] 2025-11-27 11:57:33,059 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:58:04] 2025-11-27 11:57:33,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:58:04] 2025-11-27 11:57:33,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:58:04] 2025-11-27 11:57:57,291 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:58:04] 2025-11-27 11:57:57,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140166321272640)>', '<ExcThread(monitor, started 140165838264064)>']
[2025-11-27 06:58:04] 2025-11-27 11:57:58,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:58:04] 2025-11-27 11:57:58,207 | INFO     | [monitor] control thread has ended
[2025-11-27 06:58:04] 2025-11-27 11:58:02,891 | INFO     | all workflow threads have been joined
[2025-11-27 06:58:04] 2025-11-27 11:58:02,913 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:58:04] 2025-11-27 11:58:02,914 | INFO     | traces error code: 0
[2025-11-27 06:58:04] 2025-11-27 11:58:02,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:58:04] 2025-11-27 11:58:03,547 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:58:04] 2025-11-27 11:58:03,557 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:58:04] 2025-11-27 11:58:03,572 [wrapper] pilotpid: 1271481
[2025-11-27 06:58:04] 2025-11-27 11:58:03,603 [wrapper] Pilot exit status: 0
[2025-11-27 06:58:04] 2025-11-27 11:58:03,738 [wrapper] pandaids: 6895417692 6895417692 6895417692
[2025-11-27 06:58:04] 2025-11-27 11:58:04,047 [wrapper] cleanup supervisor_pilot  165569 1271482
[2025-11-27 06:58:04] 2025-11-27 11:58:04,060 [wrapper] Test setup, not cleaning
[2025-11-27 06:58:04] 2025-11-27 11:58:04,073 [wrapper] apfmon messages muted
[2025-11-27 06:58:04] 2025-11-27 11:58:04,086 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:58:04] 2025-11-27 11:58:04,096 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:58:04]  *** Error codes and diagnostics ***
[2025-11-27 06:58:04]     "exeErrorCode": 0,
[2025-11-27 06:58:04]     "exeErrorDiag": "",
[2025-11-27 06:58:04]     "pilotErrorCode": 0,
[2025-11-27 06:58:04]     "pilotErrorDiag": "",
[2025-11-27 06:58:04]  *** Listing of results directory ***
[2025-11-27 06:58:04] total 1728996
[2025-11-27 06:58:04] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 02:53 pilot3.tar.gz
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 03:11 queuedata.json
[2025-11-27 06:58:04] -rwx------. 1 boincer umatlas     36292 Nov 24 03:12 runpilot2-wrapper.sh
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas       100 Nov 25 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:58:04] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 13:59 run_atlas
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas       105 Nov 25 13:59 job.xml
[2025-11-27 06:58:04] -rw-r--r--. 3 boincer umatlas 411142601 Nov 25 13:59 EVNT.47483658._001271.pool.root.1
[2025-11-27 06:58:04] -rw-r--r--. 3 boincer umatlas 411142601 Nov 25 13:59 ATLAS.root_0
[2025-11-27 06:58:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 13:59 start_atlas.sh
[2025-11-27 06:58:04] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 13:59 shared
[2025-11-27 06:58:04] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 13:59 input.tar.gz
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas         0 Nov 25 13:59 boinc_lockfile
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 07:48 pandaJob.out
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas        57 Nov 26 07:48 setup.sh.local
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas    991830 Nov 26 07:48 agis_schedconf.cvmfs.json
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas       534 Nov 27 06:40 boinc_task_state.xml
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas      6882 Nov 27 06:55 init_data.xml
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas 920159546 Nov 27 06:55 HITS.47556149._002576.pool.root.1
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas      1070 Nov 27 06:56 memory_monitor_summary.json
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas   1516240 Nov 27 06:56 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas   2341764 Nov 27 06:56 log.47556149._002576.job.log.tgz.1
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas      8641 Nov 27 06:56 heartbeat.json
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas        96 Nov 27 06:57 pilot_heartbeat.json
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 06:57 boinc_mmap_file
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas        30 Nov 27 06:57 wrapper_checkpoint.txt
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas      4824 Nov 27 06:58 pilotlog.txt
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas   9715994 Nov 27 06:58 log.47556149._002576.job.log.1
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas       353 Nov 27 06:58 output.list
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas       620 Nov 27 06:58 runtime_log
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas  12072960 Nov 27 06:58 result.tar.gz
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas       916 Nov 27 06:58 w1nMDmprgh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbXLKDmh9o1Zn.diag
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas      9438 Nov 27 06:58 runtime_log.err
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas     25787 Nov 27 06:58 stderr.txt
[2025-11-27 06:58:04] HITS file was successfully produced:
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas 920159546 Nov 27 06:55 shared/HITS.pool.root.1
[2025-11-27 06:58:04]  *** Contents of shared directory: ***
[2025-11-27 06:58:04] total 1312500
[2025-11-27 06:58:04] -rw-r--r--. 3 boincer umatlas 411142601 Nov 25 13:59 ATLAS.root_0
[2025-11-27 06:58:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 13:59 start_atlas.sh
[2025-11-27 06:58:04] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 13:59 input.tar.gz
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas 920159546 Nov 27 06:55 HITS.pool.root.1
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas  12072960 Nov 27 06:58 result.tar.gz
06:58:06 (1249032): run_atlas exited; CPU time 272932.434268
06:58:06 (1249032): called boinc_finish(0)

</stderr_txt>
]]>

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