Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:34:58 (23552): wrapper (7.7.26015): starting
13:34:58 (23552): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 13:34:58] Arguments: --nthreads 12
[2025-11-25 13:34:58] Threads: 12
[2025-11-25 13:34:58] Checking for CVMFS
[2025-11-25 13:34:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 13:34:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 13:34:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 13:34:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 13:34:58] 2.11.2.0 2947 286562 91388 153293 2 81 15622261 20275200 1 130560 1 129130502 99.971 16402086 12776 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 13:34:58] CVMFS is ok
[2025-11-25 13:34:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:34:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:34:58] Further information can be found at the LHC@home message board.
[2025-11-25 13:34:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:34:58] Checking for apptainer binary...
[2025-11-25 13:34:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 13:34:58] Running /usr/bin/apptainer --version
[2025-11-25 13:34:58] apptainer version 1.3.2-1.el7
[2025-11-25 13:34:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:35:00] c-205-18.aglt2.org
[2025-11-25 13:35:00] apptainer works
[2025-11-25 13:35:00] Set ATHENA_PROC_NUMBER=12
[2025-11-25 13:35:00] Set ATHENA_CORE_NUMBER=12
[2025-11-25 13:35:00] Starting ATLAS job with PandaID=6896219224
[2025-11-25 13:35:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:33:01]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:33:01] 2025-11-26 01:32:22,167 | INFO     | PID=28855 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 20:33:01] 2025-11-26 01:32:23,167 | INFO     | time since job start (25029s) is within the limit (172800.0s)
[2025-11-25 20:33:01] 2025-11-26 01:32:23,544 | INFO     | monitor loop #1878: job 0:6896219224 is in state 'finished'
[2025-11-25 20:33:01] 2025-11-26 01:32:23,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 20:33:01] 2025-11-26 01:32:24,167 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 20:33:01] 2025-11-26 01:32:24,171 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.6666666666667
[2025-11-25 20:33:01] 2025-11-26 01:32:24,173 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896219224/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 20:33:01] 2025-11-26 01:32:24,174 | INFO     | extracted standard info from prmon json
[2025-11-25 20:33:01] 2025-11-26 01:32:24,174 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 20:33:01] 2025-11-26 01:32:24,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 20:33:01] 2025-11-26 01:32:24,182 | INFO     | fitting pss+swap vs Time
[2025-11-25 20:33:01] 2025-11-26 01:32:24,183 | INFO     | sum of square deviations: 21371177890.03902
[2025-11-25 20:33:01] 2025-11-26 01:32:24,186 | INFO     | sum of deviations: 344859697208.06793
[2025-11-25 20:33:01] 2025-11-26 01:32:24,186 | INFO     | mean x: 1764108218.687805
[2025-11-25 20:33:01] 2025-11-26 01:32:24,187 | INFO     | mean y: 3424772.9536585365
[2025-11-25 20:33:01] 2025-11-26 01:32:24,187 | INFO     | intersect: -28463411695.732426
[2025-11-25 20:33:01] 2025-11-26 01:32:24,187 | INFO     | chi2: 5.868582682425869
[2025-11-25 20:33:01] 2025-11-26 01:32:24,188 | INFO     | sum of square deviations: 20598824102.36028
[2025-11-25 20:33:01] 2025-11-26 01:32:24,191 | INFO     | sum of deviations: 507561788560.3608
[2025-11-25 20:33:01] 2025-11-26 01:32:24,191 | INFO     | mean x: 1764108066.1901236
[2025-11-25 20:33:01] 2025-11-26 01:32:24,191 | INFO     | mean y: 3456878.190123457
[2025-11-25 20:33:01] 2025-11-26 01:32:24,192 | INFO     | intersect: -43464745036.62798
[2025-11-25 20:33:01] 2025-11-26 01:32:24,192 | INFO     | chi2: 2.577334554061709
[2025-11-25 20:33:01] 2025-11-26 01:32:24,192 | INFO     | current chi2=2.577334554061709 (change=56.082504183167984 %)
[2025-11-25 20:33:01] 2025-11-26 01:32:24,193 | INFO     | sum of square deviations: 19845307877.177654
[2025-11-25 20:33:01] 2025-11-26 01:32:24,196 | INFO     | sum of deviations: 528576274622.2599
[2025-11-25 20:33:01] 2025-11-26 01:32:24,196 | INFO     | mean x: 1764107913.6925
[2025-11-25 20:33:01] 2025-11-26 01:32:24,196 | INFO     | mean y: 3461083.62
[2025-11-25 20:33:01] 2025-11-26 01:32:24,197 | INFO     | intersect: -46983242011.24987
[2025-11-25 20:33:01] 2025-11-26 01:32:24,197 | INFO     | chi2: 2.324347852883059
[2025-11-25 20:33:01] 2025-11-26 01:32:24,197 | INFO     | current chi2=2.324347852883059 (change=9.815827005460346 %)
[2025-11-25 20:33:01] 2025-11-26 01:32:24,197 | INFO     | right removable region: 399
[2025-11-25 20:33:01] 2025-11-26 01:32:24,198 | INFO     | sum of square deviations: 20598777132.36028
[2025-11-25 20:33:01] 2025-11-26 01:32:24,201 | INFO     | sum of deviations: 218447406284.96765
[2025-11-25 20:33:01] 2025-11-26 01:32:24,201 | INFO     | mean x: 1764108371.1901236
[2025-11-25 20:33:01] 2025-11-26 01:32:24,201 | INFO     | mean y: 3449638.4419753086
[2025-11-25 20:33:01] 2025-11-26 01:32:24,202 | INFO     | intersect: -18704694811.874966
[2025-11-25 20:33:01] 2025-11-26 01:32:24,202 | INFO     | chi2: 3.682255514736791
[2025-11-25 20:33:01] 2025-11-26 01:32:24,202 | INFO     | current chi2=3.682255514736791 (change=37.2547731880183 %)
[2025-11-25 20:33:01] 2025-11-26 01:32:24,203 | INFO     | sum of square deviations: 19845213937.177654
[2025-11-25 20:33:01] 2025-11-26 01:32:24,206 | INFO     | sum of deviations: 188888153667.94766
[2025-11-25 20:33:01] 2025-11-26 01:32:24,206 | INFO     | mean x: 1764108523.6925
[2025-11-25 20:33:01] 2025-11-26 01:32:24,206 | INFO     | mean y: 3455612.6825
[2025-11-25 20:33:01] 2025-11-26 01:32:24,207 | INFO     | intersect: -16787454425.627472
[2025-11-25 20:33:01] 2025-11-26 01:32:24,207 | INFO     | chi2: 3.638721737861035
[2025-11-25 20:33:01] 2025-11-26 01:32:24,207 | INFO     | current chi2=3.638721737861035 (change=1.182258447343734 %)
[2025-11-25 20:33:01] 2025-11-26 01:32:24,207 | INFO     | left removable region: 20
[2025-11-25 20:33:01] 2025-11-26 01:32:24,208 | INFO     | sum of square deviations: 16880809563.356258
[2025-11-25 20:33:01] 2025-11-26 01:32:24,211 | INFO     | sum of deviations: 334493607481.8128
[2025-11-25 20:33:01] 2025-11-26 01:32:24,211 | INFO     | mean x: 1764108493.2031662
[2025-11-25 20:33:01] 2025-11-26 01:32:24,211 | INFO     | mean y: 3500990.9894459103
[2025-11-25 20:33:01] 2025-11-26 01:32:24,211 | INFO     | intersect: -34952347048.53498
[2025-11-25 20:33:01] 2025-11-26 01:32:24,212 | INFO     | chi2: 0.037575775497832545
[2025-11-25 20:33:01] 2025-11-26 01:32:24,212 | INFO     | current memory leak: 19.82 B/s (using 379 data points, chi2=0.04)
[2025-11-25 20:33:01] 2025-11-26 01:32:24,212 | INFO     | could have reported an average CPU frequency of 2385 MHz (17 samples)
[2025-11-25 20:33:01] 2025-11-26 01:32:24,213 | INFO     | ..............................
[2025-11-25 20:33:01] 2025-11-26 01:32:24,213 | INFO     | . Timing measurements:
[2025-11-25 20:33:01] 2025-11-26 01:32:24,213 | INFO     | . get job = 0 s
[2025-11-25 20:33:01] 2025-11-26 01:32:24,213 | INFO     | . initial setup = 2 s
[2025-11-25 20:33:01] 2025-11-26 01:32:24,213 | INFO     | . payload setup = 7 s
[2025-11-25 20:33:01] 2025-11-26 01:32:24,213 | INFO     | . stage-in = 0 s
[2025-11-25 20:33:01] 2025-11-26 01:32:24,213 | INFO     | . payload execution = 24987 s
[2025-11-25 20:33:01] 2025-11-26 01:32:24,213 | INFO     | . stage-out = 3 s
[2025-11-25 20:33:01] 2025-11-26 01:32:24,214 | INFO     | . log creation = 0 s
[2025-11-25 20:33:01] 2025-11-26 01:32:24,214 | INFO     | ..............................
[2025-11-25 20:33:01] 2025-11-26 01:32:24,296 | INFO     | 
[2025-11-25 20:33:01] 2025-11-26 01:32:24,296 | INFO     | job summary report
[2025-11-25 20:33:01] 2025-11-26 01:32:24,296 | INFO     | --------------------------------------------------
[2025-11-25 20:33:01] 2025-11-26 01:32:24,297 | INFO     | PanDA job id: 6896219224
[2025-11-25 20:33:01] 2025-11-26 01:32:24,297 | INFO     | task id: 47556161
[2025-11-25 20:33:01] 2025-11-26 01:32:24,297 | INFO     | errors: (none)
[2025-11-25 20:33:01] 2025-11-26 01:32:24,297 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:33:01] 2025-11-26 01:32:24,297 | INFO     | pilot state: finished 
[2025-11-25 20:33:01] 2025-11-26 01:32:24,297 | INFO     | transexitcode: 0
[2025-11-25 20:33:01] 2025-11-26 01:32:24,298 | INFO     | exeerrorcode: 0
[2025-11-25 20:33:01] 2025-11-26 01:32:24,298 | INFO     | exeerrordiag: 
[2025-11-25 20:33:01] 2025-11-26 01:32:24,298 | INFO     | exitcode: 0
[2025-11-25 20:33:01] 2025-11-26 01:32:24,298 | INFO     | exitmsg: OK
[2025-11-25 20:33:01] 2025-11-26 01:32:24,298 | INFO     | cpuconsumptiontime: 287301 s
[2025-11-25 20:33:01] 2025-11-26 01:32:24,298 | INFO     | nevents: 1000
[2025-11-25 20:33:01] 2025-11-26 01:32:24,298 | INFO     | neventsw: 0
[2025-11-25 20:33:01] 2025-11-26 01:32:24,298 | INFO     | pid: 3414
[2025-11-25 20:33:01] 2025-11-26 01:32:24,298 | INFO     | pgrp: 3414
[2025-11-25 20:33:01] 2025-11-26 01:32:24,299 | INFO     | corecount: 12
[2025-11-25 20:33:01] 2025-11-26 01:32:24,299 | INFO     | event service: False
[2025-11-25 20:33:01] 2025-11-26 01:32:24,299 | INFO     | sizes: {0: 2284313, 1: 2284341, 5: 2284603, 11: 2284659, 24998: 2321554, 25002: 2330548, 25006: 2330732, 25013: 2331042}
[2025-11-25 20:33:01] 2025-11-26 01:32:24,299 | INFO     | --------------------------------------------------
[2025-11-25 20:33:01] 2025-11-26 01:32:24,299 | INFO     | 
[2025-11-25 20:33:01] 2025-11-26 01:32:24,299 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 20:33:01] 2025-11-26 01:32:24,347 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,347 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,347 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,347 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,348 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,349 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,349 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:33:01] 2025-11-26 01:32:24,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,349 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:33:01] 2025-11-26 01:32:24,349 | INFO     | job 6896219224 has completed (purged errors)
[2025-11-25 20:33:01] 2025-11-26 01:32:24,350 | INFO     | overall cleanup function is called
[2025-11-25 20:33:01] 2025-11-26 01:32:25,364 | INFO     | --- collectZombieJob: --- 10, [3414]
[2025-11-25 20:33:01] 2025-11-26 01:32:25,365 | INFO     | zombie collector waiting for pid 3414
[2025-11-25 20:33:01] 2025-11-26 01:32:25,365 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:33:01] 2025-11-26 01:32:25,365 | INFO     | collected zombie processes
[2025-11-25 20:33:01] 2025-11-26 01:32:25,365 | INFO     | will attempt to kill all subprocesses of pid=3414
[2025-11-25 20:33:01] 2025-11-26 01:32:25,459 | INFO     | process IDs to be killed: [3414] (in reverse order)
[2025-11-25 20:33:01] 2025-11-26 01:32:25,509 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:33:01] 2025-11-26 01:32:25,509 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:33:01] 2025-11-26 01:32:25,513 | INFO     | did not find any defunct processes belonging to 3414
[2025-11-25 20:33:01] 2025-11-26 01:32:25,517 | INFO     | did not find any defunct processes belonging to 3414
[2025-11-25 20:33:01] 2025-11-26 01:32:25,520 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:33:01] 2025-11-26 01:32:25,520 | INFO     | ready for new job
[2025-11-25 20:33:01] 2025-11-26 01:32:25,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:33:01] 2025-11-26 01:32:25,523 | INFO     | ***************************************
[2025-11-25 20:33:01] 2025-11-26 01:32:25,524 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:33:01] 2025-11-26 01:32:25,524 | INFO     | ***************************************
[2025-11-25 20:33:01] 2025-11-26 01:32:25,524 | INFO     | 
[2025-11-25 20:33:01] 2025-11-26 01:32:25,525 | INFO     | architecture information:
[2025-11-25 20:33:01] 2025-11-26 01:32:25,525 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:33:01] 2025-11-26 01:32:25,541 | INFO     | cat /etc/os-release:
[2025-11-25 20:33:01] NAME="CentOS Linux"
[2025-11-25 20:33:01] VERSION="7 (Core)"
[2025-11-25 20:33:01] ID="centos"
[2025-11-25 20:33:01] ID_LIKE="rhel fedora"
[2025-11-25 20:33:01] VERSION_ID="7"
[2025-11-25 20:33:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:33:01] ANSI_COLOR="0;31"
[2025-11-25 20:33:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:33:01] HOME_URL="https://www.centos.org/"
[2025-11-25 20:33:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:33:01] 
[2025-11-25 20:33:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:33:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:33:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:33:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:33:01] 
[2025-11-25 20:33:01] 2025-11-26 01:32:25,541 | INFO     | ***************************************
[2025-11-25 20:33:01] 2025-11-26 01:32:26,044 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 20:33:01] 2025-11-26 01:32:26,061 | INFO     | sufficient remaining disk space (28258074624 B)
[2025-11-25 20:33:01] 2025-11-26 01:32:26,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:33:01] 2025-11-26 01:32:26,061 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:33:01] 2025-11-26 01:32:26,061 | INFO     | update_server=False
[2025-11-25 20:33:01] 2025-11-26 01:32:26,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:33:01] 2025-11-26 01:32:26,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:33:01] 2025-11-26 01:32:26,171 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:33:01] 2025-11-26 01:32:26,200 | INFO     | all job control threads have been joined
[2025-11-25 20:33:01] 2025-11-26 01:32:26,424 | INFO     | all data control threads have been joined
[2025-11-25 20:33:01] 2025-11-26 01:32:27,019 | INFO     | all payload control threads have been joined
[2025-11-25 20:33:01] 2025-11-26 01:32:27,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:33:01] 2025-11-26 01:32:27,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:33:01] 2025-11-26 01:32:27,062 | INFO     | aborting loop
[2025-11-25 20:33:01] 2025-11-26 01:32:27,065 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:27,067 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:27,206 | INFO     | [job] control thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:27,316 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:27,429 | INFO     | [data] control thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:27,700 | INFO     | [job] validate thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:27,869 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:27,914 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:28,025 | INFO     | [payload] control thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:28,044 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:28,067 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:28,177 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:28,362 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:28,379 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:28,498 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:31,035 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:33:01] 2025-11-26 01:32:55,754 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:33:01] 2025-11-26 01:32:55,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639975671616)>', '<ExcThread(monitor, started 139639067219712)>']
[2025-11-25 20:33:01] 2025-11-26 01:32:56,360 | INFO     | PID=28855 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 20:33:01] 2025-11-26 01:32:56,360 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:33:01] 2025-11-26 01:32:56,360 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:33:01] 2025-11-26 01:32:56,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:33:01] 2025-11-26 01:32:56,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:33:01] 2025-11-26 01:32:56,361 | INFO     | [monitor] control thread has ended
[2025-11-25 20:33:01] 2025-11-26 01:33:00,807 | INFO     | all workflow threads have been joined
[2025-11-25 20:33:01] 2025-11-26 01:33:00,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:33:01] 2025-11-26 01:33:00,812 | INFO     | traces error code: 0
[2025-11-25 20:33:01] 2025-11-26 01:33:00,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:33:01] 2025-11-26 01:33:00,904 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:33:01] 2025-11-26 01:33:00,908 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:33:01] 2025-11-26 01:33:00,911 [wrapper] pilotpid: 28855
[2025-11-25 20:33:01] 2025-11-26 01:33:00,915 [wrapper] Pilot exit status: 0
[2025-11-25 20:33:01] 2025-11-26 01:33:00,931 [wrapper] pandaids: 6896219224
[2025-11-25 20:33:01] 2025-11-26 01:33:00,968 [wrapper] cleanup supervisor_pilot 22160 28856
[2025-11-25 20:33:01] 2025-11-26 01:33:00,971 [wrapper] Test setup, not cleaning
[2025-11-25 20:33:01] 2025-11-26 01:33:00,975 [wrapper] apfmon messages muted
[2025-11-25 20:33:01] 2025-11-26 01:33:00,979 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:33:01] 2025-11-26 01:33:00,983 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:33:01]  *** Error codes and diagnostics ***
[2025-11-25 20:33:01]     "exeErrorCode": 0,
[2025-11-25 20:33:01]     "exeErrorDiag": "",
[2025-11-25 20:33:01]     "pilotErrorCode": 0,
[2025-11-25 20:33:01]     "pilotErrorDiag": "",
[2025-11-25 20:33:01]  *** Listing of results directory ***
[2025-11-25 20:33:01] total 1302188
[2025-11-25 20:33:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 14:02 pilot3.tar.gz
[2025-11-25 20:33:01] -rwx------ 1 boincer umatlas     36292 Nov 24 14:51 runpilot2-wrapper.sh
[2025-11-25 20:33:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 14:51 queuedata.json
[2025-11-25 20:33:01] -rw-r--r-- 1 boincer umatlas       100 Nov 25 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:33:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 13:34 run_atlas
[2025-11-25 20:33:01] -rw-r--r-- 1 boincer umatlas       105 Nov 25 13:34 job.xml
[2025-11-25 20:33:01] -rw-r--r-- 2 boincer umatlas 408751915 Nov 25 13:34 EVNT.47483658._002060.pool.root.1
[2025-11-25 20:33:01] -rw-r--r-- 2 boincer umatlas    590099 Nov 25 13:34 input.tar.gz
[2025-11-25 20:33:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 13:34 start_atlas.sh
[2025-11-25 20:33:01] drwxrwx--x 2 boincer umatlas      4096 Nov 25 13:34 shared
[2025-11-25 20:33:01] -rw-r--r-- 1 boincer umatlas         0 Nov 25 13:34 boinc_lockfile
[2025-11-25 20:33:01] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 13:35 pandaJob.out
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas        57 Nov 25 13:35 setup.sh.local
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas    991543 Nov 25 13:35 agis_schedconf.cvmfs.json
[2025-11-25 20:33:01] drwx------ 5 boincer umatlas      4096 Nov 25 13:35 pilot3
[2025-11-25 20:33:01] -rw-r--r-- 1 boincer umatlas       533 Nov 25 20:24 boinc_task_state.xml
[2025-11-25 20:33:01] -rw-r--r-- 1 boincer umatlas      5955 Nov 25 20:30 init_data.xml
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas 909459288 Nov 25 20:31 HITS.47556161._000438.pool.root.1
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas      1064 Nov 25 20:32 memory_monitor_summary.json
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas        95 Nov 25 20:32 pilot_heartbeat.json
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas   1516240 Nov 25 20:32 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas   2158637 Nov 25 20:32 log.47556161._000438.job.log.tgz.1
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas      8663 Nov 25 20:32 heartbeat.json
[2025-11-25 20:33:01] -rw-r--r-- 1 boincer umatlas        29 Nov 25 20:32 wrapper_checkpoint.txt
[2025-11-25 20:33:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 20:32 boinc_mmap_file
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas      4746 Nov 25 20:33 pilotlog.txt
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas   3498718 Nov 25 20:33 log.47556161._000438.job.log.1
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas       353 Nov 25 20:33 output.list
[2025-11-25 20:33:01] -rw-r--r-- 1 boincer umatlas       620 Nov 25 20:33 runtime_log
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas   5672960 Nov 25 20:33 result.tar.gz
[2025-11-25 20:33:01] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 20:33 runtime_log.err
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas       670 Nov 25 20:33 rrqLDmulrh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmltLKDmLBzJMm.diag
[2025-11-25 20:33:01] -rw-r--r-- 1 boincer umatlas     21409 Nov 25 20:33 stderr.txt
[2025-11-25 20:33:01] HITS file was successfully produced:
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas 909459288 Nov 25 20:31 shared/HITS.pool.root.1
[2025-11-25 20:33:01]  *** Contents of shared directory: ***
[2025-11-25 20:33:01] total 1293456
[2025-11-25 20:33:01] -rw-r--r-- 2 boincer umatlas 408751915 Nov 25 13:34 ATLAS.root_0
[2025-11-25 20:33:01] -rw-r--r-- 2 boincer umatlas    590099 Nov 25 13:34 input.tar.gz
[2025-11-25 20:33:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 13:34 start_atlas.sh
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas 909459288 Nov 25 20:31 HITS.pool.root.1
[2025-11-25 20:33:01] -rw------- 1 boincer umatlas   5672960 Nov 25 20:33 result.tar.gz
20:33:03 (23552): run_atlas exited; CPU time 280793.043736
20:33:03 (23552): called boinc_finish(0)

</stderr_txt>
]]>

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