Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:41:04 (2396176): wrapper (7.7.26015): starting
16:41:04 (2396176): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 16:41:04] Arguments: --nthreads 8
[2025-11-25 16:41:04] Threads: 8
[2025-11-25 16:41:04] Checking for CVMFS
[2025-11-25 16:41:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 16:41:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 16:41:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 16:41:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 16:41:05] 2.13.3.0 11226 27465 339912 153298 1 277 30125012 32935936 19648 16776704 0 63365162 99.487 86891463 40416 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 16:41:05] CVMFS is ok
[2025-11-25 16:41:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 16:41:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 16:41:05] Further information can be found at the LHC@home message board.
[2025-11-25 16:41:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 16:41:05] Checking for apptainer binary...
[2025-11-25 16:41:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 16:41:05] Running /usr/bin/apptainer --version
[2025-11-25 16:41:06] apptainer version 1.4.4-1.el9
[2025-11-25 16:41:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 16:41:06] c6-2-29-3.aglt2.org
[2025-11-25 16:41:06] apptainer works
[2025-11-25 16:41:06] Set ATHENA_PROC_NUMBER=8
[2025-11-25 16:41:06] Set ATHENA_CORE_NUMBER=8
[2025-11-25 16:41:06] Starting ATLAS job with PandaID=6896219309
[2025-11-25 16:41:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:02:02]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:02:02] 2025-11-26 12:01:27,561 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:02:02] 2025-11-26 12:01:27,562 | INFO     | sum of square deviations: 186431524175.7916
[2025-11-26 07:02:02] 2025-11-26 12:01:27,588 | INFO     | sum of deviations: 1614250447569.563
[2025-11-26 07:02:02] 2025-11-26 12:01:27,588 | INFO     | mean x: 1764132760.592417
[2025-11-26 07:02:02] 2025-11-26 12:01:27,588 | INFO     | mean y: 2935756.5568720377
[2025-11-26 07:02:02] 2025-11-26 12:01:27,589 | INFO     | intersect: -15272120921.482252
[2025-11-26 07:02:02] 2025-11-26 12:01:27,602 | INFO     | chi2: 9.217328897761123
[2025-11-26 07:02:02] 2025-11-26 12:01:27,603 | INFO     | sum of square deviations: 183138143624.7889
[2025-11-26 07:02:02] 2025-11-26 12:01:27,632 | INFO     | sum of deviations: 1906085562991.451
[2025-11-26 07:02:02] 2025-11-26 12:01:27,632 | INFO     | mean x: 1764132608.0989273
[2025-11-26 07:02:02] 2025-11-26 12:01:27,632 | INFO     | mean y: 2949268.054827175
[2025-11-26 07:02:02] 2025-11-26 12:01:27,632 | INFO     | intersect: -18357986520.335857
[2025-11-26 07:02:02] 2025-11-26 12:01:27,639 | INFO     | chi2: 5.991928073045558
[2025-11-26 07:02:02] 2025-11-26 12:01:27,639 | INFO     | current chi2=5.991928073045558 (change=34.992793036809296 %)
[2025-11-26 07:02:02] 2025-11-26 12:01:27,640 | INFO     | sum of square deviations: 179883787061.21426
[2025-11-26 07:02:02] 2025-11-26 12:01:27,668 | INFO     | sum of deviations: 2077836328256.7124
[2025-11-26 07:02:02] 2025-11-26 12:01:27,669 | INFO     | mean x: 1764132455.6055155
[2025-11-26 07:02:02] 2025-11-26 12:01:27,669 | INFO     | mean y: 2957302.236211031
[2025-11-26 07:02:02] 2025-11-26 12:01:27,669 | INFO     | intersect: -20374523981.646645
[2025-11-26 07:02:02] 2025-11-26 12:01:27,674 | INFO     | chi2: 4.452860393281807
[2025-11-26 07:02:02] 2025-11-26 12:01:27,674 | INFO     | current chi2=4.452860393281807 (change=25.685683489546264 %)
[2025-11-26 07:02:02] 2025-11-26 12:01:27,675 | INFO     | sum of square deviations: 176668171293.78967
[2025-11-26 07:02:02] 2025-11-26 12:01:27,700 | INFO     | sum of deviations: 2059576128773.5593
[2025-11-26 07:02:02] 2025-11-26 12:01:27,700 | INFO     | mean x: 1764132303.1109772
[2025-11-26 07:02:02] 2025-11-26 12:01:27,700 | INFO     | mean y: 2956434.015681544
[2025-11-26 07:02:02] 2025-11-26 12:01:27,700 | INFO     | intersect: -20563084142.945965
[2025-11-26 07:02:02] 2025-11-26 12:01:27,701 | INFO     | chi2: 4.4340660196001425
[2025-11-26 07:02:02] 2025-11-26 12:01:27,701 | INFO     | current chi2=4.4340660196001425 (change=0.4220741730421344 %)
[2025-11-26 07:02:02] 2025-11-26 12:01:27,701 | INFO     | right removable region: 828
[2025-11-26 07:02:02] 2025-11-26 12:01:27,706 | INFO     | sum of square deviations: 183137581204.78897
[2025-11-26 07:02:02] 2025-11-26 12:01:27,731 | INFO     | sum of deviations: 1287419097317.8015
[2025-11-26 07:02:02] 2025-11-26 12:01:27,731 | INFO     | mean x: 1764132913.0989273
[2025-11-26 07:02:02] 2025-11-26 12:01:27,731 | INFO     | mean y: 2950885.0023837904
[2025-11-26 07:02:02] 2025-11-26 12:01:27,731 | INFO     | intersect: -12398536497.26656
[2025-11-26 07:02:02] 2025-11-26 12:01:27,732 | INFO     | chi2: 5.532009273454773
[2025-11-26 07:02:02] 2025-11-26 12:01:27,733 | INFO     | current chi2=5.532009273454773 (change=39.982511909730256 %)
[2025-11-26 07:02:02] 2025-11-26 12:01:27,734 | INFO     | sum of square deviations: 179882815515.83688
[2025-11-26 07:02:02] 2025-11-26 12:01:27,758 | INFO     | sum of deviations: 1163785922679.6265
[2025-11-26 07:02:02] 2025-11-26 12:01:27,759 | INFO     | mean x: 1764133065.6019185
[2025-11-26 07:02:02] 2025-11-26 12:01:27,759 | INFO     | mean y: 2956667.2338129496
[2025-11-26 07:02:02] 2025-11-26 12:01:27,759 | INFO     | intersect: -11410436110.690626
[2025-11-26 07:02:02] 2025-11-26 12:01:27,760 | INFO     | chi2: 4.937262744405811
[2025-11-26 07:02:02] 2025-11-26 12:01:27,764 | INFO     | current chi2=4.937262744405811 (change=10.751003833323999 %)
[2025-11-26 07:02:02] 2025-11-26 12:01:27,764 | INFO     | left removable region: 20
[2025-11-26 07:02:02] 2025-11-26 12:01:27,765 | INFO     | sum of square deviations: 163579454961.62357
[2025-11-26 07:02:02] 2025-11-26 12:01:27,789 | INFO     | sum of deviations: 1529237861036.395
[2025-11-26 07:02:02] 2025-11-26 12:01:27,789 | INFO     | mean x: 1764132882.6237624
[2025-11-26 07:02:02] 2025-11-26 12:01:27,789 | INFO     | mean y: 2981577.7710396037
[2025-11-26 07:02:02] 2025-11-26 12:01:27,789 | INFO     | intersect: -16489179963.178236
[2025-11-26 07:02:02] 2025-11-26 12:01:27,790 | INFO     | chi2: 0.06054899622398261
[2025-11-26 07:02:02] 2025-11-26 12:01:27,790 | INFO     | current memory leak: 9.35 B/s (using 808 data points, chi2=0.06)
[2025-11-26 07:02:02] 2025-11-26 12:01:27,792 | INFO     | could have reported an average CPU frequency of 3010 MHz (32 samples)
[2025-11-26 07:02:02] 2025-11-26 12:01:27,796 | INFO     | ..............................
[2025-11-26 07:02:02] 2025-11-26 12:01:27,796 | INFO     | . Timing measurements:
[2025-11-26 07:02:02] 2025-11-26 12:01:27,796 | INFO     | . get job = 0 s
[2025-11-26 07:02:02] 2025-11-26 12:01:27,796 | INFO     | . initial setup = 4 s
[2025-11-26 07:02:02] 2025-11-26 12:01:27,796 | INFO     | . payload setup = 37 s
[2025-11-26 07:02:02] 2025-11-26 12:01:27,796 | INFO     | . stage-in = 0 s
[2025-11-26 07:02:02] 2025-11-26 12:01:27,797 | INFO     | . payload execution = 51451 s
[2025-11-26 07:02:02] 2025-11-26 12:01:27,797 | INFO     | . stage-out = 5 s
[2025-11-26 07:02:02] 2025-11-26 12:01:27,797 | INFO     | . log creation = 0 s
[2025-11-26 07:02:02] 2025-11-26 12:01:27,797 | INFO     | ..............................
[2025-11-26 07:02:02] 2025-11-26 12:01:28,146 | INFO     | time since job start (51564s) is within the limit (172800.0s)
[2025-11-26 07:02:02] 2025-11-26 12:01:28,456 | INFO     | 
[2025-11-26 07:02:02] 2025-11-26 12:01:28,456 | INFO     | job summary report
[2025-11-26 07:02:02] 2025-11-26 12:01:28,456 | INFO     | --------------------------------------------------
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | PanDA job id: 6896219309
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | task id: 47556149
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | errors: (none)
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | pilot state: finished 
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | transexitcode: 0
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | exeerrorcode: 0
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | exeerrordiag: 
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | exitcode: 0
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | exitmsg: OK
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | cpuconsumptiontime: 224691 s
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | nevents: 1000
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | neventsw: 0
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | pid: 2410572
[2025-11-26 07:02:02] 2025-11-26 12:01:28,457 | INFO     | pgrp: 2410572
[2025-11-26 07:02:02] 2025-11-26 12:01:28,458 | INFO     | corecount: 8
[2025-11-26 07:02:02] 2025-11-26 12:01:28,458 | INFO     | event service: False
[2025-11-26 07:02:02] 2025-11-26 12:01:28,458 | INFO     | sizes: {0: 2283487, 1: 2284343, 2: 2284343, 13: 2284371, 23: 2284427, 29: 2284717, 34: 2284873, 51490: 2334495, 51495: 2343489, 51498: 2343545, 51505: 2343791}
[2025-11-26 07:02:02] 2025-11-26 12:01:28,458 | INFO     | --------------------------------------------------
[2025-11-26 07:02:02] 2025-11-26 12:01:28,458 | INFO     | 
[2025-11-26 07:02:02] 2025-11-26 12:01:28,458 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-26 07:02:02] 2025-11-26 12:01:28,694 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,695 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,695 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,695 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,695 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,695 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,695 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,695 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,695 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,695 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,695 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,695 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,696 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,696 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,696 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,696 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:02:02] 2025-11-26 12:01:28,696 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,696 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:02:02] 2025-11-26 12:01:28,696 | INFO     | job 6896219309 has completed (purged errors)
[2025-11-26 07:02:02] 2025-11-26 12:01:28,697 | INFO     | overall cleanup function is called
[2025-11-26 07:02:02] 2025-11-26 12:01:29,732 | INFO     | --- collectZombieJob: --- 10, [2410572]
[2025-11-26 07:02:02] 2025-11-26 12:01:29,732 | INFO     | zombie collector waiting for pid 2410572
[2025-11-26 07:02:02] 2025-11-26 12:01:29,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:02:02] 2025-11-26 12:01:29,732 | INFO     | collected zombie processes
[2025-11-26 07:02:02] 2025-11-26 12:01:29,732 | INFO     | will attempt to kill all subprocesses of pid=2410572
[2025-11-26 07:02:02] 2025-11-26 12:01:30,795 | INFO     | process IDs to be killed: [2410572] (in reverse order)
[2025-11-26 07:02:02] 2025-11-26 12:01:31,051 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:02:02] 2025-11-26 12:01:31,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:02:02] 2025-11-26 12:01:31,072 | INFO     | did not find any defunct processes belonging to 2410572
[2025-11-26 07:02:02] 2025-11-26 12:01:31,097 | INFO     | did not find any defunct processes belonging to 2410572
[2025-11-26 07:02:02] 2025-11-26 12:01:31,103 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:02:02] 2025-11-26 12:01:31,103 | INFO     | ready for new job
[2025-11-26 07:02:02] 2025-11-26 12:01:31,103 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:02:02] 2025-11-26 12:01:31,160 | INFO     | ***************************************
[2025-11-26 07:02:02] 2025-11-26 12:01:31,160 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:02:02] 2025-11-26 12:01:31,160 | INFO     | ***************************************
[2025-11-26 07:02:02] 2025-11-26 12:01:31,160 | INFO     | 
[2025-11-26 07:02:02] 2025-11-26 12:01:31,165 | INFO     | architecture information:
[2025-11-26 07:02:02] 2025-11-26 12:01:31,179 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:02:02] 2025-11-26 12:01:31,281 | INFO     | cat /etc/os-release:
[2025-11-26 07:02:02] NAME="CentOS Linux"
[2025-11-26 07:02:02] VERSION="7 (Core)"
[2025-11-26 07:02:02] ID="centos"
[2025-11-26 07:02:02] ID_LIKE="rhel fedora"
[2025-11-26 07:02:02] VERSION_ID="7"
[2025-11-26 07:02:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:02:02] ANSI_COLOR="0;31"
[2025-11-26 07:02:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:02:02] HOME_URL="https://www.centos.org/"
[2025-11-26 07:02:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:02:02] 
[2025-11-26 07:02:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:02:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:02:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:02:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:02:02] 
[2025-11-26 07:02:02] 2025-11-26 12:01:31,281 | INFO     | ***************************************
[2025-11-26 07:02:02] 2025-11-26 12:01:31,785 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-26 07:02:02] 2025-11-26 12:01:32,048 | INFO     | sufficient remaining disk space (72712454144 B)
[2025-11-26 07:02:02] 2025-11-26 12:01:32,049 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:02:02] 2025-11-26 12:01:32,049 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:02:02] 2025-11-26 12:01:32,049 | INFO     | update_server=False
[2025-11-26 07:02:02] 2025-11-26 12:01:32,049 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:02:02] 2025-11-26 12:01:32,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:02:02] 2025-11-26 12:01:32,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:02:02] 2025-11-26 12:01:32,075 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:02:02] 2025-11-26 12:01:32,075 | INFO     | aborting loop
[2025-11-26 07:02:02] 2025-11-26 12:01:32,370 | INFO     | all payload control threads have been joined
[2025-11-26 07:02:02] 2025-11-26 12:01:32,683 | INFO     | all data control threads have been joined
[2025-11-26 07:02:02] 2025-11-26 12:01:32,685 | INFO     | all job control threads have been joined
[2025-11-26 07:02:02] 2025-11-26 12:01:33,055 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:33,077 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:02:02] 2025-11-26 12:01:33,081 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:33,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:02:02] 2025-11-26 12:01:33,376 | INFO     | [payload] control thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:33,477 | INFO     | [job] validate thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:33,573 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:33,587 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:33,599 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:33,604 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:33,689 | INFO     | [data] control thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:33,691 | INFO     | [job] control thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:34,076 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:34,091 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:34,181 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:34,458 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:36,067 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:42,936 | INFO     | job.realtimelogging is not enabled
[2025-11-26 07:02:02] 2025-11-26 12:01:43,942 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:02:02] 2025-11-26 12:01:45,149 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140401799518016)>', '<ExcThread(monitor, started 140401289697024)>']
[2025-11-26 07:02:02] 2025-11-26 12:01:50,175 | INFO     | all workflow threads have been joined
[2025-11-26 07:02:02] 2025-11-26 12:01:50,175 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:02:02] 2025-11-26 12:01:50,176 | INFO     | traces error code: 0
[2025-11-26 07:02:02] 2025-11-26 12:01:50,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:02:02] 2025-11-26 12:02:01,704 | INFO     | PID=2402728 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 07:02:02] 2025-11-26 12:02:01,705 | INFO     | .. there are 23 such processes running
[2025-11-26 07:02:02] 2025-11-26 12:02:01,705 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:02:02] 2025-11-26 12:02:01,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:02:02] 2025-11-26 12:02:01,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:02:02] 2025-11-26 12:02:01,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:02:02] 2025-11-26 12:02:01,705 | INFO     | [monitor] control thread has ended
[2025-11-26 07:02:02] 2025-11-26 12:02:01,958 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:02:02] 2025-11-26 12:02:01,961 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:02:02] 2025-11-26 12:02:01,964 [wrapper] pilotpid: 2402728
[2025-11-26 07:02:02] 2025-11-26 12:02:01,966 [wrapper] Pilot exit status: 0
[2025-11-26 07:02:02] 2025-11-26 12:02:01,981 [wrapper] pandaids: 6896219309
[2025-11-26 07:02:02] 2025-11-26 12:02:02,055 [wrapper] cleanup supervisor_pilot  557874 2402729
[2025-11-26 07:02:02] 2025-11-26 12:02:02,059 [wrapper] Test setup, not cleaning
[2025-11-26 07:02:02] 2025-11-26 12:02:02,063 [wrapper] apfmon messages muted
[2025-11-26 07:02:02] 2025-11-26 12:02:02,066 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:02:02] 2025-11-26 12:02:02,069 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:02:02]  *** Error codes and diagnostics ***
[2025-11-26 07:02:02]     "exeErrorCode": 0,
[2025-11-26 07:02:02]     "exeErrorDiag": "",
[2025-11-26 07:02:02]     "pilotErrorCode": 0,
[2025-11-26 07:02:02]     "pilotErrorDiag": "",
[2025-11-26 07:02:02]  *** Listing of results directory ***
[2025-11-26 07:02:02] total 1314772
[2025-11-26 07:02:02] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 14:02 pilot3.tar.gz
[2025-11-26 07:02:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 14:57 queuedata.json
[2025-11-26 07:02:02] -rwx------. 1 boincer umatlas     36292 Nov 24 14:58 runpilot2-wrapper.sh
[2025-11-26 07:02:02] -rw-r--r--. 1 boincer umatlas       100 Nov 25 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:02:02] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 16:41 run_atlas
[2025-11-26 07:02:02] -rw-r--r--. 1 boincer umatlas       105 Nov 25 16:41 job.xml
[2025-11-26 07:02:02] -rw-r--r--. 2 boincer umatlas 410199744 Nov 25 16:41 EVNT.47483658._001413.pool.root.1
[2025-11-26 07:02:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 16:41 start_atlas.sh
[2025-11-26 07:02:02] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 16:41 shared
[2025-11-26 07:02:02] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 16:41 input.tar.gz
[2025-11-26 07:02:02] -rw-r--r--. 1 boincer umatlas         0 Nov 25 16:41 boinc_lockfile
[2025-11-26 07:02:02] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 16:41 pandaJob.out
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas        57 Nov 25 16:41 setup.sh.local
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas    991893 Nov 25 16:42 agis_schedconf.cvmfs.json
[2025-11-26 07:02:02] drwx------. 5 boincer umatlas      4096 Nov 25 16:42 pilot3
[2025-11-26 07:02:02] -rw-r--r--. 1 boincer umatlas       533 Nov 26 06:49 boinc_task_state.xml
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas 914348849 Nov 26 07:00 HITS.47556149._003996.pool.root.1
[2025-11-26 07:02:02] -rw-r--r--. 1 boincer umatlas      6845 Nov 26 07:00 init_data.xml
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas      1066 Nov 26 07:01 memory_monitor_summary.json
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas   1516240 Nov 26 07:01 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas        95 Nov 26 07:01 pilot_heartbeat.json
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas   2061689 Nov 26 07:01 log.47556149._003996.job.log.tgz.1
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas      8634 Nov 26 07:01 heartbeat.json
[2025-11-26 07:02:02] -rw-r--r--. 1 boincer umatlas        29 Nov 26 07:01 wrapper_checkpoint.txt
[2025-11-26 07:02:02] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 07:01 boinc_mmap_file
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas       823 Nov 26 07:02 pilotlog.txt
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas   6867264 Nov 26 07:02 log.47556149._003996.job.log.1
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas       353 Nov 26 07:02 output.list
[2025-11-26 07:02:02] -rw-r--r--. 1 boincer umatlas       620 Nov 26 07:02 runtime_log
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas   8949760 Nov 26 07:02 result.tar.gz
[2025-11-26 07:02:02] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 07:02 runtime_log.err
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas       663 Nov 26 07:02 kynMDm9srh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAuLKDmuZGJBo.diag
[2025-11-26 07:02:02] -rw-r--r--. 1 boincer umatlas     21188 Nov 26 07:02 stderr.txt
[2025-11-26 07:02:02] HITS file was successfully produced:
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas 914348849 Nov 26 07:00 shared/HITS.pool.root.1
[2025-11-26 07:02:02]  *** Contents of shared directory: ***
[2025-11-26 07:02:02] total 1302852
[2025-11-26 07:02:02] -rw-r--r--. 2 boincer umatlas 410199744 Nov 25 16:41 ATLAS.root_0
[2025-11-26 07:02:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 16:41 start_atlas.sh
[2025-11-26 07:02:02] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 16:41 input.tar.gz
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas 914348849 Nov 26 07:00 HITS.pool.root.1
[2025-11-26 07:02:02] -rw-------. 1 boincer umatlas   8949760 Nov 26 07:02 result.tar.gz
07:02:04 (2396176): run_atlas exited; CPU time 225743.792064
07:02:04 (2396176): called boinc_finish(0)

</stderr_txt>
]]>

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