Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:15:16 (3150990): wrapper (7.7.26015): starting
10:15:16 (3150990): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 10:15:16] Arguments: --nthreads 12
[2025-11-25 10:15:16] Threads: 12
[2025-11-25 10:15:16] Checking for CVMFS
[2025-11-25 10:15:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 10:15:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 10:15:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 10:15:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 10:15:17] 2.11.5.0 1829866 26983 139288 153293 3 13 34334740 45568001 17929 130560 0 243310455 99.767 174893928 28684 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-25 10:15:17] CVMFS is ok
[2025-11-25 10:15:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 10:15:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 10:15:17] Further information can be found at the LHC@home message board.
[2025-11-25 10:15:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 10:15:17] Checking for apptainer binary...
[2025-11-25 10:15:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 10:15:17] Running /usr/bin/apptainer --version
[2025-11-25 10:15:17] apptainer version 1.4.1-1.el9
[2025-11-25 10:15:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 10:15:17] wns0093.triumf.lcg
[2025-11-25 10:15:17] apptainer works
[2025-11-25 10:15:17] Set ATHENA_PROC_NUMBER=12
[2025-11-25 10:15:17] Set ATHENA_CORE_NUMBER=12
[2025-11-25 10:15:17] Starting ATLAS job with PandaID=6894239162
[2025-11-25 10:15:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 10:18:30]  *** The last 200 lines of the pilot log: ***
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | WARNING  | wrong length of table data, x=[1764094549.0], y=[1119.0] (must be same and length>=4)
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | INFO     | could have reported an average CPU frequency of 2724 MHz (4 samples)
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | INFO     | ..............................
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | INFO     | . Timing measurements:
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . get job = 0 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . initial setup = 2 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . payload setup = 5 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . stage-in = 0 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . payload execution = 16 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . stage-out = 0 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . log creation = 0 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | ..............................
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894239162/pilotlog.txt
[2025-11-25 10:18:30] 2025-11-25 18:18:07,548 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-25 10:18:30] - Log from pilotlog.txt -
[2025-11-25 10:18:30] 2025-11-25 18:18:07,536 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 10:18:30] 2025-11-25 18:18:07,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | WARNING  | found no stored workdir sizes
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | INFO     | will not add max space = 0 B to job metrics
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | WARNING  | wrong length of table data, x=[1764094549.0], y=[1119.0] (must be same and length>=4)
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | INFO     | could have reported an average CPU frequency of 2724 MHz (4 samples)
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | INFO     | ..............................
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | INFO     | . Timing measurements:
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . get job = 0 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . initial setup = 2 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . payload setup = 5 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . stage-in = 0 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . payload execution = 16 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . stage-out = 0 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . log creation = 0 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | ..............................
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894239162/pilotlog.txt
[2025-11-25 10:18:30] 2025-11-25 18:18:07,548 | WARNING  | 
[2025-11-25 10:18:30] [begin log extracts]
[2025-11-25 10:18:30] - Log from pilotlog.txt -
[2025-11-25 10:18:30] 2025-11-25 18:18:07,536 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 10:18:30] 2025-11-25 18:18:07,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | WARNING  | found no stored workdir sizes
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | INFO     | will not add max space = 0 B to job metrics
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | WARNING  | wrong length of table data, x=[1764094549.0], y=[1119.0] (must be same and length>=4)
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | INFO     | could have reported an average CPU frequency of 2724 MHz (4 samples)
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | INFO     | ..............................
[2025-11-25 10:18:30] 2025-11-25 18:18:07,537 | INFO     | . Timing measurements:
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . get job = 0 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . initial setup = 2 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . payload setup = 5 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . stage-in = 0 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . payload execution = 16 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . stage-out = 0 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | . log creation = 0 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | ..............................
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 10:18:30] 2025-11-25 18:18:07,538 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894239162/pilotlog.txt
[2025-11-25 10:18:30] [end log extracts]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,549 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-11-25 10:18:30] 2025-11-25 18:18:07,549 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-25 10:18:30] 2025-11-25 18:18:07,726 | INFO     | time since job start (162s) is within the limit (172800.0s)
[2025-11-25 10:18:30] 2025-11-25 18:18:07,848 | INFO     | 
[2025-11-25 10:18:30] 2025-11-25 18:18:07,848 | INFO     | job summary report
[2025-11-25 10:18:30] 2025-11-25 18:18:07,848 | INFO     | --------------------------------------------------
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | PanDA job id: 6894239162
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | task id: 47523939
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-25 10:15:57,979 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | pilot state: failed 
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | transexitcode: 65
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | exeerrorcode: 65
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | exitcode: 65
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | cpuconsumptiontime: 17 s
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | nevents: 0
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | neventsw: 0
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | pid: 3161267
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | pgrp: 3161267
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | corecount: 12
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | event service: False
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | sizes: {0: 2283893, 3: 2284155, 10: 2284183, 25: 2311747, 28: 2311747, 148: 2311913}
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | --------------------------------------------------
[2025-11-25 10:18:30] 2025-11-25 18:18:07,849 | INFO     | 
[2025-11-25 10:18:30] 2025-11-25 18:18:07,850 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-25 10:18:30] 2025-11-25 18:18:07,864 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,865 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 10:18:30] 2025-11-25 18:18:07,866 | INFO     | job 6894239162 has completed (purged errors)
[2025-11-25 10:18:30] 2025-11-25 18:18:07,866 | INFO     | overall cleanup function is called
[2025-11-25 10:18:30] 2025-11-25 18:18:08,871 | INFO     | --- collectZombieJob: --- 10, [3161267]
[2025-11-25 10:18:30] 2025-11-25 18:18:08,871 | INFO     | zombie collector waiting for pid 3161267
[2025-11-25 10:18:30] 2025-11-25 18:18:08,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 10:18:30] 2025-11-25 18:18:08,871 | INFO     | collected zombie processes
[2025-11-25 10:18:30] 2025-11-25 18:18:08,872 | INFO     | will attempt to kill all subprocesses of pid=3161267
[2025-11-25 10:18:30] 2025-11-25 18:18:09,024 | INFO     | process IDs to be killed: [3161267] (in reverse order)
[2025-11-25 10:18:30] 2025-11-25 18:18:09,084 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 10:18:30] 2025-11-25 18:18:09,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 10:18:30] 2025-11-25 18:18:09,091 | INFO     | did not find any defunct processes belonging to 3161267
[2025-11-25 10:18:30] 2025-11-25 18:18:09,096 | INFO     | did not find any defunct processes belonging to 3161267
[2025-11-25 10:18:30] 2025-11-25 18:18:09,097 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 10:18:30] 2025-11-25 18:18:09,097 | INFO     | ready for new job
[2025-11-25 10:18:30] 2025-11-25 18:18:09,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 10:18:30] 2025-11-25 18:18:09,099 | INFO     | ***************************************
[2025-11-25 10:18:30] 2025-11-25 18:18:09,099 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 10:18:30] 2025-11-25 18:18:09,099 | INFO     | ***************************************
[2025-11-25 10:18:30] 2025-11-25 18:18:09,099 | INFO     | 
[2025-11-25 10:18:30] 2025-11-25 18:18:09,101 | INFO     | architecture information:
[2025-11-25 10:18:30] 2025-11-25 18:18:09,101 | INFO     | executing command: cat /etc/os-release
[2025-11-25 10:18:30] 2025-11-25 18:18:09,111 | INFO     | cat /etc/os-release:
[2025-11-25 10:18:30] NAME="CentOS Linux"
[2025-11-25 10:18:30] VERSION="7 (Core)"
[2025-11-25 10:18:30] ID="centos"
[2025-11-25 10:18:30] ID_LIKE="rhel fedora"
[2025-11-25 10:18:30] VERSION_ID="7"
[2025-11-25 10:18:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 10:18:30] ANSI_COLOR="0;31"
[2025-11-25 10:18:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 10:18:30] HOME_URL="https://www.centos.org/"
[2025-11-25 10:18:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 10:18:30] 
[2025-11-25 10:18:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 10:18:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 10:18:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 10:18:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 10:18:30] 
[2025-11-25 10:18:30] 2025-11-25 18:18:09,111 | INFO     | ***************************************
[2025-11-25 10:18:30] 2025-11-25 18:18:09,613 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-25 10:18:30] 2025-11-25 18:18:09,624 | INFO     | sufficient remaining disk space (2045685792768 B)
[2025-11-25 10:18:30] 2025-11-25 18:18:09,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 10:18:30] 2025-11-25 18:18:09,625 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 10:18:30] 2025-11-25 18:18:09,625 | INFO     | update_server=False
[2025-11-25 10:18:30] 2025-11-25 18:18:09,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 10:18:30] 2025-11-25 18:18:09,625 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 10:18:30] 2025-11-25 18:18:09,626 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 10:18:30] 2025-11-25 18:18:09,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 10:18:30] 2025-11-25 18:18:09,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 10:18:30] 2025-11-25 18:18:10,077 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 10:18:30] 2025-11-25 18:18:10,077 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 10:18:30] 2025-11-25 18:18:10,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:18:30] 2025-11-25 18:18:10,078 | INFO     | will abort loop
[2025-11-25 10:18:30] 2025-11-25 18:18:10,557 | INFO     | all job control threads have been joined
[2025-11-25 10:18:30] 2025-11-25 18:18:10,606 | INFO     | all payload control threads have been joined
[2025-11-25 10:18:30] 2025-11-25 18:18:10,621 | INFO     | all data control threads have been joined
[2025-11-25 10:18:30] 2025-11-25 18:18:10,630 | INFO     | [job] retrieve thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:10,636 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:10,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 10:18:30] 2025-11-25 18:18:10,880 | INFO     | [payload] failed_post thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:11,066 | INFO     | [payload] validate_post thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:11,074 | INFO     | [data] copytool_in thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:11,082 | INFO     | [job] job monitor thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:11,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 10:18:30] 2025-11-25 18:18:11,559 | INFO     | [job] control thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:11,612 | INFO     | [payload] control thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:11,626 | INFO     | [data] control thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:11,739 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:11,908 | INFO     | [job] validate thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:12,028 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:12,066 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:12,617 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:18:30] 2025-11-25 18:18:12,733 | INFO     | [data] copytool_out thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:13,622 | INFO     | [job] queue monitor thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:15,120 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 10:18:30] 2025-11-25 18:18:25,201 | INFO     | [monitor] cgroup control has ended
[2025-11-25 10:18:30] 2025-11-25 18:18:25,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140558784112448)>', '<ExcThread(monitor, started 140557963749120)>']
[2025-11-25 10:18:30] 2025-11-25 18:18:25,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 10:18:30] 2025-11-25 18:18:25,700 | INFO     | [monitor] control thread has ended
[2025-11-25 10:18:30] 2025-11-25 18:18:30,362 | INFO     | all workflow threads have been joined
[2025-11-25 10:18:30] 2025-11-25 18:18:30,362 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 10:18:30] 2025-11-25 18:18:30,362 | INFO     | traces error code: 0
[2025-11-25 10:18:30] 2025-11-25 18:18:30,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 10:18:30] 2025-11-25 18:18:30,502 [wrapper] ==== pilot stdout END ====
[2025-11-25 10:18:30] 2025-11-25 18:18:30,503 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 10:18:30] 2025-11-25 18:18:30,505 [wrapper] pilotpid: 3154713
[2025-11-25 10:18:30] 2025-11-25 18:18:30,507 [wrapper] Pilot exit status: 0
[2025-11-25 10:18:30] 2025-11-25 18:18:30,514 [wrapper] pandaids: 6894239162
[2025-11-25 10:18:30] 2025-11-25 18:18:30,552 [wrapper] cleanup supervisor_pilot 3154719 3154714
[2025-11-25 10:18:30] 2025-11-25 18:18:30,553 [wrapper] Test setup, not cleaning
[2025-11-25 10:18:30] 2025-11-25 18:18:30,555 [wrapper] apfmon messages muted
[2025-11-25 10:18:30] 2025-11-25 18:18:30,557 [wrapper] ==== wrapper stdout END ====
[2025-11-25 10:18:30] 2025-11-25 18:18:30,559 [wrapper] ==== wrapper stderr END ====
[2025-11-25 10:18:30]  *** Error codes and diagnostics ***
[2025-11-25 10:18:30]     "exeErrorCode": 65,
[2025-11-25 10:18:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-11-25 10:18:30]     "pilotErrorCode": 1305,
[2025-11-25 10:18:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-11-25 10:18:30]  *** Listing of results directory ***
[2025-11-25 10:18:30] total 294316
[2025-11-25 10:18:30] -rw-r--r--. 1 boinc boinc    576529 Nov 24 23:04 pilot3.tar.gz
[2025-11-25 10:18:30] -rwx------. 1 boinc boinc     36292 Nov 24 23:23 runpilot2-wrapper.sh
[2025-11-25 10:18:30] -rw-r--r--. 1 boinc boinc      5112 Nov 24 23:23 queuedata.json
[2025-11-25 10:18:30] -rw-r--r--. 1 boinc boinc       100 Nov 25 10:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 10:18:30] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 10:15 run_atlas
[2025-11-25 10:18:30] -rw-r--r--. 1 boinc boinc       105 Nov 25 10:15 job.xml
[2025-11-25 10:18:30] -rw-r--r--. 1 boinc boinc      6595 Nov 25 10:15 init_data.xml
[2025-11-25 10:18:30] -rw-r--r--. 2 boinc boinc 297259225 Nov 25 10:15 EVNT.47523935._000002.pool.root.1
[2025-11-25 10:18:30] -rw-r--r--. 2 boinc boinc     15847 Nov 25 10:15 start_atlas.sh
[2025-11-25 10:18:30] drwxrwx--x. 2 boinc boinc      4096 Nov 25 10:15 shared
[2025-11-25 10:18:30] -rw-r--r--. 2 boinc boinc    589939 Nov 25 10:15 input.tar.gz
[2025-11-25 10:18:30] -rw-r--r--. 1 boinc boinc         0 Nov 25 10:15 boinc_lockfile
[2025-11-25 10:18:30] -rw-r--r--. 1 boinc boinc      2609 Nov 25 10:15 pandaJob.out
[2025-11-25 10:18:30] -rw-------. 1 boinc boinc    991543 Nov 25 10:15 agis_schedconf.cvmfs.json
[2025-11-25 10:18:30] -rw-------. 1 boinc boinc   1516240 Nov 25 10:15 agis_ddmendpoints.agis.ALL.json
[2025-11-25 10:18:30] drwx------. 5 boinc boinc      4096 Nov 25 10:15 pilot3
[2025-11-25 10:18:30] -rw-r--r--. 1 boinc boinc       522 Nov 25 10:15 boinc_task_state.xml
[2025-11-25 10:18:30] -rw-------. 1 boinc boinc       969 Nov 25 10:16 memory_monitor_summary.json
[2025-11-25 10:18:30] -rw-------. 1 boinc boinc     20484 Nov 25 10:16 log.47523939._000036.job.log.tgz.1
[2025-11-25 10:18:30] -rw-------. 1 boinc boinc        95 Nov 25 10:17 pilot_heartbeat.json
[2025-11-25 10:18:30] -rw-------. 1 boinc boinc      8402 Nov 25 10:18 heartbeat.json
[2025-11-25 10:18:30] -rw-r--r--. 1 boinc boinc      8192 Nov 25 10:18 boinc_mmap_file
[2025-11-25 10:18:30] -rw-r--r--. 1 boinc boinc        22 Nov 25 10:18 wrapper_checkpoint.txt
[2025-11-25 10:18:30] -rw-------. 1 boinc boinc      4737 Nov 25 10:18 pilotlog.txt
[2025-11-25 10:18:30] -rw-------. 1 boinc boinc     85376 Nov 25 10:18 log.47523939._000036.job.log.1
[2025-11-25 10:18:30] -rw-------. 1 boinc boinc       188 Nov 25 10:18 output.list
[2025-11-25 10:18:30] -rw-r--r--. 1 boinc boinc       620 Nov 25 10:18 runtime_log
[2025-11-25 10:18:30] -rw-------. 1 boinc boinc    122880 Nov 25 10:18 result.tar.gz
[2025-11-25 10:18:30] -rw-------. 1 boinc boinc       646 Nov 25 10:18 S63KDmiZ2h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGFMKDmSzTd1m.diag
[2025-11-25 10:18:30] -rw-r--r--. 1 boinc boinc      8636 Nov 25 10:18 runtime_log.err
[2025-11-25 10:18:30] -rw-r--r--. 1 boinc boinc     21726 Nov 25 10:18 stderr.txt
[2025-11-25 10:18:30] No HITS result produced
[2025-11-25 10:18:30]  *** Contents of shared directory: ***
[2025-11-25 10:18:30] total 291012
[2025-11-25 10:18:30] -rw-r--r--. 2 boinc boinc 297259225 Nov 25 10:15 ATLAS.root_0
[2025-11-25 10:18:30] -rw-r--r--. 2 boinc boinc     15847 Nov 25 10:15 start_atlas.sh
[2025-11-25 10:18:30] -rw-r--r--. 2 boinc boinc    589939 Nov 25 10:15 input.tar.gz
[2025-11-25 10:18:30] -rw-------. 1 boinc boinc    122880 Nov 25 10:18 result.tar.gz
10:18:31 (3150990): run_atlas exited; CPU time 20.142948
10:18:31 (3150990): called boinc_finish(0)

</stderr_txt>
]]>

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